BLASTX nr result

ID: Anemarrhena21_contig00018853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00018853
         (502 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008777273.1| PREDICTED: pentatricopeptide repeat-containi...   120   5e-25
ref|XP_009383035.1| PREDICTED: pentatricopeptide repeat-containi...   110   5e-22

>ref|XP_008777273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Phoenix dactylifera]
          Length = 544

 Score =  120 bits (300), Expect = 5e-25
 Identities = 60/119 (50%), Positives = 75/119 (63%)
 Frame = -2

Query: 357 HALLIVAGRCRSKPISRQLIHQFSRENWPPNXXXXXXXXXXXXXSPDPIASNYILKSLVR 178
           H LLIV G    K ++R+L+  + R +                  PDP+ASN ILK+LVR
Sbjct: 39  HGLLIVFGAAFDKLVARRLVALYCRRS--AGALDYALLLHSHLRHPDPVASNLILKNLVR 96

Query: 177 RCSPSGAVEFFACRVHPAGCRPSLCTFPLLITAAKLNQSIHQGESFHCLALKLGFFSHL 1
           R  PS  + F+  + H AGCRPS CTFPLL+TA KL  SIH+GE+FHCLA+KLGF SHL
Sbjct: 97  RAQPSDVIAFYCRQAHLAGCRPSRCTFPLLVTAVKLRDSIHEGEAFHCLAIKLGFLSHL 155


>ref|XP_009383035.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Musa acuminata subsp. malaccensis]
          Length = 550

 Score =  110 bits (274), Expect = 5e-22
 Identities = 62/121 (51%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
 Frame = -2

Query: 357 HALLIVAGRCR-SKPISRQLIHQFSRENWPPNXXXXXXXXXXXXXSPDPIASNYILKSLV 181
           HALL+V+G     K ++R+L   +SR +                 SPDPI S +++KSLV
Sbjct: 47  HALLVVSGAVPFHKQVNRRLAALYSRLS-----PDDAVLLHCQLRSPDPIISGFVIKSLV 101

Query: 180 RRC-SPSGAVEFFACRVHPAGCRPSLCTFPLLITAAKLNQSIHQGESFHCLALKLGFFSH 4
           RR   PS  V FF   VHP GCRPS CTFPLLIT++K ++SIHQGE  HCLALKLGF  H
Sbjct: 102 RRRRDPSDVVAFFCRHVHPVGCRPSRCTFPLLITSSKFSESIHQGEILHCLALKLGFLGH 161

Query: 3   L 1
           L
Sbjct: 162 L 162


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