BLASTX nr result
ID: Anemarrhena21_contig00019119
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00019119
(1536 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008800338.1| PREDICTED: pentatricopeptide repeat-containi... 72 4e-17
ref|XP_010271068.1| PREDICTED: putative pentatricopeptide repeat... 57 3e-13
ref|XP_009413292.1| PREDICTED: pentatricopeptide repeat-containi... 66 8e-08
ref|XP_010909472.1| PREDICTED: putative pentatricopeptide repeat... 46 3e-06
ref|XP_003519723.2| PREDICTED: pentatricopeptide repeat-containi... 45 5e-06
gb|KHN00249.1| Pentatricopeptide repeat-containing protein, chlo... 45 5e-06
>ref|XP_008800338.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Phoenix dactylifera]
Length = 617
Score = 71.6 bits (174), Expect(3) = 4e-17
Identities = 51/121 (42%), Positives = 63/121 (52%), Gaps = 8/121 (6%)
Frame = -1
Query: 639 GVTIC*TMQNGDWSEALSHFRRMPCGGF*IDSVI*AMVTLACGKLGVLE----LNGPAVL 472
G IC TM +GDW EAL+ FR M G DSVI A V ACG+LG L L+G A+
Sbjct: 84 GAMICGTMHHGDWLEALNLFRSMRLEGIQSDSVIVATVLPACGRLGALHVGTGLHGCAIR 143
Query: 471 HRKKWICC*SLFLMHYLIV*MLVYSG----SLHPFLFIEYKNVVSWGS*TAGCSHKCEHD 304
C S LM+ M G + H F ++EYK+VVSW S AG + CE+
Sbjct: 144 SAFSDDLCVSNALMN-----MYCKCGYTRLAHHLFRYMEYKDVVSWSSLIAGYTQNCEYS 198
Query: 303 E 301
E
Sbjct: 199 E 199
Score = 45.1 bits (105), Expect(3) = 4e-17
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3
Query: 232 KQGKEIHN*AMGHGFKLDIFVASVLVDIY 146
KQGKEIH A+ HGF+ D+F+AS LVD+Y
Sbjct: 233 KQGKEIHAYAIRHGFEFDVFIASALVDLY 261
Score = 20.4 bits (41), Expect(3) = 4e-17
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2
Query: 119 EFIFDIMSGRN 87
EFIF+IMS R+
Sbjct: 271 EFIFEIMSDRD 281
>ref|XP_010271068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580 [Nelumbo nucifera]
Length = 777
Score = 56.6 bits (135), Expect(2) = 3e-13
Identities = 43/114 (37%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = -1
Query: 630 IC*TMQNGDWSEALSHFRRMPCGGF*IDSVI*AMVTLACGKLGVLELNGPAVLHRKKWIC 451
IC +QNG+W EAL FRRM G DSVI A + ACGKLG EL G +
Sbjct: 251 ICGAVQNGEWFEALCLFRRMRSEGLRPDSVIVATILPACGKLG-FELLGMGLQSCAIRSG 309
Query: 450 C*SLFLMHYLIV*MLVYSGSLH----PFLFIEYKNVVSWGS*TAGCSHKCEHDE 301
+ + ++ M G H F + +K+VVSW + AG S CE+ E
Sbjct: 310 FENDLFVSNAMIDMYCKCGDTHVARRVFYRMVFKDVVSWSTLIAGHSQNCEYYE 363
Score = 47.8 bits (112), Expect(2) = 3e-13
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -3
Query: 232 KQGKEIHN*AMGHGFKLDIFVASVLVDIYGKC*LMTELNSFLTL 101
KQGKE+HN + HGF+ D+FV S L+D+Y C M + S +
Sbjct: 397 KQGKEMHNYLLRHGFESDVFVGSALIDMYANCGSMRDAESLFQI 440
>ref|XP_009413292.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16610-like [Musa acuminata subsp. malaccensis]
Length = 742
Score = 65.9 bits (159), Expect = 8e-08
Identities = 47/121 (38%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Frame = -1
Query: 639 GVTIC*TMQNGDWSEALSHFRRMPCGGF*IDSVI*AMVTLACGKLGVLE----LNGPAVL 472
G IC TMQNGDW EAL+ FRRM GF +DSV+ A V AC +LG ++ L G ++
Sbjct: 210 GAMICGTMQNGDWLEALNLFRRMRREGFSLDSVVVATVIPACSRLGAMQIGMGLQGCSIK 269
Query: 471 HRKKWICC*SLFLMHYLIV*MLVYSG----SLHPFLFIEYKNVVSWGS*TAGCSHKCEHD 304
C S L+ M G + F + K+V+SW S AG S CE+
Sbjct: 270 SGFSDDLCVSNALID-----MYAKCGQTKTACRLFQLLALKDVISWSSLIAGYSQNCEYA 324
Query: 303 E 301
E
Sbjct: 325 E 325
>ref|XP_010909472.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial [Elaeis guineensis]
Length = 442
Score = 45.8 bits (107), Expect(3) = 3e-06
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3
Query: 232 KQGKEIHN*AMGHGFKLDIFVASVLVDIY 146
KQGKEIH A+ HGF+ D+F+AS LVD+Y
Sbjct: 58 KQGKEIHGYAIRHGFEFDVFIASALVDLY 86
Score = 31.2 bits (69), Expect(3) = 3e-06
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 372 IEYKNVVSWGS*TAGCSHKCEHDE 301
+EY +VVSW S AG S CE+ E
Sbjct: 1 MEYNDVVSWSSLIAGYSQNCEYSE 24
Score = 22.7 bits (47), Expect(3) = 3e-06
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 164 CISGYLRQMLIDDRTEFIFDIMSGRN 87
C SG +R+ EFIF+IMS R+
Sbjct: 87 CQSGSMRE------AEFIFEIMSDRD 106
>ref|XP_003519723.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 754
Score = 44.7 bits (104), Expect(2) = 5e-06
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Frame = -1
Query: 630 IC*TMQNGDWSEALSHFRRMPCGGF*IDSVI*AMVTLACGKLGVLELNGPAVLHRKKWIC 451
IC TM NG+ EAL FR+M G DSVI A + ACG+L ++L + +
Sbjct: 232 ICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGF 291
Query: 450 C*SLFLMHYLIV*MLVYSGSLHP---FLFIEYKNVVSWGS*TAGCSHKCEHDE 301
L++ + +I L F + Y +VVSW + AG S C + E
Sbjct: 292 ESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQE 344
Score = 35.0 bits (79), Expect(2) = 5e-06
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 232 KQGKEIHN*AMGHGFKLDIFVASVLVDIYGKC*LMTELNS 113
KQGKE+HN + G D+ V S L+ +Y C + E S
Sbjct: 378 KQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAES 417
>gb|KHN00249.1| Pentatricopeptide repeat-containing protein, chloroplastic [Glycine
soja]
Length = 604
Score = 44.7 bits (104), Expect(2) = 5e-06
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Frame = -1
Query: 630 IC*TMQNGDWSEALSHFRRMPCGGF*IDSVI*AMVTLACGKLGVLELN----GPAVLHRK 463
IC TM NG+ EAL FR+M G DSVI A + ACG+L ++L G AV
Sbjct: 82 ICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQGCAVRSGF 141
Query: 462 KWICC*SLFLMHYLIV*MLVYSG----SLHPFLFIEYKNVVSWGS*TAGCSHKCEHDE 301
+ S + ++ M G + F + Y +VVSW + AG S C + E
Sbjct: 142 E-----SDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQE 194
Score = 35.0 bits (79), Expect(2) = 5e-06
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 232 KQGKEIHN*AMGHGFKLDIFVASVLVDIYGKC*LMTELNS 113
KQGKE+HN + G D+ V S L+ +Y C + E S
Sbjct: 228 KQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAES 267