BLASTX nr result
ID: Anemarrhena21_contig00016354
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00016354
(1020 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010922166.1| PREDICTED: DNA-directed RNA polymerase V sub... 264 7e-68
ref|XP_004978645.1| PREDICTED: DNA-directed RNA polymerase V sub... 242 4e-61
ref|NP_001066119.1| Os12g0139500 [Oryza sativa Japonica Group] g... 241 5e-61
gb|ABA96407.2| RNA polymerase Rpb5, N-terminal domain containing... 241 5e-61
ref|NP_001065723.1| Os11g0143400 [Oryza sativa Japonica Group] g... 239 2e-60
ref|XP_009418150.1| PREDICTED: DNA-directed RNA polymerase V sub... 238 4e-60
ref|XP_010036349.1| PREDICTED: DNA-directed RNA polymerase V sub... 236 1e-59
emb|CBX25472.1| hypothetical_protein [Oryza glaberrima] 236 1e-59
gb|EAY79909.1| hypothetical protein OsI_35073 [Oryza sativa Indi... 236 1e-59
emb|CBI30093.3| unnamed protein product [Vitis vinifera] 234 1e-58
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerase V sub... 234 1e-58
emb|CDP09516.1| unnamed protein product [Coffea canephora] 233 1e-58
ref|XP_011000455.1| PREDICTED: DNA-directed RNA polymerase V sub... 231 5e-58
dbj|BAJ92858.1| predicted protein [Hordeum vulgare subsp. vulgar... 231 6e-58
ref|XP_010247052.1| PREDICTED: DNA-directed RNA polymerases IV a... 230 1e-57
ref|XP_006663193.1| PREDICTED: DNA-directed RNA polymerase V sub... 229 2e-57
gb|ACG37268.1| DNA-directed RNA polymerase II 23 kDa polypeptide... 229 2e-57
ref|NP_001141853.1| uncharacterized protein LOC100273995 [Zea ma... 229 2e-57
ref|XP_006664324.1| PREDICTED: DNA-directed RNA polymerase V sub... 229 2e-57
tpg|DAA39210.1| TPA: DNA-directed RNA polymerase II polypeptide ... 229 2e-57
>ref|XP_010922166.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like isoform X1
[Elaeis guineensis]
Length = 217
Score = 264 bits (675), Expect = 7e-68
Identities = 129/211 (61%), Positives = 161/211 (76%)
Frame = -3
Query: 787 GCLSAFIDTGSVESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDLESL 608
GC+++F+D GSVES R +LARRTVLEMLRDRGY I I TL +FRS+YGE+PD L
Sbjct: 7 GCMNSFVDQGSVESCRYFLARRTVLEMLRDRGYPIPAEQINLTLDEFRSEYGESPDRNRL 66
Query: 607 KISAVLLRDPSKKVLVIFCGTSPVKLSTARDLSMQYGKQNLSRMILVLQSNMTSKSRENM 428
+S L P+ KV VIFCGT PVKL+ R++ MQ GK+NL +IL+LQS MTSK+RE +
Sbjct: 67 SLSYSLSSQPNNKVHVIFCGTEPVKLAVIREIYMQVGKENLYGLILILQSKMTSKAREAI 126
Query: 427 KLLFPFKVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPRMLENDAI 248
K +F FKVETFHIT+LL+NITKHVLKP H KYN+++SQLPRMLE DAI
Sbjct: 127 KDIFKFKVETFHITELLVNITKHVLKPRHDVLTEEEKQKLLKKYNVEDSQLPRMLETDAI 186
Query: 247 ARYYGFEKGTILKITYEGELTKNHVTYRCVM 155
ARYYG +KG ++K+TY+GELT++HVTYRC+M
Sbjct: 187 ARYYGLQKGQVVKVTYDGELTRSHVTYRCIM 217
>ref|XP_004978645.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Setaria
italica]
Length = 240
Score = 242 bits (617), Expect = 4e-61
Identities = 117/210 (55%), Positives = 155/210 (73%), Gaps = 1/210 (0%)
Frame = -3
Query: 784 CLSAFIDTG-SVESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDLESL 608
C+S+ ID G SVESHRL+LARRT LEMLRDRGY + ++ +TL +FR+ + E P+LE L
Sbjct: 30 CISSMIDRGGSVESHRLFLARRTALEMLRDRGYSVPEAELARTLPEFRAWWAEKPELERL 89
Query: 607 KISAVLLRDPSKKVLVIFCGTSPVKLSTARDLSMQYGKQNLSRMILVLQSNMTSKSRENM 428
S L D S KV V+FC PVK++ R++ + ++NLSR+IL+LQS +TSKSRE++
Sbjct: 90 AFSTALAADQSSKVKVVFCPPEPVKIAVIREIYSRVQEENLSRLILILQSKITSKSRESI 149
Query: 427 KLLFPFKVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPRMLENDAI 248
K +FPFKV+TF IT+LL+NITKHVLKP H +YN+ +SQLPRMLE DA+
Sbjct: 150 KEIFPFKVDTFQITELLVNITKHVLKPKHEVLTAEEKAKLLKEYNVVDSQLPRMLETDAV 209
Query: 247 ARYYGFEKGTILKITYEGELTKNHVTYRCV 158
ARY+G KGT++K+TY+ ELT NHVTYRC+
Sbjct: 210 ARYHGLGKGTVVKVTYDSELTGNHVTYRCI 239
>ref|NP_001066119.1| Os12g0139500 [Oryza sativa Japonica Group]
gi|113648626|dbj|BAF29138.1| Os12g0139500 [Oryza sativa
Japonica Group] gi|125535725|gb|EAY82213.1| hypothetical
protein OsI_37416 [Oryza sativa Indica Group]
gi|125578454|gb|EAZ19600.1| hypothetical protein
OsJ_35178 [Oryza sativa Japonica Group]
gi|346703760|emb|CBX24428.1| hypothetical_protein [Oryza
glaberrima]
Length = 227
Score = 241 bits (616), Expect = 5e-61
Identities = 112/209 (53%), Positives = 155/209 (74%)
Frame = -3
Query: 784 CLSAFIDTGSVESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDLESLK 605
C+++ ID GSVESHRL+LARRT +EMLRDRGY + +I +TL +FR+ + E P +E L
Sbjct: 18 CIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLA 77
Query: 604 ISAVLLRDPSKKVLVIFCGTSPVKLSTARDLSMQYGKQNLSRMILVLQSNMTSKSRENMK 425
+ L+ DPSKKV ++FC PVK++T R++ +Q ++NLSR++L+LQS + S++RE +K
Sbjct: 78 FTTTLVSDPSKKVQLVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIK 137
Query: 424 LLFPFKVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPRMLENDAIA 245
+F FKV+ F TDLL+NITKHVLKP H +YN+++SQLPRMLE DA+A
Sbjct: 138 EIFKFKVDIFQATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNVEDSQLPRMLETDAVA 197
Query: 244 RYYGFEKGTILKITYEGELTKNHVTYRCV 158
RYYGF+KGT++K+TY+GELT V YRCV
Sbjct: 198 RYYGFDKGTVVKVTYDGELTGKRVAYRCV 226
>gb|ABA96407.2| RNA polymerase Rpb5, N-terminal domain containing protein,
expressed [Oryza sativa Japonica Group]
Length = 335
Score = 241 bits (616), Expect = 5e-61
Identities = 112/209 (53%), Positives = 155/209 (74%)
Frame = -3
Query: 784 CLSAFIDTGSVESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDLESLK 605
C+++ ID GSVESHRL+LARRT +EMLRDRGY + +I +TL +FR+ + E P +E L
Sbjct: 126 CIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLA 185
Query: 604 ISAVLLRDPSKKVLVIFCGTSPVKLSTARDLSMQYGKQNLSRMILVLQSNMTSKSRENMK 425
+ L+ DPSKKV ++FC PVK++T R++ +Q ++NLSR++L+LQS + S++RE +K
Sbjct: 186 FTTTLVSDPSKKVQLVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIK 245
Query: 424 LLFPFKVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPRMLENDAIA 245
+F FKV+ F TDLL+NITKHVLKP H +YN+++SQLPRMLE DA+A
Sbjct: 246 EIFKFKVDIFQATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNVEDSQLPRMLETDAVA 305
Query: 244 RYYGFEKGTILKITYEGELTKNHVTYRCV 158
RYYGF+KGT++K+TY+GELT V YRCV
Sbjct: 306 RYYGFDKGTVVKVTYDGELTGKRVAYRCV 334
>ref|NP_001065723.1| Os11g0143400 [Oryza sativa Japonica Group]
gi|77548620|gb|ABA91417.1| RNA polymerase Rpb5,
N-terminal domain containing protein, expressed [Oryza
sativa Japonica Group] gi|113644427|dbj|BAF27568.1|
Os11g0143400 [Oryza sativa Japonica Group]
gi|125576186|gb|EAZ17408.1| hypothetical protein
OsJ_32930 [Oryza sativa Japonica Group]
Length = 227
Score = 239 bits (610), Expect = 2e-60
Identities = 111/209 (53%), Positives = 154/209 (73%)
Frame = -3
Query: 784 CLSAFIDTGSVESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDLESLK 605
C+++ ID GSVESHRL+LARRT +EMLRDRGY + +I +TL +FR+ + E P +E L
Sbjct: 18 CIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLA 77
Query: 604 ISAVLLRDPSKKVLVIFCGTSPVKLSTARDLSMQYGKQNLSRMILVLQSNMTSKSRENMK 425
+ L+ DPSKKV ++FC PVK++T R++ +Q ++NLSR++L+LQS + S++RE +K
Sbjct: 78 FTTTLVSDPSKKVQLVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIK 137
Query: 424 LLFPFKVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPRMLENDAIA 245
+F FKV+ F TDLL+NITKHVLKP H +YN+++SQLPRMLE DA+A
Sbjct: 138 EIFKFKVDIFQATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNVEDSQLPRMLETDAVA 197
Query: 244 RYYGFEKGTILKITYEGELTKNHVTYRCV 158
RYYGF+KGT++K+ Y+GELT V YRCV
Sbjct: 198 RYYGFDKGTVVKVIYDGELTGKRVAYRCV 226
>ref|XP_009418150.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Musa
acuminata subsp. malaccensis]
Length = 221
Score = 238 bits (608), Expect = 4e-60
Identities = 115/210 (54%), Positives = 157/210 (74%)
Frame = -3
Query: 784 CLSAFIDTGSVESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDLESLK 605
CL +F+D+G+VESHR +LARRT+LEMLRDRG+ I D+ +L FR+++G+NP LE L+
Sbjct: 12 CLISFVDSGTVESHRYFLARRTLLEMLRDRGFPIPDDDLAISLPAFRARFGDNPKLEDLR 71
Query: 604 ISAVLLRDPSKKVLVIFCGTSPVKLSTARDLSMQYGKQNLSRMILVLQSNMTSKSRENMK 425
IS + +P KK+LVIFCG P KLST R++ K++L+ +ILVLQS MTSK+RE +
Sbjct: 72 ISTTIPSNPRKKLLVIFCGIEPFKLSTVREIYSWVSKEHLTGLILVLQSKMTSKARELTE 131
Query: 424 LLFPFKVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPRMLENDAIA 245
+F F++E F IT+LL+NITKHVLKP H KYN+++ QLPRML++DA+A
Sbjct: 132 EIFKFRLEIFQITELLVNITKHVLKPRHVLLAAEEKEKLIAKYNVEDIQLPRMLKSDAVA 191
Query: 244 RYYGFEKGTILKITYEGELTKNHVTYRCVM 155
RYYGFEKG ++K+TY GELT +H TYRC++
Sbjct: 192 RYYGFEKGQVVKVTYNGELTGHHETYRCIV 221
>ref|XP_010036349.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like
[Eucalyptus grandis] gi|629081447|gb|KCW47892.1|
hypothetical protein EUGRSUZ_K01636 [Eucalyptus grandis]
Length = 238
Score = 236 bits (603), Expect = 1e-59
Identities = 119/210 (56%), Positives = 156/210 (74%), Gaps = 1/210 (0%)
Frame = -3
Query: 784 CLSAFIDTGSVESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDLESLK 605
C+S+++D GSV+SHR YLARRT+LEMLRDRGY I DI+ +LA+FR+ +G++PD++ L+
Sbjct: 29 CMSSYVDEGSVQSHRYYLARRTLLEMLRDRGYAIPSSDIDVSLAEFRATHGQSPDIDRLR 88
Query: 604 ISAVLLRDPSKKVLVIFCGTSPVKLSTARDLSMQYG-KQNLSRMILVLQSNMTSKSRENM 428
IS L DPSK+VLV FC PVK+++ R +S Q K LS +ILVLQ MT+++ + +
Sbjct: 89 ISNSLRSDPSKRVLVYFCNPGPVKVTSIRYISGQIANKDGLSGLILVLQGEMTNQALKAL 148
Query: 427 KLLFPFKVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPRMLENDAI 248
L FPFKV+ F ITDLL+NITKHVLKP H KY+I+E QLPRML+NDAI
Sbjct: 149 DL-FPFKVQVFQITDLLVNITKHVLKPKHRVLTDQEKQRLLKKYSIQEKQLPRMLKNDAI 207
Query: 247 ARYYGFEKGTILKITYEGELTKNHVTYRCV 158
ARYYG EKG ++K+TY G++T HVTYRCV
Sbjct: 208 ARYYGLEKGQVVKVTYSGDITGTHVTYRCV 237
>emb|CBX25472.1| hypothetical_protein [Oryza glaberrima]
Length = 206
Score = 236 bits (603), Expect = 1e-59
Identities = 111/204 (54%), Positives = 151/204 (74%)
Frame = -3
Query: 769 IDTGSVESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDLESLKISAVL 590
ID GSVESHRL+LARRT +EMLRDRGY + +I +TL +FR+ + E P +E L + L
Sbjct: 2 IDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLAFTTTL 61
Query: 589 LRDPSKKVLVIFCGTSPVKLSTARDLSMQYGKQNLSRMILVLQSNMTSKSRENMKLLFPF 410
+ DPSKKV ++FC PVK++T R++ +Q ++NLSR++L+LQS + S++RE +K +F F
Sbjct: 62 VSDPSKKVQLVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIKEIFKF 121
Query: 409 KVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPRMLENDAIARYYGF 230
KV+ F TDLL+NITKHVLKP H +YN+++SQLPRMLE DA+ARYYGF
Sbjct: 122 KVDIFQATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNVEDSQLPRMLETDAVARYYGF 181
Query: 229 EKGTILKITYEGELTKNHVTYRCV 158
+KGT++K+TY+GELT V YRCV
Sbjct: 182 DKGTVVKVTYDGELTGKRVAYRCV 205
>gb|EAY79909.1| hypothetical protein OsI_35073 [Oryza sativa Indica Group]
Length = 227
Score = 236 bits (603), Expect = 1e-59
Identities = 110/209 (52%), Positives = 153/209 (73%)
Frame = -3
Query: 784 CLSAFIDTGSVESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDLESLK 605
C+++ ID GSVESHRL+LARRT +EMLRDRGY + +I +T +FR+ + E P +E L
Sbjct: 18 CIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTPPEFRAWWAEKPGIERLA 77
Query: 604 ISAVLLRDPSKKVLVIFCGTSPVKLSTARDLSMQYGKQNLSRMILVLQSNMTSKSRENMK 425
+ L+ DPSKKV ++FC PVK++T R++ +Q ++NLSR++L+LQS + S++RE +K
Sbjct: 78 FTTTLVSDPSKKVQLVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIK 137
Query: 424 LLFPFKVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPRMLENDAIA 245
+F FKV+ F TDLL+NITKHVLKP H +YN+++SQLPRMLE DA+A
Sbjct: 138 EIFKFKVDIFQATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNVEDSQLPRMLETDAVA 197
Query: 244 RYYGFEKGTILKITYEGELTKNHVTYRCV 158
RYYGF+KGT++K+ Y+GELT V YRCV
Sbjct: 198 RYYGFDKGTVVKVIYDGELTGKRVAYRCV 226
>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
Length = 330
Score = 234 bits (596), Expect = 1e-58
Identities = 119/210 (56%), Positives = 153/210 (72%), Gaps = 1/210 (0%)
Frame = -3
Query: 784 CLSAFIDTGSVESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDLESLK 605
CLS+F+D G +ESHR YLARRT+LEMLRDRGY I DI+ +L DFRS Y + PD + L+
Sbjct: 121 CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 180
Query: 604 ISAVLLRDPSKKVLVIFCGTSPVKLSTARDLSMQ-YGKQNLSRMILVLQSNMTSKSRENM 428
ISA L DPSKK+LVIFCG VK++ R ++ Q K +LS++ILVLQ+++TS++ + +
Sbjct: 181 ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 240
Query: 427 KLLFPFKVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPRMLENDAI 248
LF F+VE F ITDLL+NITKHVLKP H KY++ E QLPRML+ DAI
Sbjct: 241 D-LFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAI 299
Query: 247 ARYYGFEKGTILKITYEGELTKNHVTYRCV 158
ARYYG EKG ++K+ Y GE+T +HVTYRCV
Sbjct: 300 ARYYGLEKGQVVKVIYNGEITGSHVTYRCV 329
>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A [Vitis
vinifera]
Length = 229
Score = 234 bits (596), Expect = 1e-58
Identities = 119/210 (56%), Positives = 153/210 (72%), Gaps = 1/210 (0%)
Frame = -3
Query: 784 CLSAFIDTGSVESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDLESLK 605
CLS+F+D G +ESHR YLARRT+LEMLRDRGY I DI+ +L DFRS Y + PD + L+
Sbjct: 20 CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 79
Query: 604 ISAVLLRDPSKKVLVIFCGTSPVKLSTARDLSMQ-YGKQNLSRMILVLQSNMTSKSRENM 428
ISA L DPSKK+LVIFCG VK++ R ++ Q K +LS++ILVLQ+++TS++ + +
Sbjct: 80 ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 139
Query: 427 KLLFPFKVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPRMLENDAI 248
LF F+VE F ITDLL+NITKHVLKP H KY++ E QLPRML+ DAI
Sbjct: 140 D-LFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAI 198
Query: 247 ARYYGFEKGTILKITYEGELTKNHVTYRCV 158
ARYYG EKG ++K+ Y GE+T +HVTYRCV
Sbjct: 199 ARYYGLEKGQVVKVIYNGEITGSHVTYRCV 228
>emb|CDP09516.1| unnamed protein product [Coffea canephora]
Length = 228
Score = 233 bits (595), Expect = 1e-58
Identities = 116/210 (55%), Positives = 156/210 (74%), Gaps = 1/210 (0%)
Frame = -3
Query: 784 CLSAFIDTGSVESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDLESLK 605
CLS++ID GS+ESHR YL+RRTVLEMLRDRG+ + +I +L DFR+ YG+ PD++ L+
Sbjct: 19 CLSSYIDEGSIESHRYYLSRRTVLEMLRDRGFLVPNSEIGLSLQDFRNNYGQQPDIDRLR 78
Query: 604 ISAVLLRDPSKKVLVIFCGTSPVKLSTARDLSMQY-GKQNLSRMILVLQSNMTSKSRENM 428
ISA+ DPS K+LV+FCG + VK++ R ++ Q K LSR+IL++Q+++TS++ + +
Sbjct: 79 ISALHKDDPSNKILVLFCGPNVVKVNVIRGIANQIMNKDTLSRLILIVQNHITSQAMKAV 138
Query: 427 KLLFPFKVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPRMLENDAI 248
LL PFKVE F ITDLL+N+TKHVLKP H KYNI++ QLPRML+ DAI
Sbjct: 139 DLL-PFKVEIFQITDLLVNVTKHVLKPKHQLLTEEEKQRLLEKYNIEDKQLPRMLQKDAI 197
Query: 247 ARYYGFEKGTILKITYEGELTKNHVTYRCV 158
ARYYG EKG +LK+TY E+T+ HVTYRCV
Sbjct: 198 ARYYGLEKGQVLKVTYNNEITETHVTYRCV 227
>ref|XP_011000455.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Populus
euphratica]
Length = 242
Score = 231 bits (590), Expect = 5e-58
Identities = 114/210 (54%), Positives = 156/210 (74%), Gaps = 1/210 (0%)
Frame = -3
Query: 784 CLSAFIDTGSVESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDLESLK 605
CLS F+D GS ESHR YL+RRTVLEML+DRGY + +I+ +L DFR YG+NPD+E LK
Sbjct: 33 CLSGFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPDIELLK 92
Query: 604 ISAVLLRDPSKKVLVIFCGTSPVKLSTARDLSMQY-GKQNLSRMILVLQSNMTSKSRENM 428
SA DPSK++LVIFCG VK+S R +++Q + +L+ +ILVLQ+N+T+++ + +
Sbjct: 93 FSATHKSDPSKRMLVIFCGLGVVKVSMIRLITVQITDRDSLTGLILVLQNNITNQAMKAL 152
Query: 427 KLLFPFKVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPRMLENDAI 248
L F FK+E F ITDLL+NITKH+LKP H KY+I+E QLPR+L+NDAI
Sbjct: 153 DL-FKFKIEIFQITDLLVNITKHILKPKHQVLSEQAKQRLLKKYSIEEKQLPRLLKNDAI 211
Query: 247 ARYYGFEKGTILKITYEGELTKNHVTYRCV 158
+RYYG E+G ++K+TY+G++T +HVTYRCV
Sbjct: 212 SRYYGLERGQVVKVTYDGDITGSHVTYRCV 241
>dbj|BAJ92858.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531658|dbj|BAJ97833.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 251
Score = 231 bits (589), Expect = 6e-58
Identities = 109/213 (51%), Positives = 153/213 (71%), Gaps = 3/213 (1%)
Frame = -3
Query: 787 GCLSAFIDTGS---VESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDL 617
GC+S+ +D G VES RL+LARRT LEMLRDRGY + ++ +TL +FR+ + E P++
Sbjct: 38 GCISSMVDLGGAAGVESQRLFLARRTALEMLRDRGYSVPEDELARTLPEFRAWWSETPEI 97
Query: 616 ESLKISAVLLRDPSKKVLVIFCGTSPVKLSTARDLSMQYGKQNLSRMILVLQSNMTSKSR 437
E L S L DPS KV ++FC PVK++ R++ ++ ++NLS +IL+LQS +T+++R
Sbjct: 98 ERLSFSTTLASDPSSKVRIVFCPPEPVKIAAIREVHLRIKEENLSCLILILQSKITARAR 157
Query: 436 ENMKLLFPFKVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPRMLEN 257
E++K +F FKV+ F IT+LL+NITKHVLKPNH +YN+ +SQLPRMLE
Sbjct: 158 ESIKEIFKFKVDVFQITELLVNITKHVLKPNHEVLTAEEKAKLLKEYNVVDSQLPRMLET 217
Query: 256 DAIARYYGFEKGTILKITYEGELTKNHVTYRCV 158
DA+ARYYG KGT++K TY+ ELT +HVTYRC+
Sbjct: 218 DAVARYYGLGKGTVVKFTYDNELTVDHVTYRCI 250
>ref|XP_010247052.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 5B-like
[Nelumbo nucifera]
Length = 223
Score = 230 bits (586), Expect = 1e-57
Identities = 117/218 (53%), Positives = 156/218 (71%), Gaps = 4/218 (1%)
Frame = -3
Query: 796 DAHGCLSAFIDTGSVESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDL 617
+ C+ +D GSVESHR YLARRTVLEMLRDRGY I +I+ +L +FRS YG+ PDL
Sbjct: 7 EGKSCICCLVDDGSVESHRYYLARRTVLEMLRDRGYDIPDSEIDCSLQEFRSTYGQKPDL 66
Query: 616 ESLKISAVLLRDPSKKVLVIFCGTSPVKLSTARDLSMQY-GKQNLS---RMILVLQSNMT 449
E +++SA LL DPS+K+LV+FCGT + + AR + Q GK+ LS R+IL+LQS +
Sbjct: 67 ERIRVSASLLSDPSQKILVVFCGTDKINVRIARGIRNQITGKEELSWPTRVILILQSEIL 126
Query: 448 SKSRENMKLLFPFKVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPR 269
++R+ ++ FP KVE F ITDLLINITKHVLKP H KY++++ Q+PR
Sbjct: 127 PQARKEVE-QFPCKVEFFQITDLLINITKHVLKPKHEILTPEEKEKILNKYSLEDKQMPR 185
Query: 268 MLENDAIARYYGFEKGTILKITYEGELTKNHVTYRCVM 155
ML++DAIARYYG EKG ++K+ Y GE+T +HVTYRCV+
Sbjct: 186 MLQSDAIARYYGLEKGQVVKVIYSGEITGSHVTYRCVV 223
>ref|XP_006663193.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Oryza
brachyantha] gi|346703190|emb|CBX25289.1|
hypothetical_protein [Oryza brachyantha]
Length = 288
Score = 229 bits (585), Expect = 2e-57
Identities = 108/210 (51%), Positives = 153/210 (72%), Gaps = 1/210 (0%)
Frame = -3
Query: 784 CLSAFID-TGSVESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDLESL 608
C+++ +D +GSVES RL+LARRT LEMLRDRGY + +I +TL +FR+ +GE ++E L
Sbjct: 78 CIASMVDRSGSVESKRLFLARRTALEMLRDRGYSVPEEEIARTLPEFRAWWGEKSEIERL 137
Query: 607 KISAVLLRDPSKKVLVIFCGTSPVKLSTARDLSMQYGKQNLSRMILVLQSNMTSKSRENM 428
+ L+ DPSKKV ++FC PVK++T R++ Q +NLSR+IL+LQS + S++RE++
Sbjct: 138 AFTTTLVSDPSKKVQIVFCPPEPVKIATIREIYRQTEGENLSRLILILQSRILSRARESI 197
Query: 427 KLLFPFKVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPRMLENDAI 248
K +F KV+ F +T+LL+NITKHVLKP H +YN+++SQLPRMLE D +
Sbjct: 198 KEIFKLKVDIFQVTELLVNITKHVLKPKHEVLSAAQKAKLLKQYNVEDSQLPRMLETDPV 257
Query: 247 ARYYGFEKGTILKITYEGELTKNHVTYRCV 158
ARYYG +KGT++K+ Y+ ELT NHV YRCV
Sbjct: 258 ARYYGLDKGTVVKVIYDSELTGNHVAYRCV 287
>gb|ACG37268.1| DNA-directed RNA polymerase II 23 kDa polypeptide [Zea mays]
Length = 264
Score = 229 bits (584), Expect = 2e-57
Identities = 112/210 (53%), Positives = 148/210 (70%), Gaps = 1/210 (0%)
Frame = -3
Query: 784 CLSAFIDTG-SVESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDLESL 608
C+S +D G SVESHRL+LARRT LEMLRDRGY + ++ +TL +FR+ + P+LE L
Sbjct: 54 CISTMLDRGGSVESHRLFLARRTALEMLRDRGYAVPEEELARTLPEFRAWWEYRPELERL 113
Query: 607 KISAVLLRDPSKKVLVIFCGTSPVKLSTARDLSMQYGKQNLSRMILVLQSNMTSKSRENM 428
S L DPS KV V+FC PVK++ R + + +NLSR+IL+LQ + S +RE++
Sbjct: 114 AFSTTLASDPSSKVKVVFCPPGPVKIAAIRLIYTEVKDENLSRLILILQGKIMSTTRESI 173
Query: 427 KLLFPFKVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPRMLENDAI 248
K +F FKV+TF IT+LL+NITKHVLKP H +YN+ +SQLPRMLENDA+
Sbjct: 174 KEIFRFKVDTFQITELLVNITKHVLKPKHEVLTAEGKAKLLKEYNVVDSQLPRMLENDAV 233
Query: 247 ARYYGFEKGTILKITYEGELTKNHVTYRCV 158
ARYYG KGT++K+ Y+ ELT NHVTYRC+
Sbjct: 234 ARYYGLGKGTVVKVIYDSELTGNHVTYRCI 263
>ref|NP_001141853.1| uncharacterized protein LOC100273995 [Zea mays]
gi|194706176|gb|ACF87172.1| unknown [Zea mays]
Length = 248
Score = 229 bits (584), Expect = 2e-57
Identities = 112/210 (53%), Positives = 148/210 (70%), Gaps = 1/210 (0%)
Frame = -3
Query: 784 CLSAFIDTG-SVESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDLESL 608
C+S +D G SVESHRL+LARRT LEMLRDRGY + ++ +TL +FR+ + P+LE L
Sbjct: 38 CISTMLDRGGSVESHRLFLARRTALEMLRDRGYAVPEEELARTLPEFRAWWEYRPELERL 97
Query: 607 KISAVLLRDPSKKVLVIFCGTSPVKLSTARDLSMQYGKQNLSRMILVLQSNMTSKSRENM 428
S L DPS KV V+FC PVK++ R + + +NLSR+IL+LQ + S +RE++
Sbjct: 98 AFSTTLTSDPSSKVKVVFCPPGPVKIAAIRLIYTEVKDENLSRLILILQGKIMSTTRESI 157
Query: 427 KLLFPFKVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPRMLENDAI 248
K +F FKV+TF IT+LL+NITKHVLKP H +YN+ +SQLPRMLENDA+
Sbjct: 158 KEIFRFKVDTFQITELLVNITKHVLKPKHEVLTAEGKAKLLKEYNVVDSQLPRMLENDAV 217
Query: 247 ARYYGFEKGTILKITYEGELTKNHVTYRCV 158
ARYYG KGT++K+ Y+ ELT NHVTYRC+
Sbjct: 218 ARYYGLGKGTVVKVIYDSELTGNHVTYRCI 247
>ref|XP_006664324.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Oryza
brachyantha]
Length = 283
Score = 229 bits (584), Expect = 2e-57
Identities = 108/210 (51%), Positives = 153/210 (72%), Gaps = 1/210 (0%)
Frame = -3
Query: 784 CLSAFID-TGSVESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDLESL 608
C+++ +D +GSVES RL+LARRT LEMLRDRGY + +I +TL +FR+ +GE ++E L
Sbjct: 73 CIASMVDRSGSVESKRLFLARRTALEMLRDRGYSVPDEEIARTLPEFRAWWGEKSEIERL 132
Query: 607 KISAVLLRDPSKKVLVIFCGTSPVKLSTARDLSMQYGKQNLSRMILVLQSNMTSKSRENM 428
+ L+ DPSKKV ++FC PVK++T R++ Q +NLSR+IL+LQS + S++RE++
Sbjct: 133 AFTTTLVSDPSKKVQIVFCPPEPVKIATIREIYRQTEGENLSRLILILQSRILSRARESI 192
Query: 427 KLLFPFKVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPRMLENDAI 248
K +F KV+ F +T+LL+NITKHVLKP H +YN+++SQLPRMLE D +
Sbjct: 193 KEIFKLKVDIFQVTELLVNITKHVLKPKHEVLSAAQKAKLLKQYNVEDSQLPRMLETDPV 252
Query: 247 ARYYGFEKGTILKITYEGELTKNHVTYRCV 158
ARYYG +KGT++K+ Y+ ELT NHV YRCV
Sbjct: 253 ARYYGLDKGTVVKVIYDSELTGNHVAYRCV 282
>tpg|DAA39210.1| TPA: DNA-directed RNA polymerase II polypeptide [Zea mays]
Length = 263
Score = 229 bits (584), Expect = 2e-57
Identities = 112/210 (53%), Positives = 148/210 (70%), Gaps = 1/210 (0%)
Frame = -3
Query: 784 CLSAFIDTG-SVESHRLYLARRTVLEMLRDRGYGIGVRDIEQTLADFRSQYGENPDLESL 608
C+S +D G SVESHRL+LARRT LEMLRDRGY + ++ +TL +FR+ + P+LE L
Sbjct: 53 CISTMLDRGGSVESHRLFLARRTALEMLRDRGYAVPEEELARTLPEFRAWWEYRPELERL 112
Query: 607 KISAVLLRDPSKKVLVIFCGTSPVKLSTARDLSMQYGKQNLSRMILVLQSNMTSKSRENM 428
S L DPS KV V+FC PVK++ R + + +NLSR+IL+LQ + S +RE++
Sbjct: 113 AFSTTLTSDPSSKVKVVFCPPGPVKIAAIRLIYTEVKDENLSRLILILQGKIMSTTRESI 172
Query: 427 KLLFPFKVETFHITDLLINITKHVLKPNHXXXXXXXXXXXXXKYNIKESQLPRMLENDAI 248
K +F FKV+TF IT+LL+NITKHVLKP H +YN+ +SQLPRMLENDA+
Sbjct: 173 KEIFRFKVDTFQITELLVNITKHVLKPKHEVLTAEGKAKLLKEYNVVDSQLPRMLENDAV 232
Query: 247 ARYYGFEKGTILKITYEGELTKNHVTYRCV 158
ARYYG KGT++K+ Y+ ELT NHVTYRC+
Sbjct: 233 ARYYGLGKGTVVKVIYDSELTGNHVTYRCI 262