BLASTX nr result

ID: Anemarrhena21_contig00021659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00021659
         (300 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AIY60703.1| rhomboid protein Aspof_RBL14, partial [Asparagus ...    46   3e-08
gb|AIY60733.1| rhomboid protein Yucsm_RBL14, partial [Yucca fila...    44   1e-07

>gb|AIY60703.1| rhomboid protein Aspof_RBL14, partial [Asparagus officinalis]
          Length = 340

 Score = 46.2 bits (108), Expect(2) = 3e-08
 Identities = 27/61 (44%), Positives = 29/61 (47%)
 Frame = -2

Query: 185 IQSSF*SQCQRISGXXXXXXXXXXXXXXXXXRCTICTFYNLDWLDVSEMCRTECAGPGFP 6
           I+S F  Q QRISG                 RC +CTF N   LDV EMC TE  GP F 
Sbjct: 255 IRSLFWPQRQRISGRGTVGGSQGAWDASSVWRCEVCTFDNSGLLDVCEMCSTERGGPAFS 314

Query: 5   P 3
           P
Sbjct: 315 P 315



 Score = 38.1 bits (87), Expect(2) = 3e-08
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = -1

Query: 300 FVPGVSFLGHLRGILAGLCF 241
           FVPGVSFLGHL GILAGL +
Sbjct: 205 FVPGVSFLGHLGGILAGLVY 224


>gb|AIY60733.1| rhomboid protein Yucsm_RBL14, partial [Yucca filamentosa]
          Length = 365

 Score = 43.9 bits (102), Expect(2) = 1e-07
 Identities = 26/59 (44%), Positives = 29/59 (49%)
 Frame = -2

Query: 185 IQSSF*SQCQRISGXXXXXXXXXXXXXXXXXRCTICTFYNLDWLDVSEMCRTECAGPGF 9
           I+S F SQ QR+SG                 RC +CTF N   LDV EMC TE  G GF
Sbjct: 280 IRSLFRSQGQRLSGRGTVGGNRSVRRPSSVWRCPVCTFDNSGLLDVCEMCSTERGGGGF 338



 Score = 38.1 bits (87), Expect(2) = 1e-07
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = -1

Query: 300 FVPGVSFLGHLRGILAGLCF 241
           FVPGVSFLGHL GILAGL +
Sbjct: 229 FVPGVSFLGHLGGILAGLVY 248


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