BLASTX nr result
ID: Anemarrhena21_contig00019929
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00019929
(930 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002454320.1| hypothetical protein SORBIDRAFT_04g028630 [S... 218 5e-54
gb|EEE57765.1| hypothetical protein OsJ_08301 [Oryza sativa Japo... 214 5e-53
gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare] 214 5e-53
gb|EAY87440.1| hypothetical protein OsI_08849 [Oryza sativa Indi... 214 7e-53
gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare su... 214 7e-53
ref|XP_010917515.1| PREDICTED: probable RNA-dependent RNA polyme... 213 1e-52
ref|XP_008812977.1| PREDICTED: probable RNA-dependent RNA polyme... 213 1e-52
ref|XP_008644240.1| PREDICTED: putative RNA-dependent RNA polyme... 209 2e-51
ref|XP_006647856.1| PREDICTED: probable RNA-dependent RNA polyme... 207 6e-51
gb|ACH53360.1| RNA-directed RNA polymerase 1a, partial [Hordeum ... 206 1e-50
gb|AAR91037.1| RNA-directed RNA polymerase 2 [Hordeum vulgare su... 206 1e-50
gb|EMT27792.1| Putative RNA-dependent RNA polymerase 1 [Aegilops... 205 3e-50
ref|XP_009381445.1| PREDICTED: probable RNA-dependent RNA polyme... 205 4e-50
ref|NP_001183933.1| putative RNA-dependent RNA polymerase [Zea m... 204 7e-50
ref|XP_012072325.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 203 2e-49
ref|XP_010236147.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 202 2e-49
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 202 2e-49
ref|XP_004953848.1| PREDICTED: probable RNA-dependent RNA polyme... 202 3e-49
gb|EMS66194.1| RNA-dependent RNA polymerase 1 [Triticum urartu] 201 6e-49
ref|XP_012072320.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 200 1e-48
>ref|XP_002454320.1| hypothetical protein SORBIDRAFT_04g028630 [Sorghum bicolor]
gi|241934151|gb|EES07296.1| hypothetical protein
SORBIDRAFT_04g028630 [Sorghum bicolor]
Length = 1114
Score = 218 bits (555), Expect = 5e-54
Identities = 108/213 (50%), Positives = 149/213 (69%), Gaps = 2/213 (0%)
Frame = -3
Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
M G+T+QV+GF L +A+ VK FLE+ +G +++A+K+RHP+ I SRA A+VQF + +
Sbjct: 1 MVGRTIQVHGFALTDSAESVKEFLERISGAGTIYALKLRHPRNISANSRAFAIVQFQSQE 60
Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
A ++ + Q+ + GR YLK R +RDI P PR +F L+DTVLHLGCL+ E L L
Sbjct: 61 SASLVEDVVQRNAPRIGRFYLKTRPADRDIVPRPRIPMFSLEDTVLHLGCLVKENILSAL 120
Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHS--KFLVIQVQ 101
++ V V FGF+MKKIYF+L+ YKLELSYESIW++QLH P A S KFL+IQVQ
Sbjct: 121 FTASNVSVQFGFDMKKIYFYLSYNFIKYKLELSYESIWEIQLHRPPAYRSRTKFLLIQVQ 180
Query: 100 AAPRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
AAP+IYE++ L++EDP N+FM+ D+QW
Sbjct: 181 AAPKIYELLPRRPGLMYEDPFFNWFMDDTDEQW 213
>gb|EEE57765.1| hypothetical protein OsJ_08301 [Oryza sativa Japonica Group]
Length = 1027
Score = 214 bits (546), Expect = 5e-53
Identities = 109/210 (51%), Positives = 141/210 (67%), Gaps = 2/210 (0%)
Frame = -3
Query: 625 KTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSKDAE 446
KT+QV GF LD +A VK+ LE+ G +V+AVK+RHPK + SRA A+VQF T + A
Sbjct: 4 KTLQVSGFALDDSADYVKDLLERIVGCGNVYAVKLRHPKNVTATSRAYAIVQFQTEEHAS 63
Query: 445 IIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVLWSF 266
++ N AQ++ G YLKV +RDI P PR +F L+D LH GCL+ E L LWS
Sbjct: 64 LVKNAAQRKILRRGHYYLKVHPSDRDIVPRPRVSMFKLEDVTLHFGCLLKETILSALWSR 123
Query: 265 KGVKVDFGFNMKKIYFFLTQGTQS--YKLELSYESIWDVQLHCPHAQHSKFLVIQVQAAP 92
KGV V+FGFN+KKIYF+L S YKLELS+ESIW++QL P +KFL+IQVQAAP
Sbjct: 124 KGVSVEFGFNLKKIYFYLQLPNSSIEYKLELSHESIWEIQLQRPPKSQTKFLLIQVQAAP 183
Query: 91 RIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
+IYE +++EDP+ NYF + DDQW
Sbjct: 184 KIYEQTPRRSGVMYEDPLFNYFRDHTDDQW 213
>gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare]
Length = 1115
Score = 214 bits (546), Expect = 5e-53
Identities = 108/211 (51%), Positives = 137/211 (64%)
Frame = -3
Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
M GKT+QV GFP V A VK+ LE+ G +VFAVK+R PK I SR+ A+VQF +
Sbjct: 1 MGGKTLQVSGFPSTVNADHVKDLLEQIVGTGNVFAVKLRPPKNISANSRSFAIVQFQSEA 60
Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
A ++ N AQ+ + G YLK RY ERDI P PR +F L+ LH GCL+ E L VL
Sbjct: 61 HASLVLNAAQRNALRSGSHYLKARYAERDIVPRPRTTIFNLQGAKLHFGCLLKERVLSVL 120
Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQAA 95
WS V V+FGF MK+I F L ++ YKLELSYESIW++QLH P KFL+IQVQAA
Sbjct: 121 WSGTNVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQVQAA 180
Query: 94 PRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
P+IYE + +++DP+ NYF + DDQW
Sbjct: 181 PKIYEQNIRLSGSMYDDPLFNYFRDDTDDQW 211
>gb|EAY87440.1| hypothetical protein OsI_08849 [Oryza sativa Indica Group]
Length = 1067
Score = 214 bits (545), Expect = 7e-53
Identities = 109/210 (51%), Positives = 140/210 (66%), Gaps = 2/210 (0%)
Frame = -3
Query: 625 KTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSKDAE 446
KT+QV GF LD +A VK+ LE+ G +V+AVK+RHPK + SRA A+VQF T + A
Sbjct: 4 KTLQVSGFALDDSADYVKDLLERIVGCGNVYAVKLRHPKNVTATSRAYAIVQFQTEEHAS 63
Query: 445 IIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVLWSF 266
++ N AQ++ G YLKV +RDI P PR +F L+D LH GCL+ E L LWS
Sbjct: 64 LVKNAAQRKILRRGHYYLKVHPSDRDIVPRPRVSMFKLEDVTLHFGCLLKETILSALWSR 123
Query: 265 KGVKVDFGFNMKKIYFFLTQGTQS--YKLELSYESIWDVQLHCPHAQHSKFLVIQVQAAP 92
GV V+FGFN+KKIYF+L S YKLELSYESIW++QL P +KFL+IQVQAAP
Sbjct: 124 TGVSVEFGFNLKKIYFYLQLPNSSIEYKLELSYESIWEIQLQRPPKSQTKFLLIQVQAAP 183
Query: 91 RIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
+IYE +++EDP+ NYF + DDQW
Sbjct: 184 KIYEQTPRRSGVMYEDPLFNYFRDHTDDQW 213
>gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare subsp. vulgare]
Length = 1115
Score = 214 bits (545), Expect = 7e-53
Identities = 108/211 (51%), Positives = 137/211 (64%)
Frame = -3
Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
M GKT+QV GFP V A VK+ LE+ G +VFAVK+R PK I SR+ A+VQF +
Sbjct: 1 MGGKTLQVSGFPSTVNADHVKDLLEQIVGTGNVFAVKLRPPKNISANSRSFAIVQFQSEA 60
Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
A ++ N AQ+ + G YLK RY ERDI P PR +F L+ LH GCL+ E L VL
Sbjct: 61 HASLVLNAAQRNALRSGSHYLKARYAERDIVPRPRTTIFNLQGAKLHFGCLLKERVLSVL 120
Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQAA 95
WS V V+FGF MK+I F L ++ YKLELSYESIW++QLH P KFL+IQVQAA
Sbjct: 121 WSGTDVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQVQAA 180
Query: 94 PRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
P+IYE + +++DP+ NYF + DDQW
Sbjct: 181 PKIYEQNIRLSGSMYDDPLFNYFRDDTDDQW 211
>ref|XP_010917515.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
[Elaeis guineensis] gi|743774329|ref|XP_010917516.1|
PREDICTED: probable RNA-dependent RNA polymerase 1
isoform X1 [Elaeis guineensis]
Length = 1129
Score = 213 bits (543), Expect = 1e-52
Identities = 110/211 (52%), Positives = 140/211 (66%)
Frame = -3
Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
M KT ++GFP TA VK FLE + G+ ++FA+K R PK + SRA A+VQF T++
Sbjct: 1 MGSKTTNIHGFPTTATAPSVKAFLEVHTGEGTIFALKFRLPKYVTAKSRAYAIVQFTTNR 60
Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
AE I A K Y LKVR VERDI P PR LF+L++ LH G +S+ VL
Sbjct: 61 HAESI---AHKHLVWYDGFVLKVRDVERDIVPKPRTSLFILENATLHFGSPVSQNKFSVL 117
Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQAA 95
WS VKV+FGFN++KIYFFL++G SYK EL+YESIW++QLH QH +FL+IQV AA
Sbjct: 118 WSAMDVKVNFGFNLRKIYFFLSRGGHSYKFELAYESIWEIQLHRSSTQHLQFLLIQVVAA 177
Query: 94 PRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
P+IYE+ N L+ EDPI NYF + DDQW
Sbjct: 178 PKIYELFPRNSGLLLEDPIYNYFKDPPDDQW 208
>ref|XP_008812977.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Phoenix
dactylifera] gi|672186025|ref|XP_008812978.1| PREDICTED:
probable RNA-dependent RNA polymerase 1 [Phoenix
dactylifera]
Length = 1131
Score = 213 bits (543), Expect = 1e-52
Identities = 106/211 (50%), Positives = 145/211 (68%)
Frame = -3
Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
M KT+ ++GFP TA VK FLE + G +++A+K R PK + SRA A+VQF+ +K
Sbjct: 1 MGSKTINIHGFPTTATAPSVKEFLEVHTGKGTIYALKFRLPKYVTAKSRAYAIVQFIANK 60
Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
AE I A K+ LKVR++ERDI P PR LFVL++T +H G +S+ VL
Sbjct: 61 HAESI---ACKRLVWVDGFVLKVRHMERDIVPKPRTSLFVLENTTVHFGSPVSQNKFSVL 117
Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQAA 95
WS K V+V+FGF+M+KIYFFL QG+ SYK EL+YESIW++QLH ++ +FL+IQV AA
Sbjct: 118 WSPKDVRVNFGFSMRKIYFFLVQGSHSYKFELAYESIWEIQLHHSSTKYLQFLLIQVVAA 177
Query: 94 PRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
P++YE+ + N L+HEDP NYF ++ DDQW
Sbjct: 178 PKVYELSLRNSGLLHEDPEYNYFKDLPDDQW 208
>ref|XP_008644240.1| PREDICTED: putative RNA-dependent RNA polymerase isoform X1 [Zea
mays] gi|670405152|ref|XP_008644241.1| PREDICTED:
putative RNA-dependent RNA polymerase isoform X1 [Zea
mays] gi|670405154|ref|XP_008644242.1| PREDICTED:
putative RNA-dependent RNA polymerase isoform X1 [Zea
mays]
Length = 1108
Score = 209 bits (533), Expect = 2e-51
Identities = 106/213 (49%), Positives = 144/213 (67%), Gaps = 2/213 (0%)
Frame = -3
Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
M G+T+QV GF L +A+ VK FLE+ AG ++ A+K+RHP+ I SRA A+VQF + +
Sbjct: 1 MVGRTIQVQGFALTDSAESVKLFLERIAGAGTICALKLRHPRNISANSRAFAIVQFQSQE 60
Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
A ++ N AQ+Q GR YL+ R +RDI P PR +F L+D VLHLGCL+ E L L
Sbjct: 61 SASLVENAAQRQVLKIGRFYLRTRPADRDIVPRPRIPMFSLEDIVLHLGCLVKENILSAL 120
Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSK--FLVIQVQ 101
+ V V FGF+MKKIYF+L+ +KLELSYESIW++QLH P A S+ FL+IQVQ
Sbjct: 121 FRASNVSVQFGFDMKKIYFYLSYNFTKFKLELSYESIWEMQLHRPPAYRSRTQFLLIQVQ 180
Query: 100 AAPRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
AAP+IY+++ L+ EDP N+F + D+QW
Sbjct: 181 AAPKIYKLLPGRPGLMFEDPFFNWFRDDTDEQW 213
>ref|XP_006647856.1| PREDICTED: probable RNA-dependent RNA polymerase 1-like [Oryza
brachyantha]
Length = 1113
Score = 207 bits (528), Expect = 6e-51
Identities = 106/213 (49%), Positives = 139/213 (65%), Gaps = 2/213 (0%)
Frame = -3
Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
M GKT+QV GF L TA+ VK+ LE+ G +V+A+K+RHPK I SRA A+VQF + +
Sbjct: 1 MVGKTLQVSGFSLHDTAEYVKDLLERIVGSGNVYALKLRHPKNITATSRAFAIVQFQSEE 60
Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
++ AQ+ GR YLKV +RDI P PR +F L+D LH+GCL+ E L L
Sbjct: 61 HGSLVKIAAQRNILRSGRYYLKVHPSDRDIVPRPRVSMFKLEDATLHIGCLLRERVLSAL 120
Query: 274 WSFKGVKVDFGFNMKKIYFF--LTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQ 101
WS V V+FGFN+KKIYF L G+ +KLELSYESIW+++LH P +KFL+IQV+
Sbjct: 121 WSRTKVSVEFGFNLKKIYFHLQLPSGSTEFKLELSYESIWEIELHRPPRSQTKFLLIQVE 180
Query: 100 AAPRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
AAP+IYE ++ EDP NYF + DDQW
Sbjct: 181 AAPKIYEPTPRRSGVMFEDPSFNYFRDSTDDQW 213
>gb|ACH53360.1| RNA-directed RNA polymerase 1a, partial [Hordeum vulgare]
Length = 1114
Score = 206 bits (525), Expect = 1e-50
Identities = 108/211 (51%), Positives = 135/211 (63%)
Frame = -3
Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
M GKT+QV GFP V VK+ LE+ G V AVK+R PK I SR+ A+VQF T
Sbjct: 1 MGGKTLQVSGFPATVNVHHVKDLLEQIVGLGKVCAVKLRPPKNISANSRSFAIVQFETEA 60
Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
A ++ N A+ + G +YLKVR ERDI PR LF L+D LH GCL+ E L VL
Sbjct: 61 HASLVVNAARGNALRSGSNYLKVRPAERDIILKPRTALFNLEDATLHFGCLLRERVLSVL 120
Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQAA 95
WS GV V+FGF MKKI F LT + YKLELSYESIW++QL+ P KFL+IQV AA
Sbjct: 121 WSGTGVSVEFGFAMKKIDFCLTYNLKKYKLELSYESIWEIQLYHPPGSQKKFLLIQVMAA 180
Query: 94 PRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
P+IYE + + +++DP+ NYF + DDQW
Sbjct: 181 PKIYEQNLWHSGSMYDDPLFNYFRDDTDDQW 211
>gb|AAR91037.1| RNA-directed RNA polymerase 2 [Hordeum vulgare subsp. vulgare]
Length = 1115
Score = 206 bits (525), Expect = 1e-50
Identities = 108/211 (51%), Positives = 135/211 (63%)
Frame = -3
Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
M GKT+QV GFP V VK+ LE+ G V AVK+R PK I SR+ A+VQF T
Sbjct: 1 MGGKTLQVSGFPATVNVHHVKDLLEQIVGLGKVCAVKLRPPKNISANSRSFAIVQFETEA 60
Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
A ++ N A+ + G +YLKVR ERDI PR LF L+D LH GCL+ E L VL
Sbjct: 61 HASLVVNAARGNALRSGSNYLKVRPAERDIILKPRTALFNLEDATLHFGCLLRERVLSVL 120
Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQAA 95
WS GV V+FGF MKKI F LT + YKLELSYESIW++QL+ P KFL+IQV AA
Sbjct: 121 WSGTGVSVEFGFAMKKIDFCLTYNLKKYKLELSYESIWEIQLYHPPGSQKKFLLIQVMAA 180
Query: 94 PRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
P+IYE + + +++DP+ NYF + DDQW
Sbjct: 181 PKIYEQNLWHSGSMYDDPLFNYFRDDTDDQW 211
>gb|EMT27792.1| Putative RNA-dependent RNA polymerase 1 [Aegilops tauschii]
Length = 1144
Score = 205 bits (522), Expect = 3e-50
Identities = 105/227 (46%), Positives = 140/227 (61%), Gaps = 16/227 (7%)
Frame = -3
Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
M GKT+QV GFP V A VK+ LE+ G +VFA+K+R PK I S++ A+VQF +
Sbjct: 1 MGGKTIQVSGFPSTVNADHVKDLLEQIVGTGNVFAIKLRPPKNISANSKSFAIVQFQSEA 60
Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
A ++ N A++ + G ++LK RY ERDI P PR +F L+D LH GCL+ E+ L VL
Sbjct: 61 HASLVLNAARRNALRSGSNHLKARYAERDIVPRPRTTIFNLQDATLHFGCLLREKALSVL 120
Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVI----- 110
WS V V+FGF MK+I F L ++ YKLELSYESIW++QLH P KFL+I
Sbjct: 121 WSGTNVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQLRDF 180
Query: 109 -----------QVQAAPRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
QVQAAP+IYE + +++DP+ NYF + DDQW
Sbjct: 181 DNLSWRNVSVSQVQAAPKIYEQNIRRSGSMYDDPLFNYFRDDTDDQW 227
>ref|XP_009381445.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Musa acuminata
subsp. malaccensis]
Length = 1134
Score = 205 bits (521), Expect = 4e-50
Identities = 106/211 (50%), Positives = 141/211 (66%)
Frame = -3
Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
M KT+Q+ FP TA++V FLEKY G+ SV A+K+R K S A+VQF +
Sbjct: 1 MTSKTIQISRFPSYATAKQVTVFLEKYTGEGSVIALKLRP----SKNSTVYAIVQFPRRE 56
Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
D + ++ Q+ SY YL VR +ERDI P PRK LFVL++ LH GC +S++ L VL
Sbjct: 57 DVQDLFVMIQQGKLSYDGHYLTVRNMERDIIPKPRKPLFVLENVTLHFGCPLSQKRLSVL 116
Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQAA 95
S + VKV+FGF M+KIYF L+ G SYKLEL+YESIW+++LH Q+S+FLV+QV AA
Sbjct: 117 RSMEDVKVNFGFEMRKIYFLLSHGIHSYKLELAYESIWEIRLHRSSVQNSQFLVVQVVAA 176
Query: 94 PRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
P+IYE N ++EDP LNYF ++ DDQW
Sbjct: 177 PKIYETPSRNTGSLYEDPRLNYFRDLPDDQW 207
>ref|NP_001183933.1| putative RNA-dependent RNA polymerase [Zea mays]
gi|254838301|gb|ACT83377.1| putative RNA-dependent RNA
polymerase [Zea mays]
Length = 1108
Score = 204 bits (519), Expect = 7e-50
Identities = 103/213 (48%), Positives = 142/213 (66%), Gaps = 2/213 (0%)
Frame = -3
Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
M G+T+QV GF L +A+ VK FLE+ AG ++ A+K+RHP+ I SRA A+ QF + +
Sbjct: 1 MVGRTIQVQGFALTDSAEPVKLFLERIAGAGTICALKLRHPRNISANSRAFAIAQFQSQE 60
Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
A ++ N Q+ GR YL+ R +RDI P PR +F L+D VLHLGCL+ E L L
Sbjct: 61 SASLVENATQRLVLKIGRFYLRTRPADRDIVPRPRIPMFSLEDIVLHLGCLVKENILSAL 120
Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSK--FLVIQVQ 101
+ V V FGF+MKKIYF+L+ +KLELSYESIW++QLH P A S+ FL+IQVQ
Sbjct: 121 FRASNVSVQFGFDMKKIYFYLSYNFTKFKLELSYESIWEMQLHRPPAYRSRTQFLLIQVQ 180
Query: 100 AAPRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
AAP+IY+++ L+ EDP N+F + +D+QW
Sbjct: 181 AAPKIYKLLPGRPGLMFEDPFFNWFRDEKDEQW 213
>ref|XP_012072325.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Jatropha curcas]
Length = 1096
Score = 203 bits (516), Expect = 2e-49
Identities = 98/209 (46%), Positives = 138/209 (66%)
Frame = -3
Query: 628 GKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSKDA 449
GKT+ VYGFP VT VK FLE ++G+ +VFA+K+R K G R A+VQF T++DA
Sbjct: 26 GKTIHVYGFPSHVTVDEVKKFLESHSGEGTVFAMKIRETK--NGGPRKYAIVQFQTARDA 83
Query: 448 EIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVLWS 269
E+I + K+ + YG SYLK R ++ DI P PR L + LH GC IS+E VLW+
Sbjct: 84 ELIISLTNKRLW-YGTSYLKARTLDNDIVPKPRTFLHSMDHITLHFGCHISKEKFSVLWT 142
Query: 268 FKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQAAPR 89
V V+FGF M+K++FFL+ G YKL+LSYE++W ++LHCP + K+L+IQ+ APR
Sbjct: 143 GTNVLVNFGFGMRKLHFFLSHGQMDYKLDLSYENVWQIELHCPRGRSVKYLLIQLYGAPR 202
Query: 88 IYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
I+E + + F + E P+ NYF + D+QW
Sbjct: 203 IFEKEIAS-FNVFESPLFNYFKDTPDEQW 230
>ref|XP_010236147.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA
polymerase 1 [Brachypodium distachyon]
Length = 1117
Score = 202 bits (515), Expect = 2e-49
Identities = 108/213 (50%), Positives = 137/213 (64%), Gaps = 2/213 (0%)
Frame = -3
Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
M GKT+Q+ GFP +V A VK+ LE+ G +V+AVK+R PK I SR+ A+VQF T +
Sbjct: 1 MGGKTLQISGFPANVHADHVKDLLEQIVGAGNVYAVKLRPPKNITANSRSFAIVQFQTEE 60
Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
A ++ N A + S YLKVR ERDI P PR +F L L CL+ E L VL
Sbjct: 61 YASLVENAAXRNVLSTESYYLKVRPAERDIVPRPRTAMFTLHGATLRFSCLLKENVLSVL 120
Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHS--KFLVIQVQ 101
WS V V+FGF+MKKIYF+L + YKLELSYESIW++QLH P A S KFL+IQV+
Sbjct: 121 WSGTDVSVEFGFDMKKIYFYLE--CRKYKLELSYESIWEIQLHRPPAYRSQKKFLLIQVE 178
Query: 100 AAPRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
AAP+IYE+ + EDP+ NYF + DDQW
Sbjct: 179 AAPKIYELNQRRAGFMFEDPLFNYFRDDTDDQW 211
>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 202 bits (515), Expect = 2e-49
Identities = 103/209 (49%), Positives = 137/209 (65%)
Frame = -3
Query: 628 GKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSKDA 449
GKT+QVYGF DV+A VK FLE Y G E+V+A+K+R K K RA A+VQF S DA
Sbjct: 2 GKTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHK---KSGRAFAIVQFTRSSDA 58
Query: 448 EIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVLWS 269
+I A ++ + YGRSYLK R +E DI P PR L ++ ++ GC +SEE VLW
Sbjct: 59 GLIIRLANQRLY-YGRSYLKAREMETDIVPKPRVFLHTMERVTVNFGCQVSEEKFYVLWK 117
Query: 268 FKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQAAPR 89
V ++FG M+K+ F L+ + YKLEL YE+IW ++L CPH+Q SK L+IQ+ APR
Sbjct: 118 ADNVTLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQLFGAPR 177
Query: 88 IYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
IYE VP + +DP+LNYF ++ DDQW
Sbjct: 178 IYEKEVPASECVFDDPLLNYFKDMPDDQW 206
>ref|XP_004953848.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Setaria
italica]
Length = 1123
Score = 202 bits (514), Expect = 3e-49
Identities = 103/211 (48%), Positives = 142/211 (67%), Gaps = 2/211 (0%)
Frame = -3
Query: 628 GKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSKDA 449
G+T+QV GF L +A+ VK+FLE+ AG +V+A+K+RHP+ I S+A A+VQF T + A
Sbjct: 2 GRTIQVSGFALTDSAEYVKDFLERIAGAGTVYALKLRHPRNITATSKAFAIVQFQTQECA 61
Query: 448 EIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVLWS 269
++ N AQ+ + YLK R +RDI P PR +F L LHLGCL+ E L L+S
Sbjct: 62 SLVENAAQRNALRSRCIYLKARPADRDIVPRPRIAMFSLDAAALHLGCLVKENILYTLFS 121
Query: 268 FKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHA--QHSKFLVIQVQAA 95
+ + V FGF+MKKIYF+L+ YKLELSYESIW++QLH P A +KFL+ QVQAA
Sbjct: 122 VRNISVQFGFDMKKIYFYLSYNLIKYKLELSYESIWEMQLHRPPAYLSQTKFLLFQVQAA 181
Query: 94 PRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
P+IYE++ L++EDP N+F + D+QW
Sbjct: 182 PKIYELLPRRSGLMYEDPFFNWFRDDTDEQW 212
>gb|EMS66194.1| RNA-dependent RNA polymerase 1 [Triticum urartu]
Length = 1252
Score = 201 bits (511), Expect = 6e-49
Identities = 105/234 (44%), Positives = 139/234 (59%), Gaps = 23/234 (9%)
Frame = -3
Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
M GKT+QV GFP V A VK+ LEK G +VFA+K+R PK I S++ A+VQF +
Sbjct: 1 MGGKTIQVSGFPSTVNADHVKDLLEKIVGTGNVFAIKLRPPKNISANSKSFAIVQFQSEA 60
Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
A ++ N A++ + G ++LK RY ERDI P PR +F L+D LH GCL+ E+ L VL
Sbjct: 61 HASLVLNAARRNALRSGSNHLKARYAERDIVPRPRTTIFNLQDATLHFGCLLREKVLSVL 120
Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVI----- 110
WS V V+FGF MK+I F L ++ YKLELSYESIW++QLH P KFL+I
Sbjct: 121 WSGTNVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQLFLF 180
Query: 109 ------------------QVQAAPRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
QVQAAP+IYE + +++DP+ NY + DDQW
Sbjct: 181 IESSEIFVNLSWRNVSVSQVQAAPKIYEQNIRRSGSMYDDPLFNYSRDDTDDQW 234
>ref|XP_012072320.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha
curcas]
Length = 1144
Score = 200 bits (508), Expect = 1e-48
Identities = 99/216 (45%), Positives = 139/216 (64%)
Frame = -3
Query: 649 SFT*NMEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQ 470
+F ++ GKT+QVYGFP VT VK FLE ++G+ +VFA+K+R K +G R A+VQ
Sbjct: 12 NFRISLMGKTIQVYGFPSHVTVDEVKKFLESHSGEGTVFAMKIRETK--NRGRRKYAIVQ 69
Query: 469 FLTSKDAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEE 290
F T++DAE+I + K+ YG SYLK R ++ DI P PR L + LH GC IS+E
Sbjct: 70 FQTARDAELIISLTNKR-LRYGTSYLKARPLDNDIVPKPRTFLHSMDHITLHFGCQISKE 128
Query: 289 TLGVLWSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVI 110
VLW+ V V+FGF M+K+ FFL+ G YKLELSYE++W ++LHCP + K+L+I
Sbjct: 129 KFSVLWTGTNVSVNFGFGMRKLQFFLSHGQMGYKLELSYENVWQMELHCPRGRSVKYLLI 188
Query: 109 QVQAAPRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
Q+ APRI+E + F + E P+ N + D+QW
Sbjct: 189 QLYGAPRIFEKEIAT-FNVFEIPLFNDLKDTPDEQW 223