BLASTX nr result
ID: Anemarrhena21_contig00016458
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00016458
(2957 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008784482.1| PREDICTED: DNA-directed RNA polymerases IV a... 1342 0.0
ref|XP_010937061.1| PREDICTED: DNA-directed RNA polymerases IV a... 1330 0.0
ref|XP_009413518.1| PREDICTED: DNA-directed RNA polymerases IV a... 1305 0.0
ref|XP_012703111.1| PREDICTED: DNA-directed RNA polymerases IV a... 1219 0.0
ref|XP_003577435.2| PREDICTED: DNA-directed RNA polymerases IV a... 1214 0.0
ref|XP_010237620.1| PREDICTED: DNA-directed RNA polymerases IV a... 1214 0.0
ref|XP_003564776.1| PREDICTED: DNA-directed RNA polymerases IV a... 1211 0.0
gb|EMS61833.1| DNA-directed RNA polymerase D subunit 2a [Triticu... 1211 0.0
ref|NP_001054041.1| Os04g0641000, partial [Oryza sativa Japonica... 1196 0.0
emb|CAE05960.2| OSJNBa0063C18.1 [Oryza sativa Japonica Group] 1196 0.0
gb|AFW59623.1| putative DNA-directed RNA polymerase subunit fami... 1196 0.0
ref|XP_002468227.1| hypothetical protein SORBIDRAFT_01g042100 [S... 1196 0.0
ref|XP_006652896.1| PREDICTED: DNA-directed RNA polymerases IV a... 1192 0.0
ref|XP_002447199.1| hypothetical protein SORBIDRAFT_06g030300 [S... 1190 0.0
gb|ADB19860.1| mutant required to maintain repression 7-3/RNA po... 1187 0.0
ref|NP_001177299.1| required to maintain repression7 [Zea mays] ... 1187 0.0
tpg|DAA35758.1| TPA: putative DNA-directed RNA polymerase subuni... 1187 0.0
gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA p... 1184 0.0
emb|CAJ86030.1| B0414F07.4 [Oryza sativa Indica Group] 1183 0.0
emb|CAD41847.2| OSJNBb0079B02.6 [Oryza sativa Japonica Group] 1182 0.0
>ref|XP_008784482.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Phoenix dactylifera]
Length = 1189
Score = 1342 bits (3472), Expect = 0.0
Identities = 655/908 (72%), Positives = 757/908 (83%), Gaps = 13/908 (1%)
Frame = -1
Query: 2687 IMETDENNDPMNLAPPDFKMKYLDMNVETLERFCKDASRSFFNEYGLIHHQITSYNQFIT 2508
+ +T + +PMN+ P+ ++ L+MNV +LE+FCK+A+RSFF E+GLI HQI SYN+FI
Sbjct: 3 VEQTPDGPEPMNVDSPNNGIEDLNMNVGSLEKFCKEAARSFFAEWGLISHQINSYNEFIG 62
Query: 2507 NGIQELFNSLGEVVVEPGYNPSKGGGGEWRHATITYGKISLDKPSFWAERNDQDEECLRL 2328
+GIQ+LF+SLGEV VEPGY+PSK G EWRHAT+++GK+ L+KPSFW+ R+D EE L+L
Sbjct: 63 HGIQDLFDSLGEVNVEPGYDPSKKRGAEWRHATVSFGKVRLEKPSFWSGRDDLPEENLKL 122
Query: 2327 LPKHARQQNMTYSSKLKVEVRVQVYILEKSDKAKTGKDPFICKRVLSDDKKEIVIGSMPV 2148
LP+HAR QNMTYSS+LKVEVRVQVY EKSDKAKTGKD +I K V+SD KKEI IG +PV
Sbjct: 123 LPRHARLQNMTYSSQLKVEVRVQVYTQEKSDKAKTGKDAYIHKNVVSDKKKEIAIGRIPV 182
Query: 2147 MVKSKQCWLDTLDKSDCLYDSGGYFIVKGAEKTFIAQEQRCLTRIWTTDKPTWTASHISE 1968
M++SK CWL TLDKSDCL+DSGGYF++KG EKTFIAQEQR L R+W TDKP+WT S++SE
Sbjct: 183 MIRSKLCWLHTLDKSDCLFDSGGYFLIKGMEKTFIAQEQRHLARVWVTDKPSWTVSYLSE 242
Query: 1967 MKNRRVYVKLIDASKAEGLNGGKVISLYFLYATMPIWIMFFSLGAASDKEVFQMIDLDVC 1788
MK +R+Y+KL++A KAEG +GGKV++ +FLYAT+P+WIMFF+LGA+SDKEVF+MIDL
Sbjct: 243 MKRKRIYIKLVEAPKAEGFSGGKVVNFFFLYATIPVWIMFFALGASSDKEVFEMIDLGES 302
Query: 1787 DTSLTNIILATIRDADEQCNGFREEG-----------KSRDYVNSLIKSAKFPPSESFDE 1641
L NIILAT+++ADE FRE+ K++DYVNS +K +KFPPSESFDE
Sbjct: 303 SADLINIILATVKNADEHYKKFREDADEHDKNFRRVDKAQDYVNSQVKVSKFPPSESFDE 362
Query: 1640 YISKYLFPTISGHREKALFLGYIVKCLLLSYSGKRKCDYKDDFRNKRLDLVGELLARELR 1461
Y+ K+LFP ISGHR+KALFLGY+VKCLLL+ GKRKCD KDDFRNKRLDL GELLARELR
Sbjct: 363 YVDKFLFPNISGHRQKALFLGYMVKCLLLACFGKRKCDNKDDFRNKRLDLAGELLARELR 422
Query: 1460 AHIRHAEKSMVKSMQRDLYGDRDLQLIERYWDASIITNGLNRAFSTGQWCHPYRRTERCS 1281
AHIRHAE+ MVK+MQRDLYGDRDLQLIERY DASIITNGLNRAFSTG WCHPY+RTERCS
Sbjct: 423 AHIRHAERRMVKAMQRDLYGDRDLQLIERYLDASIITNGLNRAFSTGAWCHPYKRTERCS 482
Query: 1280 GVVANLRRTNPLQMISDLRKSRQQVAYAGKAGDARYPNPSYWGKVCFLSTTDGENCGLVK 1101
G+VA LRRTNPLQM+SDLRK+RQQVAYAGKAGDARYPNPSYWGK+CFLST DGENCGLVK
Sbjct: 483 GIVATLRRTNPLQMMSDLRKTRQQVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVK 542
Query: 1100 NLSITALVSSKITEPILDKLVSCGMEKLDQISVSSLSKMDKVFLNGDWIGVCLDSKSFVI 921
NL++TALVS K+TEPILDKL+SCGMEKLD+IS+SS+S MDKVF+NGDW+GVC DS SFV
Sbjct: 543 NLAVTALVSLKVTEPILDKLISCGMEKLDEISLSSISNMDKVFMNGDWVGVCADSTSFVA 602
Query: 920 RFKHMRRARLIDYQVEIKLDKHQREVRIFSDAGRLLRPLLVVENLKKVRNLKSGVSSFQS 741
+ + MRRARLI QVEIK DKHQREVRIFSDAGR+LRPLL+VENLKK LK GV SFQ
Sbjct: 603 KLRCMRRARLIHPQVEIKRDKHQREVRIFSDAGRILRPLLIVENLKKTSKLKGGVCSFQY 662
Query: 740 LVNXXXXXXXXXXXXXXXITAWGIRYLLRQDSEMPA--YTHCEFDPSFLMGLSCGIIPFA 567
L++ TAWGIR+L D PA Y+HCE D SFL+GLSCGIIPFA
Sbjct: 663 LMDEGIIELIGVEEEEDCHTAWGIRHLFMGDEGGPAPKYSHCELDVSFLLGLSCGIIPFA 722
Query: 566 NHNFARRVLFQAEKHSQQAVGFSTTNPNIRVDTLMHQMYYPQRPLFKTMIADCLGRRDYS 387
NHNFARRVL+QAEKHSQQA+GFSTTNPNIRVDTL HQ+YYPQ+PLF+T+IADCLGR DYS
Sbjct: 723 NHNFARRVLYQAEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQKPLFRTVIADCLGRADYS 782
Query: 386 LGLNDGLSRPELFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHFRSYXXXXXX 207
L D + RPE FNGQNAIVAVNVH GYNQEDSLVMNRASLERGMFRTEHFRSY
Sbjct: 783 LRRKDSMPRPEYFNGQNAIVAVNVHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEVEN 842
Query: 206 XXXXXXXXXXXXXEFGKMQSKKGRVDSLDDDGFPYIGASLQTGDIVIGKVAESGEDHSTK 27
+FGKMQSKKGRVDSLDDDGFPYIGASLQ+GDIVIGKVAESGEDH K
Sbjct: 843 KELTKRFKLRDKVDFGKMQSKKGRVDSLDDDGFPYIGASLQSGDIVIGKVAESGEDHGIK 902
Query: 26 LKHTEKGM 3
LKHTEKGM
Sbjct: 903 LKHTEKGM 910
>ref|XP_010937061.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Elaeis guineensis]
Length = 1189
Score = 1330 bits (3441), Expect = 0.0
Identities = 650/910 (71%), Positives = 753/910 (82%), Gaps = 16/910 (1%)
Frame = -1
Query: 2684 METDENND---PMNLAPPDFKMKYLDMNVETLERFCKDASRSFFNEYGLIHHQITSYNQF 2514
ME +++ D PMN+ P+ + LDMNV +LE+FCK+A+RSFF E+GLI HQI SYN+F
Sbjct: 1 MEVEQSPDGPEPMNVDSPNNGTEDLDMNVGSLEKFCKEAARSFFAEWGLISHQINSYNEF 60
Query: 2513 ITNGIQELFNSLGEVVVEPGYNPSKGGGGEWRHATITYGKISLDKPSFWAERNDQDEECL 2334
I +GIQ+LF+SLGEV VEPGY+PSK G EWRHAT+++GK+ L+KPSFW+ R+D EE L
Sbjct: 61 IEHGIQDLFDSLGEVNVEPGYDPSKKRGAEWRHATVSFGKVRLEKPSFWSGRDDLPEENL 120
Query: 2333 RLLPKHARQQNMTYSSKLKVEVRVQVYILEKSDKAKTGKDPFICKRVLSDDKKEIVIGSM 2154
+LLP+HAR QNMTYSS++KVEVRV VY EKSDKAKTGKD +I K V+SD KKEI IG +
Sbjct: 121 KLLPRHARLQNMTYSSQMKVEVRVLVYTQEKSDKAKTGKDAYIVKNVVSDKKKEIAIGRI 180
Query: 2153 PVMVKSKQCWLDTLDKSDCLYDSGGYFIVKGAEKTFIAQEQRCLTRIWTTDKPTWTASHI 1974
PVM++SK CWL TLDKSDCL+DSGGYF++KG EKTFIAQEQR L R+W TDKP+W S++
Sbjct: 181 PVMIRSKLCWLHTLDKSDCLFDSGGYFLIKGMEKTFIAQEQRHLARVWVTDKPSWAVSYL 240
Query: 1973 SEMKNRRVYVKLIDASKAEGLNGGKVISLYFLYATMPIWIMFFSLGAASDKEVFQMIDLD 1794
SE+K +R+Y+KL++A KAEG +GGKV++ +FLYAT+P+WIMFF+LGA+SDKEVF+MIDL
Sbjct: 241 SEIKRKRIYIKLVEAPKAEGFSGGKVVNFFFLYATIPVWIMFFALGASSDKEVFEMIDLG 300
Query: 1793 VCDTSLTNIILATIRDADEQCNGFREEG-----------KSRDYVNSLIKSAKFPPSESF 1647
L NIILAT+++ADE FRE+ K++DYVN +K +KFPPSESF
Sbjct: 301 ESSADLINIILATVKNADEHYKKFREDADEHDKNFRRIDKAQDYVNGQVKVSKFPPSESF 360
Query: 1646 DEYISKYLFPTISGHREKALFLGYIVKCLLLSYSGKRKCDYKDDFRNKRLDLVGELLARE 1467
DEY+ K+LFP I GHR+KALFLGY+VKCLLL+ GKRKCD KDDFRNKRLDL GELLARE
Sbjct: 361 DEYVDKFLFPNIYGHRQKALFLGYMVKCLLLACFGKRKCDNKDDFRNKRLDLAGELLARE 420
Query: 1466 LRAHIRHAEKSMVKSMQRDLYGDRDLQLIERYWDASIITNGLNRAFSTGQWCHPYRRTER 1287
LRAHIRHAE+ MVK+MQRDLYGDRDLQLIERY DASIITNGLNRAFSTG WCHPY+RTER
Sbjct: 421 LRAHIRHAERRMVKAMQRDLYGDRDLQLIERYLDASIITNGLNRAFSTGAWCHPYKRTER 480
Query: 1286 CSGVVANLRRTNPLQMISDLRKSRQQVAYAGKAGDARYPNPSYWGKVCFLSTTDGENCGL 1107
CSG+VA LRRTNPLQM+SDLRK+RQQVAYAGKAGDARYPNPSYWGK+CFLST DGENCGL
Sbjct: 481 CSGIVATLRRTNPLQMMSDLRKTRQQVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGL 540
Query: 1106 VKNLSITALVSSKITEPILDKLVSCGMEKLDQISVSSLSKMDKVFLNGDWIGVCLDSKSF 927
VKNL++TALVS K+TEPILDKL+SCGMEKLD+IS++S+S MDKVFLNGDW+GVC DS SF
Sbjct: 541 VKNLAVTALVSLKVTEPILDKLISCGMEKLDEISLTSVSSMDKVFLNGDWVGVCADSSSF 600
Query: 926 VIRFKHMRRARLIDYQVEIKLDKHQREVRIFSDAGRLLRPLLVVENLKKVRNLKSGVSSF 747
V R + MRRA LI QVEIK DKHQREVRIFSDAGR+LRPLL+VENL+K+ LK GV SF
Sbjct: 601 VARLRCMRRATLIHSQVEIKRDKHQREVRIFSDAGRILRPLLIVENLEKISKLKGGVCSF 660
Query: 746 QSLVNXXXXXXXXXXXXXXXITAWGIRYLLRQDSEMPA--YTHCEFDPSFLMGLSCGIIP 573
Q L++ TAWGIR+L D PA YTHCE D SFL+GLSCGIIP
Sbjct: 661 QHLMDQGIIELIGVEEEEDCPTAWGIRHLFMGDEGQPAPKYTHCELDVSFLLGLSCGIIP 720
Query: 572 FANHNFARRVLFQAEKHSQQAVGFSTTNPNIRVDTLMHQMYYPQRPLFKTMIADCLGRRD 393
FANHNFARRVL+QAEKHSQQA+GFSTTNPNIRVDTL HQ+YYPQ+PLF+T+IADCLGR
Sbjct: 721 FANHNFARRVLYQAEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQKPLFRTVIADCLGRAV 780
Query: 392 YSLGLNDGLSRPELFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHFRSYXXXX 213
+SLG D + RPE FNGQNAIVAVNVH GYNQEDSLVMNRASLERGMFRTEHFRSY
Sbjct: 781 HSLGRKDSMPRPEYFNGQNAIVAVNVHQGYNQEDSLVMNRASLERGMFRTEHFRSYKAEV 840
Query: 212 XXXXXXXXXXXXXXXEFGKMQSKKGRVDSLDDDGFPYIGASLQTGDIVIGKVAESGEDHS 33
+FGKMQSKKG+VDSLDDDGFPYIGASLQ+GDIVIGKVAESGEDH
Sbjct: 841 ENKELTKRFKLRDKVDFGKMQSKKGKVDSLDDDGFPYIGASLQSGDIVIGKVAESGEDHG 900
Query: 32 TKLKHTEKGM 3
KLKHTEKGM
Sbjct: 901 IKLKHTEKGM 910
>ref|XP_009413518.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Musa
acuminata subsp. malaccensis]
gi|695051016|ref|XP_009413519.1| PREDICTED: DNA-directed
RNA polymerases IV and V subunit 2-like [Musa acuminata
subsp. malaccensis]
Length = 1198
Score = 1305 bits (3377), Expect = 0.0
Identities = 631/874 (72%), Positives = 735/874 (84%), Gaps = 2/874 (0%)
Frame = -1
Query: 2618 DMNVETLERFCKDASRSFFNEYGLIHHQITSYNQFITNGIQELFNSLGEVVVEPGYNPSK 2439
D+N+ LE+FCK+A+R+FF E+GLI+HQI+SYN F+ +GIQ+LF++LG+VVVEPGY+PSK
Sbjct: 46 DLNIGNLEKFCKEAARAFFKEWGLINHQISSYNDFVEHGIQDLFDTLGDVVVEPGYDPSK 105
Query: 2438 GGGGEWRHATITYGKISLDKPSFWAERNDQDEECLRLLPKHARQQNMTYSSKLKVEVRVQ 2259
G G WRHA+IT+GK+ L+KP FW E+ND +E L+LLP+HAR QNMTYSS++KV+VRVQ
Sbjct: 106 KGDGAWRHASITFGKVRLEKPEFWPEKNDIEEGSLKLLPRHARLQNMTYSSQMKVKVRVQ 165
Query: 2258 VYILEKSDKAKTGKDPFICKRVLSDDKKEIVIGSMPVMVKSKQCWLDTLDKSDCLYDSGG 2079
VY+ EKSDKAK G +I KRV +DD+ EI IG +PVMV+S CWL L KSDCL+DSGG
Sbjct: 166 VYVQEKSDKAKIGNSSYIQKRVQNDDEGEITIGRLPVMVQSNLCWLSALGKSDCLFDSGG 225
Query: 2078 YFIVKGAEKTFIAQEQRCLTRIWTTDKPTWTASHISEMKNRRVYVKLIDASKAEGLNGGK 1899
YF++KG EKTFI QEQRCLTR+W DKP T S++SE+K +R+YVKL++A KAEG +GGK
Sbjct: 226 YFLIKGMEKTFIGQEQRCLTRLWVIDKPVATVSYLSEIKRKRIYVKLVEAPKAEGFHGGK 285
Query: 1898 VISLYFLYATMPIWIMFFSLGAASDKEVFQMIDLDVCDTSLTNIILATIRDADEQCNGFR 1719
VIS+YFLYATMPIWIMFF+LGA+SDKEV +MIDL CD + NIILATI+DADEQ GFR
Sbjct: 286 VISVYFLYATMPIWIMFFALGASSDKEVLEMIDLKDCDAGMINIILATIKDADEQFEGFR 345
Query: 1718 EEGKSRDYVNSLIKSAKFPPSESFDEYISKYLFPTISGHREKALFLGYIVKCLLLSYSGK 1539
K+R++VN+LIK+AKFPPSESFDEY++KYLFP I GHR KA FLGY+VKCLLLS GK
Sbjct: 346 SLDKAREHVNALIKNAKFPPSESFDEYVAKYLFPNIIGHRTKAHFLGYMVKCLLLSSFGK 405
Query: 1538 RKCDYKDDFRNKRLDLVGELLARELRAHIRHAEKSMVKSMQRDLYGDRDLQLIERYWDAS 1359
RKCD KDDFRNKRLDL GELLARELRAHIRHAEK MV++MQRDL GDRDLQ IERY DAS
Sbjct: 406 RKCDNKDDFRNKRLDLAGELLARELRAHIRHAEKRMVRAMQRDLSGDRDLQPIERYLDAS 465
Query: 1358 IITNGLNRAFSTGQWCHPYRRTERCSGVVANLRRTNPLQMISDLRKSRQQVAYAGKAGDA 1179
IITNGLNRAFSTG W HPY++TER SG+VA LRRTNPLQM+SD+RK+RQQVAYAGKAGDA
Sbjct: 466 IITNGLNRAFSTGAWTHPYKKTERLSGIVATLRRTNPLQMMSDMRKTRQQVAYAGKAGDA 525
Query: 1178 RYPNPSYWGKVCFLSTTDGENCGLVKNLSITALVSSKITEPILDKLVSCGMEKLDQISVS 999
RYPNPSYWGK+CFLST DGENCGLVKNL++TA+VSSKI EPILDKL++CGMEKLD+IS+S
Sbjct: 526 RYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAVVSSKIMEPILDKLIACGMEKLDEISLS 585
Query: 998 SLSKMDKVFLNGDWIGVCLDSKSFVIRFKHMRRARLIDYQVEIKLDKHQREVRIFSDAGR 819
SLS+M KVFLNGDW+GVC D SF R + MRRA+LI QVEIK DKHQ+EVRIF+DAGR
Sbjct: 586 SLSQMHKVFLNGDWVGVCPDMSSFADRLRSMRRAKLIHPQVEIKRDKHQKEVRIFTDAGR 645
Query: 818 LLRPLLVVENLKKVRNLKSGVSSFQSLVNXXXXXXXXXXXXXXXITAWGIRYLL--RQDS 645
+LRPLL+VENLKK+RNLK GV SFQSL++ TAWGI+YLL +
Sbjct: 646 ILRPLLIVENLKKIRNLKGGVCSFQSLMDQEIIELIGVEEEEDCQTAWGIKYLLAVNEGI 705
Query: 644 EMPAYTHCEFDPSFLMGLSCGIIPFANHNFARRVLFQAEKHSQQAVGFSTTNPNIRVDTL 465
P Y+HCE DPSFL+GLSCGIIPFA+HNFARRVL+Q+EKHSQQA+GFSTTNP+IRVDTL
Sbjct: 706 SAPNYSHCELDPSFLLGLSCGIIPFASHNFARRVLYQSEKHSQQAIGFSTTNPSIRVDTL 765
Query: 464 MHQMYYPQRPLFKTMIADCLGRRDYSLGLNDGLSRPELFNGQNAIVAVNVHHGYNQEDSL 285
H +YYPQ PLF+T+IADCL R DYSLG D ++RPE FNGQNAIVAVNVH GYNQEDSL
Sbjct: 766 SHHLYYPQTPLFRTVIADCLVRADYSLGRKDSMTRPEYFNGQNAIVAVNVHQGYNQEDSL 825
Query: 284 VMNRASLERGMFRTEHFRSYXXXXXXXXXXXXXXXXXXXEFGKMQSKKGRVDSLDDDGFP 105
VMNR SLERGMFRTEHFRSY FGK++SKKGRVDSLDDDGFP
Sbjct: 826 VMNRTSLERGMFRTEHFRSYKADVDNKELTKRIKLKDKVAFGKIESKKGRVDSLDDDGFP 885
Query: 104 YIGASLQTGDIVIGKVAESGEDHSTKLKHTEKGM 3
YIGASLQ+GDIVIGKVAESG+DHS KLKHTEKGM
Sbjct: 886 YIGASLQSGDIVIGKVAESGDDHSIKLKHTEKGM 919
>ref|XP_012703111.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Setaria italica]
Length = 1234
Score = 1219 bits (3153), Expect = 0.0
Identities = 570/873 (65%), Positives = 715/873 (81%)
Frame = -1
Query: 2621 LDMNVETLERFCKDASRSFFNEYGLIHHQITSYNQFITNGIQELFNSLGEVVVEPGYNPS 2442
+DM+VE+LE+FCK+ASRSFF+E GLI HQI SYN+F+++G+Q+LF+SLG+V+VEPGY+PS
Sbjct: 86 IDMSVESLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQKLFDSLGDVIVEPGYDPS 145
Query: 2441 KGGGGEWRHATITYGKISLDKPSFWAERNDQDEECLRLLPKHARQQNMTYSSKLKVEVRV 2262
K G G W+HA I +G++ L+KP FW+ +++ D + P+HAR QNMTY+S++KVEV +
Sbjct: 146 KKGSGGWKHAIIKFGRVKLEKPVFWSGKDEVD---IDFKPRHARLQNMTYASRIKVEVTI 202
Query: 2261 QVYILEKSDKAKTGKDPFICKRVLSDDKKEIVIGSMPVMVKSKQCWLDTLDKSDCLYDSG 2082
+VY LEKSDK+KTG D F+ KR ++ I IG +PVMVKS C L L +SDCL+D+G
Sbjct: 203 KVYSLEKSDKSKTGNDDFVQKRDFMNETHWIYIGRLPVMVKSNLCLLHNLKESDCLFDAG 262
Query: 2081 GYFIVKGAEKTFIAQEQRCLTRIWTTDKPTWTASHISEMKNRRVYVKLIDASKAEGLNGG 1902
GYF+VKG EK FIAQEQRCL+R+W +D+P WT S +SE+K RR+Y+KL++++K++ +G
Sbjct: 263 GYFLVKGMEKVFIAQEQRCLSRLWISDRPCWTVSFMSEIKRRRIYIKLVESTKSDDFSGS 322
Query: 1901 KVISLYFLYATMPIWIMFFSLGAASDKEVFQMIDLDVCDTSLTNIILATIRDADEQCNGF 1722
K+IS+ FLYATMPIW+MFF+LG +SDKEVF +ID+ D S+ N I ATI+++DE C GF
Sbjct: 323 KIISISFLYATMPIWLMFFALGISSDKEVFDVIDMQDGDASVINTISATIKESDELCEGF 382
Query: 1721 REEGKSRDYVNSLIKSAKFPPSESFDEYISKYLFPTISGHREKALFLGYIVKCLLLSYSG 1542
R+ K+R YV+ L+K+++FPP+ESFD+Y+ ++LFP ISGHR KALFLGY+VKCLL++++G
Sbjct: 383 RKSDKARQYVDELVKNSRFPPAESFDDYVDRFLFPDISGHRNKALFLGYMVKCLLMAFTG 442
Query: 1541 KRKCDYKDDFRNKRLDLVGELLARELRAHIRHAEKSMVKSMQRDLYGDRDLQLIERYWDA 1362
KRKCD KDDFRNKRLDL GELLARELRAHIR AE+ MVK++QRDL DR+LQ +ERY DA
Sbjct: 443 KRKCDNKDDFRNKRLDLAGELLARELRAHIRLAERRMVKAIQRDLNSDRELQDLERYLDA 502
Query: 1361 SIITNGLNRAFSTGQWCHPYRRTERCSGVVANLRRTNPLQMISDLRKSRQQVAYAGKAGD 1182
SI+TNGLNRAFSTG WCHPY++TERCSG+VA LRRTNPLQMISDLRK+RQ+VAYAGKAGD
Sbjct: 503 SIVTNGLNRAFSTGSWCHPYKKTERCSGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGD 562
Query: 1181 ARYPNPSYWGKVCFLSTTDGENCGLVKNLSITALVSSKITEPILDKLVSCGMEKLDQISV 1002
ARYPNPSYWGK+CF+ST DGENCGLVKNL++TA+VSS++ +P+++ +SCGM KL++I
Sbjct: 563 ARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVEQPLIESFISCGMSKLNEIPT 622
Query: 1001 SSLSKMDKVFLNGDWIGVCLDSKSFVIRFKHMRRARLIDYQVEIKLDKHQREVRIFSDAG 822
++ +MDK+FLNG+W+G C DS SFV+R + MRR+ LI QVEIK DKHQ+EVR+FS+AG
Sbjct: 623 ENIQRMDKIFLNGNWVGCCTDSASFVLRLRCMRRSSLIHPQVEIKRDKHQKEVRVFSEAG 682
Query: 821 RLLRPLLVVENLKKVRNLKSGVSSFQSLVNXXXXXXXXXXXXXXXITAWGIRYLLRQDSE 642
R+LRPLLVVENL K+R K SFQ L+ AWGIR+L + E
Sbjct: 683 RILRPLLVVENLNKIRKPKGRSYSFQELIQQEIIEFIGVEEEEDIQCAWGIRHLFGSEGE 742
Query: 641 MPAYTHCEFDPSFLMGLSCGIIPFANHNFARRVLFQAEKHSQQAVGFSTTNPNIRVDTLM 462
+ +YTHCE DPSFL+GLSCGIIPFANHNFARRVL+Q+EKHSQQA+G+STTNP+IRVDTL
Sbjct: 743 ISSYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLS 802
Query: 461 HQMYYPQRPLFKTMIADCLGRRDYSLGLNDGLSRPELFNGQNAIVAVNVHHGYNQEDSLV 282
HQ+YYPQRPLFKT+IADCLGR DY++G D +RPE FNGQNAIVAVNVH G+NQEDSLV
Sbjct: 803 HQLYYPQRPLFKTVIADCLGRSDYTIGRRDDFARPEYFNGQNAIVAVNVHQGFNQEDSLV 862
Query: 281 MNRASLERGMFRTEHFRSYXXXXXXXXXXXXXXXXXXXEFGKMQSKKGRVDSLDDDGFPY 102
MNRASLERGMFRTEH RSY +FGKM+SK+GRVD+LDDDG PY
Sbjct: 863 MNRASLERGMFRTEHLRSYKADVENKDVTKRLKMKEKIDFGKMESKRGRVDNLDDDGLPY 922
Query: 101 IGASLQTGDIVIGKVAESGEDHSTKLKHTEKGM 3
IGASLQT DIVIGKV+ESGEDHS KLKHTEKGM
Sbjct: 923 IGASLQTNDIVIGKVSESGEDHSIKLKHTEKGM 955
>ref|XP_003577435.2| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
isoform X2 [Brachypodium distachyon]
Length = 1192
Score = 1214 bits (3140), Expect = 0.0
Identities = 582/875 (66%), Positives = 698/875 (79%), Gaps = 3/875 (0%)
Frame = -1
Query: 2618 DMNVETLERFCKDASRSFFNEYGLIHHQITSYNQFITNGIQELFNSLGEVVVEPGYNPSK 2439
DMN+ +LE+FCK+ASRSFF E GLI HQI SYN+FI++G+QELF+SLGEV VEPGY+PSK
Sbjct: 39 DMNLTSLEKFCKEASRSFFEEIGLISHQINSYNEFISHGLQELFDSLGEVTVEPGYDPSK 98
Query: 2438 GGGGEWRHATITYGKISLDKPSFWAERNDQDEECLRLLPKHARQQNMTYSSKLKVEVRVQ 2259
G G WRHA I +GK+ L++P FW+ + D DEE L+L P+HAR QNMTYSSK++VEV +Q
Sbjct: 99 KGPGGWRHAIIKFGKVKLEEPVFWSGKIDIDEESLKLKPRHARLQNMTYSSKMEVEVNIQ 158
Query: 2258 VYILEKSDKAKTGKDPFICKRVLSDDKKEIVIGSMPVMVKSKQCWLDTLDKSDCLYDSGG 2079
VY +EKSDKAKTG D F KR + ++ + IG +PVMV S CWL L +SDCL+DSGG
Sbjct: 159 VYSMEKSDKAKTGNDHFGHKRDIINETHWVTIGRLPVMVNSDLCWLHKLGESDCLFDSGG 218
Query: 2078 YFIVKGAEKTFIAQEQRCLTRIWTTDKPTWTASHISEMKNRRVYVKLIDASKAEGLNGGK 1899
YF++KG EK FIAQEQRCLTRIW D+P W S++SEMK RRVY+KLID++ LNG K
Sbjct: 219 YFLIKGMEKIFIAQEQRCLTRIWVADQPCWNVSYLSEMKRRRVYIKLIDSTTNNDLNGAK 278
Query: 1898 VISLYFLYATMPIWIMFFSLGAASDKEVFQMIDLDVCDTSLTNIILATIRDADEQCNGFR 1719
+IS+ FLYA MPIW++FF+LG +SDKEVF MID+ CD S+ N I ATIR++DE C GFR
Sbjct: 279 IISISFLYANMPIWLLFFALGVSSDKEVFDMIDMKDCDASVINAIYATIRESDELCEGFR 338
Query: 1718 EEGKSRDYVNSLIKSAKFPPSESFDEYISKYLFPTISGHREKALFLGYIVKCLLLSYSGK 1539
+ K+R YV+ L+KS+KFPP+E F +Y++KYLFP ISG+R K+ FLGY+VKCLL++++GK
Sbjct: 339 QSDKARKYVDDLVKSSKFPPAEPFTDYVAKYLFPGISGNRNKSFFLGYMVKCLLMAFTGK 398
Query: 1538 RKCDYKDDFRNKRLDLVGELLARELRAHIRHAEKSMVKSMQRDLYGDRDLQLIERYWDAS 1359
RKCD KDDFRNKRL+L G+LL RELRAH+RHAE+ MVK+MQRDL DRDLQ RY DAS
Sbjct: 399 RKCDNKDDFRNKRLELPGQLLGRELRAHLRHAERLMVKAMQRDLNSDRDLQFPLRYLDAS 458
Query: 1358 IITNGLNRAFSTGQWCHPYRRTERCSGVVANLRRTNPLQMISDLRKSRQQVAYAGKAGDA 1179
IITNG+NRAF+TG W HPY R ERCSG+VA LRRTNPLQM+SDLRKSRQQVAYAGK GDA
Sbjct: 459 IITNGINRAFATGSWSHPYIRNERCSGIVATLRRTNPLQMMSDLRKSRQQVAYAGKVGDA 518
Query: 1178 RYPNPSYWGKVCFLSTTDGENCGLVKNLSITALVSSKITEPILDKLVSCGMEKLDQISVS 999
RYPNPSYWGK+CF+ST DGENCGLVKNL++TA+VSS++ +P++D+ VSCGM KLD+IS
Sbjct: 519 RYPNPSYWGKMCFMSTPDGENCGLVKNLAVTAIVSSRVVQPLIDRFVSCGMNKLDEISAK 578
Query: 998 SLSKMDKVFLNGDWIGVCLDSKSFVIRFKHMRRARLIDYQVEIKLDKHQ--REVRIFSDA 825
+ KMDK+FLNGDWIG C D SFV+R + MRRA LID QVEIK DKHQ EVR+FSDA
Sbjct: 579 EIPKMDKIFLNGDWIGSCTDPASFVMRLRCMRRANLIDPQVEIKRDKHQFPGEVRVFSDA 638
Query: 824 GRLLRPLLVVENLKKVRNLKSGVSSFQSLVNXXXXXXXXXXXXXXXITAWGIRYLLRQDS 645
GR+LRPLLVVENL K+R K +FQ+L+ AWGIR+L
Sbjct: 639 GRILRPLLVVENLNKIRKSKDRPYTFQALLQQEIIEYIGVEEEEDIQCAWGIRHLFPSSG 698
Query: 644 E-MPAYTHCEFDPSFLMGLSCGIIPFANHNFARRVLFQAEKHSQQAVGFSTTNPNIRVDT 468
E + YTHCE D SFL+GLSCG+IPFANHNFARRVL+Q+EKHSQQA+G+STTNP RVDT
Sbjct: 699 EKVSGYTHCELDLSFLLGLSCGLIPFANHNFARRVLYQSEKHSQQAIGYSTTNPLTRVDT 758
Query: 467 LMHQMYYPQRPLFKTMIADCLGRRDYSLGLNDGLSRPELFNGQNAIVAVNVHHGYNQEDS 288
HQ+YYPQRPLFKT+ ADC+GR DY++G D +RPE FNGQNAIVAVNVH G+NQEDS
Sbjct: 759 HSHQLYYPQRPLFKTVTADCIGRSDYTIGRKDDFARPEYFNGQNAIVAVNVHQGFNQEDS 818
Query: 287 LVMNRASLERGMFRTEHFRSYXXXXXXXXXXXXXXXXXXXEFGKMQSKKGRVDSLDDDGF 108
LVMNRASLERGMFRTEH RSY +FGKMQSK+GRVD+LDDDG
Sbjct: 819 LVMNRASLERGMFRTEHIRSYKAEVETKEPTKRLKLKEKVDFGKMQSKRGRVDNLDDDGL 878
Query: 107 PYIGASLQTGDIVIGKVAESGEDHSTKLKHTEKGM 3
PY+GASLQ+GDIVIGKV+ESGEDHS K+KHTEKGM
Sbjct: 879 PYVGASLQSGDIVIGKVSESGEDHSIKMKHTEKGM 913
>ref|XP_010237620.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
isoform X1 [Brachypodium distachyon]
Length = 1213
Score = 1214 bits (3140), Expect = 0.0
Identities = 582/875 (66%), Positives = 698/875 (79%), Gaps = 3/875 (0%)
Frame = -1
Query: 2618 DMNVETLERFCKDASRSFFNEYGLIHHQITSYNQFITNGIQELFNSLGEVVVEPGYNPSK 2439
DMN+ +LE+FCK+ASRSFF E GLI HQI SYN+FI++G+QELF+SLGEV VEPGY+PSK
Sbjct: 60 DMNLTSLEKFCKEASRSFFEEIGLISHQINSYNEFISHGLQELFDSLGEVTVEPGYDPSK 119
Query: 2438 GGGGEWRHATITYGKISLDKPSFWAERNDQDEECLRLLPKHARQQNMTYSSKLKVEVRVQ 2259
G G WRHA I +GK+ L++P FW+ + D DEE L+L P+HAR QNMTYSSK++VEV +Q
Sbjct: 120 KGPGGWRHAIIKFGKVKLEEPVFWSGKIDIDEESLKLKPRHARLQNMTYSSKMEVEVNIQ 179
Query: 2258 VYILEKSDKAKTGKDPFICKRVLSDDKKEIVIGSMPVMVKSKQCWLDTLDKSDCLYDSGG 2079
VY +EKSDKAKTG D F KR + ++ + IG +PVMV S CWL L +SDCL+DSGG
Sbjct: 180 VYSMEKSDKAKTGNDHFGHKRDIINETHWVTIGRLPVMVNSDLCWLHKLGESDCLFDSGG 239
Query: 2078 YFIVKGAEKTFIAQEQRCLTRIWTTDKPTWTASHISEMKNRRVYVKLIDASKAEGLNGGK 1899
YF++KG EK FIAQEQRCLTRIW D+P W S++SEMK RRVY+KLID++ LNG K
Sbjct: 240 YFLIKGMEKIFIAQEQRCLTRIWVADQPCWNVSYLSEMKRRRVYIKLIDSTTNNDLNGAK 299
Query: 1898 VISLYFLYATMPIWIMFFSLGAASDKEVFQMIDLDVCDTSLTNIILATIRDADEQCNGFR 1719
+IS+ FLYA MPIW++FF+LG +SDKEVF MID+ CD S+ N I ATIR++DE C GFR
Sbjct: 300 IISISFLYANMPIWLLFFALGVSSDKEVFDMIDMKDCDASVINAIYATIRESDELCEGFR 359
Query: 1718 EEGKSRDYVNSLIKSAKFPPSESFDEYISKYLFPTISGHREKALFLGYIVKCLLLSYSGK 1539
+ K+R YV+ L+KS+KFPP+E F +Y++KYLFP ISG+R K+ FLGY+VKCLL++++GK
Sbjct: 360 QSDKARKYVDDLVKSSKFPPAEPFTDYVAKYLFPGISGNRNKSFFLGYMVKCLLMAFTGK 419
Query: 1538 RKCDYKDDFRNKRLDLVGELLARELRAHIRHAEKSMVKSMQRDLYGDRDLQLIERYWDAS 1359
RKCD KDDFRNKRL+L G+LL RELRAH+RHAE+ MVK+MQRDL DRDLQ RY DAS
Sbjct: 420 RKCDNKDDFRNKRLELPGQLLGRELRAHLRHAERLMVKAMQRDLNSDRDLQFPLRYLDAS 479
Query: 1358 IITNGLNRAFSTGQWCHPYRRTERCSGVVANLRRTNPLQMISDLRKSRQQVAYAGKAGDA 1179
IITNG+NRAF+TG W HPY R ERCSG+VA LRRTNPLQM+SDLRKSRQQVAYAGK GDA
Sbjct: 480 IITNGINRAFATGSWSHPYIRNERCSGIVATLRRTNPLQMMSDLRKSRQQVAYAGKVGDA 539
Query: 1178 RYPNPSYWGKVCFLSTTDGENCGLVKNLSITALVSSKITEPILDKLVSCGMEKLDQISVS 999
RYPNPSYWGK+CF+ST DGENCGLVKNL++TA+VSS++ +P++D+ VSCGM KLD+IS
Sbjct: 540 RYPNPSYWGKMCFMSTPDGENCGLVKNLAVTAIVSSRVVQPLIDRFVSCGMNKLDEISAK 599
Query: 998 SLSKMDKVFLNGDWIGVCLDSKSFVIRFKHMRRARLIDYQVEIKLDKHQ--REVRIFSDA 825
+ KMDK+FLNGDWIG C D SFV+R + MRRA LID QVEIK DKHQ EVR+FSDA
Sbjct: 600 EIPKMDKIFLNGDWIGSCTDPASFVMRLRCMRRANLIDPQVEIKRDKHQFPGEVRVFSDA 659
Query: 824 GRLLRPLLVVENLKKVRNLKSGVSSFQSLVNXXXXXXXXXXXXXXXITAWGIRYLLRQDS 645
GR+LRPLLVVENL K+R K +FQ+L+ AWGIR+L
Sbjct: 660 GRILRPLLVVENLNKIRKSKDRPYTFQALLQQEIIEYIGVEEEEDIQCAWGIRHLFPSSG 719
Query: 644 E-MPAYTHCEFDPSFLMGLSCGIIPFANHNFARRVLFQAEKHSQQAVGFSTTNPNIRVDT 468
E + YTHCE D SFL+GLSCG+IPFANHNFARRVL+Q+EKHSQQA+G+STTNP RVDT
Sbjct: 720 EKVSGYTHCELDLSFLLGLSCGLIPFANHNFARRVLYQSEKHSQQAIGYSTTNPLTRVDT 779
Query: 467 LMHQMYYPQRPLFKTMIADCLGRRDYSLGLNDGLSRPELFNGQNAIVAVNVHHGYNQEDS 288
HQ+YYPQRPLFKT+ ADC+GR DY++G D +RPE FNGQNAIVAVNVH G+NQEDS
Sbjct: 780 HSHQLYYPQRPLFKTVTADCIGRSDYTIGRKDDFARPEYFNGQNAIVAVNVHQGFNQEDS 839
Query: 287 LVMNRASLERGMFRTEHFRSYXXXXXXXXXXXXXXXXXXXEFGKMQSKKGRVDSLDDDGF 108
LVMNRASLERGMFRTEH RSY +FGKMQSK+GRVD+LDDDG
Sbjct: 840 LVMNRASLERGMFRTEHIRSYKAEVETKEPTKRLKLKEKVDFGKMQSKRGRVDNLDDDGL 899
Query: 107 PYIGASLQTGDIVIGKVAESGEDHSTKLKHTEKGM 3
PY+GASLQ+GDIVIGKV+ESGEDHS K+KHTEKGM
Sbjct: 900 PYVGASLQSGDIVIGKVSESGEDHSIKMKHTEKGM 934
>ref|XP_003564776.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Brachypodium distachyon]
Length = 1213
Score = 1211 bits (3134), Expect = 0.0
Identities = 581/875 (66%), Positives = 697/875 (79%), Gaps = 3/875 (0%)
Frame = -1
Query: 2618 DMNVETLERFCKDASRSFFNEYGLIHHQITSYNQFITNGIQELFNSLGEVVVEPGYNPSK 2439
DMN+ +LE+FCK+ASRSFF E GLI HQI SYN+F+++G+QELF+SLGEV VEPGY+PSK
Sbjct: 60 DMNLTSLEKFCKEASRSFFEEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPGYDPSK 119
Query: 2438 GGGGEWRHATITYGKISLDKPSFWAERNDQDEECLRLLPKHARQQNMTYSSKLKVEVRVQ 2259
G G WRHA I +GK+ L++P FW+ + DEE L+L P+HAR QNMTYSSK++VEV +Q
Sbjct: 120 KGPGGWRHAIIKFGKVKLEEPVFWSGKIGIDEESLKLKPRHARLQNMTYSSKMEVEVNIQ 179
Query: 2258 VYILEKSDKAKTGKDPFICKRVLSDDKKEIVIGSMPVMVKSKQCWLDTLDKSDCLYDSGG 2079
VY +EKSDKAKTG D F KR + ++ + IG +PVMV S CWL L +SDCL+DSGG
Sbjct: 180 VYSMEKSDKAKTGNDHFGHKRDIINETHWVTIGRLPVMVNSDLCWLHKLGESDCLFDSGG 239
Query: 2078 YFIVKGAEKTFIAQEQRCLTRIWTTDKPTWTASHISEMKNRRVYVKLIDASKAEGLNGGK 1899
YF++KG EK FIAQEQRCLTRIW D+P W S++SEMK RRVY+KLID++ LNG K
Sbjct: 240 YFLIKGMEKIFIAQEQRCLTRIWVADRPCWNVSYLSEMKRRRVYIKLIDSTTNNDLNGAK 299
Query: 1898 VISLYFLYATMPIWIMFFSLGAASDKEVFQMIDLDVCDTSLTNIILATIRDADEQCNGFR 1719
+IS+ FLYA MPIW++FF+LG +SDKEVF MID+ CD S+ N I ATIR++DE C GFR
Sbjct: 300 IISISFLYANMPIWLLFFALGVSSDKEVFDMIDMKDCDASVINAISATIRESDELCEGFR 359
Query: 1718 EEGKSRDYVNSLIKSAKFPPSESFDEYISKYLFPTISGHREKALFLGYIVKCLLLSYSGK 1539
+ K+R YV+ L+KS+KFPP+E F +Y++KYLFP ISG+R KA FLGY+VKCLL++++GK
Sbjct: 360 QSDKARKYVDDLVKSSKFPPAEPFTDYVAKYLFPGISGNRNKAFFLGYMVKCLLMAFTGK 419
Query: 1538 RKCDYKDDFRNKRLDLVGELLARELRAHIRHAEKSMVKSMQRDLYGDRDLQLIERYWDAS 1359
RKCD KDDFRNKRL+L G+LL RELRAH+RHAE+ MVK+MQRDL DRDLQ RY DAS
Sbjct: 420 RKCDNKDDFRNKRLELPGQLLGRELRAHLRHAERLMVKAMQRDLNSDRDLQFPLRYLDAS 479
Query: 1358 IITNGLNRAFSTGQWCHPYRRTERCSGVVANLRRTNPLQMISDLRKSRQQVAYAGKAGDA 1179
IITNG+NRAF+TG W HPY R ERCSG+VA LRRTNPLQM+SDLRKSRQQVAYAGK GDA
Sbjct: 480 IITNGINRAFATGSWSHPYIRNERCSGIVATLRRTNPLQMMSDLRKSRQQVAYAGKVGDA 539
Query: 1178 RYPNPSYWGKVCFLSTTDGENCGLVKNLSITALVSSKITEPILDKLVSCGMEKLDQISVS 999
RYPNPSYWGK+CF+ST DGENCGLVKNL++TA+VSS++ +P++D+ VSCGM KLD+IS
Sbjct: 540 RYPNPSYWGKMCFMSTPDGENCGLVKNLAVTAIVSSRVVQPLIDRFVSCGMNKLDEISAK 599
Query: 998 SLSKMDKVFLNGDWIGVCLDSKSFVIRFKHMRRARLIDYQVEIKLDKHQ--REVRIFSDA 825
+ KMDK+FLNGDWIG C D SFV+R + MRRA LID QVEIK DKHQ EVR+FSDA
Sbjct: 600 EIPKMDKIFLNGDWIGSCTDPASFVMRLRCMRRANLIDPQVEIKRDKHQFPGEVRVFSDA 659
Query: 824 GRLLRPLLVVENLKKVRNLKSGVSSFQSLVNXXXXXXXXXXXXXXXITAWGIRYLLRQDS 645
GR+LRPLLVVENL K+R K +FQ+L+ AWGIR+L
Sbjct: 660 GRILRPLLVVENLNKIRKSKDRHYTFQALLQQEIIEYIGVEEEEDIQCAWGIRHLFPSSG 719
Query: 644 E-MPAYTHCEFDPSFLMGLSCGIIPFANHNFARRVLFQAEKHSQQAVGFSTTNPNIRVDT 468
E + YTHCE D SFL+GLSCG+IPFANHNFARRVL+Q+EKHSQQA+G+STTNP RVDT
Sbjct: 720 EKVSGYTHCELDLSFLLGLSCGLIPFANHNFARRVLYQSEKHSQQAIGYSTTNPLTRVDT 779
Query: 467 LMHQMYYPQRPLFKTMIADCLGRRDYSLGLNDGLSRPELFNGQNAIVAVNVHHGYNQEDS 288
HQ+YYPQRPLFKT+ ADC+GR DY++G D +RPE FNGQNAIVAVNVH G+NQEDS
Sbjct: 780 HSHQLYYPQRPLFKTVTADCIGRSDYTIGRKDDFARPEYFNGQNAIVAVNVHQGFNQEDS 839
Query: 287 LVMNRASLERGMFRTEHFRSYXXXXXXXXXXXXXXXXXXXEFGKMQSKKGRVDSLDDDGF 108
LVMNRASLERGMFRTEH RSY +FGKMQSK+GRVD+LDDDG
Sbjct: 840 LVMNRASLERGMFRTEHIRSYKAEVETKEPIKRLKLKEKVDFGKMQSKRGRVDNLDDDGL 899
Query: 107 PYIGASLQTGDIVIGKVAESGEDHSTKLKHTEKGM 3
PY+GASLQ+GDIVIGKV+ESGEDHS K+KHTEKGM
Sbjct: 900 PYVGASLQSGDIVIGKVSESGEDHSIKMKHTEKGM 934
>gb|EMS61833.1| DNA-directed RNA polymerase D subunit 2a [Triticum urartu]
Length = 1269
Score = 1211 bits (3133), Expect = 0.0
Identities = 583/906 (64%), Positives = 708/906 (78%), Gaps = 12/906 (1%)
Frame = -1
Query: 2684 METDENNDPMNLAPPDFKMKY---------LDMNVETLERFCKDASRSFFNEYGLIHHQI 2532
M+ D N P + D K KY +DM++ +LE+FCK+ASRSFF+E+GLI HQI
Sbjct: 53 MDADMNGKPSS--DGDGKGKYSSESHAEVPIDMSLGSLEKFCKEASRSFFDEFGLISHQI 110
Query: 2531 TSYNQFITNGIQELFNSLGEVVVEPGYNPSKGGGGEWRHATITYGKISLDKPSFWAERND 2352
SYN+F+++G+QELF+SLGEV VEP Y+ SK G G W+HA I +G++ L+KP FW+ R+D
Sbjct: 111 NSYNEFVSHGLQELFDSLGEVTVEPSYDLSKKGPGGWKHAVIRFGRVKLEKPVFWSGRDD 170
Query: 2351 QDEECLRLLPKHARQQNMTYSSKLKVEVRVQVYILEKSDKAKTGKDPFICKRVLSDDKKE 2172
DEE L+L P+HAR QNMTYSSK++VEV +Q+Y +EKSDK+KT KDPF KRVL D+
Sbjct: 171 VDEESLKLKPRHARLQNMTYSSKMEVEVHIQIYSMEKSDKSKTEKDPFGHKRVLMDETHV 230
Query: 2171 IVIGSMPVMVKSKQCWLDTLDKSDCLYDSGGYFIVKGAEKTFIAQEQRCLTRIWTTDKPT 1992
+ IG +PVMV S CWL L +SDCLYDSGGYF+++G EK FIAQEQRCLTRIW D+P
Sbjct: 231 VNIGRLPVMVNSNLCWLRELRESDCLYDSGGYFLIRGMEKIFIAQEQRCLTRIWIADRPV 290
Query: 1991 WTASHISEMKNRRVYVKLIDASKAEGLNGGKVISLYFLYATMPIWIMFFSLGAASDKEVF 1812
WT S++SE+K RR+YVKLID++K +G K+IS+ FLYA MPIW+MFF+LG +SDKE F
Sbjct: 291 WTVSYLSEIKRRRIYVKLIDSTKNNDFSGSKIISISFLYANMPIWLMFFALGVSSDKEAF 350
Query: 1811 QMIDLDVCDTSLTNIILATIRDADEQCNGFREEGKSRDYVNSLIKSAKFPPSESFDEYIS 1632
MID+ CD S+ N I ATI ++DE C GFR+ K+R V+ L+KS+KFPP ESFD+YI+
Sbjct: 351 DMIDMGDCDASVINAISATISESDELCEGFRKSDKARQCVDDLVKSSKFPPGESFDDYIA 410
Query: 1631 KYLFPTISGHREKALFLGYIVKCLLLSYSGKRKCDYKDDFRNKRLDLVGELLARELRAHI 1452
KYLFP I G+R KALFLGY+VKCLL++++GKR+CD KDDFRNKRL+L G+LL RELRAH+
Sbjct: 411 KYLFPGIKGNRNKALFLGYMVKCLLMAFTGKRRCDNKDDFRNKRLELPGQLLGRELRAHL 470
Query: 1451 RHAEKSMVKSMQRDLYGDRDLQLIERYWDASIITNGLNRAFSTGQWCHPYRRTERCSGVV 1272
RHAE+ MVK+MQRDL DRDL+ RY DASIITNG+NRAF+TG WCHPY+R ERCSG+V
Sbjct: 471 RHAERLMVKAMQRDLNSDRDLEFPTRYLDASIITNGINRAFATGSWCHPYKRNERCSGIV 530
Query: 1271 ANLRRTNPLQMISDLRKSRQQVAYAGKAGDARYPNPSYWGKVCFLSTTDGENCGLVKNLS 1092
A LRRTNPLQM+SDLRKSRQQVAYAGKAGDARYPNPSYWGK+CF+ST DGENCGLVKNL+
Sbjct: 531 ATLRRTNPLQMMSDLRKSRQQVAYAGKAGDARYPNPSYWGKMCFMSTPDGENCGLVKNLA 590
Query: 1091 ITALVSSKITEPILDKLVSCGMEKLDQISVSSLSKMDKVFLNGDWIGVCLDSKSFVIRFK 912
+TA+VSS++ +P++D+ VSCGM KLD+I + KMDK+FLNGDW+G C D SFV+R +
Sbjct: 591 VTAIVSSRVAQPLIDRFVSCGMNKLDEIPAKQIPKMDKIFLNGDWVGSCADPASFVMRLR 650
Query: 911 HMRRARLIDYQVEIKLDKHQR--EVRIFSDAGRLLRPLLVVENLKKVRNLKSGVSSFQSL 738
MRR LID QVEIK DKHQ EVR+FSDAGRLLRPLLVVENL K+ K SFQ+L
Sbjct: 651 CMRRGGLIDPQVEIKRDKHQSPGEVRVFSDAGRLLRPLLVVENLNKITKRKGSPYSFQAL 710
Query: 737 VNXXXXXXXXXXXXXXXITAWGIRYLLRQD-SEMPAYTHCEFDPSFLMGLSCGIIPFANH 561
+ AWGIR+L + E+ YTHCE D SFL+GLSC +IPFANH
Sbjct: 711 MQQEIIEFIGVEEEEDIQCAWGIRHLFQSSGDEVSGYTHCELDLSFLLGLSCSLIPFANH 770
Query: 560 NFARRVLFQAEKHSQQAVGFSTTNPNIRVDTLMHQMYYPQRPLFKTMIADCLGRRDYSLG 381
NFARRVL+QAEKHSQQA+G+STTNP RVDTL HQ+YYPQRPLFKT+ ADC+GR DY+ G
Sbjct: 771 NFARRVLYQAEKHSQQAIGYSTTNPLTRVDTLSHQLYYPQRPLFKTVSADCIGRSDYTFG 830
Query: 380 LNDGLSRPELFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHFRSYXXXXXXXX 201
D +RPE FNGQNAIVAVN+H G+NQEDSLVMNRASLERGMFRTE RSY
Sbjct: 831 RKDDFARPEYFNGQNAIVAVNIHQGFNQEDSLVMNRASLERGMFRTELMRSYKAEVETKG 890
Query: 200 XXXXXXXXXXXEFGKMQSKKGRVDSLDDDGFPYIGASLQTGDIVIGKVAESGEDHSTKLK 21
FGKM+SK+GRVD+LDDDG P++G+SLQ GDI+IGKV+ESGEDHS KLK
Sbjct: 891 PSKRLKMKEKVNFGKMESKRGRVDNLDDDGLPFVGSSLQIGDIIIGKVSESGEDHSIKLK 950
Query: 20 HTEKGM 3
HTEKGM
Sbjct: 951 HTEKGM 956
>ref|NP_001054041.1| Os04g0641000, partial [Oryza sativa Japonica Group]
gi|113565612|dbj|BAF15955.1| Os04g0641000, partial [Oryza
sativa Japonica Group]
Length = 1270
Score = 1196 bits (3095), Expect = 0.0
Identities = 572/898 (63%), Positives = 701/898 (78%), Gaps = 25/898 (2%)
Frame = -1
Query: 2621 LDMNVETLERFCKDASRSFFNEYGLIHHQITSYNQFITNGIQELFNSLGEVVVEPGYNPS 2442
+DM++ +LE+FCK+ASRSFF+E GLI HQI SYN+F+++G+QELF+SLGEV VEP Y+PS
Sbjct: 94 VDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPS 153
Query: 2441 KGGGGEWRHATITYGKISLDKPSFWAERNDQDEECLRLLPKHARQQNMTYSSKLKVEVRV 2262
G G WRHA I +G++ L++P FW+ D DE+ L+L P+HAR QNMTYSSK+KVEV
Sbjct: 154 NRGPGGWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHF 213
Query: 2261 QVYILEKSDKAKTGKDPFICKRVLSDDKKEIVIGSMPVMVKSKQCWLDTLDKSDCLYDSG 2082
QVY +EKSDKAKTG D F KR + ++ I IG +PVMV S CWL L +SDC +DSG
Sbjct: 214 QVYSMEKSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSG 273
Query: 2081 GYFIVKGAEKTFIAQEQRCLTRIWTTDKPTWTASHISEMKNRRVYVKLIDASKAEGLNGG 1902
GYF++KG EK FIAQEQ+CLTRIW D+P W S +S ++ RR+Y+KLID++ E +GG
Sbjct: 274 GYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASGG 333
Query: 1901 KVISLYFLYATMPIWIMFFSLGAASDKEVFQMIDLDVCDTSLTNIILATIRDADEQCNGF 1722
K+IS+ FLYA MPIW+MFF+LG +SDK++F +I+++ CD + N I ATI+++DE C GF
Sbjct: 334 KIISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEGF 393
Query: 1721 REEGKSRDYVNSLIKSAKFPPSESFDEYISKYLFPTISGHREKALFLGYIVKCLLLSYSG 1542
R+ K+R YV+ LIK++KFPP+E FD+YI+KYLFP+ISG+R KALFLGY+VKCLL++++G
Sbjct: 394 RKSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTG 453
Query: 1541 KRKCDYKDDFRNKRLDLVGELLARELRAHIRHAEKSMVKSMQRDLYGDRDLQLIERYWDA 1362
KRKCD KDDFRNKRLDL GELL RELRAHIRHAE+ MVK++QRDL +R+LQ + Y DA
Sbjct: 454 KRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDA 513
Query: 1361 SIITNGLNRAFSTGQWCHPYRRTERCSGVVANLRRTNPLQMISDLRKSRQQVAYAGKAGD 1182
SIITNGLNRAFSTG WCHPY+R ERC+G+VA LRRTNPLQMISDLRK+RQ+VAYAGKAGD
Sbjct: 514 SIITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGD 573
Query: 1181 ARYPNPSYWGKVCFLSTTDGENCGLVKNLSITALVSSKITEPILDKLVSCGMEKLDQISV 1002
ARYPNPSYWGK+CF+ST DGENCGLVKNL++TA VSS++ P++D+ +SCGM KL +I
Sbjct: 574 ARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISCGMNKLHEIPT 633
Query: 1001 SSLSKMDKVFLNGDWIGVCLDSKSFVIRFKHMRRARLIDYQVEIKLDKHQREVRIFSDAG 822
+ +MDK+FLNGDW+G C D SFV+R + MRR+ LID QVEIK DKHQREVR+FSDAG
Sbjct: 634 EEVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIKRDKHQREVRVFSDAG 693
Query: 821 RLLRPLLVVENLKKVRNLKSGVSSFQSLVNXXXXXXXXXXXXXXXITAWGIRYLLRQDSE 642
R+LRPLLVVENL K+R K SFQ L+ +AWGIR L + E
Sbjct: 694 RILRPLLVVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVEEEEDIRSAWGIRNLFESEEE 753
Query: 641 MP----------------------AYTHCEFDPSFLMGLSCGIIPFANHNFARRVLFQAE 528
P YTHCE D SFL+GLSCGIIPFANHNFARRVL+Q+E
Sbjct: 754 APMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSE 813
Query: 527 KHSQQAVGFSTTNPNIRVDTLMHQMYYPQRPLFKTMIADCLGRRDYSLGLNDGLSRPELF 348
KHSQQA+G+STTNP+IRVDTL HQ+YYPQRPLFKT+IADC+GR +Y+ G D +RPE F
Sbjct: 814 KHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIGRSEYTFGRKDDFARPEYF 873
Query: 347 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHFRSY---XXXXXXXXXXXXXXXX 177
NGQNAIVAVNVH G+NQEDS+VMNRASLERGMFRTEHFR+Y
Sbjct: 874 NGQNAIVAVNVHQGFNQEDSVVMNRASLERGMFRTEHFRNYKAEVENKGGPGGNKRLKMK 933
Query: 176 XXXEFGKMQSKKGRVDSLDDDGFPYIGASLQTGDIVIGKVAESGEDHSTKLKHTEKGM 3
+FGKMQSK+GRVD+LDDDG PY+GASLQ+GDIVIGKV+ESGEDHS KLKHTEKGM
Sbjct: 934 DKIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGM 991
>emb|CAE05960.2| OSJNBa0063C18.1 [Oryza sativa Japonica Group]
Length = 1316
Score = 1196 bits (3095), Expect = 0.0
Identities = 572/898 (63%), Positives = 701/898 (78%), Gaps = 25/898 (2%)
Frame = -1
Query: 2621 LDMNVETLERFCKDASRSFFNEYGLIHHQITSYNQFITNGIQELFNSLGEVVVEPGYNPS 2442
+DM++ +LE+FCK+ASRSFF+E GLI HQI SYN+F+++G+QELF+SLGEV VEP Y+PS
Sbjct: 140 VDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPS 199
Query: 2441 KGGGGEWRHATITYGKISLDKPSFWAERNDQDEECLRLLPKHARQQNMTYSSKLKVEVRV 2262
G G WRHA I +G++ L++P FW+ D DE+ L+L P+HAR QNMTYSSK+KVEV
Sbjct: 200 NRGPGGWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHF 259
Query: 2261 QVYILEKSDKAKTGKDPFICKRVLSDDKKEIVIGSMPVMVKSKQCWLDTLDKSDCLYDSG 2082
QVY +EKSDKAKTG D F KR + ++ I IG +PVMV S CWL L +SDC +DSG
Sbjct: 260 QVYSMEKSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSG 319
Query: 2081 GYFIVKGAEKTFIAQEQRCLTRIWTTDKPTWTASHISEMKNRRVYVKLIDASKAEGLNGG 1902
GYF++KG EK FIAQEQ+CLTRIW D+P W S +S ++ RR+Y+KLID++ E +GG
Sbjct: 320 GYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASGG 379
Query: 1901 KVISLYFLYATMPIWIMFFSLGAASDKEVFQMIDLDVCDTSLTNIILATIRDADEQCNGF 1722
K+IS+ FLYA MPIW+MFF+LG +SDK++F +I+++ CD + N I ATI+++DE C GF
Sbjct: 380 KIISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEGF 439
Query: 1721 REEGKSRDYVNSLIKSAKFPPSESFDEYISKYLFPTISGHREKALFLGYIVKCLLLSYSG 1542
R+ K+R YV+ LIK++KFPP+E FD+YI+KYLFP+ISG+R KALFLGY+VKCLL++++G
Sbjct: 440 RKSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTG 499
Query: 1541 KRKCDYKDDFRNKRLDLVGELLARELRAHIRHAEKSMVKSMQRDLYGDRDLQLIERYWDA 1362
KRKCD KDDFRNKRLDL GELL RELRAHIRHAE+ MVK++QRDL +R+LQ + Y DA
Sbjct: 500 KRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDA 559
Query: 1361 SIITNGLNRAFSTGQWCHPYRRTERCSGVVANLRRTNPLQMISDLRKSRQQVAYAGKAGD 1182
SIITNGLNRAFSTG WCHPY+R ERC+G+VA LRRTNPLQMISDLRK+RQ+VAYAGKAGD
Sbjct: 560 SIITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGD 619
Query: 1181 ARYPNPSYWGKVCFLSTTDGENCGLVKNLSITALVSSKITEPILDKLVSCGMEKLDQISV 1002
ARYPNPSYWGK+CF+ST DGENCGLVKNL++TA VSS++ P++D+ +SCGM KL +I
Sbjct: 620 ARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISCGMNKLHEIPT 679
Query: 1001 SSLSKMDKVFLNGDWIGVCLDSKSFVIRFKHMRRARLIDYQVEIKLDKHQREVRIFSDAG 822
+ +MDK+FLNGDW+G C D SFV+R + MRR+ LID QVEIK DKHQREVR+FSDAG
Sbjct: 680 EEVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIKRDKHQREVRVFSDAG 739
Query: 821 RLLRPLLVVENLKKVRNLKSGVSSFQSLVNXXXXXXXXXXXXXXXITAWGIRYLLRQDSE 642
R+LRPLLVVENL K+R K SFQ L+ +AWGIR L + E
Sbjct: 740 RILRPLLVVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVEEEEDIRSAWGIRNLFESEEE 799
Query: 641 MP----------------------AYTHCEFDPSFLMGLSCGIIPFANHNFARRVLFQAE 528
P YTHCE D SFL+GLSCGIIPFANHNFARRVL+Q+E
Sbjct: 800 APMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSE 859
Query: 527 KHSQQAVGFSTTNPNIRVDTLMHQMYYPQRPLFKTMIADCLGRRDYSLGLNDGLSRPELF 348
KHSQQA+G+STTNP+IRVDTL HQ+YYPQRPLFKT+IADC+GR +Y+ G D +RPE F
Sbjct: 860 KHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIGRSEYTFGRKDDFARPEYF 919
Query: 347 NGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHFRSY---XXXXXXXXXXXXXXXX 177
NGQNAIVAVNVH G+NQEDS+VMNRASLERGMFRTEHFR+Y
Sbjct: 920 NGQNAIVAVNVHQGFNQEDSVVMNRASLERGMFRTEHFRNYKAEVENKGGPGGNKRLKMK 979
Query: 176 XXXEFGKMQSKKGRVDSLDDDGFPYIGASLQTGDIVIGKVAESGEDHSTKLKHTEKGM 3
+FGKMQSK+GRVD+LDDDG PY+GASLQ+GDIVIGKV+ESGEDHS KLKHTEKGM
Sbjct: 980 DKIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGM 1037
>gb|AFW59623.1| putative DNA-directed RNA polymerase subunit family protein [Zea
mays]
Length = 2163
Score = 1196 bits (3094), Expect = 0.0
Identities = 577/932 (61%), Positives = 719/932 (77%), Gaps = 20/932 (2%)
Frame = -1
Query: 2738 MEGDQSCKGSNHRAT---DCIMETDENNDPMNL----------------APPDFKMKYLD 2616
ME D + G +H D ++TDE M++ + F ++
Sbjct: 956 MELDDNGAGKSHSIEGNRDSPIDTDEGQPSMDVDIKGKSSLNDDVNGKSSSEPFSNPPIN 1015
Query: 2615 MNVETLERFCKDASRSFFNEYGLIHHQITSYNQFITNGIQELFNSLGEVVVEPGYNPSKG 2436
M+VE+LE+FCK+ASRSFF+E GLI HQI SYN+F+++G+QELF+SLGEV+VEPGY+PSK
Sbjct: 1016 MSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVEPGYDPSKK 1075
Query: 2435 GGGEWRHATITYGKISLDKPSFWAERNDQDEECLRLLPKHARQQNMTYSSKLKVEVRVQV 2256
G G W+HA I +G++ L+KP FW + DE + P HAR QNMTY+S+L+VEV +QV
Sbjct: 1076 GSGSWKHAIIKFGRVKLEKPVFWTGK---DEVSVDFKPWHARLQNMTYASRLRVEVTIQV 1132
Query: 2255 YILEKSDKAKTGKDPFICKRVLSDDKKEIVIGSMPVMVKSKQCWLDTLDKSDCLYDSGGY 2076
Y LEKSDK+KTG D F+ KR ++ I IG +PVMVKS C L +L +S+CL+D+GGY
Sbjct: 1133 YSLEKSDKSKTGNDGFVQKRNFMNETHWIFIGLLPVMVKSNLCLLHSLKESECLFDAGGY 1192
Query: 2075 FIVKGAEKTFIAQEQRCLTRIWTTDKPTWTASHISEMKNRRVYVKLIDASKAEGLNGGKV 1896
F+VKG EK FIAQE RCL R+W +D+P WT S +SEMK RR+Y+KL++++++E +G K+
Sbjct: 1193 FLVKGMEKVFIAQELRCLRRLWISDRPCWTISFMSEMKRRRIYIKLVESTRSEDFSGSKI 1252
Query: 1895 ISLYFLYATMPIWIMFFSLGAASDKEVFQMIDLDVCDTSLTNIILATIRDADEQCNGFRE 1716
IS+ FLYATMP+W++FF+LG +SDKE F +ID+ CD S+ N I ATI+++DE C GFR+
Sbjct: 1253 ISISFLYATMPVWLLFFALGISSDKEAFDVIDMQDCDASVINTISATIKESDELCGGFRK 1312
Query: 1715 EGKSRDYVNSLIKSAKFPPSESFDEYISKYLFPTISGHREKALFLGYIVKCLLLSYSGKR 1536
K+R YV+ L+KS+KFPP ESFD+YI+K+LFP ISG+R KALFLGY+VKCLL++++GKR
Sbjct: 1313 SDKARQYVDELVKSSKFPPVESFDDYIAKFLFPGISGNRNKALFLGYMVKCLLMAFTGKR 1372
Query: 1535 KCDYKDDFRNKRLDLVGELLARELRAHIRHAEKSMVKSMQRDLYGDRDLQLIERYWDASI 1356
KCD KDDFRNKRLDL GELL RELRAH+R AE+ MVK++QRDL DR+LQ +ERY DASI
Sbjct: 1373 KCDNKDDFRNKRLDLPGELLGRELRAHLRQAERRMVKAIQRDLNSDRELQDLERYIDASI 1432
Query: 1355 ITNGLNRAFSTGQWCHPYRRTERCSGVVANLRRTNPLQMISDLRKSRQQVAYAGKAGDAR 1176
+TNGLNRAFSTG WCHPY+R ERCSG+VA LRRTNPLQM+SDLRK+RQ+VAYAGKAGDAR
Sbjct: 1433 VTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSDLRKTRQRVAYAGKAGDAR 1492
Query: 1175 YPNPSYWGKVCFLSTTDGENCGLVKNLSITALVSSKITEPILDKLVSCGMEKLDQISVSS 996
YPNPSYWGK+CF+ST DGENCGLVKNL++T++VSSK+ +P+++ +SCGM KL+ I
Sbjct: 1493 YPNPSYWGKLCFMSTPDGENCGLVKNLAVTSIVSSKVVQPLIESFISCGMNKLNDIPTEH 1552
Query: 995 LSKMDKVFLNGDWIGVCLDSKSFVIRFKHMRRARLIDYQVEIKLDKHQREVRIFSDAGRL 816
+ +MDK+FLNG+W+G C DS SFV R + MRR+ LID QVEIK DKH +EVR+FSDAGR+
Sbjct: 1553 IQRMDKIFLNGNWLGSCSDSASFVFRLRCMRRSSLIDPQVEIKRDKHYKEVRLFSDAGRI 1612
Query: 815 LRPLLVVENLKKVRNLKSGVSSFQSLVNXXXXXXXXXXXXXXXITAWGIRYLLRQDSEMP 636
LRPLLVVENL K+R K SFQ L+ AWGIR+L + +
Sbjct: 1613 LRPLLVVENLNKIRKPKGRSFSFQELMQQEIIEFIGVEEEEDIQCAWGIRHLFESEGAIS 1672
Query: 635 AYTHCEFDPSFLMGLSCGIIPFANHNFARRVLFQAEKHSQQAVGFSTTNPNIRVDTLMHQ 456
+YTHCE DPSF++GLSCGIIPFANHNFARRVL+Q+EKHSQQA+G+ST+NP IRVDTL HQ
Sbjct: 1673 SYTHCELDPSFILGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTSNPRIRVDTLSHQ 1732
Query: 455 MYYPQRPLFKTMIADCLGRRD-YSLGLNDGLSRPELFNGQNAIVAVNVHHGYNQEDSLVM 279
+YYPQRPLFKT+IADCLGR D + G D +RPE FNGQNAIVAVNVH G+NQEDSLVM
Sbjct: 1733 LYYPQRPLFKTVIADCLGRSDCTTFGRKDDFTRPEYFNGQNAIVAVNVHQGFNQEDSLVM 1792
Query: 278 NRASLERGMFRTEHFRSYXXXXXXXXXXXXXXXXXXXEFGKMQSKKGRVDSLDDDGFPYI 99
NRASLERGMFRTEH RSY +FGK +SK+GRVD+LDDDG PYI
Sbjct: 1793 NRASLERGMFRTEHLRSYKADVENKDGTKRLKLKEKIDFGKTESKRGRVDNLDDDGLPYI 1852
Query: 98 GASLQTGDIVIGKVAESGEDHSTKLKHTEKGM 3
GASLQT DIVIGKV+ESGEDHS KLKHTEKGM
Sbjct: 1853 GASLQTNDIVIGKVSESGEDHSIKLKHTEKGM 1884
>ref|XP_002468227.1| hypothetical protein SORBIDRAFT_01g042100 [Sorghum bicolor]
gi|241922081|gb|EER95225.1| hypothetical protein
SORBIDRAFT_01g042100 [Sorghum bicolor]
Length = 1228
Score = 1196 bits (3093), Expect = 0.0
Identities = 569/890 (63%), Positives = 705/890 (79%), Gaps = 1/890 (0%)
Frame = -1
Query: 2669 NNDPMNLAPPDFKMKYLDMNVETLERFCKDASRSFFNEYGLIHHQITSYNQFITNGIQEL 2490
N+D + + +D++VE+LE+FCK+ASRSFF+E GLI HQI SYN F+++G+QEL
Sbjct: 63 NDDVNGKSSEPYSNAPIDLSVESLEKFCKEASRSFFDEVGLISHQINSYNDFVSHGLQEL 122
Query: 2489 FNSLGEVVVEPGYNPSKGGGGEWRHATITYGKISLDKPSFWAERNDQDEECLRLLPKHAR 2310
F+SLGEV+VEPGY+PSK G G W+HA I +G++ L+KP FW + DE + P HAR
Sbjct: 123 FDSLGEVIVEPGYDPSKKGSGGWKHAIIKFGRVKLEKPVFWTGK---DEGSVDFKPWHAR 179
Query: 2309 QQNMTYSSKLKVEVRVQVYILEKSDKAKTGKDPFICKRVLSDDKKEIVIGSMPVMVKSKQ 2130
QNMTY+S+L VEV +QVY LEKSDK+KTG D F+ KR ++ I IG +PVMVKS
Sbjct: 180 LQNMTYASRLIVEVNIQVYSLEKSDKSKTGNDGFVQKRDFMNETHWIFIGLLPVMVKSNL 239
Query: 2129 CWLDTLDKSDCLYDSGGYFIVKGAEKTFIAQEQRCLTRIWTTDKPTWTASHISEMKNRRV 1950
C L +L +S+CL+D+GGYF+VKG EK FIAQE RCL R+W D+P W S +SEMK RR+
Sbjct: 240 CLLHSLKESECLFDAGGYFLVKGMEKVFIAQELRCLKRLWIIDRPCWMISFMSEMKRRRI 299
Query: 1949 YVKLIDASKAEGLNGGKVISLYFLYATMPIWIMFFSLGAASDKEVFQMIDLDVCDTSLTN 1770
Y+KL++++++E +G K+IS+ FLYATMP+W++FF+LG +SDKE F +ID+ CD S+ N
Sbjct: 300 YIKLVESTRSEDFSGSKIISISFLYATMPVWLLFFALGISSDKEAFDVIDMQDCDASVIN 359
Query: 1769 IILATIRDADEQCNGFREEGKSRDYVNSLIKSAKFPPSESFDEYISKYLFPTISGHREKA 1590
I ATI+++DE C GFR+ K+R YV+ L+KS++FPP+ESFD+YI+++LFP ISG+R KA
Sbjct: 360 TISATIKESDELCEGFRKSDKARQYVDELVKSSRFPPAESFDDYIARFLFPDISGNRNKA 419
Query: 1589 LFLGYIVKCLLLSYSGKRKCDYKDDFRNKRLDLVGELLARELRAHIRHAEKSMVKSMQRD 1410
LFLGY+VKCLL++++GKRKCD KDDFRNKRLDL GELL RELRAH+R AEK MVK++QRD
Sbjct: 420 LFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAHLRLAEKRMVKAIQRD 479
Query: 1409 LYGDRDLQLIERYWDASIITNGLNRAFSTGQWCHPYRRTERCSGVVANLRRTNPLQMISD 1230
L DR+LQ +ERY DASI+TNGL+RAFSTG WCHPY+R ERCSG+VA LRRTNPLQM+SD
Sbjct: 480 LNSDRELQDLERYIDASIVTNGLSRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSD 539
Query: 1229 LRKSRQQVAYAGKAGDARYPNPSYWGKVCFLSTTDGENCGLVKNLSITALVSSKITEPIL 1050
LRK+RQ+VAYAGKAGDARYPNPSYWGK+CF+ST DGENCGLVKNL++TA+VSS++ +P++
Sbjct: 540 LRKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAIVSSRVVQPLI 599
Query: 1049 DKLVSCGMEKLDQISVSSLSKMDKVFLNGDWIGVCLDSKSFVIRFKHMRRARLIDYQVEI 870
+ +SCGM KL+ I + +MDK+FLNG+W+G C DS SFV R + MRR+ LID QVEI
Sbjct: 600 ESFISCGMSKLNDIPTEHIQRMDKIFLNGNWVGSCKDSASFVFRLRCMRRSSLIDPQVEI 659
Query: 869 KLDKHQREVRIFSDAGRLLRPLLVVENLKKVRNLKSGVSSFQSLVNXXXXXXXXXXXXXX 690
K DKH +EVR+FSDAGR+LRPLLVVENLKK+R K SFQ L+
Sbjct: 660 KRDKHHKEVRVFSDAGRILRPLLVVENLKKIRKPKGRSFSFQELMQQEIIEFIGVEEEED 719
Query: 689 XITAWGIRYLLRQDSEMPAYTHCEFDPSFLMGLSCGIIPFANHNFARRVLFQAEKHSQQA 510
AWGIR+L + + +YTHCE DPSFL+GLSCGIIPFANHNFARRVL+Q+EKHSQQA
Sbjct: 720 IQCAWGIRHLFESEGAISSYTHCELDPSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQA 779
Query: 509 VGFSTTNPNIRVDTLMHQMYYPQRPLFKTMIADCLGRRDY-SLGLNDGLSRPELFNGQNA 333
+G+STTNP+IRVDTL HQ+YYPQRPLFKT+IADCLGR DY + G D RPE FNGQNA
Sbjct: 780 IGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDYTTFGRKDDFMRPEYFNGQNA 839
Query: 332 IVAVNVHHGYNQEDSLVMNRASLERGMFRTEHFRSYXXXXXXXXXXXXXXXXXXXEFGKM 153
IVAVNVH G+NQEDSLVMNRASLERGMFRTEH RSY +FGK
Sbjct: 840 IVAVNVHQGFNQEDSLVMNRASLERGMFRTEHLRSYKADVENKDGTKRLKLKEKIDFGKT 899
Query: 152 QSKKGRVDSLDDDGFPYIGASLQTGDIVIGKVAESGEDHSTKLKHTEKGM 3
+SK+GRVD+LDDDG PYIGASLQT DIVIGKV+ESGEDHS KLKHTEKGM
Sbjct: 900 ESKRGRVDNLDDDGLPYIGASLQTNDIVIGKVSESGEDHSIKLKHTEKGM 949
>ref|XP_006652896.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Oryza brachyantha]
Length = 1250
Score = 1192 bits (3084), Expect = 0.0
Identities = 572/899 (63%), Positives = 698/899 (77%), Gaps = 26/899 (2%)
Frame = -1
Query: 2621 LDMNVETLERFCKDASRSFFNEYGLIHHQITSYNQFITNGIQELFNSLGEVVVEPGYNPS 2442
+DM++ +LE+FCK+ASRSFF+E GLI HQI SYN F+ G+QELF+SLGEV VEP Y+PS
Sbjct: 76 IDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNDFVAYGLQELFDSLGEVTVEPSYDPS 135
Query: 2441 KGGGGEWRHATITYGKISLDKPSFWAERNDQDEECLRLLPKHARQQNMTYSSKLKVEVRV 2262
G G WRHA I +G++ L++P FWA D DEE L+L P+HAR QNMTYSSK+KVEV +
Sbjct: 136 NRGPGGWRHAIIKFGRVKLEEPVFWAHGYDIDEESLKLKPRHARLQNMTYSSKMKVEVHI 195
Query: 2261 QVYILEKSDKAKTGKDPFICKRVLSDDKKEIVIGSMPVMVKSKQCWLDTLDKSDCLYDSG 2082
QVY +EKSDKAKTG D F K+ + ++ I G +PVMV S CWL L +SDC +DSG
Sbjct: 196 QVYSMEKSDKAKTGNDKFSYKKDIINETHYINFGRLPVMVMSNLCWLHKLKESDCQFDSG 255
Query: 2081 GYFIVKGAEKTFIAQEQRCLTRIWTTDKPTWTASHISEMKNRRVYVKLIDASKAEGLNGG 1902
GYF++KG EK FIAQEQ+CLTRIW ++P WT S +S ++ RR+Y+KLID++K E
Sbjct: 256 GYFLIKGMEKVFIAQEQKCLTRIWVEERPCWTVSFLSAIRRRRIYIKLIDSTKNEDR--- 312
Query: 1901 KVISLYFLYATMPIWIMFFSLGAASDKEVFQMIDLDVCDTSLTNIILATIRDADEQCNGF 1722
K+IS+ FLYA MPIW+MFF+LG SDK+VF +ID+ CD + N I ATI+++DE C GF
Sbjct: 313 KIISISFLYANMPIWLMFFALGITSDKDVFDVIDMQDCDACVINTISATIKESDELCEGF 372
Query: 1721 REEGKSRDYVNSLIKSAKFPPSESFDEYISKYLFPTISGHREKALFLGYIVKCLLLSYSG 1542
R+ ++R YV+ LIK +KFPP E FD+Y+++YLFP ISG+R KALFLGY+VKCLL++++G
Sbjct: 373 RKSDRARQYVDELIKDSKFPPGEPFDDYVARYLFPGISGNRNKALFLGYMVKCLLMAFTG 432
Query: 1541 KRKCDYKDDFRNKRLDLVGELLARELRAHIRHAEKSMVKSMQRDLYGDRDLQLIERYWDA 1362
KRKCD KDDFRNKRLDL GELL RELRAHIRHAE+ MVK++QRDL DR+LQ ++RY DA
Sbjct: 433 KRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSDRELQELDRYLDA 492
Query: 1361 SIITNGLNRAFSTGQWCHPYRRTERCSGVVANLRRTNPLQMISDLRKSRQQVAYAGKAGD 1182
SIITNGLNRAFSTG WCHPY++ ERC+G+VA LRRTNPLQMISDLRK+RQ+VAYAGKAGD
Sbjct: 493 SIITNGLNRAFSTGSWCHPYKKNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGD 552
Query: 1181 ARYPNPSYWGKVCFLSTTDGENCGLVKNLSITALVSSKITEPILDKLVSCGMEKLDQISV 1002
ARYPNPSYWGK+CF+ST DGENCGLVKNL++TA+VSS++ +P++++ +SCGM KL +I
Sbjct: 553 ARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTAVVSSRVAQPVINRFISCGMNKLHEIPT 612
Query: 1001 SSLSKMDKVFLNGDWIGVCLDSKSFVIRFKHMRRARLIDYQVEIKLDKHQREVRIFSDAG 822
+ KMDK+FLNGDW+G C D SFV+R + MRR+ LI QVEIK DKHQREVR+FSDAG
Sbjct: 613 EEVPKMDKIFLNGDWVGSCTDPASFVLRLRCMRRSGLIGPQVEIKWDKHQREVRVFSDAG 672
Query: 821 RLLRPLLVVENLKKVRNLKSGVSSFQSLVNXXXXXXXXXXXXXXXITAWGIRYLLRQDSE 642
R+LRPLLVVENL K+R K G SFQSL+ +AWGIR+L + E
Sbjct: 673 RILRPLLVVENLNKIRRPKGGSYSFQSLMQQEIIEFIGVEEEEDTKSAWGIRHLFGSEGE 732
Query: 641 MPA-----------------------YTHCEFDPSFLMGLSCGIIPFANHNFARRVLFQA 531
A YTHCE D SFL+GLSCGIIPFANHNFARRVL+Q+
Sbjct: 733 KAALVKTNRTEDAFTIRRDIEEGVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQS 792
Query: 530 EKHSQQAVGFSTTNPNIRVDTLMHQMYYPQRPLFKTMIADCLGRRDYSLGLNDGLSRPEL 351
EKHSQQA+G+STTNP+IRVDTL HQ+YYPQRPLFKT++ADC+GR +Y+ G D +RPE
Sbjct: 793 EKHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVVADCIGRSEYTFGRKDDFARPEY 852
Query: 350 FNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHFRSY---XXXXXXXXXXXXXXX 180
FNGQNAIVAVNVH G+NQEDSLVMNRASLERGMFRTEHFR+Y
Sbjct: 853 FNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHFRNYKAEVENKSAPGGNKRLKM 912
Query: 179 XXXXEFGKMQSKKGRVDSLDDDGFPYIGASLQTGDIVIGKVAESGEDHSTKLKHTEKGM 3
+FGKMQSK+GRVD+LDDDG PY+GASLQ+GDIVIGKV+ESGEDHS KLKHTEKGM
Sbjct: 913 KDKIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGM 971
>ref|XP_002447199.1| hypothetical protein SORBIDRAFT_06g030300 [Sorghum bicolor]
gi|241938382|gb|EES11527.1| hypothetical protein
SORBIDRAFT_06g030300 [Sorghum bicolor]
Length = 1239
Score = 1190 bits (3079), Expect = 0.0
Identities = 566/890 (63%), Positives = 707/890 (79%), Gaps = 1/890 (0%)
Frame = -1
Query: 2669 NNDPMNLAPPDFKMKYLDMNVETLERFCKDASRSFFNEYGLIHHQITSYNQFITNGIQEL 2490
+++P + AP +DM+VE+LE+FCK+ASRSFF+E GLI HQI SYN+F+++G+QEL
Sbjct: 81 SSEPYSNAP-------IDMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQEL 133
Query: 2489 FNSLGEVVVEPGYNPSKGGGGEWRHATITYGKISLDKPSFWAERNDQDEECLRLLPKHAR 2310
F+SLGEV+VEPGY+PSK G G W+HA I +G++ L+KP FW + DE + P HAR
Sbjct: 134 FDSLGEVIVEPGYDPSKKGSGGWKHAIIKFGRVKLEKPVFWTGK---DEGSVDFKPWHAR 190
Query: 2309 QQNMTYSSKLKVEVRVQVYILEKSDKAKTGKDPFICKRVLSDDKKEIVIGSMPVMVKSKQ 2130
QNMTY+S+LKVEV +QVY LEKSDK+KTG + F+ KR ++ I IG +PVMVKS
Sbjct: 191 LQNMTYASRLKVEVTIQVYSLEKSDKSKTGNEGFVQKRNFMNETHWIFIGLLPVMVKSNL 250
Query: 2129 CWLDTLDKSDCLYDSGGYFIVKGAEKTFIAQEQRCLTRIWTTDKPTWTASHISEMKNRRV 1950
C L +L +S+CL+D+GGYF+VKG EK FIAQEQRCL R+W +D+P W S + E+K RR+
Sbjct: 251 CLLHSLKESECLFDAGGYFLVKGMEKVFIAQEQRCLKRLWVSDRPFWMISFMHEIKRRRI 310
Query: 1949 YVKLIDASKAEGLNGGKVISLYFLYATMPIWIMFFSLGAASDKEVFQMIDLDVCDTSLTN 1770
Y+KL++++++E +G KVIS+ FLYATMP+W++FF+LG +SDKE F +ID+ CD S+ N
Sbjct: 311 YIKLVESTRSEDFSGSKVISISFLYATMPVWLLFFALGISSDKEAFDVIDMQDCDASVIN 370
Query: 1769 IILATIRDADEQCNGFREEGKSRDYVNSLIKSAKFPPSESFDEYISKYLFPTISGHREKA 1590
I ATI+++DE C GFR+ K+R YV+ L+KS++FPP+ESFD+Y++++LFP I+G+R KA
Sbjct: 371 TISATIKESDELCKGFRKSDKARQYVDELVKSSRFPPAESFDDYVARFLFPDINGNRNKA 430
Query: 1589 LFLGYIVKCLLLSYSGKRKCDYKDDFRNKRLDLVGELLARELRAHIRHAEKSMVKSMQRD 1410
FLGY+VKCLL++++GKRKCD KDDFRNKRLDL GELL RELRA +R E+ MVK++QRD
Sbjct: 431 FFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGRELRAQLRLLERRMVKAIQRD 490
Query: 1409 LYGDRDLQLIERYWDASIITNGLNRAFSTGQWCHPYRRTERCSGVVANLRRTNPLQMISD 1230
L DR+LQ +ERY DASI+TNGLNRAFSTG WCHPY+R ERCSG+VA LRRTNPLQM+SD
Sbjct: 491 LNNDRELQDLERYIDASIVTNGLNRAFSTGSWCHPYKRAERCSGIVATLRRTNPLQMMSD 550
Query: 1229 LRKSRQQVAYAGKAGDARYPNPSYWGKVCFLSTTDGENCGLVKNLSITALVSSKITEPIL 1050
LRK+RQ+VAYAGKAGDARYPNPSYWGK+CFLST DGENCGLVKNL++TA+VSS++ +P++
Sbjct: 551 LRKTRQRVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAIVSSRVGQPLI 610
Query: 1049 DKLVSCGMEKLDQISVSSLSKMDKVFLNGDWIGVCLDSKSFVIRFKHMRRARLIDYQVEI 870
+ +SCGM KL+ I + +MDK+FLNG+W+G C DS SFV R + MRR+ +ID QVEI
Sbjct: 611 ESFISCGMSKLNDIPTEHIQRMDKIFLNGNWVGSCKDSASFVFRLRCMRRSSMIDPQVEI 670
Query: 869 KLDKHQREVRIFSDAGRLLRPLLVVENLKKVRNLKSGVSSFQSLVNXXXXXXXXXXXXXX 690
K DKH +EVR+FSDAGR+LRPLLVVENL K+R K SFQ L+
Sbjct: 671 KRDKHHKEVRVFSDAGRILRPLLVVENLNKIRKPKGRSFSFQELMQQEIIEFIGVEEEED 730
Query: 689 XITAWGIRYLLRQDSEMPAYTHCEFDPSFLMGLSCGIIPFANHNFARRVLFQAEKHSQQA 510
AWGIR+L + + +YTHCE DPSFLMGLSCGIIPFANHNFARRVL+Q+EKHSQQA
Sbjct: 731 IQCAWGIRHLFESEGAISSYTHCELDPSFLMGLSCGIIPFANHNFARRVLYQSEKHSQQA 790
Query: 509 VGFSTTNPNIRVDTLMHQMYYPQRPLFKTMIADCLGRRDY-SLGLNDGLSRPELFNGQNA 333
+G+STTNP+IRVDTL HQ+YYPQRPLFKT+IADCLGR DY + G D +RPE FNGQNA
Sbjct: 791 IGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDYTAFGRKDDYTRPEYFNGQNA 850
Query: 332 IVAVNVHHGYNQEDSLVMNRASLERGMFRTEHFRSYXXXXXXXXXXXXXXXXXXXEFGKM 153
IVAVNVH G+NQEDSLVMNRASLERGMFRTEH RSY +FGK
Sbjct: 851 IVAVNVHQGFNQEDSLVMNRASLERGMFRTEHLRSYKTDVENKDGTKRLKLKEKIDFGKT 910
Query: 152 QSKKGRVDSLDDDGFPYIGASLQTGDIVIGKVAESGEDHSTKLKHTEKGM 3
+SK+GRVD+LDDDG PYIGASLQT DIVIGKV+ESGEDHS KLKHTEKGM
Sbjct: 911 ESKRGRVDNLDDDGLPYIGASLQTNDIVIGKVSESGEDHSIKLKHTEKGM 960
>gb|ADB19860.1| mutant required to maintain repression 7-3/RNA polymerase D second
largest subunit 2-3 [Zea mays]
Length = 1094
Score = 1187 bits (3072), Expect = 0.0
Identities = 569/910 (62%), Positives = 715/910 (78%), Gaps = 1/910 (0%)
Frame = -1
Query: 2729 DQSCKGSNHRATDCIMETDENNDPMNLAPPDFKMKYLDMNVETLERFCKDASRSFFNEYG 2550
D KG + + D + +++P + AP +DM+VE+LE+FCK+ASRSFF+E G
Sbjct: 53 DVDIKGKSSLSDD--VNGKSSSEPYSNAP-------IDMSVESLEKFCKEASRSFFDEVG 103
Query: 2549 LIHHQITSYNQFITNGIQELFNSLGEVVVEPGYNPSKGGGGEWRHATITYGKISLDKPSF 2370
LI HQI SYN+F+++G+QELF+SLGEV+VEPGY+PSK G G W+HA I +G++ L+KP F
Sbjct: 104 LISHQINSYNEFVSHGLQELFDSLGEVIVEPGYDPSKKGSGGWKHAIIKFGRVKLEKPVF 163
Query: 2369 WAERNDQDEECLRLLPKHARQQNMTYSSKLKVEVRVQVYILEKSDKAKTGKDPFICKRVL 2190
W + DE + P HAR QNMTY+S+L VEV +QVY LEKSDK+KTG D F+ KR
Sbjct: 164 WTGK---DEGSVDFKPWHARLQNMTYASRLIVEVTIQVYSLEKSDKSKTGNDGFVQKRNF 220
Query: 2189 SDDKKEIVIGSMPVMVKSKQCWLDTLDKSDCLYDSGGYFIVKGAEKTFIAQEQRCLTRIW 2010
++ I IG +PVMVKS C L +L++S+CL+D+GGYF+VKG EK FIAQEQRCL R+W
Sbjct: 221 MNETHWIFIGLLPVMVKSNLCLLHSLNESECLFDAGGYFLVKGMEKVFIAQEQRCLRRLW 280
Query: 2009 TTDKPTWTASHISEMKNRRVYVKLIDASKAEGLNGGKVISLYFLYATMPIWIMFFSLGAA 1830
+D+P WT S +SE+K RR+Y+KL++++++E + K+I++ FLYATMP+W++FF+LG +
Sbjct: 281 ISDRPCWTISFMSEIKRRRIYIKLVESTRSEDFSESKIITISFLYATMPVWLLFFALGIS 340
Query: 1829 SDKEVFQMIDLDVCDTSLTNIILATIRDADEQCNGFREEGKSRDYVNSLIKSAKFPPSES 1650
SDKEVF MID+ CD S+ N I ATI+++D+ C FR+ K+R YV+ L+KS++FPP+ES
Sbjct: 341 SDKEVFDMIDMQDCDASVINTISATIKESDKLCEDFRKSDKARQYVDELVKSSRFPPAES 400
Query: 1649 FDEYISKYLFPTISGHREKALFLGYIVKCLLLSYSGKRKCDYKDDFRNKRLDLVGELLAR 1470
FD+YI+++LFP ISG+R KALFLGY+VKCLL++++GKRKCD KDDFRNKRLDL GELL R
Sbjct: 401 FDDYIARFLFPDISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGR 460
Query: 1469 ELRAHIRHAEKSMVKSMQRDLYGDRDLQLIERYWDASIITNGLNRAFSTGQWCHPYRRTE 1290
ELRA +R AEK MVK++QRDL DR+LQ +ERY DASI+TNGLNRAFSTG WCHPY+R E
Sbjct: 461 ELRAQLRLAEKRMVKAIQRDLNSDRELQDLERYIDASIVTNGLNRAFSTGSWCHPYKRAE 520
Query: 1289 RCSGVVANLRRTNPLQMISDLRKSRQQVAYAGKAGDARYPNPSYWGKVCFLSTTDGENCG 1110
RCSG+VA LRRTNPLQM+SDLRK+RQ+VAYAGKAGDARYPNPSYWGK+CF+ST DGENCG
Sbjct: 521 RCSGIVATLRRTNPLQMMSDLRKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCG 580
Query: 1109 LVKNLSITALVSSKITEPILDKLVSCGMEKLDQISVSSLSKMDKVFLNGDWIGVCLDSKS 930
LVKNL++TA+VSS++ +P+++ +SCGM KL+ I + +MDK+FLNG+W+G C +S S
Sbjct: 581 LVKNLAVTAIVSSRVMQPLIESFISCGMSKLNDIPTEHIQRMDKIFLNGNWVGSCENSAS 640
Query: 929 FVIRFKHMRRARLIDYQVEIKLDKHQREVRIFSDAGRLLRPLLVVENLKKVRNLKSGVSS 750
FV R + MRR+ LID QVEIK DKH EVR+F+DAGR+LRPLLVVENL K+R K S
Sbjct: 641 FVFRLRCMRRSSLIDPQVEIKRDKHHNEVRVFTDAGRILRPLLVVENLNKIRKPKGRSFS 700
Query: 749 FQSLVNXXXXXXXXXXXXXXXITAWGIRYLLRQDSEMPAYTHCEFDPSFLMGLSCGIIPF 570
F L+ AWGIR+L + + +YTHCE DPSFL+GLSCGIIPF
Sbjct: 701 FHELMQQEIIEFIGVEEEEDIQCAWGIRHLFESEGAISSYTHCELDPSFLLGLSCGIIPF 760
Query: 569 ANHNFARRVLFQAEKHSQQAVGFSTTNPNIRVDTLMHQMYYPQRPLFKTMIADCLGRRDY 390
ANHNFARRVL+Q+EKHSQQA+G+STTNP+IRVDTL HQ+YYPQRPLFKT+IADCLGR DY
Sbjct: 761 ANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDY 820
Query: 389 -SLGLNDGLSRPELFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHFRSYXXXX 213
S G + +RPE FNGQNAIVAVNVH G+NQEDSLVMNRASLERGMFRTEH RSY
Sbjct: 821 ASFGRKNDFARPEYFNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHLRSYKADV 880
Query: 212 XXXXXXXXXXXXXXXEFGKMQSKKGRVDSLDDDGFPYIGASLQTGDIVIGKVAESGEDHS 33
+FGK +SK+GRVD+LDDDG PY+GASLQT DIVIGKV+ESGEDHS
Sbjct: 881 ENKDGTKRLKLKEKIDFGKTESKRGRVDNLDDDGLPYVGASLQTNDIVIGKVSESGEDHS 940
Query: 32 TKLKHTEKGM 3
KLKHTEKGM
Sbjct: 941 IKLKHTEKGM 950
>ref|NP_001177299.1| required to maintain repression7 [Zea mays]
gi|670371411|ref|XP_008666978.1| PREDICTED: required to
maintain repression7 isoform X1 [Zea mays]
gi|283443696|gb|ADB19857.1| required to maintain
repression 7/RNA polymerase D second largest subunit [Zea
mays] gi|297185477|gb|ADI24118.1| RPD2/E2a [Zea mays]
gi|414585188|tpg|DAA35759.1| TPA: putative DNA-directed
RNA polymerase subunit family protein [Zea mays]
Length = 1229
Score = 1187 bits (3072), Expect = 0.0
Identities = 569/910 (62%), Positives = 715/910 (78%), Gaps = 1/910 (0%)
Frame = -1
Query: 2729 DQSCKGSNHRATDCIMETDENNDPMNLAPPDFKMKYLDMNVETLERFCKDASRSFFNEYG 2550
D KG + + D + +++P + AP +DM+VE+LE+FCK+ASRSFF+E G
Sbjct: 53 DVDIKGKSSLSDD--VNGKSSSEPYSNAP-------IDMSVESLEKFCKEASRSFFDEVG 103
Query: 2549 LIHHQITSYNQFITNGIQELFNSLGEVVVEPGYNPSKGGGGEWRHATITYGKISLDKPSF 2370
LI HQI SYN+F+++G+QELF+SLGEV+VEPGY+PSK G G W+HA I +G++ L+KP F
Sbjct: 104 LISHQINSYNEFVSHGLQELFDSLGEVIVEPGYDPSKKGSGGWKHAIIKFGRVKLEKPVF 163
Query: 2369 WAERNDQDEECLRLLPKHARQQNMTYSSKLKVEVRVQVYILEKSDKAKTGKDPFICKRVL 2190
W + DE + P HAR QNMTY+S+L VEV +QVY LEKSDK+KTG D F+ KR
Sbjct: 164 WTGK---DEGSVDFKPWHARLQNMTYASRLIVEVTIQVYSLEKSDKSKTGNDGFVQKRNF 220
Query: 2189 SDDKKEIVIGSMPVMVKSKQCWLDTLDKSDCLYDSGGYFIVKGAEKTFIAQEQRCLTRIW 2010
++ I IG +PVMVKS C L +L++S+CL+D+GGYF+VKG EK FIAQEQRCL R+W
Sbjct: 221 MNETHWIFIGLLPVMVKSNLCLLHSLNESECLFDAGGYFLVKGMEKVFIAQEQRCLRRLW 280
Query: 2009 TTDKPTWTASHISEMKNRRVYVKLIDASKAEGLNGGKVISLYFLYATMPIWIMFFSLGAA 1830
+D+P WT S +SE+K RR+Y+KL++++++E + K+I++ FLYATMP+W++FF+LG +
Sbjct: 281 ISDRPCWTISFMSEIKRRRIYIKLVESTRSEDFSESKIITISFLYATMPVWLLFFALGIS 340
Query: 1829 SDKEVFQMIDLDVCDTSLTNIILATIRDADEQCNGFREEGKSRDYVNSLIKSAKFPPSES 1650
SDKEVF MID+ CD S+ N I ATI+++D+ C FR+ K+R YV+ L+KS++FPP+ES
Sbjct: 341 SDKEVFDMIDMQDCDASVINTISATIKESDKLCEDFRKSDKARQYVDELVKSSRFPPAES 400
Query: 1649 FDEYISKYLFPTISGHREKALFLGYIVKCLLLSYSGKRKCDYKDDFRNKRLDLVGELLAR 1470
FD+YI+++LFP ISG+R KALFLGY+VKCLL++++GKRKCD KDDFRNKRLDL GELL R
Sbjct: 401 FDDYIARFLFPDISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGR 460
Query: 1469 ELRAHIRHAEKSMVKSMQRDLYGDRDLQLIERYWDASIITNGLNRAFSTGQWCHPYRRTE 1290
ELRA +R AEK MVK++QRDL DR+LQ +ERY DASI+TNGLNRAFSTG WCHPY+R E
Sbjct: 461 ELRAQLRLAEKRMVKAIQRDLNSDRELQDLERYIDASIVTNGLNRAFSTGSWCHPYKRAE 520
Query: 1289 RCSGVVANLRRTNPLQMISDLRKSRQQVAYAGKAGDARYPNPSYWGKVCFLSTTDGENCG 1110
RCSG+VA LRRTNPLQM+SDLRK+RQ+VAYAGKAGDARYPNPSYWGK+CF+ST DGENCG
Sbjct: 521 RCSGIVATLRRTNPLQMMSDLRKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCG 580
Query: 1109 LVKNLSITALVSSKITEPILDKLVSCGMEKLDQISVSSLSKMDKVFLNGDWIGVCLDSKS 930
LVKNL++TA+VSS++ +P+++ +SCGM KL+ I + +MDK+FLNG+W+G C +S S
Sbjct: 581 LVKNLAVTAIVSSRVMQPLIESFISCGMSKLNDIPTEHIQRMDKIFLNGNWVGSCENSAS 640
Query: 929 FVIRFKHMRRARLIDYQVEIKLDKHQREVRIFSDAGRLLRPLLVVENLKKVRNLKSGVSS 750
FV R + MRR+ LID QVEIK DKH EVR+F+DAGR+LRPLLVVENL K+R K S
Sbjct: 641 FVFRLRCMRRSSLIDPQVEIKRDKHHNEVRVFTDAGRILRPLLVVENLNKIRKPKGRSFS 700
Query: 749 FQSLVNXXXXXXXXXXXXXXXITAWGIRYLLRQDSEMPAYTHCEFDPSFLMGLSCGIIPF 570
F L+ AWGIR+L + + +YTHCE DPSFL+GLSCGIIPF
Sbjct: 701 FHELMQQEIIEFIGVEEEEDIQCAWGIRHLFESEGAISSYTHCELDPSFLLGLSCGIIPF 760
Query: 569 ANHNFARRVLFQAEKHSQQAVGFSTTNPNIRVDTLMHQMYYPQRPLFKTMIADCLGRRDY 390
ANHNFARRVL+Q+EKHSQQA+G+STTNP+IRVDTL HQ+YYPQRPLFKT+IADCLGR DY
Sbjct: 761 ANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDY 820
Query: 389 -SLGLNDGLSRPELFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHFRSYXXXX 213
S G + +RPE FNGQNAIVAVNVH G+NQEDSLVMNRASLERGMFRTEH RSY
Sbjct: 821 ASFGRKNDFARPEYFNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHLRSYKADV 880
Query: 212 XXXXXXXXXXXXXXXEFGKMQSKKGRVDSLDDDGFPYIGASLQTGDIVIGKVAESGEDHS 33
+FGK +SK+GRVD+LDDDG PY+GASLQT DIVIGKV+ESGEDHS
Sbjct: 881 ENKDGTKRLKLKEKIDFGKTESKRGRVDNLDDDGLPYVGASLQTNDIVIGKVSESGEDHS 940
Query: 32 TKLKHTEKGM 3
KLKHTEKGM
Sbjct: 941 IKLKHTEKGM 950
>tpg|DAA35758.1| TPA: putative DNA-directed RNA polymerase subunit family protein [Zea
mays]
Length = 1063
Score = 1187 bits (3072), Expect = 0.0
Identities = 569/910 (62%), Positives = 715/910 (78%), Gaps = 1/910 (0%)
Frame = -1
Query: 2729 DQSCKGSNHRATDCIMETDENNDPMNLAPPDFKMKYLDMNVETLERFCKDASRSFFNEYG 2550
D KG + + D + +++P + AP +DM+VE+LE+FCK+ASRSFF+E G
Sbjct: 53 DVDIKGKSSLSDD--VNGKSSSEPYSNAP-------IDMSVESLEKFCKEASRSFFDEVG 103
Query: 2549 LIHHQITSYNQFITNGIQELFNSLGEVVVEPGYNPSKGGGGEWRHATITYGKISLDKPSF 2370
LI HQI SYN+F+++G+QELF+SLGEV+VEPGY+PSK G G W+HA I +G++ L+KP F
Sbjct: 104 LISHQINSYNEFVSHGLQELFDSLGEVIVEPGYDPSKKGSGGWKHAIIKFGRVKLEKPVF 163
Query: 2369 WAERNDQDEECLRLLPKHARQQNMTYSSKLKVEVRVQVYILEKSDKAKTGKDPFICKRVL 2190
W + DE + P HAR QNMTY+S+L VEV +QVY LEKSDK+KTG D F+ KR
Sbjct: 164 WTGK---DEGSVDFKPWHARLQNMTYASRLIVEVTIQVYSLEKSDKSKTGNDGFVQKRNF 220
Query: 2189 SDDKKEIVIGSMPVMVKSKQCWLDTLDKSDCLYDSGGYFIVKGAEKTFIAQEQRCLTRIW 2010
++ I IG +PVMVKS C L +L++S+CL+D+GGYF+VKG EK FIAQEQRCL R+W
Sbjct: 221 MNETHWIFIGLLPVMVKSNLCLLHSLNESECLFDAGGYFLVKGMEKVFIAQEQRCLRRLW 280
Query: 2009 TTDKPTWTASHISEMKNRRVYVKLIDASKAEGLNGGKVISLYFLYATMPIWIMFFSLGAA 1830
+D+P WT S +SE+K RR+Y+KL++++++E + K+I++ FLYATMP+W++FF+LG +
Sbjct: 281 ISDRPCWTISFMSEIKRRRIYIKLVESTRSEDFSESKIITISFLYATMPVWLLFFALGIS 340
Query: 1829 SDKEVFQMIDLDVCDTSLTNIILATIRDADEQCNGFREEGKSRDYVNSLIKSAKFPPSES 1650
SDKEVF MID+ CD S+ N I ATI+++D+ C FR+ K+R YV+ L+KS++FPP+ES
Sbjct: 341 SDKEVFDMIDMQDCDASVINTISATIKESDKLCEDFRKSDKARQYVDELVKSSRFPPAES 400
Query: 1649 FDEYISKYLFPTISGHREKALFLGYIVKCLLLSYSGKRKCDYKDDFRNKRLDLVGELLAR 1470
FD+YI+++LFP ISG+R KALFLGY+VKCLL++++GKRKCD KDDFRNKRLDL GELL R
Sbjct: 401 FDDYIARFLFPDISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGR 460
Query: 1469 ELRAHIRHAEKSMVKSMQRDLYGDRDLQLIERYWDASIITNGLNRAFSTGQWCHPYRRTE 1290
ELRA +R AEK MVK++QRDL DR+LQ +ERY DASI+TNGLNRAFSTG WCHPY+R E
Sbjct: 461 ELRAQLRLAEKRMVKAIQRDLNSDRELQDLERYIDASIVTNGLNRAFSTGSWCHPYKRAE 520
Query: 1289 RCSGVVANLRRTNPLQMISDLRKSRQQVAYAGKAGDARYPNPSYWGKVCFLSTTDGENCG 1110
RCSG+VA LRRTNPLQM+SDLRK+RQ+VAYAGKAGDARYPNPSYWGK+CF+ST DGENCG
Sbjct: 521 RCSGIVATLRRTNPLQMMSDLRKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCG 580
Query: 1109 LVKNLSITALVSSKITEPILDKLVSCGMEKLDQISVSSLSKMDKVFLNGDWIGVCLDSKS 930
LVKNL++TA+VSS++ +P+++ +SCGM KL+ I + +MDK+FLNG+W+G C +S S
Sbjct: 581 LVKNLAVTAIVSSRVMQPLIESFISCGMSKLNDIPTEHIQRMDKIFLNGNWVGSCENSAS 640
Query: 929 FVIRFKHMRRARLIDYQVEIKLDKHQREVRIFSDAGRLLRPLLVVENLKKVRNLKSGVSS 750
FV R + MRR+ LID QVEIK DKH EVR+F+DAGR+LRPLLVVENL K+R K S
Sbjct: 641 FVFRLRCMRRSSLIDPQVEIKRDKHHNEVRVFTDAGRILRPLLVVENLNKIRKPKGRSFS 700
Query: 749 FQSLVNXXXXXXXXXXXXXXXITAWGIRYLLRQDSEMPAYTHCEFDPSFLMGLSCGIIPF 570
F L+ AWGIR+L + + +YTHCE DPSFL+GLSCGIIPF
Sbjct: 701 FHELMQQEIIEFIGVEEEEDIQCAWGIRHLFESEGAISSYTHCELDPSFLLGLSCGIIPF 760
Query: 569 ANHNFARRVLFQAEKHSQQAVGFSTTNPNIRVDTLMHQMYYPQRPLFKTMIADCLGRRDY 390
ANHNFARRVL+Q+EKHSQQA+G+STTNP+IRVDTL HQ+YYPQRPLFKT+IADCLGR DY
Sbjct: 761 ANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDY 820
Query: 389 -SLGLNDGLSRPELFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHFRSYXXXX 213
S G + +RPE FNGQNAIVAVNVH G+NQEDSLVMNRASLERGMFRTEH RSY
Sbjct: 821 ASFGRKNDFARPEYFNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHLRSYKADV 880
Query: 212 XXXXXXXXXXXXXXXEFGKMQSKKGRVDSLDDDGFPYIGASLQTGDIVIGKVAESGEDHS 33
+FGK +SK+GRVD+LDDDG PY+GASLQT DIVIGKV+ESGEDHS
Sbjct: 881 ENKDGTKRLKLKEKIDFGKTESKRGRVDNLDDDGLPYVGASLQTNDIVIGKVSESGEDHS 940
Query: 32 TKLKHTEKGM 3
KLKHTEKGM
Sbjct: 941 IKLKHTEKGM 950
>gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA polymerase D second
largest subunit 2-2 [Zea mays]
Length = 1229
Score = 1184 bits (3064), Expect = 0.0
Identities = 568/910 (62%), Positives = 714/910 (78%), Gaps = 1/910 (0%)
Frame = -1
Query: 2729 DQSCKGSNHRATDCIMETDENNDPMNLAPPDFKMKYLDMNVETLERFCKDASRSFFNEYG 2550
D KG + + D + +++P + AP +DM+VE+LE+FCK+ASRSFF+E G
Sbjct: 53 DVDIKGKSSLSDD--VNGKSSSEPYSNAP-------IDMSVESLEKFCKEASRSFFDEVG 103
Query: 2549 LIHHQITSYNQFITNGIQELFNSLGEVVVEPGYNPSKGGGGEWRHATITYGKISLDKPSF 2370
LI HQI SYN+F+++G+QELF+SLGEV+VEPGY+PSK G G W+HA I +G++ L+KP F
Sbjct: 104 LISHQINSYNEFVSHGLQELFDSLGEVIVEPGYDPSKKGSGGWKHAIIKFGRVKLEKPVF 163
Query: 2369 WAERNDQDEECLRLLPKHARQQNMTYSSKLKVEVRVQVYILEKSDKAKTGKDPFICKRVL 2190
W + DE + P HAR QNMTY+S+L VEV +QVY LEKSDK+KTG D F+ KR
Sbjct: 164 WTGK---DEGSVDFKPWHARLQNMTYASRLIVEVTIQVYSLEKSDKSKTGNDGFVQKRNF 220
Query: 2189 SDDKKEIVIGSMPVMVKSKQCWLDTLDKSDCLYDSGGYFIVKGAEKTFIAQEQRCLTRIW 2010
++ I IG +PVMVKS C L +L++S+CL+D+GGYF+VKG EK FIAQEQRCL R+W
Sbjct: 221 MNETHWIFIGLLPVMVKSNLCLLHSLNESECLFDAGGYFLVKGMEKVFIAQEQRCLRRLW 280
Query: 2009 TTDKPTWTASHISEMKNRRVYVKLIDASKAEGLNGGKVISLYFLYATMPIWIMFFSLGAA 1830
+D+P WT S +SE+K RR+Y+KL++++++E + K+I++ FLYATMP+W++FF+LG +
Sbjct: 281 ISDRPCWTISFMSEIKRRRIYIKLVESTRSEDFSESKIITISFLYATMPVWLLFFALGIS 340
Query: 1829 SDKEVFQMIDLDVCDTSLTNIILATIRDADEQCNGFREEGKSRDYVNSLIKSAKFPPSES 1650
SDKEVF MID+ CD S+ N I ATI+++D+ C FR+ K+R YV+ L+KS++FPP+ES
Sbjct: 341 SDKEVFDMIDMQDCDASVINTISATIKESDKLCEDFRKSDKARQYVDELVKSSRFPPAES 400
Query: 1649 FDEYISKYLFPTISGHREKALFLGYIVKCLLLSYSGKRKCDYKDDFRNKRLDLVGELLAR 1470
FD+YI+++LFP ISG+R KALFLGY+VKCLL++++GKRKCD KDDFRNKRLDL GELL R
Sbjct: 401 FDDYIARFLFPDISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGR 460
Query: 1469 ELRAHIRHAEKSMVKSMQRDLYGDRDLQLIERYWDASIITNGLNRAFSTGQWCHPYRRTE 1290
ELRA +R AEK MVK++QRDL DR+LQ +ERY DASI+TNGLNRAFSTG WCHPY+R E
Sbjct: 461 ELRAQLRLAEKRMVKAIQRDLNSDRELQDLERYIDASIVTNGLNRAFSTGSWCHPYKRAE 520
Query: 1289 RCSGVVANLRRTNPLQMISDLRKSRQQVAYAGKAGDARYPNPSYWGKVCFLSTTDGENCG 1110
RCSG+VA LRRTNPLQM+SDLRK+RQ+VAYAGKAGDARYPNPSYW K+CF+ST DGENCG
Sbjct: 521 RCSGIVATLRRTNPLQMMSDLRKTRQRVAYAGKAGDARYPNPSYWEKLCFMSTPDGENCG 580
Query: 1109 LVKNLSITALVSSKITEPILDKLVSCGMEKLDQISVSSLSKMDKVFLNGDWIGVCLDSKS 930
LVKNL++TA+VSS++ +P+++ +SCGM KL+ I + +MDK+FLNG+W+G C +S S
Sbjct: 581 LVKNLAVTAIVSSRVMQPLIESFISCGMSKLNDIPTEHIQRMDKIFLNGNWVGSCENSAS 640
Query: 929 FVIRFKHMRRARLIDYQVEIKLDKHQREVRIFSDAGRLLRPLLVVENLKKVRNLKSGVSS 750
FV R + MRR+ LID QVEIK DKH EVR+F+DAGR+LRPLLVVENL K+R K S
Sbjct: 641 FVFRLRCMRRSSLIDPQVEIKRDKHHNEVRVFTDAGRILRPLLVVENLNKIRKPKGRSFS 700
Query: 749 FQSLVNXXXXXXXXXXXXXXXITAWGIRYLLRQDSEMPAYTHCEFDPSFLMGLSCGIIPF 570
F L+ AWGIR+L + + +YTHCE DPSFL+GLSCGIIPF
Sbjct: 701 FHELMQQEIIEFIGVEEEEDIQCAWGIRHLFESEGAISSYTHCELDPSFLLGLSCGIIPF 760
Query: 569 ANHNFARRVLFQAEKHSQQAVGFSTTNPNIRVDTLMHQMYYPQRPLFKTMIADCLGRRDY 390
ANHNFARRVL+Q+EKHSQQA+G+STTNP+IRVDTL HQ+YYPQRPLFKT+IADCLGR DY
Sbjct: 761 ANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCLGRSDY 820
Query: 389 -SLGLNDGLSRPELFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHFRSYXXXX 213
S G + +RPE FNGQNAIVAVNVH G+NQEDSLVMNRASLERGMFRTEH RSY
Sbjct: 821 ASFGRKNDFARPEYFNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHLRSYKADV 880
Query: 212 XXXXXXXXXXXXXXXEFGKMQSKKGRVDSLDDDGFPYIGASLQTGDIVIGKVAESGEDHS 33
+FGK +SK+GRVD+LDDDG PY+GASLQT DIVIGKV+ESGEDHS
Sbjct: 881 ENKDGTKRLKLKEKIDFGKTESKRGRVDNLDDDGLPYVGASLQTNDIVIGKVSESGEDHS 940
Query: 32 TKLKHTEKGM 3
KLKHTEKGM
Sbjct: 941 IKLKHTEKGM 950
>emb|CAJ86030.1| B0414F07.4 [Oryza sativa Indica Group]
Length = 1343
Score = 1183 bits (3060), Expect = 0.0
Identities = 573/925 (61%), Positives = 701/925 (75%), Gaps = 52/925 (5%)
Frame = -1
Query: 2621 LDMNVETLERFCKDASRSFFNEYGLIHHQITSYNQFITNGIQELFNSLGEVVVEPGYNPS 2442
+DM++ +LE+FCK+ASRSFF+E GLI HQI SYN+F+++G+QELF+SLGEV VEP Y+PS
Sbjct: 140 VDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPS 199
Query: 2441 KGGGGEWRHATITYGKISLDKPSFWAERNDQDEECLRLLPKHARQQNMTYSSKLKVEVRV 2262
G G WRHA I +G++ L++P FW+ D DE+ L+L P+HAR QNMTYSSK+KVEV
Sbjct: 200 NRGPGGWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHF 259
Query: 2261 QVYILEKSDKAKTGKDPFICKRVLSDDKKEIVIGSMPVMVKSKQCWLDTLDKSDCLYDSG 2082
QVY +EKSDKAKTG D F KR + ++ I IG +PVMV S CWL L +SDC +DSG
Sbjct: 260 QVYSMEKSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSG 319
Query: 2081 GYFIVKGAEK---------------------------TFIAQEQRCLTRIWTTDKPTWTA 1983
GYF++KG EK FIAQEQ+CLTRIW D+P W
Sbjct: 320 GYFLIKGMEKDELQGCGGKLYSRNLCLNGKLETPTQKVFIAQEQKCLTRIWVEDRPCWMV 379
Query: 1982 SHISEMKNRRVYVKLIDASKAEGLNGGKVISLYFLYATMPIWIMFFSLGAASDKEVFQMI 1803
S +S ++ RR+Y+KLID++ E +GGK+IS+ FLYA MPIW+MFF+LG +SDK++F +I
Sbjct: 380 SFLSPIRRRRIYIKLIDSANNEDASGGKIISISFLYANMPIWLMFFALGISSDKDIFDVI 439
Query: 1802 DLDVCDTSLTNIILATIRDADEQCNGFREEGKSRDYVNSLIKSAKFPPSESFDEYISKYL 1623
+++ CD + N I ATI+++DE C GFR+ K+R YV+ LIK++KFPP+E FD+YI+KYL
Sbjct: 440 NMEDCDACVINTITATIKESDELCEGFRKSDKARQYVDELIKNSKFPPAEPFDDYIAKYL 499
Query: 1622 FPTISGHREKALFLGYIVKCLLLSYSGKRKCDYKDDFRNKRLDLVGELLARELRAHIRHA 1443
FP+ISG+R KALFLGY+VKCLL++++GKRKCD KDDFRNKRLDL GELL RELRAHIRHA
Sbjct: 500 FPSISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHA 559
Query: 1442 EKSMVKSMQRDLYGDRDLQLIERYWDASIITNGLNRAFSTGQWCHPYRRTERCSGVVANL 1263
E+ MVK++QRDL +R+LQ + Y DASIITNGLNRAFSTG WCHPY+R ERC+G+VA L
Sbjct: 560 ERLMVKALQRDLNSERELQEFDHYLDASIITNGLNRAFSTGSWCHPYKRNERCAGIVATL 619
Query: 1262 RRTNPLQMISDLRKSRQQVAYAGKAGDARYPNPSYWGKVCFLSTTDGENCGLVKNLSITA 1083
RRTNPLQMISDLRK+RQ+VAYAGKAGDARYPNPSYWGK+CF+ST DGENCGLVKNL++TA
Sbjct: 620 RRTNPLQMISDLRKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTA 679
Query: 1082 LVSSKITEPILDKLVSCGMEKLDQISVSSLSKMDKVFLNGDWIGVCLDSKSFVIRFKHMR 903
VSS++ P++D+ +SCGM KL +I + +MDK+FLNGDW+G C D SFV+R + MR
Sbjct: 680 TVSSRVAPPLIDRFISCGMNKLHEIPTEEVPRMDKIFLNGDWVGSCSDPASFVLRLRCMR 739
Query: 902 RARLIDYQVEIKLDKHQREVRIFSDAGRLLRPLLVVENLKKVRNLKSGVSSFQSLVNXXX 723
R+ LID QVEIK DKHQREVR+FSDAGR+LRPLLVVENL K+R K SFQ L+
Sbjct: 740 RSGLIDPQVEIKWDKHQREVRVFSDAGRILRPLLVVENLNKIRRPKGSSYSFQWLMQQEI 799
Query: 722 XXXXXXXXXXXXITAWGIRYLLRQDSEMP----------------------AYTHCEFDP 609
+AWGIR L + E P YTHCE D
Sbjct: 800 IEFIGVEEEEDIRSAWGIRNLFESEEEAPMVKMNKAEDVFNVKRKIGGEVSGYTHCELDL 859
Query: 608 SFLMGLSCGIIPFANHNFARRVLFQAEKHSQQAVGFSTTNPNIRVDTLMHQMYYPQRPLF 429
SFL+GLSCGIIPFANHNFARRVL+Q+EKHSQQA+G+STTNP+IRVDTL HQ+YYPQRPLF
Sbjct: 860 SFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLF 919
Query: 428 KTMIADCLGRRDYSLGLNDGLSRPELFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMF 249
KT+IADC+GR +Y+ G D +RPE FNGQNAIVAVNVH G+NQEDSLVMNRASLERGMF
Sbjct: 920 KTVIADCIGRSEYTFGRKDDFARPEYFNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMF 979
Query: 248 RTEHFRSY---XXXXXXXXXXXXXXXXXXXEFGKMQSKKGRVDSLDDDGFPYIGASLQTG 78
RTEHFR+Y +FGKMQSK+GRVD+LDDDG PY+GASLQ+G
Sbjct: 980 RTEHFRNYKAEVENKGGPGGNKRLKMKDKIDFGKMQSKRGRVDNLDDDGLPYVGASLQSG 1039
Query: 77 DIVIGKVAESGEDHSTKLKHTEKGM 3
DIVIGKV+ESGEDHS KLKHTEKGM
Sbjct: 1040 DIVIGKVSESGEDHSIKLKHTEKGM 1064
>emb|CAD41847.2| OSJNBb0079B02.6 [Oryza sativa Japonica Group]
Length = 1343
Score = 1182 bits (3057), Expect = 0.0
Identities = 572/925 (61%), Positives = 701/925 (75%), Gaps = 52/925 (5%)
Frame = -1
Query: 2621 LDMNVETLERFCKDASRSFFNEYGLIHHQITSYNQFITNGIQELFNSLGEVVVEPGYNPS 2442
+DM++ +LE+FCK+ASRSFF+E GLI HQI SYN+F+++G+QELF+SLGEV VEP Y+PS
Sbjct: 140 VDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPS 199
Query: 2441 KGGGGEWRHATITYGKISLDKPSFWAERNDQDEECLRLLPKHARQQNMTYSSKLKVEVRV 2262
G G WRHA I +G++ L++P FW+ D DE+ L+L P+HAR QNMTYSSK+KVEV
Sbjct: 200 NRGPGGWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHF 259
Query: 2261 QVYILEKSDKAKTGKDPFICKRVLSDDKKEIVIGSMPVMVKSKQCWLDTLDKSDCLYDSG 2082
QVY +EKSDKAKTG D F KR + ++ I IG +PVMV S CWL L +SDC +DSG
Sbjct: 260 QVYSMEKSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSG 319
Query: 2081 GYFIVKGAEK---------------------------TFIAQEQRCLTRIWTTDKPTWTA 1983
GYF++KG EK FIAQEQ+CLTRIW D+P W
Sbjct: 320 GYFLIKGMEKDELQGCGGKLYSRNLCLNGKLETPTQKVFIAQEQKCLTRIWVEDRPCWMV 379
Query: 1982 SHISEMKNRRVYVKLIDASKAEGLNGGKVISLYFLYATMPIWIMFFSLGAASDKEVFQMI 1803
S +S ++ RR+Y+KLID++ E +GGK+IS+ FLYA MPIW+MFF+LG +SDK++F +I
Sbjct: 380 SFLSPIRRRRIYIKLIDSANNEDASGGKIISISFLYANMPIWLMFFALGISSDKDIFDVI 439
Query: 1802 DLDVCDTSLTNIILATIRDADEQCNGFREEGKSRDYVNSLIKSAKFPPSESFDEYISKYL 1623
+++ CD + N I ATI+++DE C GFR+ K+R YV+ LIK++KFPP+E FD+YI+KYL
Sbjct: 440 NMEDCDACVINTITATIKESDELCEGFRKSDKARQYVDELIKNSKFPPAEPFDDYIAKYL 499
Query: 1622 FPTISGHREKALFLGYIVKCLLLSYSGKRKCDYKDDFRNKRLDLVGELLARELRAHIRHA 1443
FP+ISG+R KALFLGY+VKCLL++++GKRKCD KDDFRNKRLDL GELL RELRAHIRHA
Sbjct: 500 FPSISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHA 559
Query: 1442 EKSMVKSMQRDLYGDRDLQLIERYWDASIITNGLNRAFSTGQWCHPYRRTERCSGVVANL 1263
E+ MVK++QRDL +R+LQ + Y DASIITNGLNRAFSTG WCHPY+R ERC+G+VA L
Sbjct: 560 ERLMVKALQRDLNSERELQEFDHYLDASIITNGLNRAFSTGSWCHPYKRNERCAGIVATL 619
Query: 1262 RRTNPLQMISDLRKSRQQVAYAGKAGDARYPNPSYWGKVCFLSTTDGENCGLVKNLSITA 1083
RRTNPLQMISDLRK+RQ+VAYAGKAGDARYPNPSYWGK+CF+ST DGENCGLVKNL++TA
Sbjct: 620 RRTNPLQMISDLRKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTA 679
Query: 1082 LVSSKITEPILDKLVSCGMEKLDQISVSSLSKMDKVFLNGDWIGVCLDSKSFVIRFKHMR 903
VSS++ P++D+ +SCGM KL +I + +MDK+FLNGDW+G C D SFV+R + MR
Sbjct: 680 TVSSRVAPPLIDRFISCGMNKLHEIPTEEVPRMDKIFLNGDWVGSCSDPASFVLRLRCMR 739
Query: 902 RARLIDYQVEIKLDKHQREVRIFSDAGRLLRPLLVVENLKKVRNLKSGVSSFQSLVNXXX 723
R+ LID QVEIK DKHQREVR+FSDAGR+LRPLLVVENL K+R K SFQ L+
Sbjct: 740 RSGLIDPQVEIKRDKHQREVRVFSDAGRILRPLLVVENLNKIRRPKGSSYSFQWLMQQEI 799
Query: 722 XXXXXXXXXXXXITAWGIRYLLRQDSEMP----------------------AYTHCEFDP 609
+AWGIR L + E P YTHCE D
Sbjct: 800 IEFIGVEEEEDIRSAWGIRNLFESEEEAPMVKMNKAEDVFNVKRKIGGEVSGYTHCELDL 859
Query: 608 SFLMGLSCGIIPFANHNFARRVLFQAEKHSQQAVGFSTTNPNIRVDTLMHQMYYPQRPLF 429
SFL+GLSCGIIPFANHNFARRVL+Q+EKHSQQA+G+STTNP+IRVDTL HQ+YYPQRPLF
Sbjct: 860 SFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLF 919
Query: 428 KTMIADCLGRRDYSLGLNDGLSRPELFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMF 249
KT+IADC+GR +Y+ G D +RPE FNGQNAIVAVNVH G+NQEDS+VMNRASLERGMF
Sbjct: 920 KTVIADCIGRSEYTFGRKDDFARPEYFNGQNAIVAVNVHQGFNQEDSVVMNRASLERGMF 979
Query: 248 RTEHFRSY---XXXXXXXXXXXXXXXXXXXEFGKMQSKKGRVDSLDDDGFPYIGASLQTG 78
RTEHFR+Y +FGKMQSK+GRVD+LDDDG PY+GASLQ+G
Sbjct: 980 RTEHFRNYKAEVENKGGPGGNKRLKMKDKIDFGKMQSKRGRVDNLDDDGLPYVGASLQSG 1039
Query: 77 DIVIGKVAESGEDHSTKLKHTEKGM 3
DIVIGKV+ESGEDHS KLKHTEKGM
Sbjct: 1040 DIVIGKVSESGEDHSIKLKHTEKGM 1064