BLASTX nr result

ID: Anemarrhena21_contig00020881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00020881
         (620 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008803690.1| PREDICTED: pentatricopeptide repeat-containi...    49   6e-08
ref|XP_009412888.1| PREDICTED: pentatricopeptide repeat-containi...    50   3e-06

>ref|XP_008803690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Phoenix dactylifera]
          Length = 339

 Score = 49.3 bits (116), Expect(3) = 6e-08
 Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
 Frame = -3

Query: 531 MVFDYAVELDYVSLTAYRK-FVLVGWR*LWIYILLWMHPNDVKLTVFSIVVSLKLLARV- 358
           +VFD+A ELD VS  +    +V VGW  +   IL+WMH + VKL  F++   LK  +   
Sbjct: 85  LVFDHAEELDEVSWNSLLSAYVRVGWPEVATNILVWMHRSGVKLNSFALGSILKACSGFN 144

Query: 357 --LRIRKQLKG-LGWTCLHLRFLIGSAMNYIFTKNG 259
               ++K L G +    L L   +GSAM  ++ KNG
Sbjct: 145 DSEEVQKMLHGCVVKVGLDLDIFVGSAMLDVYAKNG 180



 Score = 29.6 bits (65), Expect(3) = 6e-08
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 620 VVAIGSAQQVILPYFLIDMHPNCGKFDEAR 531
           VV  G A +  L   LIDM+  CG+ D+ R
Sbjct: 55  VVVSGLASRAFLTDLLIDMYSKCGRIDDVR 84



 Score = 24.3 bits (51), Expect(3) = 6e-08
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = -1

Query: 248 NPLIRRFSENEIETCTEIPVVALKLC*YDDEKNGAFKVGHLR-ASVLDACTSNKEFKFGK 72
           N LI  FS    + C  +   AL+L  + +      +      +SVL+AC   K FK GK
Sbjct: 201 NALIAGFSRLGTKQCNAVRFDALRL--FSEMLRRRMRPSKFTFSSVLEACNLIKAFKCGK 258


>ref|XP_009412888.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Musa acuminata subsp. malaccensis]
          Length = 805

 Score = 50.4 bits (119), Expect(2) = 3e-06
 Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
 Frame = -3

Query: 531 MVFDYAVELDYVSLTAYRK-FVLVGWR*LWIYILLWMHPNDVKLTVFSIVVSLKLLARVL 355
           +VFD+A ELD VS  +    +V VGW  + + IL+WMH + VKL  F++   LK  + + 
Sbjct: 178 LVFDHAEELDEVSWNSLLSAYVSVGWPEVAVNILVWMHRSGVKLNSFALGSILKACSGMR 237

Query: 354 ---RIRKQLKG-LGWTCLHLRFLIGSAMNYIFTKNG 259
               +R+ + G +    L L   +GSAM  ++ KNG
Sbjct: 238 DSDDVRRMMHGCVTKVGLDLDLFVGSAMLDMYAKNG 273



 Score = 27.7 bits (60), Expect(2) = 3e-06
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 620 VVAIGSAQQVILPYFLIDMHPNCGKFDEAR 531
           VV  G +++  L   L+DM+  CG  DE R
Sbjct: 148 VVVTGLSRRAFLTNSLMDMYSKCGMIDEVR 177


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