BLASTX nr result
ID: Anemarrhena21_contig00020113
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00020113
(1867 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008780950.1| PREDICTED: probable RNA-dependent RNA polyme... 763 0.0
ref|XP_010913557.1| PREDICTED: probable RNA-dependent RNA polyme... 760 0.0
ref|XP_009381640.1| PREDICTED: probable RNA-dependent RNA polyme... 717 0.0
ref|XP_010271987.1| PREDICTED: RNA-dependent RNA polymerase 2 [N... 688 0.0
ref|XP_008453109.1| PREDICTED: RNA-dependent RNA polymerase 2 [C... 676 0.0
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V... 673 0.0
gb|KDO69723.1| hypothetical protein CISIN_1g001183mg [Citrus sin... 669 0.0
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 668 0.0
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici... 667 0.0
ref|XP_010107450.1| RNA-dependent RNA polymerase 2 [Morus notabi... 667 0.0
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis... 666 0.0
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu... 665 0.0
ref|XP_011028594.1| PREDICTED: RNA-dependent RNA polymerase 2 [P... 660 0.0
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun... 658 0.0
ref|XP_010037577.1| PREDICTED: RNA-dependent RNA polymerase 2 [E... 657 0.0
ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependen... 656 0.0
ref|XP_008668575.1| PREDICTED: RNA-dependent DNA polymerase isof... 655 0.0
ref|NP_001183867.1| RNA-dependent DNA polymerase [Zea mays] gi|8... 655 0.0
ref|XP_012080102.1| PREDICTED: RNA-dependent RNA polymerase 2 is... 654 0.0
ref|XP_012080101.1| PREDICTED: RNA-dependent RNA polymerase 2 is... 654 0.0
>ref|XP_008780950.1| PREDICTED: probable RNA-dependent RNA polymerase 2 [Phoenix
dactylifera]
Length = 1117
Score = 763 bits (1969), Expect = 0.0
Identities = 375/547 (68%), Positives = 446/547 (81%), Gaps = 4/547 (0%)
Frame = -2
Query: 1866 SHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNRE 1687
SHTPSAFQIRYGGYKGVIAVDRTSF KLSLRPSMLKF+S NTML VTK SE PC+LNRE
Sbjct: 563 SHTPSAFQIRYGGYKGVIAVDRTSFQKLSLRPSMLKFESENTMLCVTKWSEYLPCYLNRE 622
Query: 1686 IISLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVKTAVKILMHGCR 1507
II LLSTLG++DE+FE +QHDQM LLD MLTNRE ALR+L +++ +T VK+LM G
Sbjct: 623 IICLLSTLGIEDEVFESMQHDQMSLLDEMLTNREIALRMLDKMAFPDTRTTVKMLMQGYE 682
Query: 1506 PDAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQE 1327
P++EPYL+MMLKAYR+YQLSDIRSKCRIFVPKGRVL+GCLDE G+L+YGQ+Y++VT+T+E
Sbjct: 683 PNSEPYLLMMLKAYREYQLSDIRSKCRIFVPKGRVLLGCLDETGSLDYGQIYVKVTMTKE 742
Query: 1326 ELQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLIF 1147
ELQ+ + F KVDQ+ +NPCLHPGD+R++QAVY+P+LDN MGLVDC++F
Sbjct: 743 ELQHTYETCFDKVDQTAAVVVQKVVVTRNPCLHPGDVRILQAVYNPQLDN-MGLVDCIVF 801
Query: 1146 PQKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVHK 967
PQKG RPHPNECSGGDLDGDL+ VCWDEKLIPPK + PM+Y ARR R DH VTLEE+ K
Sbjct: 802 PQKGRRPHPNECSGGDLDGDLYFVCWDEKLIPPKMDTPMDYNARRQRHTDHDVTLEEIQK 861
Query: 966 FFIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSAL 787
FF+DYMIND LG I+TAHLV+ADSEP KA S KCL+LA LHSMAVD+AK G+ AEMP L
Sbjct: 862 FFVDYMINDTLGIISTAHLVYADSEPGKAQSPKCLELANLHSMAVDFAKTGSSAEMPRIL 921
Query: 786 RPRQFPDFMERSEKRSYKSTGVLGKLYRAVTSHSESNQNYINNICEAIP---YDCDLEVD 616
+P+ FPDFMER ++ Y STGVLGKLYRA + H E N E +P YD DLE+
Sbjct: 922 KPKMFPDFMERWDRTMYVSTGVLGKLYRAASRHIE-RPNTDPMDAEMLPQSAYDHDLEIK 980
Query: 615 GFEAFLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKDR 439
GFEAFLEVAE+ Y QY+++L+SLMKYYG EHEDEILTG +RSR MYL DK+KY +MKDR
Sbjct: 981 GFEAFLEVAEDYYNQYSERLSSLMKYYGAEHEDEILTGNLRSRSMYLQRDKKKYGEMKDR 1040
Query: 438 VLIAVKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVML 259
+LI VKSLHKEV+GWF+++C ESE LRMA+AWYHVTYHP Y S +FLSFPW++ D +L
Sbjct: 1041 ILIGVKSLHKEVQGWFKSSCVESESLRMASAWYHVTYHPSY-YSENRFLSFPWILSDALL 1099
Query: 258 SLKNFKS 238
S+K KS
Sbjct: 1100 SIKASKS 1106
>ref|XP_010913557.1| PREDICTED: probable RNA-dependent RNA polymerase 2 [Elaeis
guineensis]
Length = 1117
Score = 760 bits (1963), Expect = 0.0
Identities = 372/547 (68%), Positives = 446/547 (81%), Gaps = 4/547 (0%)
Frame = -2
Query: 1866 SHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNRE 1687
SHTPSAFQIRYGGYKGVIAVDRTSF KLSLRPSMLKF+S NTML VTK SE PC+LNRE
Sbjct: 563 SHTPSAFQIRYGGYKGVIAVDRTSFQKLSLRPSMLKFESENTMLCVTKWSEYLPCYLNRE 622
Query: 1686 IISLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVKTAVKILMHGCR 1507
II LLSTLGV+DE+FE +QHDQM LLD MLTNRE LR+L +++ +T VK+LM G
Sbjct: 623 IICLLSTLGVEDEVFELMQHDQMSLLDEMLTNREITLRMLDKMAFPDARTVVKMLMQGYE 682
Query: 1506 PDAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQE 1327
P++EPYL+MMLKAYR+YQLSDIRSKCRIFVPKGRVL+GCLDE G+L+YGQVY+++T+T+E
Sbjct: 683 PNSEPYLLMMLKAYREYQLSDIRSKCRIFVPKGRVLLGCLDETGSLDYGQVYVKITMTKE 742
Query: 1326 ELQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLIF 1147
ELQ+ NQ F KVDQ+ +NPCLHPGD+RV+QAVY+P+LDN MGLVDC++F
Sbjct: 743 ELQDTNQTFFDKVDQTAAAVIQKVVVTRNPCLHPGDVRVLQAVYNPQLDN-MGLVDCIVF 801
Query: 1146 PQKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVHK 967
PQ+G RPHP+ECSGGDLDGDL+ VCWDEKLIPPKT+ PM+Y ARR R DH VTLEE+ K
Sbjct: 802 PQRGRRPHPSECSGGDLDGDLYFVCWDEKLIPPKTDTPMDYYARRQRHTDHDVTLEEIQK 861
Query: 966 FFIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSAL 787
FF+DYMIND LG I+TAHLV+AD EP+KA S KCLQLA LHSMAVD+AK G+ AEMP L
Sbjct: 862 FFVDYMINDTLGVISTAHLVYADREPAKARSPKCLQLANLHSMAVDFAKTGSSAEMPRIL 921
Query: 786 RPRQFPDFMERSEKRSYKSTGVLGKLYRAVTSHSESNQNYINNICEAIP---YDCDLEVD 616
RP++FPDFMER ++ Y STG+LGKLYR+ +SH E + + E +P YD DL+V
Sbjct: 922 RPKEFPDFMERWDRPMYVSTGILGKLYRSASSHIERPNTDLMD-AEMLPQSAYDYDLQVS 980
Query: 615 GFEAFLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKDR 439
GFEAFLEVAE+ Y+++L+SLM YYG EHEDEILTG +RSR MYL DK+KY +MKDR
Sbjct: 981 GFEAFLEVAEDYRNMYSERLSSLMNYYGAEHEDEILTGNLRSRSMYLQRDKKKYGEMKDR 1040
Query: 438 VLIAVKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVML 259
+L+ VKSLHKEV+GWF+ +C ESE LRMA+AWYHVTYHP Y S +FLSFPW++ D +L
Sbjct: 1041 ILLGVKSLHKEVQGWFKRSCAESESLRMASAWYHVTYHPSY-YSENRFLSFPWILSDALL 1099
Query: 258 SLKNFKS 238
S+K KS
Sbjct: 1100 SIKASKS 1106
>ref|XP_009381640.1| PREDICTED: probable RNA-dependent RNA polymerase 2 [Musa acuminata
subsp. malaccensis]
Length = 1106
Score = 717 bits (1851), Expect = 0.0
Identities = 353/542 (65%), Positives = 429/542 (79%), Gaps = 1/542 (0%)
Frame = -2
Query: 1863 HTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREI 1684
+TPSAFQIRYGGYKGVIA+DRTSF KLSLR SMLKF+S NTML+VTK SE PCFLNREI
Sbjct: 564 NTPSAFQIRYGGYKGVIAIDRTSFWKLSLRKSMLKFESTNTMLSVTKWSEYLPCFLNREI 623
Query: 1683 ISLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVKTAVKILMHGCRP 1504
I LLSTLG+ DEIFE +QHDQM L MLT++E ALRVL R++GS V+TA+K+LM G P
Sbjct: 624 ICLLSTLGIKDEIFESMQHDQMQQLGKMLTDKEVALRVLDRMTGSEVRTAIKMLMQGYDP 683
Query: 1503 DAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQEE 1324
++EPYL MMLKA RDYQLSD RSKCRIFVPKGRVLIGCLDE L+YGQ Y++VT+T+EE
Sbjct: 684 NSEPYLSMMLKASRDYQLSDTRSKCRIFVPKGRVLIGCLDETCNLDYGQAYIKVTMTKEE 743
Query: 1323 LQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLIFP 1144
LQN +Q + DQ+ +NPCLHPGDIRV+QAVYD LD+ MGLVDC+IFP
Sbjct: 744 LQNEDQTFLRNTDQTSAVVVGKVVVTRNPCLHPGDIRVLQAVYDVGLDD-MGLVDCIIFP 802
Query: 1143 QKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVHKF 964
QKG RPHPNECSGGDLDGDL+ VCWD+ LIPP+T+ PM+Y RR RLMDH VTLEE+ KF
Sbjct: 803 QKGTRPHPNECSGGDLDGDLYFVCWDKNLIPPETDTPMDYTPRRPRLMDHDVTLEEIQKF 862
Query: 963 FIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSALR 784
F+DYMIND LG I+T HL++ADSEP+KA S KCL+LA LHS AVD+AK GAPAEMP LR
Sbjct: 863 FVDYMINDTLGVISTTHLIYADSEPTKARSPKCLELANLHSEAVDFAKTGAPAEMPRVLR 922
Query: 783 PRQFPDFMERSEKRSYKSTGVLGKLYRAVTSHSESNQNYINNICEAIPYDCDLEVDGFEA 604
P++FPDFMER ++ ++ S GV+GKLYRA + H E + N I + YD DL+V+GFE
Sbjct: 923 PKEFPDFMERWDRSTFISPGVIGKLYRAASIHFE-DVNSDATISKVSAYDYDLQVEGFEE 981
Query: 603 FLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKDRVLIA 427
FL A+E Y +Y++KL+ LM YYG EHEDEILTG +R++ +YL DK++Y +MKDR+L+
Sbjct: 982 FLSPAKEYYDRYSEKLSLLMNYYGAEHEDEILTGNLRNKSLYLQKDKKRYGEMKDRMLVG 1041
Query: 426 VKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVMLSLKN 247
V+SL +EVEGWFR +C E + RMA+AWYHVTYH Y T FLSFPW++ DV+L++K
Sbjct: 1042 VRSLQQEVEGWFRCSCAERDSSRMASAWYHVTYHRDYHPE-TTFLSFPWILSDVLLNIKA 1100
Query: 246 FK 241
K
Sbjct: 1101 VK 1102
>ref|XP_010271987.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nelumbo nucifera]
gi|720051127|ref|XP_010271988.1| PREDICTED: RNA-dependent
RNA polymerase 2 [Nelumbo nucifera]
Length = 1115
Score = 688 bits (1775), Expect = 0.0
Identities = 339/546 (62%), Positives = 419/546 (76%), Gaps = 4/546 (0%)
Frame = -2
Query: 1866 SHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNRE 1687
S TPSAFQIRYGGYKGVIAVDR SFCKLSLRPSMLKF SN+ LNVTK SES PC+LNRE
Sbjct: 568 SQTPSAFQIRYGGYKGVIAVDRNSFCKLSLRPSMLKFDSNDRTLNVTKWSESMPCYLNRE 627
Query: 1686 IISLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVKTAVKILMHGCR 1507
I+SLLSTLGV+DE FE LQ Q+ LLD MLTNRE AL VL +G VK+L+HG
Sbjct: 628 IVSLLSTLGVEDEKFEMLQCKQISLLDKMLTNREAALDVLECTAGDAKTVLVKMLLHGYE 687
Query: 1506 PDAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQE 1327
P EPYL M+L+A+R++QLSDIRSKCRI VPKGRVL+GCLDE G L YGQV++RVT+T+
Sbjct: 688 PGVEPYLSMILRAHREHQLSDIRSKCRILVPKGRVLLGCLDETGILNYGQVFIRVTMTKA 747
Query: 1326 ELQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLIF 1147
E + +Q+ F +VD++ KNPCLHPGDIRV+ A+Y+ L+ GLVDCL+F
Sbjct: 748 EQCHDDQSFFHQVDETTSIVIGKVVITKNPCLHPGDIRVLDAIYESALEE-KGLVDCLVF 806
Query: 1146 PQKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVHK 967
PQKG RPHPNECSGGDLDGDLF VCWDE LIP +T+ PM+YI RR+RLMDH+VTLEE+ K
Sbjct: 807 PQKGERPHPNECSGGDLDGDLFFVCWDENLIPSQTDTPMDYIGRRSRLMDHEVTLEEIQK 866
Query: 966 FFIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSAL 787
+F++YMIND LG I+TAH++HAD EPSKA S KCLQLA LHSMAVD+AK GAPAEMP L
Sbjct: 867 YFVNYMINDTLGVISTAHVIHADREPSKARSPKCLQLAALHSMAVDFAKTGAPAEMPRVL 926
Query: 786 RPRQFPDFMERSEKRSYKSTGVLGKLYRAV---TSHSESNQNYINNICEAIPYDCDLEVD 616
+P+++PDFMER ++ Y S G+LGKLYR+ T + E + + + +A YD DLEV
Sbjct: 927 KPKEYPDFMERGDRPMYASPGILGKLYRSTIDSTKNQEPDFVWNEEVAQA-AYDKDLEVR 985
Query: 615 GFEAFLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKDR 439
GFE+F+E AE Y +KL++LM YYG EDEILTG +RS + L DK +Y +MKDR
Sbjct: 986 GFESFVETAESHKKLYTEKLSTLMNYYGARSEDEILTGNLRSPSLCLQRDKIRYGEMKDR 1045
Query: 438 VLIAVKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVML 259
VLIAV++L KE +GWF ++C+ E +MA+AWYHVTYHPKY +G LSFPW++ D++L
Sbjct: 1046 VLIAVRNLQKEAKGWFHSSCKSHECHKMASAWYHVTYHPKYCHNGMNSLSFPWILDDILL 1105
Query: 258 SLKNFK 241
++K+ K
Sbjct: 1106 NIKSVK 1111
>ref|XP_008453109.1| PREDICTED: RNA-dependent RNA polymerase 2 [Cucumis melo]
Length = 1117
Score = 676 bits (1743), Expect = 0.0
Identities = 339/549 (61%), Positives = 407/549 (74%), Gaps = 5/549 (0%)
Frame = -2
Query: 1866 SHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNRE 1687
+H PSAFQIRYGGYKGVIAVDR SF KLSLR SMLKF+S N MLNVTKC +S PC+LNRE
Sbjct: 567 NHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMLKFESKNKMLNVTKCCDSMPCYLNRE 626
Query: 1686 IISLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVKTA-VKILMHGC 1510
I++LLSTLGV DE FE LQ +Q+HLL MLT++ AL VL + G+ V++L HG
Sbjct: 627 IVTLLSTLGVKDESFEALQQEQLHLLKRMLTDKAVALNVLENLHGADSNNILVQMLNHGY 686
Query: 1509 RPDAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQ 1330
P+ EPYL MML+A+ SD+RS+CRIFVPKGR+L+GCLDE G L YGQVY +TLT+
Sbjct: 687 EPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTK 746
Query: 1329 EELQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLI 1150
ELQN NQ F +D++ KNPCLHPGD+RV++A++ +L+ GLVDCLI
Sbjct: 747 SELQNRNQNYFHTIDETKSILIGKVVVTKNPCLHPGDVRVLEAIFHVELEEK-GLVDCLI 805
Query: 1149 FPQKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVH 970
FPQKGPRPH NECSGGDLDGDL+ + WDE LIPPKTEAPM+Y RR R+MDH VTLEE+
Sbjct: 806 FPQKGPRPHTNECSGGDLDGDLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQ 865
Query: 969 KFFIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSA 790
KFF+DYMIND LGAI+TAHLVHAD EP KALS KCL+LA LHSMAVD+AK GAPAEMP
Sbjct: 866 KFFVDYMINDTLGAISTAHLVHADREPKKALSAKCLELAALHSMAVDFAKTGAPAEMPRV 925
Query: 789 LRPRQFPDFMERSEKRSYKSTGVLGKLYRAVTSHSESNQN---YINNICEAIPYDCDLEV 619
L+PR+FPDFMER +K Y S+ VLGKLYRA E ++ + AI YD DLEV
Sbjct: 926 LKPREFPDFMERFDKPMYISSNVLGKLYRAAIKSIEQERSRLVWSEEAARAI-YDHDLEV 984
Query: 618 DGFEAFLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKD 442
DGFEAFLE+AE Y +K++ LM YYG E+EDEIL G +RSR YL D RKY DMKD
Sbjct: 985 DGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKD 1044
Query: 441 RVLIAVKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVM 262
R+L++VKSL KEV+ WF N+C + MA+AWYHVTYHP Y + SFPW + DV+
Sbjct: 1045 RILLSVKSLRKEVKEWFENSCDPHQRRMMASAWYHVTYHPSYFKEDMFYFSFPWAVSDVL 1104
Query: 261 LSLKNFKSQ 235
L++K S+
Sbjct: 1105 LNIKATNSK 1113
>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
gi|297733815|emb|CBI15062.3| unnamed protein product
[Vitis vinifera]
Length = 1127
Score = 673 bits (1737), Expect = 0.0
Identities = 341/562 (60%), Positives = 420/562 (74%), Gaps = 4/562 (0%)
Frame = -2
Query: 1860 TPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREII 1681
TPSAFQIRYGGYKGVIAVDR SF KLSLR SMLKF+S N MLNVTK SES PC+LNREI+
Sbjct: 569 TPSAFQIRYGGYKGVIAVDRNSFRKLSLRSSMLKFESQNRMLNVTKWSESTPCYLNREIV 628
Query: 1680 SLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVKTAV-KILMHGCRP 1504
SLLSTLGV+DE FE L ++QMHLLD MLTNR+ AL VL + G K + K+L+ G P
Sbjct: 629 SLLSTLGVEDENFEALLNEQMHLLDKMLTNRQAALDVLESMGGIDNKNILAKMLLQGYEP 688
Query: 1503 DAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQEE 1324
+ EPYL MML+AYR+ QLSDIR++CRIFVPK RVLIGCLDE G L YGQVY+RVT+T+ E
Sbjct: 689 NVEPYLSMMLQAYRESQLSDIRTRCRIFVPKARVLIGCLDETGILNYGQVYVRVTMTKAE 748
Query: 1323 LQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLIFP 1144
+ NQ+ FQKVD + KNPCLHPGDIRV+ AVY+ +L+ GLVDC++FP
Sbjct: 749 HKCRNQSFFQKVDDTTSVVIGKVIVTKNPCLHPGDIRVLDAVYEVELEEK-GLVDCILFP 807
Query: 1143 QKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVHKF 964
QKG RPHPNECSGGDLDGD F +CWDE LIP +TEAPM+Y +RR R+MDH VTLEE+ KF
Sbjct: 808 QKGERPHPNECSGGDLDGDQFFICWDEGLIPSQTEAPMDYTSRRPRIMDHDVTLEEIQKF 867
Query: 963 FIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSALR 784
F+DYMIND LG I+TAHLVHAD EP KA S KCL+LA LHSMAVD+AK GAPAEMP L+
Sbjct: 868 FVDYMINDTLGVISTAHLVHADREPEKARSKKCLELATLHSMAVDFAKTGAPAEMPRVLK 927
Query: 783 PRQFPDFMERSEKRSYKSTGVLGKLYRA-VTSHSESNQNYI-NNICEAIPYDCDLEVDGF 610
P++FPDFMER +K Y S G LGKLYRA + S +++ + YD DLEVDGF
Sbjct: 928 PKEFPDFMERVDKPMYISNGALGKLYRATIASRVNEKSSFVWSGTIPGAAYDHDLEVDGF 987
Query: 609 EAFLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKDRVL 433
E FLE+A+ YA+K+ +LM +YG E EDE+LTG +R++ MYL D R++ +MKDR+L
Sbjct: 988 ETFLEIAKLHKEMYAEKMATLMNFYGAESEDEMLTGNLRNKLMYLQRDNRRFTEMKDRIL 1047
Query: 432 IAVKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVMLSL 253
I+VKSL KE + W +C+ + +MA+AWYHVTYH +S+ FLSFPW++ +V+L +
Sbjct: 1048 ISVKSLQKEAKEWLYGSCKPHQHQKMASAWYHVTYHSTFSSQTPNFLSFPWIVGEVLLVI 1107
Query: 252 KNFKSQ*ELGKGEDVELDCKHQ 187
K+ S+ K E + +C Q
Sbjct: 1108 KSANSR----KAETSKDNCIQQ 1125
>gb|KDO69723.1| hypothetical protein CISIN_1g001183mg [Citrus sinensis]
Length = 1131
Score = 669 bits (1726), Expect = 0.0
Identities = 335/549 (61%), Positives = 412/549 (75%), Gaps = 5/549 (0%)
Frame = -2
Query: 1866 SHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNRE 1687
SHTPSAFQIRYGGYKGVIAVDR SF KLSLR SMLKF+S N MLNVTK SES PCFLNRE
Sbjct: 583 SHTPSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESRNRMLNVTKWSESMPCFLNRE 642
Query: 1686 IISLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVKTA-VKILMHGC 1510
IISLLSTLGV DE+FE +Q Q+ LL ML NRE AL VL +++G K VK+L+ G
Sbjct: 643 IISLLSTLGVKDEVFEAMQQQQLILLGKMLINREAALDVLQKLNGVDSKNILVKMLLQGY 702
Query: 1509 RPDAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQ 1330
P+ EPYL MML ++ + QLSD++S+CRI+VPKGR+LIGC DE G L YGQV++RVT+T+
Sbjct: 703 EPNVEPYLSMMLLSHHENQLSDLKSRCRIYVPKGRLLIGCFDETGILNYGQVFVRVTMTR 762
Query: 1329 EELQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLI 1150
EEL++ +Q+ F +VD KNPCLHPGD+RV++AVY+ KL+ VDC+I
Sbjct: 763 EELESKDQSFFHRVDDKTSIVKGKVLVTKNPCLHPGDVRVLEAVYEMKLEEK-DYVDCII 821
Query: 1149 FPQKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVH 970
FPQKG RPHPNECSGGDLDGD+F + WD LIP +TE PM+Y RR+R+MDH VTLEE+H
Sbjct: 822 FPQKGERPHPNECSGGDLDGDIFFISWDNDLIPCETEPPMDYTGRRSRIMDHDVTLEEIH 881
Query: 969 KFFIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSA 790
KFF+DYMIND LGAI+TAHLVHAD +P KA S+KCL LA LHSMAVD+AK GAPAEMP A
Sbjct: 882 KFFVDYMINDTLGAISTAHLVHADRDPDKARSSKCLHLATLHSMAVDFAKTGAPAEMPLA 941
Query: 789 LRPRQFPDFMERSEKRSYKSTGVLGKLYRAVTS---HSESNQNYINNICEAIPYDCDLEV 619
L+P++FPDFMER +K Y S GVLGKLYRA SN + I EA YD DLEV
Sbjct: 942 LKPKEFPDFMEREDKPRYISFGVLGKLYRATLDSIMQIRSNAIWSEKIAEA-SYDHDLEV 1000
Query: 618 DGFEAFLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKD 442
DGFEAFL VAE Y +++N+LM YYG EDEILTG +R+R YL D R+Y DMKD
Sbjct: 1001 DGFEAFLGVAESHKEMYEEEMNALMNYYGASTEDEILTGNLRNRASYLQRDNRRYGDMKD 1060
Query: 441 RVLIAVKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVM 262
R+L++ K+L E + WF ++C+E+E ++A+AWYHVTY P Y LSFPW++ D++
Sbjct: 1061 RILLSAKNLQNEAKEWFGSSCKENEHPQLASAWYHVTYSPSYCKERMALLSFPWIVGDIL 1120
Query: 261 LSLKNFKSQ 235
L++K+ S+
Sbjct: 1121 LNIKSVNSR 1129
>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
Length = 1131
Score = 668 bits (1723), Expect = 0.0
Identities = 334/549 (60%), Positives = 412/549 (75%), Gaps = 5/549 (0%)
Frame = -2
Query: 1866 SHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNRE 1687
SHTPSAFQIRYGGYKGVIAVDR SF KLSLR SMLKF+S N MLNVTK SES PCFLNRE
Sbjct: 583 SHTPSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESRNRMLNVTKWSESMPCFLNRE 642
Query: 1686 IISLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVKTA-VKILMHGC 1510
IISLLSTLGV D++FE +Q Q+ LL ML NRE AL VL +++G K VK+L+ G
Sbjct: 643 IISLLSTLGVKDDVFEAMQQQQLILLGKMLINREAALDVLQKLNGVDSKNILVKMLLQGY 702
Query: 1509 RPDAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQ 1330
P+ EPYL MML ++ + QLSD++S+CRI+VPKGR+LIGC DE G L YGQV++RVT+T+
Sbjct: 703 EPNVEPYLSMMLLSHHENQLSDLKSRCRIYVPKGRLLIGCFDETGILNYGQVFVRVTMTR 762
Query: 1329 EELQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLI 1150
EEL++ +Q+ F +VD KNPCLHPGD+RV++AVY+ KL+ VDC+I
Sbjct: 763 EELESKDQSFFHRVDDKTSIVKGKVLVTKNPCLHPGDVRVLEAVYEMKLEEK-DYVDCII 821
Query: 1149 FPQKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVH 970
FPQKG RPHPNECSGGDLDGD+F + WD LIP +TE PM+Y RR+R+MDH VTLEE+H
Sbjct: 822 FPQKGERPHPNECSGGDLDGDIFFISWDNDLIPCETEPPMDYTGRRSRIMDHDVTLEEIH 881
Query: 969 KFFIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSA 790
KFF+DYMIND LGAI+TAHLVHAD +P KA S+KCL LA LHSMAVD+AK GAPAEMP A
Sbjct: 882 KFFVDYMINDTLGAISTAHLVHADRDPDKARSSKCLHLATLHSMAVDFAKTGAPAEMPLA 941
Query: 789 LRPRQFPDFMERSEKRSYKSTGVLGKLYRAVTS---HSESNQNYINNICEAIPYDCDLEV 619
L+P++FPDFMER +K Y S GVLGKLYRA SN + I EA YD DLEV
Sbjct: 942 LKPKEFPDFMEREDKPRYISFGVLGKLYRATLDSIMQIRSNAIWSEKIAEA-SYDHDLEV 1000
Query: 618 DGFEAFLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKD 442
DGFEAFL VAE Y +++N+LM YYG EDEILTG +R+R YL D R+Y DMKD
Sbjct: 1001 DGFEAFLGVAESHKEMYEEEMNALMNYYGASTEDEILTGNLRNRASYLQRDNRRYGDMKD 1060
Query: 441 RVLIAVKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVM 262
R+L++ K+L E + WF ++C+E+E ++A+AWYHVTY P Y LSFPW++ D++
Sbjct: 1061 RILLSAKNLQNEAKEWFGSSCKENEHPQLASAWYHVTYSPSYCKERMALLSFPWIVGDIL 1120
Query: 261 LSLKNFKSQ 235
L++K+ S+
Sbjct: 1121 LNIKSVNSR 1129
>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223550546|gb|EEF52033.1| RNA-dependent RNA polymerase,
putative [Ricinus communis]
Length = 983
Score = 667 bits (1722), Expect = 0.0
Identities = 336/549 (61%), Positives = 413/549 (75%), Gaps = 5/549 (0%)
Frame = -2
Query: 1866 SHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNRE 1687
+ TPSAFQIRYGGYKGVIAVDR SF KLSLR SM KF+S N MLNVTK SES PC+LNRE
Sbjct: 417 NRTPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMCKFESENRMLNVTKWSESMPCYLNRE 476
Query: 1686 IISLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVKTA-VKILMHGC 1510
II+LL+TLGV DEIFE LQ Q+ LL+ MLTNRE AL VL ++ + K +K+L+ G
Sbjct: 477 IITLLTTLGVKDEIFEGLQQQQLQLLNRMLTNRESALNVLENLAWANCKNILIKMLVQGY 536
Query: 1509 RPDAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQ 1330
P+ EPYL MML+AY + L ++RS+CRIFVPKGR+LIGCLDE L+YGQVY+R+T+T+
Sbjct: 537 EPNVEPYLSMMLQAYHENLLVELRSRCRIFVPKGRILIGCLDETRILDYGQVYVRITMTK 596
Query: 1329 EELQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLI 1150
ELQ+ +QA F +VD++ KNPCLHPGDIRV++AVY+ +L+ GLVDC++
Sbjct: 597 AELQDADQASFHRVDETTAVVTGKVIVTKNPCLHPGDIRVLEAVYEVELEEK-GLVDCIL 655
Query: 1149 FPQKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVH 970
FPQKG RPHPNECSGGDLDGD F + WD+ LIP +TE+PM+Y RR R MDH VTLEE+
Sbjct: 656 FPQKGERPHPNECSGGDLDGDQFFISWDKGLIPGETESPMDYQGRRPRKMDHDVTLEEIQ 715
Query: 969 KFFIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSA 790
KFFIDYMIND LGAI+TAHLVHAD EP KA S+KCLQLA+LHSMAVD+AK GAPAEMP A
Sbjct: 716 KFFIDYMINDTLGAISTAHLVHADREPDKARSSKCLQLAELHSMAVDFAKTGAPAEMPKA 775
Query: 789 LRPRQFPDFMERSEKRSYKSTGVLGKLYRAV---TSHSESNQNYINNICEAIPYDCDLEV 619
L+P++FPDFMER +K+ Y S GVLGKLYR T S + NI EA YD DLEV
Sbjct: 776 LKPKEFPDFMERIDKKMYISGGVLGKLYRGTLDSTRQQRSKFVWTENIAEA-TYDHDLEV 834
Query: 618 DGFEAFLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKD 442
GFE F+E+A Y +KL+ LM YY + EDEILTG ++++ MYL D R+Y D KD
Sbjct: 835 KGFEEFVEIAISHKDMYVEKLSGLMDYYEAKKEDEILTGNLQNKAMYLQRDNRRYGDTKD 894
Query: 441 RVLIAVKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVM 262
R+LI+VKSL KE + WF + CQ E R+A+AWYHVTYHP Y G LSFPW++ D++
Sbjct: 895 RILISVKSLQKEAKEWFESCCQAKEKQRLASAWYHVTYHPSYFQEGITCLSFPWIVADIL 954
Query: 261 LSLKNFKSQ 235
L++K+ S+
Sbjct: 955 LNIKSANSK 963
>ref|XP_010107450.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
gi|587928851|gb|EXC16034.1| RNA-dependent RNA polymerase
2 [Morus notabilis]
Length = 1115
Score = 667 bits (1720), Expect = 0.0
Identities = 334/547 (61%), Positives = 409/547 (74%), Gaps = 5/547 (0%)
Frame = -2
Query: 1860 TPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREII 1681
TPSAFQIRYGGYKGVIAV+R+SF KLSLR SMLKF+S+N MLNVTK S S PC+LNREI+
Sbjct: 567 TPSAFQIRYGGYKGVIAVNRSSFRKLSLRSSMLKFESSNRMLNVTKWSGSMPCYLNREIV 626
Query: 1680 SLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVKTA-VKILMHGCRP 1504
SLLS+LGV DE F L +Q+ LL M TNRE AL VL ++GS VK+L+ G P
Sbjct: 627 SLLSSLGVKDESFLALLREQLLLLGKMRTNREAALNVLENLNGSDSSNILVKMLLQGYEP 686
Query: 1503 DAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQEE 1324
+AEPYL MM+++Y + QLSD++++CRIFVPKG+VLIGCLDE G LEYGQVY+R+T+ + E
Sbjct: 687 NAEPYLSMMIQSYYENQLSDLKTRCRIFVPKGKVLIGCLDETGILEYGQVYVRLTMKKAE 746
Query: 1323 LQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLIFP 1144
L+ NQ+ F+KVD KNPCLHPGD+RV++AVYD KL+ GLVDCL+FP
Sbjct: 747 LEAGNQSFFRKVDDETSIVVGKVVVTKNPCLHPGDVRVLEAVYDAKLEEE-GLVDCLVFP 805
Query: 1143 QKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVHKF 964
QKG RPHPNECSGGDLDGDLF + WD LIPP+T APM+YI RR R+MDH VTLEE+ KF
Sbjct: 806 QKGERPHPNECSGGDLDGDLFFISWDTNLIPPRTTAPMDYIGRRPRIMDHDVTLEEIQKF 865
Query: 963 FIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSALR 784
F+DYMIND LG I+TAHL+HAD EP KA S CLQLA LHSMAVD+AK GAPAEMP ALR
Sbjct: 866 FVDYMINDTLGGISTAHLIHADREPEKAFSENCLQLATLHSMAVDFAKTGAPAEMPRALR 925
Query: 783 PRQFPDFMERSEKRSYKSTGVLGKLYRA-VTSHSESNQNYI--NNICEAIPYDCDLEVDG 613
PR +PDFMER ++ Y S G LGKLYRA V S S+ + N + EA YD DLEV+G
Sbjct: 926 PRDYPDFMERLDRPMYVSNGALGKLYRATVESESQGSSNLVWSEKTAEA-AYDRDLEVNG 984
Query: 612 FEAFLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKDRV 436
FE F+ +AE Y DK+N +M YY +E EDE+LTG +R R YL D R+Y ++KDR+
Sbjct: 985 FEEFIALAESHRDMYIDKMNGIMNYYELESEDEVLTGNLRKRAAYLQRDNRRYFEVKDRI 1044
Query: 435 LIAVKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVMLS 256
L+AVKSL +E +GWF +C+ E +MA+AWYHVTYHP Y LSFPW+ D++L+
Sbjct: 1045 LLAVKSLQREAKGWFEGSCEAMEQQKMASAWYHVTYHPNYYQKSINCLSFPWIKGDILLN 1104
Query: 255 LKNFKSQ 235
+K+ SQ
Sbjct: 1105 IKSINSQ 1111
>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
2 [Cucumis sativus] gi|700208501|gb|KGN63597.1|
hypothetical protein Csa_1G005580 [Cucumis sativus]
Length = 1117
Score = 666 bits (1719), Expect = 0.0
Identities = 335/549 (61%), Positives = 403/549 (73%), Gaps = 5/549 (0%)
Frame = -2
Query: 1866 SHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNRE 1687
+H PSAFQIRYGGYKGVIAVDR SF KLSLR SMLKF+S N MLNVTKC +S PC+LNRE
Sbjct: 567 NHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMLKFESKNKMLNVTKCCDSMPCYLNRE 626
Query: 1686 IISLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVKTA-VKILMHGC 1510
I +LLSTLGV DE FE LQ +Q+HLL MLT+++ AL VL G+ V++L HG
Sbjct: 627 IATLLSTLGVKDESFEALQQEQLHLLKRMLTDKDVALNVLENFHGADSNNILVQMLNHGY 686
Query: 1509 RPDAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQ 1330
P+ EPYL MML+A+ SD+RS+CRIFVPKGR+L+GCLDE G L YGQVY +TLT+
Sbjct: 687 EPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTK 746
Query: 1329 EELQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLI 1150
ELQ+ NQ F +D++ KNPCLHPGD+RV++A++ +L+ GLVDCLI
Sbjct: 747 SELQSRNQNYFHTIDETKSILLGKVVVTKNPCLHPGDVRVLEAIFHVELEEK-GLVDCLI 805
Query: 1149 FPQKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVH 970
FPQKG RPH NECSGGDLDGDL+ + WDE LIPPKTEAPM+Y RR R+MDH V LEE+
Sbjct: 806 FPQKGARPHTNECSGGDLDGDLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVKLEEIQ 865
Query: 969 KFFIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSA 790
KFF+DYMIND LGAI+TAHLVHAD EP KALS KCL+LA LHSMAVD+AK GAPAEMP
Sbjct: 866 KFFVDYMINDTLGAISTAHLVHADREPKKALSAKCLELAALHSMAVDFAKTGAPAEMPRV 925
Query: 789 LRPRQFPDFMERSEKRSYKSTGVLGKLYRAVTSHSESNQN---YINNICEAIPYDCDLEV 619
L+PR+FPDFMER +K Y S+ VLGKLYRA E ++ + AI YD DLEV
Sbjct: 926 LKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSIEQERSRLVWSEEAARAI-YDYDLEV 984
Query: 618 DGFEAFLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKD 442
DGFEAFLE+AE Y +K++ LM YYG E+EDEIL G +RSR YL D RKY DMKD
Sbjct: 985 DGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKD 1044
Query: 441 RVLIAVKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVM 262
R+L++VK+L KEV+ WF N+C MA+AWYHVTYHP Y + SFPW + DV+
Sbjct: 1045 RILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYHVTYHPSYFKEDMFYFSFPWAVSDVL 1104
Query: 261 LSLKNFKSQ 235
L++K S+
Sbjct: 1105 LNIKAMNSK 1113
>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
gi|222868578|gb|EEF05709.1| hypothetical protein
POPTR_0015s08500g [Populus trichocarpa]
Length = 1110
Score = 665 bits (1715), Expect = 0.0
Identities = 336/549 (61%), Positives = 412/549 (75%), Gaps = 5/549 (0%)
Frame = -2
Query: 1866 SHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNRE 1687
SHTPSAFQIRYGGYKGV+AVDR SF KLSLR SMLKF S N MLNVTK SES PC+LNRE
Sbjct: 562 SHTPSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFDSENRMLNVTKWSESMPCYLNRE 621
Query: 1686 IISLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVKTA-VKILMHGC 1510
IISLLSTLGV DEIF+ LQ Q++ L MLTN+E AL VL ++ + K V++L+ G
Sbjct: 622 IISLLSTLGVADEIFQALQQKQLYRLRKMLTNKESALDVLENLAWADSKNILVQMLLQGY 681
Query: 1509 RPDAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQ 1330
P+ EPYL MML+AY + L ++RS+CRIFVPKGR+LIGCLDE G L+YGQVY+R+T+T+
Sbjct: 682 EPNVEPYLSMMLQAYHENSLMELRSRCRIFVPKGRILIGCLDESGILDYGQVYVRITMTK 741
Query: 1329 EELQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLI 1150
ELQ +Q+ F+KVD+S KNPCLHPGDIRV++AVYD +L+ GLVDC+I
Sbjct: 742 AELQCCDQSFFRKVDESTSTIIGEVAVTKNPCLHPGDIRVLEAVYDVELEEK-GLVDCII 800
Query: 1149 FPQKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVH 970
FPQ G RPHPNECSGGDLDGD F + WDE L+P TEAPM+Y+ R R+MDH VTLEE+
Sbjct: 801 FPQNGGRPHPNECSGGDLDGDQFFISWDEGLLPCHTEAPMDYVGGRQRIMDHNVTLEEIQ 860
Query: 969 KFFIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSA 790
+FF+DYMIND LGAI+TAHLVHAD EP KA S KCLQLA LHSMAVD+AK GAPAEMP
Sbjct: 861 RFFVDYMINDTLGAISTAHLVHADCEPDKARSEKCLQLATLHSMAVDFAKTGAPAEMPLY 920
Query: 789 LRPRQFPDFMERSEKRSYKSTGVLGKLYRAV---TSHSESNQNYINNICEAIPYDCDLEV 619
L+PR+FPDFMER+EK+ Y S GVLGKLYR + T SN + I EA YD DLEV
Sbjct: 921 LKPREFPDFMERAEKQMYISDGVLGKLYRDIHDSTRQERSNFMWSKKIAEA-TYDQDLEV 979
Query: 618 DGFEAFLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKD 442
GFE FL +A +Y +K+++LM YYG + EDEILTG +R R YL D RKY D+KD
Sbjct: 980 KGFEDFLGIASIYKEKYMEKMSTLMDYYGAKTEDEILTGNLRHRPTYLQRDNRKYGDVKD 1039
Query: 441 RVLIAVKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVM 262
R+L+++K+L KE + WF ++C +E MA+AWYHVTYHP Y LSFPW++ D++
Sbjct: 1040 RILVSLKNLKKEAKEWFESSCNPTEHQCMASAWYHVTYHPTYFHERMNCLSFPWIVGDIL 1099
Query: 261 LSLKNFKSQ 235
L++K+ S+
Sbjct: 1100 LNIKSLNSR 1108
>ref|XP_011028594.1| PREDICTED: RNA-dependent RNA polymerase 2 [Populus euphratica]
Length = 1105
Score = 660 bits (1703), Expect = 0.0
Identities = 332/542 (61%), Positives = 408/542 (75%), Gaps = 2/542 (0%)
Frame = -2
Query: 1866 SHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNRE 1687
SHTPSAFQIRYGGYKGV+AVDR SF KLSLR SMLKF S N MLNVTK SES PC+LNRE
Sbjct: 562 SHTPSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFDSENRMLNVTKWSESMPCYLNRE 621
Query: 1686 IISLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVKTA-VKILMHGC 1510
IISLLSTLGV DEIF+ LQ Q++ L MLTN+E AL VL + + K V++L+ G
Sbjct: 622 IISLLSTLGVADEIFQALQQKQLYQLRKMLTNKESALDVLENLVWADSKNILVQMLLQGY 681
Query: 1509 RPDAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQ 1330
P+ EPYL MML+AY + L ++RS+CRIFVPKGR+LIGCLDE GTL+YGQVY+R+T+T+
Sbjct: 682 EPNVEPYLSMMLQAYHENSLMELRSRCRIFVPKGRILIGCLDESGTLDYGQVYVRITMTK 741
Query: 1329 EELQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLI 1150
ELQ +Q+ F+KVD+S KNPCLHPGDIRV++AVY+ +L+ GLVDC+I
Sbjct: 742 AELQCSDQSFFRKVDESTSIIIGEVAVTKNPCLHPGDIRVLEAVYNVELEEK-GLVDCII 800
Query: 1149 FPQKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVH 970
FPQ G RPHPNECSGGDLDGD F + WDE L+P TEAPM+Y+ R R++DH VTLEE+
Sbjct: 801 FPQNGGRPHPNECSGGDLDGDQFFISWDEGLLPCHTEAPMDYVGGRQRIVDHNVTLEEIQ 860
Query: 969 KFFIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSA 790
+FF+DYMIND LGAI+TAHLVHAD EP KA S KCLQLA LHSMAVD+AK GAPAEMP
Sbjct: 861 RFFVDYMINDTLGAISTAHLVHADCEPDKARSEKCLQLATLHSMAVDFAKTGAPAEMPLY 920
Query: 789 LRPRQFPDFMERSEKRSYKSTGVLGKLYRAVTSHSESNQNYINNICEAIPYDCDLEVDGF 610
L+PR+FPDFMER EK+ Y S GVLGKLYR + H + Q + EA YD DLEV GF
Sbjct: 921 LKPREFPDFMERVEKKMYISDGVLGKLYRDI--HDSTRQERSKKMAEA-TYDQDLEVKGF 977
Query: 609 EAFLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKDRVL 433
E FL +A +Y +K+++LM YYG + EDEILTG +R R YL D RKY D+KDR+L
Sbjct: 978 EDFLGIASIYKEKYMEKMSTLMDYYGAKTEDEILTGNLRHRPTYLQRDNRKYGDVKDRIL 1037
Query: 432 IAVKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVMLSL 253
+++K+L KE + WF ++C +E MA+AWYHVTYHP Y LSFPW++ D++L++
Sbjct: 1038 VSLKNLKKEAKEWFESSCDPTEHQCMASAWYHVTYHPTYFHERMNCLSFPWIVGDILLNI 1097
Query: 252 KN 247
K+
Sbjct: 1098 KS 1099
>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
gi|462407047|gb|EMJ12511.1| hypothetical protein
PRUPE_ppa000513mg [Prunus persica]
Length = 1118
Score = 658 bits (1697), Expect = 0.0
Identities = 332/542 (61%), Positives = 405/542 (74%), Gaps = 5/542 (0%)
Frame = -2
Query: 1860 TPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREII 1681
TPSAFQIRYGGYKGVIAVD SF KLSLR SMLKF+S N MLNVTK S++ PC+LNREII
Sbjct: 570 TPSAFQIRYGGYKGVIAVDCRSFRKLSLRSSMLKFESKNRMLNVTKWSDAMPCYLNREII 629
Query: 1680 SLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVK-TAVKILMHGCRP 1504
SLLSTLGV DE FE LQ +Q+ LL M T R AL V R++G+ K T VK+L+HG P
Sbjct: 630 SLLSTLGVKDETFEALQEEQLRLLGKMRTERGAALNVFERLNGADSKNTLVKMLLHGYEP 689
Query: 1503 DAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQEE 1324
+AEPYL MML+AY + LSD++S+CRIFVPKGRVL+GCLDE G L+YGQVY+R+T+T+ E
Sbjct: 690 NAEPYLSMMLQAYYENHLSDLKSRCRIFVPKGRVLVGCLDETGNLDYGQVYVRITMTKAE 749
Query: 1323 LQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLIFP 1144
+ +Q+ FQKVD++ KNPCLHPGD+RV+ AVYD L+ +VDCLIFP
Sbjct: 750 QEMGDQSFFQKVDETTLVVTGKVVVTKNPCLHPGDVRVLDAVYDVVLEEK-NMVDCLIFP 808
Query: 1143 QKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVHKF 964
QKG RPHPNECSGGDLDGDLF + WD+ L+P T PM+Y ARR R+MDH VTLEE+ KF
Sbjct: 809 QKGERPHPNECSGGDLDGDLFFISWDKDLVPSHTVPPMDYSARRPRIMDHTVTLEEIQKF 868
Query: 963 FIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSALR 784
F+DYMINDNLGAI+TAHLVHAD EP KAL+ KCLQLA LHSMAVD+AK GAPAEM L+
Sbjct: 869 FVDYMINDNLGAISTAHLVHADHEPDKALNPKCLQLADLHSMAVDFAKTGAPAEMSRTLK 928
Query: 783 PRQFPDFMERSEKRSYKSTGVLGKLYRAVTS---HSESNQNYINNICEAIPYDCDLEVDG 613
P++FPDFMER +K Y S G LGKLYRAV ++N + I EA YD DLEVDG
Sbjct: 929 PKEFPDFMERVDKPMYISNGALGKLYRAVVGSVLQEKTNLVWSEQIAEA-AYDQDLEVDG 987
Query: 612 FEAFLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKDRV 436
E+ LEVA+ Y +K+ ++M YYG EDEILTG +R+R YL D R+Y DMKDR+
Sbjct: 988 LESVLEVAKGHRDMYIEKMRTMMNYYGAVTEDEILTGNLRNRAAYLQRDNRRYGDMKDRI 1047
Query: 435 LIAVKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVMLS 256
+++K+L KE +G F ++C SE RMA+AWYHVTYHP Y LSFPW++ D++L+
Sbjct: 1048 SLSLKNLQKEAKGLFESSCPVSEHQRMASAWYHVTYHPSYFQQDMNCLSFPWIVGDILLN 1107
Query: 255 LK 250
+K
Sbjct: 1108 IK 1109
>ref|XP_010037577.1| PREDICTED: RNA-dependent RNA polymerase 2 [Eucalyptus grandis]
gi|629082860|gb|KCW49305.1| hypothetical protein
EUGRSUZ_K02861 [Eucalyptus grandis]
Length = 1130
Score = 657 bits (1695), Expect = 0.0
Identities = 326/541 (60%), Positives = 415/541 (76%), Gaps = 3/541 (0%)
Frame = -2
Query: 1860 TPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREII 1681
+PSAFQIRYGGYKGVIAVDR SF KLSLR SM KF+S+N MLNVT+ S S PC+LNREII
Sbjct: 583 SPSAFQIRYGGYKGVIAVDRRSFRKLSLRESMRKFESSNRMLNVTQWSNSLPCYLNREII 642
Query: 1680 SLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVKTAV-KILMHGCRP 1504
+LLSTL V+DE FE +Q Q+ +L MLT+RE AL VL +SG+ + + K+L+ G P
Sbjct: 643 TLLSTLEVEDEKFEAMQQKQLLILGKMLTDREAALSVLESLSGADRRNIIAKMLLAGYEP 702
Query: 1503 DAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQEE 1324
A+PYL+MML+A+ + QLS+++S+CRI +PKGR+L+GCLDE G L+YGQVY+RVT+T+ E
Sbjct: 703 TADPYLLMMLRAHHEIQLSELKSRCRIHIPKGRILLGCLDEAGILDYGQVYVRVTMTKAE 762
Query: 1323 LQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLIFP 1144
L++ Q F+KVD++ KNPCLHPGDIRV++AV++ +L+ + GLVDC+IFP
Sbjct: 763 LESGEQRFFRKVDETTAAVIGKVVVTKNPCLHPGDIRVLKAVFEVELEES-GLVDCIIFP 821
Query: 1143 QKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVHKF 964
+KG RPHPNECSGGDLDGDLF + WDE +IP TE PM+Y RR R+ DH VTLEE+HKF
Sbjct: 822 RKGERPHPNECSGGDLDGDLFFISWDEDIIPSHTETPMDYTGRRPRITDHDVTLEEIHKF 881
Query: 963 FIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSALR 784
F+DYMIND LGAI+TAHLVHAD E KA S KCLQLA LHSMAVD+AK GAPAEMP L+
Sbjct: 882 FVDYMINDTLGAISTAHLVHADREQEKARSEKCLQLATLHSMAVDFAKTGAPAEMPRVLK 941
Query: 783 PRQFPDFMERSEKRSYKSTGVLGKLYRAVTSHS-ESNQNYINNICEAIPYDCDLEVDGFE 607
PR+FPDFMER +K Y ST VLGKLYRA S E ++ ++ YD DLEVDGFE
Sbjct: 942 PREFPDFMERVDKPMYTSTNVLGKLYRATLELSLEKSKIIWSDETAREYYDHDLEVDGFE 1001
Query: 606 AFLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKDRVLI 430
AF++ A +Y +KL+ LM++YG E EDEILTG +R+R +YL D RKY DMKDR+ +
Sbjct: 1002 AFIDRAVTHRDKYMEKLSELMRFYGAESEDEILTGNLRNRAIYLQRDNRKYGDMKDRISL 1061
Query: 429 AVKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVMLSLK 250
+VK+LHKEV+GWF + C+ SE R+A+AWYHVTYHP + FLSFPW++ DV+L+++
Sbjct: 1062 SVKNLHKEVKGWFESGCEASERERLASAWYHVTYHPSFVHGSFNFLSFPWIVGDVLLTIR 1121
Query: 249 N 247
+
Sbjct: 1122 S 1122
>ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependent RNA polymerase 2
[Prunus mume]
Length = 1100
Score = 656 bits (1692), Expect = 0.0
Identities = 331/542 (61%), Positives = 405/542 (74%), Gaps = 5/542 (0%)
Frame = -2
Query: 1860 TPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREII 1681
TPSAFQIRYGGYKGVIAVD SF KLSLR SMLKF+S NTMLNVTK S++ PC+LNREII
Sbjct: 552 TPSAFQIRYGGYKGVIAVDCRSFRKLSLRSSMLKFESKNTMLNVTKWSDAMPCYLNREII 611
Query: 1680 SLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVK-TAVKILMHGCRP 1504
SL+STLGV DE FE LQ +Q+ LL M T R AL VL R++G+ K T VK+L+HG P
Sbjct: 612 SLMSTLGVKDETFEALQEEQLRLLGKMRTERGAALNVLERLNGADSKNTLVKMLLHGYEP 671
Query: 1503 DAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQEE 1324
+ EPYL MML+AY + LSD++S+CRIFVPKGRVL+GCLDE G L+YGQVY+R+T+T+ E
Sbjct: 672 NVEPYLSMMLQAYYENHLSDLKSRCRIFVPKGRVLVGCLDETGNLDYGQVYVRITMTKAE 731
Query: 1323 LQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLIFP 1144
+ +Q+ FQKVD++ KNPCLHPGD+RV+ AVYD L+ +VDCLIFP
Sbjct: 732 QEMGDQSFFQKVDETTCIVTGKVVVTKNPCLHPGDVRVLDAVYDVVLEEK-NMVDCLIFP 790
Query: 1143 QKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVHKF 964
QKG RPHPNECSGGDLDGDLF + WD+ L+P T PM+Y ARR R+MDH VTLEE+ KF
Sbjct: 791 QKGERPHPNECSGGDLDGDLFFISWDKDLVPSHTVPPMDYSARRPRIMDHTVTLEEIQKF 850
Query: 963 FIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSALR 784
F+DYMINDNLGAI+TAHLVHAD EP KAL+ KCLQLA LHSMAVD+AK GAPAEM L+
Sbjct: 851 FVDYMINDNLGAISTAHLVHADHEPDKALNPKCLQLADLHSMAVDFAKTGAPAEMSRTLK 910
Query: 783 PRQFPDFMERSEKRSYKSTGVLGKLYRAVTS---HSESNQNYINNICEAIPYDCDLEVDG 613
P++FPDFMER +K Y S G LGKLYRAV ++N + I EA YD DLEVDG
Sbjct: 911 PKEFPDFMERVDKPMYISNGALGKLYRAVVGSVLQEKTNLVWSEQIAEA-AYDQDLEVDG 969
Query: 612 FEAFLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKDRV 436
E+ LEVA+ Y +K+ ++M YG EDEILTG +R+R YL D R+Y DMKDR+
Sbjct: 970 LESVLEVAKGHRDTYIEKMRTIMNNYGAVTEDEILTGNLRNRAAYLQRDNRRYGDMKDRI 1029
Query: 435 LIAVKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVMLS 256
+++K+L KE +G F ++C SE RMA+AWYHVTYHP Y LSFPW++ D++L+
Sbjct: 1030 SLSLKNLQKEAKGMFESSCPVSEHQRMASAWYHVTYHPSYFQQDMNCLSFPWIVGDILLN 1089
Query: 255 LK 250
+K
Sbjct: 1090 IK 1091
>ref|XP_008668575.1| PREDICTED: RNA-dependent DNA polymerase isoform X1 [Zea mays]
Length = 1091
Score = 655 bits (1690), Expect = 0.0
Identities = 324/558 (58%), Positives = 406/558 (72%), Gaps = 1/558 (0%)
Frame = -2
Query: 1866 SHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNRE 1687
+H PSAFQIRYGGYKGVI +D TSF LSLRPSM KF+S +TMLN+T S+SQPC++NRE
Sbjct: 534 AHPPSAFQIRYGGYKGVITIDPTSFFNLSLRPSMKKFESKSTMLNITNWSKSQPCYVNRE 593
Query: 1686 IISLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVKTAVKILMHGCR 1507
IISLLSTLG+ DE+FE +Q D MH D MLTN+E AL VLG++ G KTA +L+ G
Sbjct: 594 IISLLSTLGIKDEVFESMQQDDMHESDGMLTNKEAALSVLGKIGGGDTKTAADMLLQGYE 653
Query: 1506 PDAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQE 1327
P +EPYL+M+LKA+R +L+DIR++C+I V KGRVLIGCLDE LEYGQVY+R+T +
Sbjct: 654 PSSEPYLLMILKAHRANRLTDIRTRCKIHVQKGRVLIGCLDETCKLEYGQVYIRITKNHK 713
Query: 1326 ELQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLIF 1147
E + Q F D KNPCLHPGD+RV++AVYDP LD GL+DC++F
Sbjct: 714 EQKYSEQPFFCNDDGKTAVIVGKVAITKNPCLHPGDVRVLEAVYDPGLD-ARGLIDCVVF 772
Query: 1146 PQKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVHK 967
PQ+G RPHPNECSGGDLDGDLF + WD+KLIP K +APM+Y A R R+MDH VTLEE+ K
Sbjct: 773 PQRGERPHPNECSGGDLDGDLFFITWDDKLIPEKVDAPMDYTATRPRIMDHAVTLEEIQK 832
Query: 966 FFIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSAL 787
F+ YMIND LGAI+TAHL+HAD +P KA S +C+QLA LHSMAVD+AK GAPAEMP AL
Sbjct: 833 HFVSYMINDTLGAISTAHLIHADRDPLKARSPECVQLAALHSMAVDFAKTGAPAEMPLAL 892
Query: 786 RPRQFPDFMERSEKRSYKSTGVLGKLYRAVTSHSESNQNYINNICEAIPYDCDLEVDGFE 607
RPR+FPDFMER E+ Y S GVLGKLYRA H E + + + YD DLEV GF+
Sbjct: 893 RPREFPDFMERWERPMYVSNGVLGKLYRAALRHEEDAEALLPAGPPSCVYDPDLEVAGFD 952
Query: 606 AFLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKDRVLI 430
FL+ AEE Y YA++L +LM YY E EDEILTG +R++ +YL D ++Y +MKDR++
Sbjct: 953 EFLDAAEERYEAYAERLGALMTYYSAEREDEILTGNIRNKLVYLRRDNKRYFEMKDRIIA 1012
Query: 429 AVKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVMLSLK 250
AV +LH EV GW R C+E + R+A+AWYHVTYHP +F SFPW+ICD +L++K
Sbjct: 1013 AVDALHAEVRGWLR-ACKEDDASRVASAWYHVTYHPDRRGE-KRFWSFPWIICDTLLAIK 1070
Query: 249 NFKSQ*ELGKGEDVELDC 196
+ + + V +DC
Sbjct: 1071 AARRCRKRVEDAAVPMDC 1088
>ref|NP_001183867.1| RNA-dependent DNA polymerase [Zea mays] gi|89473792|gb|ABD72708.1|
RNA-dependent RNA polymerase [Zea mays]
gi|374257933|gb|AEZ01781.1| RNA-dependent DNA polymerase
[Zea mays] gi|414586834|tpg|DAA37405.1| TPA: mediator of
paramutation1 [Zea mays]
Length = 1127
Score = 655 bits (1690), Expect = 0.0
Identities = 324/558 (58%), Positives = 406/558 (72%), Gaps = 1/558 (0%)
Frame = -2
Query: 1866 SHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNRE 1687
+H PSAFQIRYGGYKGVI +D TSF LSLRPSM KF+S +TMLN+T S+SQPC++NRE
Sbjct: 570 AHPPSAFQIRYGGYKGVITIDPTSFFNLSLRPSMKKFESKSTMLNITNWSKSQPCYVNRE 629
Query: 1686 IISLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVKTAVKILMHGCR 1507
IISLLSTLG+ DE+FE +Q D MH D MLTN+E AL VLG++ G KTA +L+ G
Sbjct: 630 IISLLSTLGIKDEVFESMQQDDMHESDGMLTNKEAALSVLGKIGGGDTKTAADMLLQGYE 689
Query: 1506 PDAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQE 1327
P +EPYL+M+LKA+R +L+DIR++C+I V KGRVLIGCLDE LEYGQVY+R+T +
Sbjct: 690 PSSEPYLLMILKAHRANRLTDIRTRCKIHVQKGRVLIGCLDETCKLEYGQVYIRITKNHK 749
Query: 1326 ELQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLIF 1147
E + Q F D KNPCLHPGD+RV++AVYDP LD GL+DC++F
Sbjct: 750 EQKYSEQPFFCNDDGKTAVIVGKVAITKNPCLHPGDVRVLEAVYDPGLD-ARGLIDCVVF 808
Query: 1146 PQKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVHK 967
PQ+G RPHPNECSGGDLDGDLF + WD+KLIP K +APM+Y A R R+MDH VTLEE+ K
Sbjct: 809 PQRGERPHPNECSGGDLDGDLFFITWDDKLIPEKVDAPMDYTATRPRIMDHAVTLEEIQK 868
Query: 966 FFIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSAL 787
F+ YMIND LGAI+TAHL+HAD +P KA S +C+QLA LHSMAVD+AK GAPAEMP AL
Sbjct: 869 HFVSYMINDTLGAISTAHLIHADRDPLKARSPECVQLAALHSMAVDFAKTGAPAEMPLAL 928
Query: 786 RPRQFPDFMERSEKRSYKSTGVLGKLYRAVTSHSESNQNYINNICEAIPYDCDLEVDGFE 607
RPR+FPDFMER E+ Y S GVLGKLYRA H E + + + YD DLEV GF+
Sbjct: 929 RPREFPDFMERWERPMYVSNGVLGKLYRAALRHEEDAEALLPAGPPSCVYDPDLEVAGFD 988
Query: 606 AFLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKDRVLI 430
FL+ AEE Y YA++L +LM YY E EDEILTG +R++ +YL D ++Y +MKDR++
Sbjct: 989 EFLDAAEERYEAYAERLGALMTYYSAEREDEILTGNIRNKLVYLRRDNKRYFEMKDRIIA 1048
Query: 429 AVKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVMLSLK 250
AV +LH EV GW R C+E + R+A+AWYHVTYHP +F SFPW+ICD +L++K
Sbjct: 1049 AVDALHAEVRGWLR-ACKEDDASRVASAWYHVTYHPDRRGE-KRFWSFPWIICDTLLAIK 1106
Query: 249 NFKSQ*ELGKGEDVELDC 196
+ + + V +DC
Sbjct: 1107 AARRCRKRVEDAAVPMDC 1124
>ref|XP_012080102.1| PREDICTED: RNA-dependent RNA polymerase 2 isoform X2 [Jatropha
curcas]
Length = 940
Score = 654 bits (1687), Expect = 0.0
Identities = 321/544 (59%), Positives = 411/544 (75%), Gaps = 5/544 (0%)
Frame = -2
Query: 1866 SHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNRE 1687
+HTPSAFQIRYGG+KGVIAVDR S KLSLR SMLKF+S N MLNVTK S+S PC+LNRE
Sbjct: 390 NHTPSAFQIRYGGFKGVIAVDRNSLRKLSLRSSMLKFESENRMLNVTKWSDSMPCYLNRE 449
Query: 1686 IISLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVKTA-VKILMHGC 1510
I++LLSTLGV DEIF+ LQ Q+HLL ML +RE AL VL ++ + VK+L+ G
Sbjct: 450 IVTLLSTLGVKDEIFQGLQQQQLHLLGRMLNDREAALDVLENLAWVDSRNIMVKMLLQGY 509
Query: 1509 RPDAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQ 1330
+P+ EPYL MML+AY + L ++RS+CR+FVPKGR+LIGCLDE G L+YGQ+Y+RVTL++
Sbjct: 510 KPNVEPYLSMMLQAYHENLLVELRSRCRVFVPKGRILIGCLDEEGILDYGQIYVRVTLSK 569
Query: 1329 EELQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLI 1150
ELQN +Q+ F+KVD++ KNPCLHPGD+RV++AVY+ L+ GLVDC++
Sbjct: 570 SELQNADQSFFRKVDETTSIVTGKVVVTKNPCLHPGDVRVLEAVYEVGLEEK-GLVDCIL 628
Query: 1149 FPQKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVH 970
FPQKG RPHPNECSGGDLDGDLF + WDE LIP +TE+PM+Y+ RR R+MDH V LEE+H
Sbjct: 629 FPQKGERPHPNECSGGDLDGDLFFISWDEDLIPSQTESPMDYLGRRPRIMDHDVKLEEIH 688
Query: 969 KFFIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSA 790
KFF+DYMIND LGAI+TAHLVHAD EP KA S KCL+LA+LHSMAVD+AK GAPAEMP A
Sbjct: 689 KFFVDYMINDTLGAISTAHLVHADREPDKARSRKCLKLAELHSMAVDFAKTGAPAEMPRA 748
Query: 789 LRPRQFPDFMERSEKRSYKSTGVLGKLYRAV---TSHSESNQNYINNICEAIPYDCDLEV 619
L+P++FPDFMER +K +Y S VLGKLYR T + + I EA YDC+LEV
Sbjct: 749 LKPKEFPDFMERFDKSTYISDAVLGKLYRGTLDSTLQGRTKFIWSEKIAEA-TYDCNLEV 807
Query: 618 DGFEAFLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKD 442
+GF F+++A Y +KL+ LM YY ++EDE+LTG +R++ MYL D R+Y D KD
Sbjct: 808 EGFMEFIDIAANHKYMYMEKLSGLMNYYEAKNEDEMLTGNLRNKAMYLQRDNRRYGDTKD 867
Query: 441 RVLIAVKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVM 262
R+L+++KSL KE + WF ++C+ S +A+AWYHVT HP Y G L FPW++ D++
Sbjct: 868 RILLSMKSLQKEAKEWFESSCRPSTQQCLASAWYHVTCHPNYFQEGITCLGFPWIVGDIL 927
Query: 261 LSLK 250
L++K
Sbjct: 928 LNIK 931
>ref|XP_012080101.1| PREDICTED: RNA-dependent RNA polymerase 2 isoform X1 [Jatropha
curcas] gi|643720862|gb|KDP31126.1| hypothetical protein
JCGZ_11502 [Jatropha curcas]
Length = 1122
Score = 654 bits (1687), Expect = 0.0
Identities = 321/544 (59%), Positives = 411/544 (75%), Gaps = 5/544 (0%)
Frame = -2
Query: 1866 SHTPSAFQIRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNRE 1687
+HTPSAFQIRYGG+KGVIAVDR S KLSLR SMLKF+S N MLNVTK S+S PC+LNRE
Sbjct: 572 NHTPSAFQIRYGGFKGVIAVDRNSLRKLSLRSSMLKFESENRMLNVTKWSDSMPCYLNRE 631
Query: 1686 IISLLSTLGVDDEIFEQLQHDQMHLLDNMLTNREDALRVLGRVSGSGVKTA-VKILMHGC 1510
I++LLSTLGV DEIF+ LQ Q+HLL ML +RE AL VL ++ + VK+L+ G
Sbjct: 632 IVTLLSTLGVKDEIFQGLQQQQLHLLGRMLNDREAALDVLENLAWVDSRNIMVKMLLQGY 691
Query: 1509 RPDAEPYLVMMLKAYRDYQLSDIRSKCRIFVPKGRVLIGCLDELGTLEYGQVYLRVTLTQ 1330
+P+ EPYL MML+AY + L ++RS+CR+FVPKGR+LIGCLDE G L+YGQ+Y+RVTL++
Sbjct: 692 KPNVEPYLSMMLQAYHENLLVELRSRCRVFVPKGRILIGCLDEEGILDYGQIYVRVTLSK 751
Query: 1329 EELQNPNQALFQKVDQSXXXXXXXXXXXKNPCLHPGDIRVVQAVYDPKLDNTMGLVDCLI 1150
ELQN +Q+ F+KVD++ KNPCLHPGD+RV++AVY+ L+ GLVDC++
Sbjct: 752 SELQNADQSFFRKVDETTSIVTGKVVVTKNPCLHPGDVRVLEAVYEVGLEEK-GLVDCIL 810
Query: 1149 FPQKGPRPHPNECSGGDLDGDLFCVCWDEKLIPPKTEAPMEYIARRARLMDHKVTLEEVH 970
FPQKG RPHPNECSGGDLDGDLF + WDE LIP +TE+PM+Y+ RR R+MDH V LEE+H
Sbjct: 811 FPQKGERPHPNECSGGDLDGDLFFISWDEDLIPSQTESPMDYLGRRPRIMDHDVKLEEIH 870
Query: 969 KFFIDYMINDNLGAIATAHLVHADSEPSKALSTKCLQLAKLHSMAVDYAKNGAPAEMPSA 790
KFF+DYMIND LGAI+TAHLVHAD EP KA S KCL+LA+LHSMAVD+AK GAPAEMP A
Sbjct: 871 KFFVDYMINDTLGAISTAHLVHADREPDKARSRKCLKLAELHSMAVDFAKTGAPAEMPRA 930
Query: 789 LRPRQFPDFMERSEKRSYKSTGVLGKLYRAV---TSHSESNQNYINNICEAIPYDCDLEV 619
L+P++FPDFMER +K +Y S VLGKLYR T + + I EA YDC+LEV
Sbjct: 931 LKPKEFPDFMERFDKSTYISDAVLGKLYRGTLDSTLQGRTKFIWSEKIAEA-TYDCNLEV 989
Query: 618 DGFEAFLEVAEECYCQYADKLNSLMKYYGVEHEDEILTGYMRSRQMYL-NDKRKYEDMKD 442
+GF F+++A Y +KL+ LM YY ++EDE+LTG +R++ MYL D R+Y D KD
Sbjct: 990 EGFMEFIDIAANHKYMYMEKLSGLMNYYEAKNEDEMLTGNLRNKAMYLQRDNRRYGDTKD 1049
Query: 441 RVLIAVKSLHKEVEGWFRNNCQESEFLRMAAAWYHVTYHPKYSASGTKFLSFPWVICDVM 262
R+L+++KSL KE + WF ++C+ S +A+AWYHVT HP Y G L FPW++ D++
Sbjct: 1050 RILLSMKSLQKEAKEWFESSCRPSTQQCLASAWYHVTCHPNYFQEGITCLGFPWIVGDIL 1109
Query: 261 LSLK 250
L++K
Sbjct: 1110 LNIK 1113