BLASTX nr result

ID: Anemarrhena21_contig00016425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00016425
         (341 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009411845.1| PREDICTED: AP-4 complex subunit epsilon-like...    72   2e-10
ref|XP_008810151.1| PREDICTED: AP-4 complex subunit epsilon [Pho...    72   2e-10
ref|XP_010909540.1| PREDICTED: AP-4 complex subunit epsilon isof...    71   3e-10
ref|XP_010909539.1| PREDICTED: AP-4 complex subunit epsilon isof...    71   3e-10
ref|XP_002458982.1| hypothetical protein SORBIDRAFT_03g043730 [S...    56   8e-06

>ref|XP_009411845.1| PREDICTED: AP-4 complex subunit epsilon-like [Musa acuminata subsp.
            malaccensis]
          Length = 967

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 15/68 (22%)
 Frame = +1

Query: 181  RAPDLMSLYNDTP---------------SNNRNLHGVTDMTAMKKGPNPQDSLEKDATAR 315
            +APDLM+LY DTP               S+++N     ++ ++KKGPNPQDSL+KDATAR
Sbjct: 889  KAPDLMTLYTDTPPSSNSSISSALGDIHSSDKNSQMAKNVPSIKKGPNPQDSLQKDATAR 948

Query: 316  HVGVTPTG 339
            HVGVTPTG
Sbjct: 949  HVGVTPTG 956


>ref|XP_008810151.1| PREDICTED: AP-4 complex subunit epsilon [Phoenix dactylifera]
          Length = 959

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 37/71 (52%), Positives = 44/71 (61%), Gaps = 17/71 (23%)
 Frame = +1

Query: 175  GPRAPDLMSLYNDTP-----------------SNNRNLHGVTDMTAMKKGPNPQDSLEKD 303
            GP+ PDLM+LY DTP                 + N+N HG T++ AM KG N QDSL+KD
Sbjct: 877  GPKTPDLMALYTDTPPAAVSSGSLNPELADIYTVNKNSHGTTNVAAMNKGQNRQDSLQKD 936

Query: 304  ATARHVGVTPT 336
            ATAR VGVTPT
Sbjct: 937  ATARQVGVTPT 947


>ref|XP_010909540.1| PREDICTED: AP-4 complex subunit epsilon isoform X2 [Elaeis
            guineensis]
          Length = 960

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 37/72 (51%), Positives = 45/72 (62%), Gaps = 17/72 (23%)
 Frame = +1

Query: 175  GPRAPDLMSLYNDTP-----------------SNNRNLHGVTDMTAMKKGPNPQDSLEKD 303
            GP+APDLM+LY D P                 + N+N H   ++ A+KKGPN QDSL+KD
Sbjct: 878  GPKAPDLMALYADAPPAGVSSGSLNPALADMYTVNKNSHETANVAAVKKGPNLQDSLQKD 937

Query: 304  ATARHVGVTPTG 339
            ATAR VGVTPTG
Sbjct: 938  ATARQVGVTPTG 949


>ref|XP_010909539.1| PREDICTED: AP-4 complex subunit epsilon isoform X1 [Elaeis
            guineensis]
          Length = 961

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 37/72 (51%), Positives = 45/72 (62%), Gaps = 17/72 (23%)
 Frame = +1

Query: 175  GPRAPDLMSLYNDTP-----------------SNNRNLHGVTDMTAMKKGPNPQDSLEKD 303
            GP+APDLM+LY D P                 + N+N H   ++ A+KKGPN QDSL+KD
Sbjct: 879  GPKAPDLMALYADAPPAGVSSGSLNPALADMYTVNKNSHETANVAAVKKGPNLQDSLQKD 938

Query: 304  ATARHVGVTPTG 339
            ATAR VGVTPTG
Sbjct: 939  ATARQVGVTPTG 950


>ref|XP_002458982.1| hypothetical protein SORBIDRAFT_03g043730 [Sorghum bicolor]
            gi|241930957|gb|EES04102.1| hypothetical protein
            SORBIDRAFT_03g043730 [Sorghum bicolor]
          Length = 969

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 15/71 (21%)
 Frame = +1

Query: 172  GGPRAPDLMSLYND-TPS--------------NNRNLHGVTDMTAMKKGPNPQDSLEKDA 306
            G  +APDLMS+++D  P+              N+ + H      A KKGP+ QD+L+KDA
Sbjct: 888  GASKAPDLMSIFSDDVPTGVASGSTDPTLGDVNSTSSHKGATAVASKKGPSLQDALQKDA 947

Query: 307  TARHVGVTPTG 339
            TAR VGVTPTG
Sbjct: 948  TARQVGVTPTG 958


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