BLASTX nr result

ID: Anemarrhena21_contig00019929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00019929
         (930 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454320.1| hypothetical protein SORBIDRAFT_04g028630 [S...   218   5e-54
gb|EEE57765.1| hypothetical protein OsJ_08301 [Oryza sativa Japo...   214   5e-53
gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare]       214   5e-53
gb|EAY87440.1| hypothetical protein OsI_08849 [Oryza sativa Indi...   214   7e-53
gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare su...   214   7e-53
ref|XP_010917515.1| PREDICTED: probable RNA-dependent RNA polyme...   213   1e-52
ref|XP_008812977.1| PREDICTED: probable RNA-dependent RNA polyme...   213   1e-52
ref|XP_008644240.1| PREDICTED: putative RNA-dependent RNA polyme...   209   2e-51
ref|XP_006647856.1| PREDICTED: probable RNA-dependent RNA polyme...   207   6e-51
gb|ACH53360.1| RNA-directed RNA polymerase 1a, partial [Hordeum ...   206   1e-50
gb|AAR91037.1| RNA-directed RNA polymerase 2 [Hordeum vulgare su...   206   1e-50
gb|EMT27792.1| Putative RNA-dependent RNA polymerase 1 [Aegilops...   205   3e-50
ref|XP_009381445.1| PREDICTED: probable RNA-dependent RNA polyme...   205   4e-50
ref|NP_001183933.1| putative RNA-dependent RNA polymerase [Zea m...   204   7e-50
ref|XP_012072325.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   203   2e-49
ref|XP_010236147.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA...   202   2e-49
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      202   2e-49
ref|XP_004953848.1| PREDICTED: probable RNA-dependent RNA polyme...   202   3e-49
gb|EMS66194.1| RNA-dependent RNA polymerase 1 [Triticum urartu]       201   6e-49
ref|XP_012072320.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   200   1e-48

>ref|XP_002454320.1| hypothetical protein SORBIDRAFT_04g028630 [Sorghum bicolor]
           gi|241934151|gb|EES07296.1| hypothetical protein
           SORBIDRAFT_04g028630 [Sorghum bicolor]
          Length = 1114

 Score =  218 bits (555), Expect = 5e-54
 Identities = 108/213 (50%), Positives = 149/213 (69%), Gaps = 2/213 (0%)
 Frame = -3

Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
           M G+T+QV+GF L  +A+ VK FLE+ +G  +++A+K+RHP+ I   SRA A+VQF + +
Sbjct: 1   MVGRTIQVHGFALTDSAESVKEFLERISGAGTIYALKLRHPRNISANSRAFAIVQFQSQE 60

Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
            A ++ +  Q+ +   GR YLK R  +RDI P PR  +F L+DTVLHLGCL+ E  L  L
Sbjct: 61  SASLVEDVVQRNAPRIGRFYLKTRPADRDIVPRPRIPMFSLEDTVLHLGCLVKENILSAL 120

Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHS--KFLVIQVQ 101
           ++   V V FGF+MKKIYF+L+     YKLELSYESIW++QLH P A  S  KFL+IQVQ
Sbjct: 121 FTASNVSVQFGFDMKKIYFYLSYNFIKYKLELSYESIWEIQLHRPPAYRSRTKFLLIQVQ 180

Query: 100 AAPRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
           AAP+IYE++     L++EDP  N+FM+  D+QW
Sbjct: 181 AAPKIYELLPRRPGLMYEDPFFNWFMDDTDEQW 213


>gb|EEE57765.1| hypothetical protein OsJ_08301 [Oryza sativa Japonica Group]
          Length = 1027

 Score =  214 bits (546), Expect = 5e-53
 Identities = 109/210 (51%), Positives = 141/210 (67%), Gaps = 2/210 (0%)
 Frame = -3

Query: 625 KTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSKDAE 446
           KT+QV GF LD +A  VK+ LE+  G  +V+AVK+RHPK +   SRA A+VQF T + A 
Sbjct: 4   KTLQVSGFALDDSADYVKDLLERIVGCGNVYAVKLRHPKNVTATSRAYAIVQFQTEEHAS 63

Query: 445 IIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVLWSF 266
           ++ N AQ++    G  YLKV   +RDI P PR  +F L+D  LH GCL+ E  L  LWS 
Sbjct: 64  LVKNAAQRKILRRGHYYLKVHPSDRDIVPRPRVSMFKLEDVTLHFGCLLKETILSALWSR 123

Query: 265 KGVKVDFGFNMKKIYFFLTQGTQS--YKLELSYESIWDVQLHCPHAQHSKFLVIQVQAAP 92
           KGV V+FGFN+KKIYF+L     S  YKLELS+ESIW++QL  P    +KFL+IQVQAAP
Sbjct: 124 KGVSVEFGFNLKKIYFYLQLPNSSIEYKLELSHESIWEIQLQRPPKSQTKFLLIQVQAAP 183

Query: 91  RIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
           +IYE       +++EDP+ NYF +  DDQW
Sbjct: 184 KIYEQTPRRSGVMYEDPLFNYFRDHTDDQW 213


>gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare]
          Length = 1115

 Score =  214 bits (546), Expect = 5e-53
 Identities = 108/211 (51%), Positives = 137/211 (64%)
 Frame = -3

Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
           M GKT+QV GFP  V A  VK+ LE+  G  +VFAVK+R PK I   SR+ A+VQF +  
Sbjct: 1   MGGKTLQVSGFPSTVNADHVKDLLEQIVGTGNVFAVKLRPPKNISANSRSFAIVQFQSEA 60

Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
            A ++ N AQ+ +   G  YLK RY ERDI P PR  +F L+   LH GCL+ E  L VL
Sbjct: 61  HASLVLNAAQRNALRSGSHYLKARYAERDIVPRPRTTIFNLQGAKLHFGCLLKERVLSVL 120

Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQAA 95
           WS   V V+FGF MK+I F L   ++ YKLELSYESIW++QLH P     KFL+IQVQAA
Sbjct: 121 WSGTNVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQVQAA 180

Query: 94  PRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
           P+IYE  +     +++DP+ NYF +  DDQW
Sbjct: 181 PKIYEQNIRLSGSMYDDPLFNYFRDDTDDQW 211


>gb|EAY87440.1| hypothetical protein OsI_08849 [Oryza sativa Indica Group]
          Length = 1067

 Score =  214 bits (545), Expect = 7e-53
 Identities = 109/210 (51%), Positives = 140/210 (66%), Gaps = 2/210 (0%)
 Frame = -3

Query: 625 KTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSKDAE 446
           KT+QV GF LD +A  VK+ LE+  G  +V+AVK+RHPK +   SRA A+VQF T + A 
Sbjct: 4   KTLQVSGFALDDSADYVKDLLERIVGCGNVYAVKLRHPKNVTATSRAYAIVQFQTEEHAS 63

Query: 445 IIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVLWSF 266
           ++ N AQ++    G  YLKV   +RDI P PR  +F L+D  LH GCL+ E  L  LWS 
Sbjct: 64  LVKNAAQRKILRRGHYYLKVHPSDRDIVPRPRVSMFKLEDVTLHFGCLLKETILSALWSR 123

Query: 265 KGVKVDFGFNMKKIYFFLTQGTQS--YKLELSYESIWDVQLHCPHAQHSKFLVIQVQAAP 92
            GV V+FGFN+KKIYF+L     S  YKLELSYESIW++QL  P    +KFL+IQVQAAP
Sbjct: 124 TGVSVEFGFNLKKIYFYLQLPNSSIEYKLELSYESIWEIQLQRPPKSQTKFLLIQVQAAP 183

Query: 91  RIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
           +IYE       +++EDP+ NYF +  DDQW
Sbjct: 184 KIYEQTPRRSGVMYEDPLFNYFRDHTDDQW 213


>gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare subsp. vulgare]
          Length = 1115

 Score =  214 bits (545), Expect = 7e-53
 Identities = 108/211 (51%), Positives = 137/211 (64%)
 Frame = -3

Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
           M GKT+QV GFP  V A  VK+ LE+  G  +VFAVK+R PK I   SR+ A+VQF +  
Sbjct: 1   MGGKTLQVSGFPSTVNADHVKDLLEQIVGTGNVFAVKLRPPKNISANSRSFAIVQFQSEA 60

Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
            A ++ N AQ+ +   G  YLK RY ERDI P PR  +F L+   LH GCL+ E  L VL
Sbjct: 61  HASLVLNAAQRNALRSGSHYLKARYAERDIVPRPRTTIFNLQGAKLHFGCLLKERVLSVL 120

Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQAA 95
           WS   V V+FGF MK+I F L   ++ YKLELSYESIW++QLH P     KFL+IQVQAA
Sbjct: 121 WSGTDVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQVQAA 180

Query: 94  PRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
           P+IYE  +     +++DP+ NYF +  DDQW
Sbjct: 181 PKIYEQNIRLSGSMYDDPLFNYFRDDTDDQW 211


>ref|XP_010917515.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
           [Elaeis guineensis] gi|743774329|ref|XP_010917516.1|
           PREDICTED: probable RNA-dependent RNA polymerase 1
           isoform X1 [Elaeis guineensis]
          Length = 1129

 Score =  213 bits (543), Expect = 1e-52
 Identities = 110/211 (52%), Positives = 140/211 (66%)
 Frame = -3

Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
           M  KT  ++GFP   TA  VK FLE + G+ ++FA+K R PK +   SRA A+VQF T++
Sbjct: 1   MGSKTTNIHGFPTTATAPSVKAFLEVHTGEGTIFALKFRLPKYVTAKSRAYAIVQFTTNR 60

Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
            AE I   A K    Y    LKVR VERDI P PR  LF+L++  LH G  +S+    VL
Sbjct: 61  HAESI---AHKHLVWYDGFVLKVRDVERDIVPKPRTSLFILENATLHFGSPVSQNKFSVL 117

Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQAA 95
           WS   VKV+FGFN++KIYFFL++G  SYK EL+YESIW++QLH    QH +FL+IQV AA
Sbjct: 118 WSAMDVKVNFGFNLRKIYFFLSRGGHSYKFELAYESIWEIQLHRSSTQHLQFLLIQVVAA 177

Query: 94  PRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
           P+IYE+   N  L+ EDPI NYF +  DDQW
Sbjct: 178 PKIYELFPRNSGLLLEDPIYNYFKDPPDDQW 208


>ref|XP_008812977.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Phoenix
           dactylifera] gi|672186025|ref|XP_008812978.1| PREDICTED:
           probable RNA-dependent RNA polymerase 1 [Phoenix
           dactylifera]
          Length = 1131

 Score =  213 bits (543), Expect = 1e-52
 Identities = 106/211 (50%), Positives = 145/211 (68%)
 Frame = -3

Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
           M  KT+ ++GFP   TA  VK FLE + G  +++A+K R PK +   SRA A+VQF+ +K
Sbjct: 1   MGSKTINIHGFPTTATAPSVKEFLEVHTGKGTIYALKFRLPKYVTAKSRAYAIVQFIANK 60

Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
            AE I   A K+        LKVR++ERDI P PR  LFVL++T +H G  +S+    VL
Sbjct: 61  HAESI---ACKRLVWVDGFVLKVRHMERDIVPKPRTSLFVLENTTVHFGSPVSQNKFSVL 117

Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQAA 95
           WS K V+V+FGF+M+KIYFFL QG+ SYK EL+YESIW++QLH    ++ +FL+IQV AA
Sbjct: 118 WSPKDVRVNFGFSMRKIYFFLVQGSHSYKFELAYESIWEIQLHHSSTKYLQFLLIQVVAA 177

Query: 94  PRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
           P++YE+ + N  L+HEDP  NYF ++ DDQW
Sbjct: 178 PKVYELSLRNSGLLHEDPEYNYFKDLPDDQW 208


>ref|XP_008644240.1| PREDICTED: putative RNA-dependent RNA polymerase isoform X1 [Zea
           mays] gi|670405152|ref|XP_008644241.1| PREDICTED:
           putative RNA-dependent RNA polymerase isoform X1 [Zea
           mays] gi|670405154|ref|XP_008644242.1| PREDICTED:
           putative RNA-dependent RNA polymerase isoform X1 [Zea
           mays]
          Length = 1108

 Score =  209 bits (533), Expect = 2e-51
 Identities = 106/213 (49%), Positives = 144/213 (67%), Gaps = 2/213 (0%)
 Frame = -3

Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
           M G+T+QV GF L  +A+ VK FLE+ AG  ++ A+K+RHP+ I   SRA A+VQF + +
Sbjct: 1   MVGRTIQVQGFALTDSAESVKLFLERIAGAGTICALKLRHPRNISANSRAFAIVQFQSQE 60

Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
            A ++ N AQ+Q    GR YL+ R  +RDI P PR  +F L+D VLHLGCL+ E  L  L
Sbjct: 61  SASLVENAAQRQVLKIGRFYLRTRPADRDIVPRPRIPMFSLEDIVLHLGCLVKENILSAL 120

Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSK--FLVIQVQ 101
           +    V V FGF+MKKIYF+L+     +KLELSYESIW++QLH P A  S+  FL+IQVQ
Sbjct: 121 FRASNVSVQFGFDMKKIYFYLSYNFTKFKLELSYESIWEMQLHRPPAYRSRTQFLLIQVQ 180

Query: 100 AAPRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
           AAP+IY+++     L+ EDP  N+F +  D+QW
Sbjct: 181 AAPKIYKLLPGRPGLMFEDPFFNWFRDDTDEQW 213


>ref|XP_006647856.1| PREDICTED: probable RNA-dependent RNA polymerase 1-like [Oryza
           brachyantha]
          Length = 1113

 Score =  207 bits (528), Expect = 6e-51
 Identities = 106/213 (49%), Positives = 139/213 (65%), Gaps = 2/213 (0%)
 Frame = -3

Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
           M GKT+QV GF L  TA+ VK+ LE+  G  +V+A+K+RHPK I   SRA A+VQF + +
Sbjct: 1   MVGKTLQVSGFSLHDTAEYVKDLLERIVGSGNVYALKLRHPKNITATSRAFAIVQFQSEE 60

Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
              ++   AQ+     GR YLKV   +RDI P PR  +F L+D  LH+GCL+ E  L  L
Sbjct: 61  HGSLVKIAAQRNILRSGRYYLKVHPSDRDIVPRPRVSMFKLEDATLHIGCLLRERVLSAL 120

Query: 274 WSFKGVKVDFGFNMKKIYFF--LTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQ 101
           WS   V V+FGFN+KKIYF   L  G+  +KLELSYESIW+++LH P    +KFL+IQV+
Sbjct: 121 WSRTKVSVEFGFNLKKIYFHLQLPSGSTEFKLELSYESIWEIELHRPPRSQTKFLLIQVE 180

Query: 100 AAPRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
           AAP+IYE       ++ EDP  NYF +  DDQW
Sbjct: 181 AAPKIYEPTPRRSGVMFEDPSFNYFRDSTDDQW 213


>gb|ACH53360.1| RNA-directed RNA polymerase 1a, partial [Hordeum vulgare]
          Length = 1114

 Score =  206 bits (525), Expect = 1e-50
 Identities = 108/211 (51%), Positives = 135/211 (63%)
 Frame = -3

Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
           M GKT+QV GFP  V    VK+ LE+  G   V AVK+R PK I   SR+ A+VQF T  
Sbjct: 1   MGGKTLQVSGFPATVNVHHVKDLLEQIVGLGKVCAVKLRPPKNISANSRSFAIVQFETEA 60

Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
            A ++ N A+  +   G +YLKVR  ERDI   PR  LF L+D  LH GCL+ E  L VL
Sbjct: 61  HASLVVNAARGNALRSGSNYLKVRPAERDIILKPRTALFNLEDATLHFGCLLRERVLSVL 120

Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQAA 95
           WS  GV V+FGF MKKI F LT   + YKLELSYESIW++QL+ P     KFL+IQV AA
Sbjct: 121 WSGTGVSVEFGFAMKKIDFCLTYNLKKYKLELSYESIWEIQLYHPPGSQKKFLLIQVMAA 180

Query: 94  PRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
           P+IYE  + +   +++DP+ NYF +  DDQW
Sbjct: 181 PKIYEQNLWHSGSMYDDPLFNYFRDDTDDQW 211


>gb|AAR91037.1| RNA-directed RNA polymerase 2 [Hordeum vulgare subsp. vulgare]
          Length = 1115

 Score =  206 bits (525), Expect = 1e-50
 Identities = 108/211 (51%), Positives = 135/211 (63%)
 Frame = -3

Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
           M GKT+QV GFP  V    VK+ LE+  G   V AVK+R PK I   SR+ A+VQF T  
Sbjct: 1   MGGKTLQVSGFPATVNVHHVKDLLEQIVGLGKVCAVKLRPPKNISANSRSFAIVQFETEA 60

Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
            A ++ N A+  +   G +YLKVR  ERDI   PR  LF L+D  LH GCL+ E  L VL
Sbjct: 61  HASLVVNAARGNALRSGSNYLKVRPAERDIILKPRTALFNLEDATLHFGCLLRERVLSVL 120

Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQAA 95
           WS  GV V+FGF MKKI F LT   + YKLELSYESIW++QL+ P     KFL+IQV AA
Sbjct: 121 WSGTGVSVEFGFAMKKIDFCLTYNLKKYKLELSYESIWEIQLYHPPGSQKKFLLIQVMAA 180

Query: 94  PRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
           P+IYE  + +   +++DP+ NYF +  DDQW
Sbjct: 181 PKIYEQNLWHSGSMYDDPLFNYFRDDTDDQW 211


>gb|EMT27792.1| Putative RNA-dependent RNA polymerase 1 [Aegilops tauschii]
          Length = 1144

 Score =  205 bits (522), Expect = 3e-50
 Identities = 105/227 (46%), Positives = 140/227 (61%), Gaps = 16/227 (7%)
 Frame = -3

Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
           M GKT+QV GFP  V A  VK+ LE+  G  +VFA+K+R PK I   S++ A+VQF +  
Sbjct: 1   MGGKTIQVSGFPSTVNADHVKDLLEQIVGTGNVFAIKLRPPKNISANSKSFAIVQFQSEA 60

Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
            A ++ N A++ +   G ++LK RY ERDI P PR  +F L+D  LH GCL+ E+ L VL
Sbjct: 61  HASLVLNAARRNALRSGSNHLKARYAERDIVPRPRTTIFNLQDATLHFGCLLREKALSVL 120

Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVI----- 110
           WS   V V+FGF MK+I F L   ++ YKLELSYESIW++QLH P     KFL+I     
Sbjct: 121 WSGTNVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQLRDF 180

Query: 109 -----------QVQAAPRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
                      QVQAAP+IYE  +     +++DP+ NYF +  DDQW
Sbjct: 181 DNLSWRNVSVSQVQAAPKIYEQNIRRSGSMYDDPLFNYFRDDTDDQW 227


>ref|XP_009381445.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Musa acuminata
           subsp. malaccensis]
          Length = 1134

 Score =  205 bits (521), Expect = 4e-50
 Identities = 106/211 (50%), Positives = 141/211 (66%)
 Frame = -3

Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
           M  KT+Q+  FP   TA++V  FLEKY G+ SV A+K+R      K S   A+VQF   +
Sbjct: 1   MTSKTIQISRFPSYATAKQVTVFLEKYTGEGSVIALKLRP----SKNSTVYAIVQFPRRE 56

Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
           D + ++   Q+   SY   YL VR +ERDI P PRK LFVL++  LH GC +S++ L VL
Sbjct: 57  DVQDLFVMIQQGKLSYDGHYLTVRNMERDIIPKPRKPLFVLENVTLHFGCPLSQKRLSVL 116

Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQAA 95
            S + VKV+FGF M+KIYF L+ G  SYKLEL+YESIW+++LH    Q+S+FLV+QV AA
Sbjct: 117 RSMEDVKVNFGFEMRKIYFLLSHGIHSYKLELAYESIWEIRLHRSSVQNSQFLVVQVVAA 176

Query: 94  PRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
           P+IYE    N   ++EDP LNYF ++ DDQW
Sbjct: 177 PKIYETPSRNTGSLYEDPRLNYFRDLPDDQW 207


>ref|NP_001183933.1| putative RNA-dependent RNA polymerase [Zea mays]
           gi|254838301|gb|ACT83377.1| putative RNA-dependent RNA
           polymerase [Zea mays]
          Length = 1108

 Score =  204 bits (519), Expect = 7e-50
 Identities = 103/213 (48%), Positives = 142/213 (66%), Gaps = 2/213 (0%)
 Frame = -3

Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
           M G+T+QV GF L  +A+ VK FLE+ AG  ++ A+K+RHP+ I   SRA A+ QF + +
Sbjct: 1   MVGRTIQVQGFALTDSAEPVKLFLERIAGAGTICALKLRHPRNISANSRAFAIAQFQSQE 60

Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
            A ++ N  Q+     GR YL+ R  +RDI P PR  +F L+D VLHLGCL+ E  L  L
Sbjct: 61  SASLVENATQRLVLKIGRFYLRTRPADRDIVPRPRIPMFSLEDIVLHLGCLVKENILSAL 120

Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSK--FLVIQVQ 101
           +    V V FGF+MKKIYF+L+     +KLELSYESIW++QLH P A  S+  FL+IQVQ
Sbjct: 121 FRASNVSVQFGFDMKKIYFYLSYNFTKFKLELSYESIWEMQLHRPPAYRSRTQFLLIQVQ 180

Query: 100 AAPRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
           AAP+IY+++     L+ EDP  N+F + +D+QW
Sbjct: 181 AAPKIYKLLPGRPGLMFEDPFFNWFRDEKDEQW 213


>ref|XP_012072325.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Jatropha curcas]
          Length = 1096

 Score =  203 bits (516), Expect = 2e-49
 Identities = 98/209 (46%), Positives = 138/209 (66%)
 Frame = -3

Query: 628 GKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSKDA 449
           GKT+ VYGFP  VT   VK FLE ++G+ +VFA+K+R  K    G R  A+VQF T++DA
Sbjct: 26  GKTIHVYGFPSHVTVDEVKKFLESHSGEGTVFAMKIRETK--NGGPRKYAIVQFQTARDA 83

Query: 448 EIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVLWS 269
           E+I +   K+ + YG SYLK R ++ DI P PR  L  +    LH GC IS+E   VLW+
Sbjct: 84  ELIISLTNKRLW-YGTSYLKARTLDNDIVPKPRTFLHSMDHITLHFGCHISKEKFSVLWT 142

Query: 268 FKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQAAPR 89
              V V+FGF M+K++FFL+ G   YKL+LSYE++W ++LHCP  +  K+L+IQ+  APR
Sbjct: 143 GTNVLVNFGFGMRKLHFFLSHGQMDYKLDLSYENVWQIELHCPRGRSVKYLLIQLYGAPR 202

Query: 88  IYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
           I+E  + + F + E P+ NYF +  D+QW
Sbjct: 203 IFEKEIAS-FNVFESPLFNYFKDTPDEQW 230


>ref|XP_010236147.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA
           polymerase 1 [Brachypodium distachyon]
          Length = 1117

 Score =  202 bits (515), Expect = 2e-49
 Identities = 108/213 (50%), Positives = 137/213 (64%), Gaps = 2/213 (0%)
 Frame = -3

Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
           M GKT+Q+ GFP +V A  VK+ LE+  G  +V+AVK+R PK I   SR+ A+VQF T +
Sbjct: 1   MGGKTLQISGFPANVHADHVKDLLEQIVGAGNVYAVKLRPPKNITANSRSFAIVQFQTEE 60

Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
            A ++ N A +   S    YLKVR  ERDI P PR  +F L    L   CL+ E  L VL
Sbjct: 61  YASLVENAAXRNVLSTESYYLKVRPAERDIVPRPRTAMFTLHGATLRFSCLLKENVLSVL 120

Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHS--KFLVIQVQ 101
           WS   V V+FGF+MKKIYF+L    + YKLELSYESIW++QLH P A  S  KFL+IQV+
Sbjct: 121 WSGTDVSVEFGFDMKKIYFYLE--CRKYKLELSYESIWEIQLHRPPAYRSQKKFLLIQVE 178

Query: 100 AAPRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
           AAP+IYE+       + EDP+ NYF +  DDQW
Sbjct: 179 AAPKIYELNQRRAGFMFEDPLFNYFRDDTDDQW 211


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  202 bits (515), Expect = 2e-49
 Identities = 103/209 (49%), Positives = 137/209 (65%)
 Frame = -3

Query: 628 GKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSKDA 449
           GKT+QVYGF  DV+A  VK FLE Y G E+V+A+K+R  K   K  RA A+VQF  S DA
Sbjct: 2   GKTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHK---KSGRAFAIVQFTRSSDA 58

Query: 448 EIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVLWS 269
            +I   A ++ + YGRSYLK R +E DI P PR  L  ++   ++ GC +SEE   VLW 
Sbjct: 59  GLIIRLANQRLY-YGRSYLKAREMETDIVPKPRVFLHTMERVTVNFGCQVSEEKFYVLWK 117

Query: 268 FKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVIQVQAAPR 89
              V ++FG  M+K+ F L+  +  YKLEL YE+IW ++L CPH+Q SK L+IQ+  APR
Sbjct: 118 ADNVTLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQLFGAPR 177

Query: 88  IYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
           IYE  VP    + +DP+LNYF ++ DDQW
Sbjct: 178 IYEKEVPASECVFDDPLLNYFKDMPDDQW 206


>ref|XP_004953848.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Setaria
           italica]
          Length = 1123

 Score =  202 bits (514), Expect = 3e-49
 Identities = 103/211 (48%), Positives = 142/211 (67%), Gaps = 2/211 (0%)
 Frame = -3

Query: 628 GKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSKDA 449
           G+T+QV GF L  +A+ VK+FLE+ AG  +V+A+K+RHP+ I   S+A A+VQF T + A
Sbjct: 2   GRTIQVSGFALTDSAEYVKDFLERIAGAGTVYALKLRHPRNITATSKAFAIVQFQTQECA 61

Query: 448 EIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVLWS 269
            ++ N AQ+ +      YLK R  +RDI P PR  +F L    LHLGCL+ E  L  L+S
Sbjct: 62  SLVENAAQRNALRSRCIYLKARPADRDIVPRPRIAMFSLDAAALHLGCLVKENILYTLFS 121

Query: 268 FKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHA--QHSKFLVIQVQAA 95
            + + V FGF+MKKIYF+L+     YKLELSYESIW++QLH P A    +KFL+ QVQAA
Sbjct: 122 VRNISVQFGFDMKKIYFYLSYNLIKYKLELSYESIWEMQLHRPPAYLSQTKFLLFQVQAA 181

Query: 94  PRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
           P+IYE++     L++EDP  N+F +  D+QW
Sbjct: 182 PKIYELLPRRSGLMYEDPFFNWFRDDTDEQW 212


>gb|EMS66194.1| RNA-dependent RNA polymerase 1 [Triticum urartu]
          Length = 1252

 Score =  201 bits (511), Expect = 6e-49
 Identities = 105/234 (44%), Positives = 139/234 (59%), Gaps = 23/234 (9%)
 Frame = -3

Query: 634 MEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQFLTSK 455
           M GKT+QV GFP  V A  VK+ LEK  G  +VFA+K+R PK I   S++ A+VQF +  
Sbjct: 1   MGGKTIQVSGFPSTVNADHVKDLLEKIVGTGNVFAIKLRPPKNISANSKSFAIVQFQSEA 60

Query: 454 DAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEETLGVL 275
            A ++ N A++ +   G ++LK RY ERDI P PR  +F L+D  LH GCL+ E+ L VL
Sbjct: 61  HASLVLNAARRNALRSGSNHLKARYAERDIVPRPRTTIFNLQDATLHFGCLLREKVLSVL 120

Query: 274 WSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVI----- 110
           WS   V V+FGF MK+I F L   ++ YKLELSYESIW++QLH P     KFL+I     
Sbjct: 121 WSGTNVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQLFLF 180

Query: 109 ------------------QVQAAPRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
                             QVQAAP+IYE  +     +++DP+ NY  +  DDQW
Sbjct: 181 IESSEIFVNLSWRNVSVSQVQAAPKIYEQNIRRSGSMYDDPLFNYSRDDTDDQW 234


>ref|XP_012072320.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha
           curcas]
          Length = 1144

 Score =  200 bits (508), Expect = 1e-48
 Identities = 99/216 (45%), Positives = 139/216 (64%)
 Frame = -3

Query: 649 SFT*NMEGKTVQVYGFPLDVTAQRVKNFLEKYAGDESVFAVKVRHPKVIGKGSRACAVVQ 470
           +F  ++ GKT+QVYGFP  VT   VK FLE ++G+ +VFA+K+R  K   +G R  A+VQ
Sbjct: 12  NFRISLMGKTIQVYGFPSHVTVDEVKKFLESHSGEGTVFAMKIRETK--NRGRRKYAIVQ 69

Query: 469 FLTSKDAEIIYNEAQKQSFSYGRSYLKVRYVERDIAPNPRKHLFVLKDTVLHLGCLISEE 290
           F T++DAE+I +   K+   YG SYLK R ++ DI P PR  L  +    LH GC IS+E
Sbjct: 70  FQTARDAELIISLTNKR-LRYGTSYLKARPLDNDIVPKPRTFLHSMDHITLHFGCQISKE 128

Query: 289 TLGVLWSFKGVKVDFGFNMKKIYFFLTQGTQSYKLELSYESIWDVQLHCPHAQHSKFLVI 110
              VLW+   V V+FGF M+K+ FFL+ G   YKLELSYE++W ++LHCP  +  K+L+I
Sbjct: 129 KFSVLWTGTNVSVNFGFGMRKLQFFLSHGQMGYKLELSYENVWQMELHCPRGRSVKYLLI 188

Query: 109 QVQAAPRIYEMVVPNLFLIHEDPILNYFMEIQDDQW 2
           Q+  APRI+E  +   F + E P+ N   +  D+QW
Sbjct: 189 QLYGAPRIFEKEIAT-FNVFEIPLFNDLKDTPDEQW 223


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