BLASTX nr result
ID: Anemarrhena21_contig00019090
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00019090
(956 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008799751.1| PREDICTED: RNA polymerase sigma factor sigC ... 252 2e-64
ref|XP_010909938.1| PREDICTED: RNA polymerase sigma factor sigC ... 249 3e-63
ref|XP_010244378.1| PREDICTED: RNA polymerase sigma factor sigC ... 194 6e-47
ref|XP_009395048.1| PREDICTED: RNA polymerase sigma factor sigC ... 186 2e-44
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC ... 185 5e-44
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] 172 2e-40
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu... 169 2e-39
ref|XP_011019551.1| PREDICTED: RNA polymerase sigma factor sigC ... 166 2e-38
ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC ... 166 2e-38
gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas] 166 2e-38
gb|AKC88690.1| sigma factor [Melianthus villosus] 163 2e-37
ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC ... 155 5e-35
gb|AKC88685.1| sigma factor [Francoa sonchifolia] 154 7e-35
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-... 151 6e-34
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC ... 150 1e-33
gb|AKC88689.1| sigma factor [Hypseocharis bilobata] 149 2e-33
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [... 149 2e-33
gb|AKC88698.1| sigma factor [Pelargonium exstipulatum] 147 1e-32
gb|AKC88696.1| sigma factor [Pelargonium dichondrifolium] 147 1e-32
gb|AKC88693.1| sigma factor [Pelargonium australe] 145 3e-32
>ref|XP_008799751.1| PREDICTED: RNA polymerase sigma factor sigC [Phoenix dactylifera]
Length = 567
Score = 252 bits (644), Expect = 2e-64
Identities = 167/361 (46%), Positives = 204/361 (56%), Gaps = 47/361 (13%)
Frame = +2
Query: 14 MGMGFMASYKRWAFPIQPSVPKQS-------QKHP--SALRGREAF-ESGR-STHHLSLE 160
MG GFM + KRWAFPIQ +P Q HP S R REAF E G+ S HL E
Sbjct: 1 MGFGFMVASKRWAFPIQSPLPTNPCARLLDHQHHPPSSFFRVREAFSEPGKVSLQHLFTE 60
Query: 161 GGEV-HQDILKAYTCSSGTVQNIESISLYKESSKMSDIDFYSGSYGSSRRITMNE-DASA 334
E+ H+D KA CS Q+IE++S M D G++ +R I M E D+SA
Sbjct: 61 RVELLHRDTSKACVCSFEAPQSIENMSADANEVNM-DRKLLRGAHDLNRPINMMENDSSA 119
Query: 335 YVAXXXXXXXXXXXXXMENLDKIEDILVGTDL-------------------------GTL 439
Y A MENLD+IED+ GTDL T
Sbjct: 120 YHARLTASSSLQYNLLMENLDRIEDVFAGTDLVRMQRDILVHIRRLGALKLFHACLSRTH 179
Query: 440 MAPTAINPNFLLTEHFRDCPIDFPVGKQEATTIVRTGKREERKLRRMRASSKRFDK---V 610
+ PTA N NFL +EH C ++FP+ +Q+ IVR+GK++ERKLRR RA + + +
Sbjct: 180 ITPTADNSNFLHSEHSGGCSLEFPLVEQKHNIIVRSGKKKERKLRRRRALERASEVSALL 239
Query: 611 QNSKVSALTXXXXXXXXXXXXXXXX------IARNESEMSKGVKEIADLEKTRLKLEGEI 772
+SK + T IARNESEMS+GVKE+A+LE+T +KLE +I
Sbjct: 240 GSSKKNCTTFSLPTGLGKLNNSSESRKRRVLIARNESEMSRGVKEVANLERTYIKLEEKI 299
Query: 773 GHAVSYASWAEAAGIDQKTLKQRLQFGWYCRDKLIKSTHSLVVYLARNYRGMGIAFDDLL 952
G SYA WAEAAGIDQKTL QRLQFGWYCRD+LIKST SLV+YLAR YRGMGIAFDDLL
Sbjct: 300 GQPASYARWAEAAGIDQKTLHQRLQFGWYCRDELIKSTRSLVIYLARKYRGMGIAFDDLL 359
Query: 953 Q 955
Q
Sbjct: 360 Q 360
>ref|XP_010909938.1| PREDICTED: RNA polymerase sigma factor sigC [Elaeis guineensis]
Length = 563
Score = 249 bits (635), Expect = 3e-63
Identities = 163/361 (45%), Positives = 206/361 (57%), Gaps = 47/361 (13%)
Frame = +2
Query: 14 MGMGFMASYKRWAFPIQ------PSVPKQSQKHP--SALRGRE-AFESGR-STHHLSLEG 163
MG GFM + KRWAFPIQ P HP S R RE +FE G+ S+ L E
Sbjct: 1 MGFGFMVASKRWAFPIQSPLATNPCARLLDHHHPPPSFFRVREVSFELGKVSSQRLFTER 60
Query: 164 GEV-HQDILKAYTCSSGTVQNIESISLYKESSKMSDIDFYSGSYGSSRRITM-NEDASAY 337
E+ H+D LKAY CS Q+IE++S + ++ +R I M ED+S+Y
Sbjct: 61 VELLHRDTLKAYVCSFEAPQSIENMS-----ADACKVNIDKKLLKENRPINMIEEDSSSY 115
Query: 338 VAXXXXXXXXXXXXXMENLDKIEDILVGTDL-------------------------GTLM 442
A MENL++IED+ GTDL TLM
Sbjct: 116 NARLKASSSLQYSLLMENLERIEDVFAGTDLVRLQRDILVHIRRLGALKLFHACLSRTLM 175
Query: 443 APTAINPNFLLTEHFRDCPIDFPVGKQEATTIVRTGKREERKLRRMRASSKRFDKV---- 610
APTA N N L ++H C ++FP+G+Q+ IV +GK++ERKLRR R + +R ++
Sbjct: 176 APTADNSNSLHSKHSGGCSLEFPLGEQKHNIIVHSGKKKERKLRRRRRALERASEMSALS 235
Query: 611 ----QNSKVSALTXXXXXXXXXXXXXXXX--IARNESEMSKGVKEIADLEKTRLKLEGEI 772
+N K+ +L IARNESEMS+GVKE+A+LE+TR+KLE EI
Sbjct: 236 DSSKKNCKMFSLPTGLGKLNNSSESRKRRVLIARNESEMSRGVKEVANLERTRIKLEEEI 295
Query: 773 GHAVSYASWAEAAGIDQKTLKQRLQFGWYCRDKLIKSTHSLVVYLARNYRGMGIAFDDLL 952
G SYA WAEAAGIDQKTL QRLQFGWYCRDKLIKST SLV+++AR YRGMGIAFDDLL
Sbjct: 296 GQPASYARWAEAAGIDQKTLYQRLQFGWYCRDKLIKSTRSLVMFVARKYRGMGIAFDDLL 355
Query: 953 Q 955
Q
Sbjct: 356 Q 356
>ref|XP_010244378.1| PREDICTED: RNA polymerase sigma factor sigC [Nelumbo nucifera]
gi|720088207|ref|XP_010244379.1| PREDICTED: RNA
polymerase sigma factor sigC [Nelumbo nucifera]
Length = 558
Score = 194 bits (494), Expect = 6e-47
Identities = 136/357 (38%), Positives = 187/357 (52%), Gaps = 45/357 (12%)
Frame = +2
Query: 20 MGFMASYKRWAFPIQPSVPKQS--QKHPSALRGREAFESGRSTHHLSL---EGGEVHQDI 184
MGF +K W FP+Q + S + H S +R REA+ LS+ E + +D
Sbjct: 1 MGFGLDWK-WVFPVQSHLLSHSSTRNHSSFVRSREAYFESARMSFLSVIPEESETLQKDP 59
Query: 185 LKAYTCSSGTVQNIES----ISLYKESSKMSDIDFYSGSYGSSRRITMN--EDASAYVAX 346
LKAY CSSGT+Q + + I + +SK +F++ Y + I++ ED+SA++A
Sbjct: 60 LKAYACSSGTLQPVNNGYAAIGVKMNTSK----EFHNSLYDTFEDISIATPEDSSAFLAS 115
Query: 347 XXXXXXXXXXXXMENLDKIEDILVGTDL-------------------------GTLMAPT 451
MEN++KIEDI V +DL T+ +
Sbjct: 116 LQARKISCFSLLMENVEKIEDIFVSSDLIRLEKGILVQLEKLGALNLFHACLSRTVKVSS 175
Query: 452 AINPNFLLTEHFRDCPIDFPVGKQEATTIVRTGKREERKLRRMRASSKRFDKVQNSKVSA 631
A+N + L E + +D + V + ++EERKLRR R SKR K K S
Sbjct: 176 ALNLHSALKECSKKYLMDGEMSDHVDHITVPSRRKEERKLRRER-ESKRASKKPALKSSP 234
Query: 632 L---------TXXXXXXXXXXXXXXXXIARNESEMSKGVKEIADLEKTRLKLEGEIGHAV 784
T IARNESEMS+ VKE++ LE+ R LE E+G +
Sbjct: 235 KCGIGGPQQSTISIAKRPASAKSRRLMIARNESEMSRAVKEVSCLERIRSNLEEELGRVI 294
Query: 785 SYASWAEAAGIDQKTLKQRLQFGWYCRDKLIKSTHSLVVYLARNYRGMGIAFDDLLQ 955
S++SWAEA G+D+K L+QRL FGWYCRDKL++ST SLVVYLARNYRG+GIAF+DLLQ
Sbjct: 295 SFSSWAEAVGLDEKELQQRLHFGWYCRDKLLRSTRSLVVYLARNYRGLGIAFEDLLQ 351
>ref|XP_009395048.1| PREDICTED: RNA polymerase sigma factor sigC [Musa acuminata subsp.
malaccensis]
Length = 570
Score = 186 bits (473), Expect = 2e-44
Identities = 120/309 (38%), Positives = 166/309 (53%), Gaps = 42/309 (13%)
Frame = +2
Query: 155 LEGGEV-HQDILKAYTCSSGTVQNIESISLYKESSKMSDIDFYSGSY--GSSRRITMNED 325
L+GG++ H L+A G +Q++E IS +++ +D +S ++I M E
Sbjct: 58 LDGGKLLHTSTLRANASLFGEIQSVEGIS---DNAPEVKLDGWSSRICLDLDKQIPMMEA 114
Query: 326 ASAYVAXXXXXXXXXXXXXMENLDKIEDILVGTDL------------------------- 430
+SA+ A MEN+D+IED++ G D+
Sbjct: 115 SSAFHASLTVKTPLEFNLLMENIDRIEDLIAGADMVRLERDILTHIGSLGALKLFHTSCI 174
Query: 431 -GTLMAPTAINPNFLLTEHFRDCPIDFPVGKQEATTIVRTGKREERKLRRMRASSKR--- 598
LM T + +F++ +H DCP + + ++ +TIV +GK+E+RKLRR RA K
Sbjct: 175 SRALMGSTVVYSDFMVNKHLSDCPSEPLLDDKKGSTIVHSGKKEKRKLRRARAMEKASKM 234
Query: 599 -----FDKVQNSKVSAL-----TXXXXXXXXXXXXXXXXIARNESEMSKGVKEIADLEKT 748
F K ++ +L IARNESEMS GVKEIA+LEK
Sbjct: 235 SSPQIFSKGRHLLKRSLLLEKTVSRKLLGHFESENRREVIARNESEMSMGVKEIANLEKI 294
Query: 749 RLKLEGEIGHAVSYASWAEAAGIDQKTLKQRLQFGWYCRDKLIKSTHSLVVYLARNYRGM 928
+LE EIG SY WAEAAG+D +TL+ RLQFGWYCRD LIKST SLV+++A+NYRGM
Sbjct: 295 CKELEEEIGRPPSYTRWAEAAGVDMRTLQWRLQFGWYCRDTLIKSTRSLVMFIAKNYRGM 354
Query: 929 GIAFDDLLQ 955
GIAFDDLLQ
Sbjct: 355 GIAFDDLLQ 363
>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC [Vitis vinifera]
gi|296081598|emb|CBI20603.3| unnamed protein product
[Vitis vinifera]
Length = 561
Score = 185 bits (469), Expect = 5e-44
Identities = 131/359 (36%), Positives = 190/359 (52%), Gaps = 45/359 (12%)
Frame = +2
Query: 14 MGMGFMASYKRWAFPIQ-PSVPKQ-SQKHPSALRGREA-FESGR-STHHLSLEGGE-VHQ 178
MGMGF + K W FPI P++ S+ S+++G+EA F+S R S ++ E E +++
Sbjct: 1 MGMGFRLNLK-WDFPISCPTLTNSPSRLCTSSVQGKEASFDSTRFSFPSVTSEDCESLYK 59
Query: 179 DILKAYTCSSGTVQNIESISLYKESSKMSDIDFYSGSYGSSRRIT------MNEDASAYV 340
D K + CSSG +Q E+ E+ KM S+G +I + ED SA V
Sbjct: 60 DPFKPFACSSGALQTFENDYSAMEAMKMK---IGKCSHGDLFKIVNASQAPIGEDISASV 116
Query: 341 AXXXXXXXXXXXXXMENLDKIEDILVGTDL-------------------------GTLMA 445
A +ENLD +E++ +++ TL
Sbjct: 117 AGLQASKASQFSLLLENLDILEEMFADSNMVRLERDIMVQLGRLGALKLFQICLSRTLKT 176
Query: 446 PTAINPNFLLTEHFRDCPIDFPVGKQEATTIVRTGKREERKLRRMRASSKRFDKVQNSKV 625
T+ + TEH R+C + V +VR+GK+EERK +R RA K D + +
Sbjct: 177 STSFDLFSAPTEHIRECQTNGTVDDHLDKVVVRSGKKEERKSKRERALEKA-DNIYAFPL 235
Query: 626 SALTXXXXXXXXXXXXXXXXI---------ARNESEMSKGVKEIADLEKTRLKLEGEIGH 778
+ T + A+NE+EMSKGVK +A+LE+ R LE EIGH
Sbjct: 236 PSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGH 295
Query: 779 AVSYASWAEAAGIDQKTLKQRLQFGWYCRDKLIKSTHSLVVYLARNYRGMGIAFDDLLQ 955
S ++WAEAAG+D+K L+Q+LQFGWYCRD+L++STHSLV+Y+ARNYRGMG+AF+D+LQ
Sbjct: 296 VASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDILQ 354
>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
Length = 611
Score = 172 bits (437), Expect = 2e-40
Identities = 118/327 (36%), Positives = 172/327 (52%), Gaps = 43/327 (13%)
Frame = +2
Query: 104 LRGREA-FESGR-STHHLSLEGGE-VHQDILKAYTCSSGTVQNIESISLYKESSKMSDID 274
++G+EA F+S R S ++ E E +++D K + CSSG +Q E+ E+ KM
Sbjct: 82 IQGKEASFDSTRFSFPSVTSEDCESLYKDPFKPFACSSGALQTFENDYSAMEAMKMK--- 138
Query: 275 FYSGSYGSSRRIT------MNEDASAYVAXXXXXXXXXXXXXMENLDKIEDILVGTDL-- 430
S+G +I + ED SA VA +ENLD +E++ +++
Sbjct: 139 IGKCSHGDLFKIVNASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVR 198
Query: 431 -----------------------GTLMAPTAINPNFLLTEHFRDCPIDFPVGKQEATTIV 541
TL T+ + TEH R+C + V +V
Sbjct: 199 LERDIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVVV 258
Query: 542 RTGKREERKLRRMRASSKRFDKVQNSKVSALTXXXXXXXXXXXXXXXXI---------AR 694
R+GK+EERK +R RA K D + + + T + A+
Sbjct: 259 RSGKKEERKSKRERALEKA-DNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAK 317
Query: 695 NESEMSKGVKEIADLEKTRLKLEGEIGHAVSYASWAEAAGIDQKTLKQRLQFGWYCRDKL 874
NE+EMSKGVK +A+LE+ R LE EIGH S ++WAEAAG+D+K L+Q+LQFGWYCRD+L
Sbjct: 318 NEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDEL 377
Query: 875 IKSTHSLVVYLARNYRGMGIAFDDLLQ 955
++STHSLV+Y+ARNYRGMG+AF+D+LQ
Sbjct: 378 LRSTHSLVLYIARNYRGMGVAFEDILQ 404
>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
gi|222854562|gb|EEE92109.1| hypothetical protein
POPTR_0006s25090g [Populus trichocarpa]
Length = 559
Score = 169 bits (429), Expect = 2e-39
Identities = 122/355 (34%), Positives = 179/355 (50%), Gaps = 41/355 (11%)
Frame = +2
Query: 14 MGMGFMASYKRWAFPIQPSVPKQSQKHPSAL--RGREAFESGRSTHHLSL---EGGEVHQ 178
MG+GF + K W P+Q S S+ RG EA + LS+ EG +++
Sbjct: 1 MGVGFRLTPK-WGSPMQSHSATNSTSMFSSFSARGMEASVNQARLSFLSVVSEEGDILNK 59
Query: 179 DILKAYTCSSGTVQNIESISLYKESSKMSDIDFYS----GSYGSSRRITMNEDASAYVAX 346
K++ CSS QN+E+ L E KM+ +D S + + ++++ E+ S
Sbjct: 60 HSFKSFACSSAA-QNVENDCLQMERLKMN-VDKTSHVSINNMMGNDKVSVEEEISTSHTR 117
Query: 347 XXXXXXXXXXXXMENLDKIEDILVGTD--------------LG-----------TLMAPT 451
++NLD +E ++ D LG TL
Sbjct: 118 LRERMTSRISFLLDNLDTLEKLVADLDALKLERDILLQLGRLGALEFFNACLSRTLQTSN 177
Query: 452 AINPNFLLTEHFRDCPIDFPVGKQEATTIVRTGKREERKLRRMRASSKRFDKVQNSKVSA 631
++ + + TE+ + D +G T+VRTGK+EERK RR RA+S K + + +
Sbjct: 178 VLDLSAVPTENTGESKTDGMLGDLTGKTVVRTGKKEERKFRRERAASDNGKKTTSLSLPS 237
Query: 632 LTXXXXXXXXXXXXXXXX-------IARNESEMSKGVKEIADLEKTRLKLEGEIGHAVSY 790
T IARNE++M++GVK +DLE+ R LE E G VS
Sbjct: 238 KTVQNNLPKPTFVKRTSSSSSRRSLIARNEAKMTRGVKVASDLERIRTTLEEETGQVVSL 297
Query: 791 ASWAEAAGIDQKTLKQRLQFGWYCRDKLIKSTHSLVVYLARNYRGMGIAFDDLLQ 955
+ WAEA G+D+K L+Q+LQFGWYCRD+LIK+THSLV+Y+ARNYRGMGIA +DL+Q
Sbjct: 298 SCWAEATGLDKKVLQQQLQFGWYCRDELIKNTHSLVLYIARNYRGMGIAMEDLIQ 352
>ref|XP_011019551.1| PREDICTED: RNA polymerase sigma factor sigC [Populus euphratica]
Length = 559
Score = 166 bits (421), Expect = 2e-38
Identities = 122/355 (34%), Positives = 181/355 (50%), Gaps = 41/355 (11%)
Frame = +2
Query: 14 MGMGFMASYKRWAFPIQP-SVPKQSQKHPS-ALRGREAFESGRSTHHLSL---EGGEVHQ 178
MG+GF + K W P+Q SV + S + RG EA + LS+ EG +++
Sbjct: 1 MGVGFRPTPK-WGSPMQSHSVTNSTSMFSSFSARGMEASVNQARLSFLSVVSEEGDILNK 59
Query: 179 DILKAYTCSSGTVQNIESISLYKESSKMSDIDFYS----GSYGSSRRITMNEDASAYVAX 346
K++ CSS QN+E+ L E KM+ +D S + + ++++ E+ S
Sbjct: 60 HSFKSFACSSAA-QNVENDCLQMERLKMN-VDKTSHVSINNTMGNDKVSVEEEISTSHTR 117
Query: 347 XXXXXXXXXXXXMENLDKIEDILVGTD--------------LG-----------TLMAPT 451
++NLD +E ++ D LG TL
Sbjct: 118 LRERMTSRFSFLLDNLDTLEKLVADLDALKLERDILLQLGRLGALEFFNACLSRTLQTSN 177
Query: 452 AINPNFLLTEHFRDCPIDFPVGKQEATTIVRTGKREERKLRRMRASSKRFDKVQNSKVSA 631
A++ + + TE+ + D + T+VRTGK+EERK RR RA+S K + + +
Sbjct: 178 ALDLSAVPTENTGESKTDGMLDDLTGKTVVRTGKKEERKFRRGRAASDNGKKTTSLSLPS 237
Query: 632 LTXXXXXXXXXXXXXXXX-------IARNESEMSKGVKEIADLEKTRLKLEGEIGHAVSY 790
+ IARNE++M++GVK +DLE+ R LE E G VS
Sbjct: 238 KSVQNNLQKPTFVKRTSSSSSRRSLIARNEAKMTRGVKVASDLERIRTTLEEETGQVVSL 297
Query: 791 ASWAEAAGIDQKTLKQRLQFGWYCRDKLIKSTHSLVVYLARNYRGMGIAFDDLLQ 955
+ WAEA G+D+K L+Q+LQFGWYCRD+LIK+THSLV+Y+ARNYRGMGIA +DL+Q
Sbjct: 298 SCWAEATGLDKKVLQQQLQFGWYCRDELIKNTHSLVLYIARNYRGMGIAMEDLIQ 352
>ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC [Jatropha curcas]
Length = 606
Score = 166 bits (420), Expect = 2e-38
Identities = 130/365 (35%), Positives = 174/365 (47%), Gaps = 51/365 (13%)
Frame = +2
Query: 14 MGMGFMASYKRWAFPIQPSV----PKQSQKHPSALRGREAFESGRSTHHLSL---EGGEV 172
MG+GF S K FP P + PSA++GRE + LS+ EG +
Sbjct: 43 MGLGFRLSLKL-GFPFHSQFHVNSPSRLSSSPSAVKGREGSINISRLSFLSVISEEGDNL 101
Query: 173 HQDILKAYTCSSGTVQNIESISLYKESSKMSDIDFYSGSYGSSRRITMNEDASAYVAXXX 352
H+D LK SS +Q +E+ E S++ + G S +DA ++
Sbjct: 102 HRDHLKTNAYSSSGMQTLEN-----EHSQVEEAKISVGKRSLSGLNDTIDDAQVFIKEDD 156
Query: 353 XXXXXXXXXX-------MENLDKIEDILVGTDL-------------------------GT 436
+ENL+ +E+ +D+ T
Sbjct: 157 FVPPSSSKDRTSNFSLLLENLNILEESFADSDVLKLERDILLQLGKLGALKLFNTCLTRT 216
Query: 437 LMAPTAINPNF--LLTEHFRDCPIDFPVGKQEATTIVRTGKREERKLRRMRASSKRFDKV 610
L TA +F L TE+ ++C D IV TGK+EERK RR RAS K KV
Sbjct: 217 LEVQTANVLDFSDLPTENIQECKRDGTSNGNVYKIIVCTGKKEERKSRRERASLKNGHKV 276
Query: 611 ----------QNSKVSALTXXXXXXXXXXXXXXXXIARNESEMSKGVKEIADLEKTRLKL 760
QN + A + IARNE+EMS+GVK +A+LEK R L
Sbjct: 277 PCFPLPLKSIQNGRGKATSFDKKTSNSKSRRLM--IARNEAEMSRGVKVLANLEKIRTTL 334
Query: 761 EGEIGHAVSYASWAEAAGIDQKTLKQRLQFGWYCRDKLIKSTHSLVVYLARNYRGMGIAF 940
E E G AVS + WAEAAG+D K L+Q+L FGWYCRD+L++ST SLV++LARNYRGMGIA
Sbjct: 335 EQETGRAVSLSCWAEAAGLDMKVLQQQLHFGWYCRDELVRSTRSLVLFLARNYRGMGIAL 394
Query: 941 DDLLQ 955
+DLLQ
Sbjct: 395 EDLLQ 399
>gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas]
Length = 564
Score = 166 bits (420), Expect = 2e-38
Identities = 130/365 (35%), Positives = 174/365 (47%), Gaps = 51/365 (13%)
Frame = +2
Query: 14 MGMGFMASYKRWAFPIQPSV----PKQSQKHPSALRGREAFESGRSTHHLSL---EGGEV 172
MG+GF S K FP P + PSA++GRE + LS+ EG +
Sbjct: 1 MGLGFRLSLKL-GFPFHSQFHVNSPSRLSSSPSAVKGREGSINISRLSFLSVISEEGDNL 59
Query: 173 HQDILKAYTCSSGTVQNIESISLYKESSKMSDIDFYSGSYGSSRRITMNEDASAYVAXXX 352
H+D LK SS +Q +E+ E S++ + G S +DA ++
Sbjct: 60 HRDHLKTNAYSSSGMQTLEN-----EHSQVEEAKISVGKRSLSGLNDTIDDAQVFIKEDD 114
Query: 353 XXXXXXXXXX-------MENLDKIEDILVGTDL-------------------------GT 436
+ENL+ +E+ +D+ T
Sbjct: 115 FVPPSSSKDRTSNFSLLLENLNILEESFADSDVLKLERDILLQLGKLGALKLFNTCLTRT 174
Query: 437 LMAPTAINPNF--LLTEHFRDCPIDFPVGKQEATTIVRTGKREERKLRRMRASSKRFDKV 610
L TA +F L TE+ ++C D IV TGK+EERK RR RAS K KV
Sbjct: 175 LEVQTANVLDFSDLPTENIQECKRDGTSNGNVYKIIVCTGKKEERKSRRERASLKNGHKV 234
Query: 611 ----------QNSKVSALTXXXXXXXXXXXXXXXXIARNESEMSKGVKEIADLEKTRLKL 760
QN + A + IARNE+EMS+GVK +A+LEK R L
Sbjct: 235 PCFPLPLKSIQNGRGKATSFDKKTSNSKSRRLM--IARNEAEMSRGVKVLANLEKIRTTL 292
Query: 761 EGEIGHAVSYASWAEAAGIDQKTLKQRLQFGWYCRDKLIKSTHSLVVYLARNYRGMGIAF 940
E E G AVS + WAEAAG+D K L+Q+L FGWYCRD+L++ST SLV++LARNYRGMGIA
Sbjct: 293 EQETGRAVSLSCWAEAAGLDMKVLQQQLHFGWYCRDELVRSTRSLVLFLARNYRGMGIAL 352
Query: 941 DDLLQ 955
+DLLQ
Sbjct: 353 EDLLQ 357
>gb|AKC88690.1| sigma factor [Melianthus villosus]
Length = 558
Score = 163 bits (412), Expect = 2e-37
Identities = 123/352 (34%), Positives = 175/352 (49%), Gaps = 38/352 (10%)
Frame = +2
Query: 14 MGMGFMASYKRWAFPIQ--PSVPKQSQKHPSALRGREAFESGRSTHHLSL---EGGEVHQ 178
MG+GF K W FP+Q P S+ S++RGREA+ S S LS EG ++
Sbjct: 1 MGIGFKLHLK-WGFPLQSHPLPDSPSRLSSSSVRGREAYISSASLSFLSNISEEGDTCYR 59
Query: 179 DILKAYTCSSGTVQNIESISLYKESSKMSDIDFYSGSY------GSSRRITMNEDASAYV 340
++L A CS + Q ++ SL E K++ I SGS G+ R + E
Sbjct: 60 NLLNAKACSFASPQTLDGGSLKFEEMKIN-IGKRSGSNLRNMIDGNQR---LGEGRYTSQ 115
Query: 341 AXXXXXXXXXXXXXMENLDKIEDILVGTDLG-------------------------TLMA 445
++NLD +E V +++ TL A
Sbjct: 116 ISLETCNISQFRLLVQNLDTLEGTFVDSNISLLEKDILKQLEKLGARKLFDTRLSRTLRA 175
Query: 446 PTAINPNFLLTEHFRDCPIDFPVGKQEATTIVRTGKREERKLRRMRAS--SKRFDKVQNS 619
+ + + + +D + +G Q T V +GK+ ERK RR RAS S + + +
Sbjct: 176 SNLFDLSDVPIGNIKDPETNTIMGDQIGKTFVCSGKKAERKSRRARASENSNKMSSI-SL 234
Query: 620 KVSALTXXXXXXXXXXXXXXXXIARNESEMSKGVKEIADLEKTRLKLEGEIGHAVSYASW 799
+ A+ IARNE+EMS+GVK IADLE+ + LE E G + +SW
Sbjct: 235 PLKAVRKGFQKPTLSSRGRRTMIARNEAEMSRGVKVIADLERIKTILEKETGRIATLSSW 294
Query: 800 AEAAGIDQKTLKQRLQFGWYCRDKLIKSTHSLVVYLARNYRGMGIAFDDLLQ 955
AEAAG+D+K L Q L +GWYCRD+L++ST SLV+YLARNYRG+GIA +DLLQ
Sbjct: 295 AEAAGVDKKDLHQHLLYGWYCRDELLRSTRSLVLYLARNYRGLGIAHEDLLQ 346
>ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
tomentosiformis]
Length = 572
Score = 155 bits (391), Expect = 5e-35
Identities = 118/356 (33%), Positives = 170/356 (47%), Gaps = 42/356 (11%)
Frame = +2
Query: 14 MGMGFMASYKRWAFPIQPSVPKQSQKHPSA--LRGREA-FESGRSTHHLSLEGGEV-HQD 181
+ MGF Y +W F +QP S PS+ +G+EA ++ RS E E H D
Sbjct: 16 LAMGFRL-YLKWGFSVQPPFSSNSSSWPSSHSFKGKEALYDPARSLKPFINEDCEPSHSD 74
Query: 182 ILKAYTCSSG----TVQNIESISLYKESSKMSDIDFYSGSYGSSRR-ITMNEDASAYVAX 346
+ TC S T + + + S + Y G GS + I+++ + Y+
Sbjct: 75 PFRVRTCLSDPQLWTSDTSVTTEIKTRIGRGSPTNIY-GDIGSPKNVISLDGEKPTYL-- 131
Query: 347 XXXXXXXXXXXXMENLDKIEDILVGTDLGTLMAPTAINPNFL-LTEHFRDC--------- 496
M+NLD +E++ +++ L + + L E F C
Sbjct: 132 -NTTRALHFSLLMKNLDLLENMFADSEVSRLERDIMVQLDKLGALEFFHTCLSRTNHCST 190
Query: 497 ---PIDFP------------VGKQEATTIVRTGKREERKLRRMRASSKRFD--------K 607
+D P VG +VR+ K++ERK RR RAS D K
Sbjct: 191 FPEVLDVPRELIEEIEKDGLVGNGIDKVVVRSKKKQERKSRRNRASRNANDIITVQPHTK 250
Query: 608 VQNSKVSALTXXXXXXXXXXXXXXXXIARNESEMSKGVKEIADLEKTRLKLEGEIGHAVS 787
+ IA+NE+EMS+GVK +A+LE+ R LE E G S
Sbjct: 251 NIQEDLQQPKFFSGKRTHTSRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVAS 310
Query: 788 YASWAEAAGIDQKTLKQRLQFGWYCRDKLIKSTHSLVVYLARNYRGMGIAFDDLLQ 955
++SWAEAAG++QK L+QRL FGWYCRD+L+KST SLV+YLARNYRG+G+AF+DL+Q
Sbjct: 311 FSSWAEAAGVEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQ 366
>gb|AKC88685.1| sigma factor [Francoa sonchifolia]
Length = 540
Score = 154 bits (390), Expect = 7e-35
Identities = 118/337 (35%), Positives = 166/337 (49%), Gaps = 25/337 (7%)
Frame = +2
Query: 20 MGFMASYKRWAFPIQP-SVPKQ-SQKHPSALRGREAFESGRSTHHLSL---EGGEVHQDI 184
MGF + K W FPIQ S+P S+ S++RGREA + LS+ EG + + +
Sbjct: 1 MGFRLNLK-WGFPIQSHSLPNSPSRLCSSSVRGREASINSARLSFLSIISEEGETLRRVL 59
Query: 185 LKAYTCSSGTVQNIESISLY--------KESSKMSDIDFYSGSYGSSRRITMNEDASAYV 340
+KAY CS Q +E +L+ +E S + + R + N D V
Sbjct: 60 VKAYACSFAARQMLEKENLHSMIDDNPTEEGKSTSQMSVEARKASHFRLLVQNLD----V 115
Query: 341 AXXXXXXXXXXXXXMENLDKIEDILVGTDLGTLMAPTAINPNFLLT---EHFRDCPIDFP 511
+ L ++E + T ++ T + N L EH +
Sbjct: 116 LEKTFADSSVLRLESDILLQLERLGARNLFDTCLSKTLEDSNDLSNVPIEHMEEQKTVIA 175
Query: 512 VGKQEATTIVRTGKREERKLRRMRASSKRFDKVQNSKVSALTXXXXXXXXXXXXXXXX-- 685
+ Q V + K+EERK +R RAS K+ + + + T
Sbjct: 176 MDDQIGKIFVCSRKKEERKSKRARASENA-SKISSMPLRSKTARKGYQQPAHSSSKRGSN 234
Query: 686 -------IARNESEMSKGVKEIADLEKTRLKLEGEIGHAVSYASWAEAAGIDQKTLKQRL 844
IARNE+EMS+GVK I DLE+ R LE E G VS ++WAEAAGID+K L Q L
Sbjct: 235 SRGRRLMIARNEAEMSRGVKVIQDLERIRTTLEKETGRVVSLSTWAEAAGIDEKVLNQDL 294
Query: 845 QFGWYCRDKLIKSTHSLVVYLARNYRGMGIAFDDLLQ 955
++GWYCRD+L++ST SLV+YLARNYRG+GIA +DLLQ
Sbjct: 295 RYGWYCRDELLRSTRSLVLYLARNYRGLGIASEDLLQ 331
>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum tuberosum]
Length = 555
Score = 151 bits (382), Expect = 6e-34
Identities = 118/351 (33%), Positives = 160/351 (45%), Gaps = 39/351 (11%)
Frame = +2
Query: 20 MGFMASYKRWAFPIQPSVPKQSQKHPSA--LRGREA-FESGRSTHHLSLEGGEV-HQDIL 187
MGF K W F +QP S PS+ +GREA ++ RS E H D
Sbjct: 1 MGFRLHLK-WGFSVQPPFSSNSSSWPSSHSFKGREALYDPARSLKPFITGDCEPSHSDPF 59
Query: 188 KAYTCSSGTVQNIESISLYKESSKMSDIDFYSGSYGS--SRRITMNEDASAYVAXXXXXX 361
+ TC S S+ E + S YG S +I ++ D
Sbjct: 60 RVQTCLSDPQLWTSDTSVTTEIKTRNGRGSPSNVYGDIGSHKIGISPDGEK-PTYLNTTK 118
Query: 362 XXXXXXXMENLDKIEDILVGTDLGTLMAPTAINPNFL-LTEHFRDC------------PI 502
M+NLD +E++ +++ L + L E F C +
Sbjct: 119 SLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSTFPKVL 178
Query: 503 DFP------------VGKQEATTIVRTGKREERKLRRMRASSKRFD--------KVQNSK 622
D P VG +VR+ K++ERK RR RAS D K
Sbjct: 179 DVPRELIKEVEKDDLVGNAIDKVVVRSRKKQERKSRRNRASRNANDIITVQPHTKNIQED 238
Query: 623 VSALTXXXXXXXXXXXXXXXXIARNESEMSKGVKEIADLEKTRLKLEGEIGHAVSYASWA 802
+ IA+NE+EMS+GVK +A LE+ R LE E G +++SWA
Sbjct: 239 LQQPKFYSGKRTQASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATFSSWA 298
Query: 803 EAAGIDQKTLKQRLQFGWYCRDKLIKSTHSLVVYLARNYRGMGIAFDDLLQ 955
EAAGI+QK L+QRL FGWYCRD+L+KST SLV+YLARNYRG+G+AF+DL+Q
Sbjct: 299 EAAGIEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQ 349
>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC [Solanum lycopersicum]
Length = 551
Score = 150 bits (379), Expect = 1e-33
Identities = 112/349 (32%), Positives = 160/349 (45%), Gaps = 37/349 (10%)
Frame = +2
Query: 20 MGFMASYKRWAFPIQPSVPKQSQKHPSA--LRGREA-FESGRSTH-HLSLEGGEVHQDIL 187
MGF K W F +QP S PS+ +GRE ++ RS ++ + H D
Sbjct: 1 MGFRLHLK-WGFSLQPPFSSNSSSWPSSHSFKGRETLYDPARSLKPFINGDCEPSHSDPF 59
Query: 188 KAYTCSSGTVQNIESISLYKESSKMSDIDFYSGSYGSSRRITMNEDASAYVAXXXXXXXX 367
+ TC S S+ E+ + S YG ++ + Y+
Sbjct: 60 RVQTCLSDPQLWTSDASVTTETKTRNGRGSPSNVYGDIGSYKIDGEKPTYL---NTTKSL 116
Query: 368 XXXXXMENLDKIEDILVGTDLGTLMAPTAINPNFL-LTEHFRDC------------PIDF 508
M+NLD +E++ +++ L + L E F C +D
Sbjct: 117 HFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSSFPKVLDV 176
Query: 509 P------------VGKQEATTIVRTGKREERKLRRMRASSKRFDKVQ--------NSKVS 628
P VG +VR+ K++ER RR RAS D + +
Sbjct: 177 PRELIKEVEKDDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPHTKNIQEDLQ 236
Query: 629 ALTXXXXXXXXXXXXXXXXIARNESEMSKGVKEIADLEKTRLKLEGEIGHAVSYASWAEA 808
L IA+NE+EMSKGVK +A LE+ R LE E G +++SWA+A
Sbjct: 237 QLKFYSGKRTHASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQVATFSSWAKA 296
Query: 809 AGIDQKTLKQRLQFGWYCRDKLIKSTHSLVVYLARNYRGMGIAFDDLLQ 955
AGI+QK L+Q L FGWYCRD+L+KST SLV+YLARNYRG+G+AF+DL+Q
Sbjct: 297 AGIEQKELQQHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQ 345
>gb|AKC88689.1| sigma factor [Hypseocharis bilobata]
Length = 566
Score = 149 bits (377), Expect = 2e-33
Identities = 114/346 (32%), Positives = 161/346 (46%), Gaps = 44/346 (12%)
Frame = +2
Query: 50 AFPIQPS-VPKQSQKHPSALRGREAFESGRSTHHLSL---EGGEVHQDILKAYTCSSGTV 217
+ P PS +P S S++ REA + LS+ EG + H+D LKAY S
Sbjct: 17 SLPTAPSRLPASSSSSSSSVHAREASFNTTRLFFLSIISEEGEKSHKDPLKAYASSYAAP 76
Query: 218 QNIESISLYKESSKMSDIDFYSGSYGSSRRIT------MNEDASAYVAXXXXXXXXXXXX 379
Q + + L +M ++ SYG I + E S+
Sbjct: 77 QTLGNDFL-----EMGEMQSNKRSYGGLHSIIEDTLMHVGEGISSSGTSLRVSRPAHFSL 131
Query: 380 XMENLDKIEDILVGTD-----------LGTLMAPTAINP---------------NFLLTE 481
MENLD +E+ + LG L A N + + TE
Sbjct: 132 LMENLDVLEETFADKNVLRLERDILLQLGRLGALKLFNIFLSSRTIETSNIFDLSDVPTE 191
Query: 482 HFRDCPIDFPVGKQEATTIVRTGKREERKLRRMRAS--SKRFD------KVQNSKVSALT 637
+DC ++ ++ I +GK+E+RK RR R S SK+ K S +
Sbjct: 192 DIKDCKVNSTKHERITKKIFHSGKKEKRKSRRARVSENSKKISSLLLPSKTIQSGFQQPS 251
Query: 638 XXXXXXXXXXXXXXXXIARNESEMSKGVKEIADLEKTRLKLEGEIGHAVSYASWAEAAGI 817
IARNE+EM++GVKEIA+LE+ R LE G S + WAEAAG+
Sbjct: 252 ISSAKRASNSRSRILMIARNEAEMARGVKEIAELERIRTTLEDGTGQVASISCWAEAAGL 311
Query: 818 DQKTLKQRLQFGWYCRDKLIKSTHSLVVYLARNYRGMGIAFDDLLQ 955
D K L+QRL FGWYC+D+L++ST SL++YL R YRG+G+AF+DLLQ
Sbjct: 312 DPKVLRQRLHFGWYCQDELLRSTRSLIIYLTRYYRGVGVAFEDLLQ 357
>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 560
Score = 149 bits (377), Expect = 2e-33
Identities = 118/356 (33%), Positives = 165/356 (46%), Gaps = 42/356 (11%)
Frame = +2
Query: 14 MGMGFMASYKRWAFPIQ-PSVPKQSQKHPSA--LRGREAFESGRSTHHLSL---EGGEVH 175
MG GF + K FP P+ P + PS+ +RGREA LS+ EG H
Sbjct: 1 MGFGFRLNLKL-DFPFHSPNSPSRLSSSPSSSFVRGREATSYQSRLSFLSVISEEGDIAH 59
Query: 176 QDILKAYTCSSGTVQNIESISLYKESSKMS--DIDFYSGSYGSSRRITMNEDASAYVAXX 349
+D LK Y S VQ +E+ E K++ + + +++ ED +
Sbjct: 60 RDPLKTYAYSYA-VQTVENEHSQGEGFKVNFGKRSHFGLNIIGDAEVSLKEDIFVSPSST 118
Query: 350 XXXXXXXXXXXMENLDKIEDILVGTDLG-------------------------TLMAPTA 454
+ENL+ +E +D TL
Sbjct: 119 KERTSRFSLL-LENLNILEQSFADSDASKLEEDILLQLGKLGALKLFNTCLTRTLETTNV 177
Query: 455 INPNFLLTEHFRDCPIDFPVGKQEATTIVRTGKREERKLRRMRASSKRFDKVQNSKVSAL 634
+ + + TE +C I+ + +V T K+EERK RR RAS+++ K + + +
Sbjct: 178 LEVSDVHTEIIGECNINGTSINNQIKVVVHTAKKEERKSRRERASARKGHKSPSLPLPSR 237
Query: 635 ---------TXXXXXXXXXXXXXXXXIARNESEMSKGVKEIADLEKTRLKLEGEIGHAVS 787
T IARNE+EM++G+K +ADLEK R LE E VS
Sbjct: 238 PIQSGSEKPTVSSGKKASKSKSRRLIIARNEAEMARGIKVLADLEKIRTTLEEETERVVS 297
Query: 788 YASWAEAAGIDQKTLKQRLQFGWYCRDKLIKSTHSLVVYLARNYRGMGIAFDDLLQ 955
+ WAEAAG+D K L+Q+L FGWYCRD+LIKST SLV+Y ARNYRG GIA +DLLQ
Sbjct: 298 LSCWAEAAGLDVKVLQQQLSFGWYCRDELIKSTRSLVLYFARNYRGTGIALEDLLQ 353
>gb|AKC88698.1| sigma factor [Pelargonium exstipulatum]
Length = 559
Score = 147 bits (371), Expect = 1e-32
Identities = 114/351 (32%), Positives = 166/351 (47%), Gaps = 47/351 (13%)
Frame = +2
Query: 44 RWAFPIQP-SVPKQSQKHPSALRGREAFESGRSTHHLSL-----EGGEVHQDILKAYTCS 205
+W PI S P + PS++RG+EA +G LS E H++ LK Y S
Sbjct: 8 KWDIPIHSRSFPTSPSRLPSSVRGKEASFNGTRLLFLSFIPDEGENSHSHREPLKGYASS 67
Query: 206 SGTVQNIESISLYKESSKMSDIDFYSGSYGS-------SRRITMNEDASAYVAXXXXXXX 364
S Q +++ + +++ D+ S SRR+T E S+ A
Sbjct: 68 SAAPQTLDN-----DFTEIRDLQINKRSCNGRHSMIEDSRRLT-EEGISSSRASLPACRP 121
Query: 365 XXXXXXMENLDKIEDILVGTD--------------LG------------TLMAPTAINPN 466
MENLD +E+ ++ LG T+ A++ +
Sbjct: 122 AHFGMLMENLDVLEETFADSNALRLERDILLQVQRLGALKLFNICLSSRTIETSNAVDLS 181
Query: 467 FLLTEHFRDCPIDFPVGKQEATTIVRTGKREERKLRRMR--------ASSKRFDKVQNSK 622
+ E +DC +GK+ IVR+GK+++RK RR R +S K S
Sbjct: 182 DVPIEGIKDCTSRL-MGKR----IVRSGKKDKRKSRRERVLENQKKISSLSLLKKTTQSC 236
Query: 623 VSALTXXXXXXXXXXXXXXXXIARNESEMSKGVKEIADLEKTRLKLEGEIGHAVSYASWA 802
+ IA+NE+EM++GVKE+ DLE+ R LE G + WA
Sbjct: 237 FQQPSISSAKRASHSRSRRLMIAKNEAEMARGVKEMGDLERIRTTLEEATGQVARLSCWA 296
Query: 803 EAAGIDQKTLKQRLQFGWYCRDKLIKSTHSLVVYLARNYRGMGIAFDDLLQ 955
EAAG++ K L++RLQFGW CRD+LI+ST SLV+YLAR YRG G+AF+DLLQ
Sbjct: 297 EAAGLEPKVLQRRLQFGWQCRDELIRSTRSLVIYLARYYRGPGVAFEDLLQ 347
>gb|AKC88696.1| sigma factor [Pelargonium dichondrifolium]
Length = 559
Score = 147 bits (370), Expect = 1e-32
Identities = 114/351 (32%), Positives = 164/351 (46%), Gaps = 47/351 (13%)
Frame = +2
Query: 44 RWAFPIQP-SVPKQSQKHPSALRGREAFESGRSTHHLSL-----EGGEVHQDILKAYTCS 205
+W PI S P + PS++RG+EA +G LS E H++ LK Y S
Sbjct: 8 KWDIPIHSRSFPTSPSRLPSSVRGKEASFNGTRLLFLSFIPDEDENSHSHREPLKGYASS 67
Query: 206 SGTVQNIESISLYKESSKMSDIDFYSGSYGS-------SRRITMNEDASAYVAXXXXXXX 364
S Q +++ + +M D+ S SRR+T E S+ A
Sbjct: 68 SAAPQTLDN-----DFIEMRDLQINKRSCNGRHSMIEDSRRLT-EEGISSSRASLPACRP 121
Query: 365 XXXXXXMENLDKIEDILVGTD--------------LG------------TLMAPTAINPN 466
MENLD +E+ ++ LG T+ A++ +
Sbjct: 122 AHFGMLMENLDVLEETFADSNALRLERDILLQVQRLGALKLFNICLSSRTIETSNAVDLS 181
Query: 467 FLLTEHFRDCPIDFPVGKQEATTIVRTGKREERKLRRMRASSKR--------FDKVQNSK 622
+ E +DC +GK+ IVR+GK+++RK RR R + K S
Sbjct: 182 DVPIEGIKDCTSRL-MGKR----IVRSGKKDKRKSRRERVLENQKKISSLLLLKKTTQSC 236
Query: 623 VSALTXXXXXXXXXXXXXXXXIARNESEMSKGVKEIADLEKTRLKLEGEIGHAVSYASWA 802
+ IA+NE+EM++GVKE+ DLE+ R LE G + WA
Sbjct: 237 FQQPSISSAKRASHSRSRRLMIAKNEAEMARGVKEMGDLERIRTTLEEATGQVARLSCWA 296
Query: 803 EAAGIDQKTLKQRLQFGWYCRDKLIKSTHSLVVYLARNYRGMGIAFDDLLQ 955
EAAG++ K L++RLQFGW CRD+LI+ST SLV+YLAR YRG G+AF+DLLQ
Sbjct: 297 EAAGLEPKVLQRRLQFGWQCRDELIRSTRSLVIYLARYYRGPGVAFEDLLQ 347
>gb|AKC88693.1| sigma factor [Pelargonium australe]
Length = 566
Score = 145 bits (367), Expect = 3e-32
Identities = 116/353 (32%), Positives = 167/353 (47%), Gaps = 49/353 (13%)
Frame = +2
Query: 44 RWAFPIQP-SVPKQSQKHPSA--LRGREAFESGRSTHHLSL---EG------GEVHQDIL 187
+W PI S P + PS+ +RG+EA +G LS EG H++ L
Sbjct: 8 KWDIPIHSRSFPTSPSRLPSSSSVRGKEASFNGTRLLFLSFIPDEGENSHSHSHSHRETL 67
Query: 188 KAYTCSSGTVQNIESISLYKESSKMSDIDFYSGSYGS---SRRITMNEDASAYVAXXXXX 358
K Y SS Q +++ + +++ YSG + + SRR T E S+ A
Sbjct: 68 KVYASSSAAPQTLDNDFIELRDMQINKRS-YSGLHSTIEDSRRHT-EEGISSSRASLRAC 125
Query: 359 XXXXXXXXMENLDKIEDILVGTD--------------LG------------TLMAPTAIN 460
MENLD +E+ ++ LG T+ ++
Sbjct: 126 RPAHFGMLMENLDVLEETFADSNALRLERDILQQVERLGALKLFNICLSSRTIETSNVVD 185
Query: 461 PNFLLTEHFRDCPIDFPVGKQEATTIVRTGKREERKLRRMR--------ASSKRFDKVQN 616
+ E +DC P+GK+ +VR+GK+++RK R R +S K
Sbjct: 186 LFDVSIEGIKDCTTSRPIGKR----VVRSGKKDKRKSSRERVLENQKKISSLSLLKKTTQ 241
Query: 617 SKVSALTXXXXXXXXXXXXXXXXIARNESEMSKGVKEIADLEKTRLKLEGEIGHAVSYAS 796
S + IA+NE+EM++GVK +ADLE+ R LE G V +
Sbjct: 242 SCFQQPSISSAKRASHSRSRRLMIAKNEAEMARGVKVMADLERIRTTLEEATGQVVRLSC 301
Query: 797 WAEAAGIDQKTLKQRLQFGWYCRDKLIKSTHSLVVYLARNYRGMGIAFDDLLQ 955
WAEAAG++ K L+QRLQFGW CRD+LI+ST SLV+YLAR YRG G+AF+DLLQ
Sbjct: 302 WAEAAGLEPKVLQQRLQFGWQCRDELIRSTRSLVIYLARYYRGPGVAFEDLLQ 354