BLASTX nr result
ID: Anemarrhena21_contig00016119
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00016119
(1173 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010917517.1| PREDICTED: probable RNA-dependent RNA polyme... 528 e-147
ref|XP_010917515.1| PREDICTED: probable RNA-dependent RNA polyme... 528 e-147
ref|XP_009381445.1| PREDICTED: probable RNA-dependent RNA polyme... 528 e-147
ref|XP_008812977.1| PREDICTED: probable RNA-dependent RNA polyme... 526 e-146
ref|XP_010275353.1| PREDICTED: probable RNA-dependent RNA polyme... 503 e-140
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 487 e-135
emb|CDP05596.1| unnamed protein product [Coffea canephora] 483 e-133
sp|Q0DXS3.2|RDR1_ORYSJ RecName: Full=Probable RNA-dependent RNA ... 482 e-133
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th... 481 e-133
emb|CBI26820.3| unnamed protein product [Vitis vinifera] 479 e-132
ref|XP_002284914.1| PREDICTED: probable RNA-dependent RNA polyme... 479 e-132
ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 479 e-132
ref|XP_008367010.1| PREDICTED: probable RNA-dependent RNA polyme... 478 e-132
ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 478 e-132
ref|XP_012072325.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 478 e-132
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida] 478 e-132
ref|XP_006647856.1| PREDICTED: probable RNA-dependent RNA polyme... 477 e-132
ref|XP_008367057.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 476 e-131
ref|XP_009356261.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 476 e-131
ref|XP_008389159.1| PREDICTED: probable RNA-dependent RNA polyme... 476 e-131
>ref|XP_010917517.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X2 [Elaeis
guineensis] gi|743774333|ref|XP_010917518.1| PREDICTED:
probable RNA-dependent RNA polymerase 1 isoform X2
[Elaeis guineensis]
Length = 1075
Score = 528 bits (1361), Expect = e-147
Identities = 256/323 (79%), Positives = 282/323 (87%), Gaps = 2/323 (0%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AVDVP L HMVDCVVFPQKGKRPHPNECSGSDLDGD+YFV+WD +LIPPR V PM+YT A
Sbjct: 728 AVDVPELHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDADLIPPRVVTPMDYTSA 787
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
P+E LDHDVTIEEV EYFTNYIVNDSLGIIANAHTVFAD+ PLKAES EC ELA+LFSIA
Sbjct: 788 PSEILDHDVTIEEVMEYFTNYIVNDSLGIIANAHTVFADKKPLKAESEECTELARLFSIA 847
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPAEIP +LHVKEYPDFMEKLDKVTY S+GVIGKL+RA+KDH+ G IKAFT
Sbjct: 848 VDFPKTGVPAEIPTHLHVKEYPDFMEKLDKVTYESKGVIGKLYRAIKDHTW--GQIKAFT 905
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
KE+ARKSYD DMEVDGF +YLDEA +FK EYD+KLG L++ Y IKTEAEILSGSIM+ SK
Sbjct: 906 KEMARKSYDPDMEVDGFEEYLDEAFLFKGEYDFKLGNLLEHYGIKTEAEILSGSIMKMSK 965
Query: 452 SYNKYKDGEAVSKAVRSLRKQARGWFNEKSNVYNPNEDD--AKASAWYHVTYHPAYWGCY 279
++ KYKDGEA+ AVRSLRK+AR WFNEK + +EDD AKASAWYHVTYHP YWGCY
Sbjct: 966 NFTKYKDGEAIGLAVRSLRKEARAWFNEK-RIDCEDEDDVYAKASAWYHVTYHPDYWGCY 1024
Query: 278 NEGCNWPHFLSFAWCVYDKLIVI 210
NEG N PHFLSF WCVYDKL +I
Sbjct: 1025 NEGLNRPHFLSFPWCVYDKLTII 1047
>ref|XP_010917515.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1 [Elaeis
guineensis] gi|743774329|ref|XP_010917516.1| PREDICTED:
probable RNA-dependent RNA polymerase 1 isoform X1
[Elaeis guineensis]
Length = 1129
Score = 528 bits (1361), Expect = e-147
Identities = 256/323 (79%), Positives = 282/323 (87%), Gaps = 2/323 (0%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AVDVP L HMVDCVVFPQKGKRPHPNECSGSDLDGD+YFV+WD +LIPPR V PM+YT A
Sbjct: 782 AVDVPELHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDADLIPPRVVTPMDYTSA 841
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
P+E LDHDVTIEEV EYFTNYIVNDSLGIIANAHTVFAD+ PLKAES EC ELA+LFSIA
Sbjct: 842 PSEILDHDVTIEEVMEYFTNYIVNDSLGIIANAHTVFADKKPLKAESEECTELARLFSIA 901
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPAEIP +LHVKEYPDFMEKLDKVTY S+GVIGKL+RA+KDH+ G IKAFT
Sbjct: 902 VDFPKTGVPAEIPTHLHVKEYPDFMEKLDKVTYESKGVIGKLYRAIKDHTW--GQIKAFT 959
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
KE+ARKSYD DMEVDGF +YLDEA +FK EYD+KLG L++ Y IKTEAEILSGSIM+ SK
Sbjct: 960 KEMARKSYDPDMEVDGFEEYLDEAFLFKGEYDFKLGNLLEHYGIKTEAEILSGSIMKMSK 1019
Query: 452 SYNKYKDGEAVSKAVRSLRKQARGWFNEKSNVYNPNEDD--AKASAWYHVTYHPAYWGCY 279
++ KYKDGEA+ AVRSLRK+AR WFNEK + +EDD AKASAWYHVTYHP YWGCY
Sbjct: 1020 NFTKYKDGEAIGLAVRSLRKEARAWFNEK-RIDCEDEDDVYAKASAWYHVTYHPDYWGCY 1078
Query: 278 NEGCNWPHFLSFAWCVYDKLIVI 210
NEG N PHFLSF WCVYDKL +I
Sbjct: 1079 NEGLNRPHFLSFPWCVYDKLTII 1101
>ref|XP_009381445.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Musa acuminata
subsp. malaccensis]
Length = 1134
Score = 528 bits (1360), Expect = e-147
Identities = 252/323 (78%), Positives = 282/323 (87%), Gaps = 2/323 (0%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AVDVP L HM+DCVVFPQKGKRPHPNECSGSDLDGD+YFV+WDPELIP R V PMEYTPA
Sbjct: 784 AVDVPDLHHMIDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPQRVVLPMEYTPA 843
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
PT+TLDH+VTIEEV EYFTNYIVNDSLGIIANAHTVFADR KAES ECIELAKLFSIA
Sbjct: 844 PTKTLDHNVTIEEVMEYFTNYIVNDSLGIIANAHTVFADRAREKAESMECIELAKLFSIA 903
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPAEIPP L+VKEYPDFMEKLD+V+YVS+GVIGKL+RA+KDH+ GH+KAFT
Sbjct: 904 VDFPKTGVPAEIPPRLYVKEYPDFMEKLDRVSYVSKGVIGKLYRAIKDHTPGFGHVKAFT 963
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
K +A +SYD DMEVDGF++Y EA FK EYD+KLG LMD Y IKTEAEILSG IM+ SK
Sbjct: 964 KLVALRSYDPDMEVDGFKEYTSEAFFFKGEYDFKLGNLMDHYGIKTEAEILSGHIMKMSK 1023
Query: 452 SYNKYKDGEAVSKAVRSLRKQARGWFNEKSNVYNPNEDD--AKASAWYHVTYHPAYWGCY 279
++ K KDGEA+ +AVRSLRK+AR WFNEKS+ ++ +ED+ AKASAWYHVTYHP YWGCY
Sbjct: 1024 TFTKNKDGEAIGRAVRSLRKEARSWFNEKSSDHDHDEDEEYAKASAWYHVTYHPDYWGCY 1083
Query: 278 NEGCNWPHFLSFAWCVYDKLIVI 210
NE N PHFLSF WCVYDKL +I
Sbjct: 1084 NENLNRPHFLSFPWCVYDKLTLI 1106
>ref|XP_008812977.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Phoenix
dactylifera] gi|672186025|ref|XP_008812978.1| PREDICTED:
probable RNA-dependent RNA polymerase 1 [Phoenix
dactylifera]
Length = 1131
Score = 526 bits (1355), Expect = e-146
Identities = 253/323 (78%), Positives = 283/323 (87%), Gaps = 2/323 (0%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AVDVP L HMVDCVVFPQKGKRPHPNECSGSDLDGD+YFV+WD +LIPPREV PM+YT A
Sbjct: 782 AVDVPDLHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDADLIPPREVTPMDYTSA 841
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
P+E LDHDVTIEEV EYFT+YIVNDSLGIIANAHTVFAD+ P KAES CIELA+LFSIA
Sbjct: 842 PSEILDHDVTIEEVMEYFTDYIVNDSLGIIANAHTVFADKEPRKAESESCIELARLFSIA 901
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPAEIP +LHVKEYPDFMEKLDKVTY S+GVIGKLFRA+KDH+++ G IKAFT
Sbjct: 902 VDFPKTGVPAEIPTHLHVKEYPDFMEKLDKVTYESKGVIGKLFRAIKDHTSHLGQIKAFT 961
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
KE+A KSYD DMEVDGF++YLDEA FK EYD+KLG L++ Y IKTEAEILSGSIM+ SK
Sbjct: 962 KEMAMKSYDPDMEVDGFKEYLDEAFWFKGEYDFKLGNLLEHYGIKTEAEILSGSIMKMSK 1021
Query: 452 SYNKYKDGEAVSKAVRSLRKQARGWFNEKSNVYNPNEDD--AKASAWYHVTYHPAYWGCY 279
++ KYKDGEA+ A+RSLRK+AR WF+EK + +EDD AKASAWYHVTYHP YWGCY
Sbjct: 1022 TFTKYKDGEAIGLALRSLRKEARAWFDEK-RIDCEDEDDVYAKASAWYHVTYHPDYWGCY 1080
Query: 278 NEGCNWPHFLSFAWCVYDKLIVI 210
NEG N PHFLSF WCVYDKL +I
Sbjct: 1081 NEGLNRPHFLSFPWCVYDKLTLI 1103
>ref|XP_010275353.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962527|ref|XP_010275424.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962530|ref|XP_010275500.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962533|ref|XP_010275583.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962536|ref|XP_010275643.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
gi|719962539|ref|XP_010275710.1| PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nelumbo nucifera]
Length = 1136
Score = 503 bits (1296), Expect = e-140
Identities = 244/323 (75%), Positives = 273/323 (84%), Gaps = 2/323 (0%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AV+VPAL HMVDCVVFPQ+GKRPHPNECSGSDLDGDVYFV WDP+LIPPR++ PMEY P
Sbjct: 786 AVNVPALHHMVDCVVFPQEGKRPHPNECSGSDLDGDVYFVCWDPDLIPPRQIQPMEYLPE 845
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
P+ LDHDVTIEE+EEYFTNYIVN+SLGIIANAHT FAD+ P KAES+ C++LAKLFSIA
Sbjct: 846 PSVNLDHDVTIEEIEEYFTNYIVNESLGIIANAHTAFADKEPKKAESDACLQLAKLFSIA 905
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPAEIP +L+VKEYPDFMEKLDK TYVSE VIGKLFRAVKD + + I++FT
Sbjct: 906 VDFPKTGVPAEIPQHLYVKEYPDFMEKLDKPTYVSERVIGKLFRAVKDIAPQTWSIRSFT 965
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
+E+AR+SYD DMEVDGF DYL +A +K EYD KLG LMD Y IKTEAEILSG+IM+ SK
Sbjct: 966 QEVARRSYDPDMEVDGFEDYLSDAYYYKGEYDSKLGNLMDYYGIKTEAEILSGNIMKLSK 1025
Query: 452 SYNKYKDGEAVSKAVRSLRKQARGWFNEKSNVYNPNEDD--AKASAWYHVTYHPAYWGCY 279
S+ K +D EA+S AVRSLRK+AR WFNEKS P DD AKASAWYHVTYHP YWGCY
Sbjct: 1026 SFTKKRDAEAISLAVRSLRKEARAWFNEKSGP-GPEADDVYAKASAWYHVTYHPDYWGCY 1084
Query: 278 NEGCNWPHFLSFAWCVYDKLIVI 210
NEG HFLSF WCVYDKLI I
Sbjct: 1085 NEGLKRDHFLSFPWCVYDKLIHI 1107
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 487 bits (1254), Expect = e-135
Identities = 232/321 (72%), Positives = 265/321 (82%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AV+VPAL HMVDCVVFPQKG RPHPNECSGSDLDGD+YFV WD ELIPP++ PPM+YTPA
Sbjct: 787 AVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPA 846
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
+ LDHDV IE+VEEYFTNYIVNDSLGIIANAHTVFADR P KA S C++LA+ FSIA
Sbjct: 847 QSMQLDHDVQIEDVEEYFTNYIVNDSLGIIANAHTVFADREPHKARSEPCLQLAEKFSIA 906
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPAEIPP+L+VKEYPDFMEK DK TY S+ VIGKLFRAVKD + ++ I+ FT
Sbjct: 907 VDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFT 966
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
KE+AR+SYD DMEVDGF D++D+A K YDYKLG LMD Y IKTEAEIL+GSIM+ SK
Sbjct: 967 KEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSK 1026
Query: 452 SYNKYKDGEAVSKAVRSLRKQARGWFNEKSNVYNPNEDDAKASAWYHVTYHPAYWGCYNE 273
S+ K +D EA+ AVR+LRK+AR WF EKS ++ AKASAWYHVTYHP YWGCYN
Sbjct: 1027 SFTKRRDAEAIGMAVRALRKEARAWFKEKSGSDTEDDAYAKASAWYHVTYHPDYWGCYNH 1086
Query: 272 GCNWPHFLSFAWCVYDKLIVI 210
G N HFLSF WCVYD+L+ I
Sbjct: 1087 GMNRDHFLSFPWCVYDRLVEI 1107
>emb|CDP05596.1| unnamed protein product [Coffea canephora]
Length = 1112
Score = 483 bits (1242), Expect = e-133
Identities = 232/321 (72%), Positives = 267/321 (83%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AVD+P L HMVDCVVFPQKGKRPH NECSGSDLDGD+YFV WDP+LIPPR+ PM+YTPA
Sbjct: 769 AVDLPTLHHMVDCVVFPQKGKRPHTNECSGSDLDGDIYFVCWDPDLIPPRQDEPMDYTPA 828
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
PT L+H+VTIEEVEEYFTNYIVNDSLGIIANAHTVFADR LKA S C+ELA+LFSIA
Sbjct: 829 PTMQLEHEVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRELLKARSKPCLELARLFSIA 888
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPAEI +L VKEYPDFMEK DK TY S+ VIGKLFR VK+ + ++ I++FT
Sbjct: 889 VDFPKTGVPAEITSHLRVKEYPDFMEKSDKTTYDSQHVIGKLFREVKEIAPHTSSIRSFT 948
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
+E+ARKSYD DMEVDGF DY+DEA +K EYDYKLG LMD Y IKTEAEILSG IM+ S+
Sbjct: 949 REVARKSYDIDMEVDGFEDYVDEAFDYKSEYDYKLGNLMDYYGIKTEAEILSGGIMKMSR 1008
Query: 452 SYNKYKDGEAVSKAVRSLRKQARGWFNEKSNVYNPNEDDAKASAWYHVTYHPAYWGCYNE 273
S+++ KD EAV AVRSLRK+AR WFN N + ++ AKASAWY+VTYHP YWGCYNE
Sbjct: 1009 SFDRRKDAEAVGMAVRSLRKEARTWFNR--NGGHSDDAFAKASAWYYVTYHPRYWGCYNE 1066
Query: 272 GCNWPHFLSFAWCVYDKLIVI 210
G N H++SF WC+YD+LI I
Sbjct: 1067 GLNRAHYISFPWCIYDRLIQI 1087
>sp|Q0DXS3.2|RDR1_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase 1; Short=OsRDR1
Length = 740
Score = 482 bits (1240), Expect = e-133
Identities = 229/324 (70%), Positives = 268/324 (82%), Gaps = 3/324 (0%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AVDVP L HM +CVVFPQ+G RPHPNECSGSDLDGD+YFV+WDP LIPPR V PM+YTPA
Sbjct: 398 AVDVPVLHHMFNCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPA 457
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
PTETLDHDVTIEEVEEYFTNYIVN+SLG+IANAH VFAD+ LKAES+ CIELAKLFSIA
Sbjct: 458 PTETLDHDVTIEEVEEYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIA 517
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPA IPP LHVKEYPDFMEKLDKVTY S+GVIGKL+R +K H+ HIK FT
Sbjct: 518 VDFPKTGVPALIPPELHVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTP---HIKHFT 574
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
+E+AR+SYD DM VDG+ DY+ EA K+EYD+KLG LMD Y IK+EAEI+SG I++ +K
Sbjct: 575 REVARRSYDTDMIVDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAK 634
Query: 452 SYNKYKDGEAVSKAVRSLRKQARGWFNEKS---NVYNPNEDDAKASAWYHVTYHPAYWGC 282
++ K D +A+ AVRSLRK+AR F+E S N + + +AKASAWYHVTYHP +WGC
Sbjct: 635 NFTKKSDADAIRLAVRSLRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVTYHPEFWGC 694
Query: 281 YNEGCNWPHFLSFAWCVYDKLIVI 210
YNEG PHF+SF WC+Y+KL+ I
Sbjct: 695 YNEGYERPHFISFPWCIYEKLLRI 718
>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
Length = 1109
Score = 481 bits (1237), Expect = e-133
Identities = 233/323 (72%), Positives = 262/323 (81%), Gaps = 2/323 (0%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AV+VP L HMVDCVVFPQKG RPHPNECSGSDLDGD+YFV WDPELIP +++PPM+Y+PA
Sbjct: 761 AVNVPDLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPELIPSKQIPPMDYSPA 820
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
PT+ L+H+VTIEEVEEYFTNYIVNDSLGIIANAHTVFADR P KA S+EC LAKLFSIA
Sbjct: 821 PTKPLEHEVTIEEVEEYFTNYIVNDSLGIIANAHTVFADREPRKAMSSECKWLAKLFSIA 880
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPAEIP L VKEYPDFMEK DK TY S VIGKLFR VKD + N I++ T
Sbjct: 881 VDFPKTGVPAEIPQELRVKEYPDFMEKPDKPTYQSYNVIGKLFREVKDLAPNECFIRSLT 940
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
+E + YD DMEVDG+ DY+D+A K YDYKLG LM+ Y IKTEAEILSG IM+ S+
Sbjct: 941 RERLERFYDPDMEVDGYEDYVDDAFYHKSNYDYKLGNLMEYYGIKTEAEILSGGIMKMSR 1000
Query: 452 SYNKYKDGEAVSKAVRSLRKQARGWFNEKSNVYNPNEDD--AKASAWYHVTYHPAYWGCY 279
S+ K +D EA+ AVRSLRK+AR WFNEK N + DD AKASAWYHVTYHP+YWG Y
Sbjct: 1001 SFTKQRDAEAIGVAVRSLRKEARSWFNEKGNGLDSEADDLYAKASAWYHVTYHPSYWGLY 1060
Query: 278 NEGCNWPHFLSFAWCVYDKLIVI 210
NEG N HFLSF WCVYDKLI+I
Sbjct: 1061 NEGMNRNHFLSFPWCVYDKLILI 1083
>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
Length = 919
Score = 479 bits (1234), Expect = e-132
Identities = 231/321 (71%), Positives = 266/321 (82%), Gaps = 2/321 (0%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AV+VP L HMVDCVVFPQKGKRPHPNECSGSDLDGD+YFV WD +LIPP+++ PM+YTPA
Sbjct: 571 AVNVPTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPA 630
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
PT+ LDHDV IEEVEEYFTNYIVNDSLGIIANAHTVFAD+ KA + C ELAKLFSIA
Sbjct: 631 PTKVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIA 690
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPAEIP L VKEYPDFMEK DK TY S+ VIGKLFR VKD + ++ +I++FT
Sbjct: 691 VDFPKTGVPAEIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVKDIAPHNCNIRSFT 750
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
+++AR+SYD DMEV GF DY+ +A +K EYDYKLG LMD Y IKTE+EILSGSIMR SK
Sbjct: 751 RDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIMRMSK 810
Query: 452 SYNKYKDGEAVSKAVRSLRKQARGWFNEKSNVYNPNEDD--AKASAWYHVTYHPAYWGCY 279
S+++ KD EA+ AV+SLRK+AR WFN+ + + DD AKASAWYHVTYHP YWGCY
Sbjct: 811 SFDRRKDAEAIGLAVKSLRKEARTWFNKMGSETDSEADDVYAKASAWYHVTYHPDYWGCY 870
Query: 278 NEGCNWPHFLSFAWCVYDKLI 216
NEG + HFLSF WCVYDKLI
Sbjct: 871 NEGMDRDHFLSFPWCVYDKLI 891
>ref|XP_002284914.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 479 bits (1234), Expect = e-132
Identities = 231/321 (71%), Positives = 266/321 (82%), Gaps = 2/321 (0%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AV+VP L HMVDCVVFPQKGKRPHPNECSGSDLDGD+YFV WD +LIPP+++ PM+YTPA
Sbjct: 773 AVNVPTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPA 832
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
PT+ LDHDV IEEVEEYFTNYIVNDSLGIIANAHTVFAD+ KA + C ELAKLFSIA
Sbjct: 833 PTKVLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIA 892
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPAEIP L VKEYPDFMEK DK TY S+ VIGKLFR VKD + ++ +I++FT
Sbjct: 893 VDFPKTGVPAEIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVKDIAPHNCNIRSFT 952
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
+++AR+SYD DMEV GF DY+ +A +K EYDYKLG LMD Y IKTE+EILSGSIMR SK
Sbjct: 953 RDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIMRMSK 1012
Query: 452 SYNKYKDGEAVSKAVRSLRKQARGWFNEKSNVYNPNEDD--AKASAWYHVTYHPAYWGCY 279
S+++ KD EA+ AV+SLRK+AR WFN+ + + DD AKASAWYHVTYHP YWGCY
Sbjct: 1013 SFDRRKDAEAIGLAVKSLRKEARTWFNKMGSETDSEADDVYAKASAWYHVTYHPDYWGCY 1072
Query: 278 NEGCNWPHFLSFAWCVYDKLI 216
NEG + HFLSF WCVYDKLI
Sbjct: 1073 NEGMDRDHFLSFPWCVYDKLI 1093
>ref|XP_011024314.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Populus
euphratica]
Length = 1132
Score = 479 bits (1233), Expect = e-132
Identities = 229/323 (70%), Positives = 260/323 (80%), Gaps = 2/323 (0%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AVDVPAL HMVDCVVFPQKG RPHPN+CSGSDLDGD+YFV WDPELIP +++ PM+YTP
Sbjct: 783 AVDVPALHHMVDCVVFPQKGPRPHPNQCSGSDLDGDIYFVCWDPELIPSQQISPMDYTPE 842
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
PT LDHDVTIEEVEEYFTNYIVNDSLGIIANAHT FAD+ LKA S C+ELA+ FSIA
Sbjct: 843 PTLQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTAFADKESLKAMSEPCLELARKFSIA 902
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPAEIP L V+EYPDFMEK DK +Y S VIGKLFR VKD + + I++FT
Sbjct: 903 VDFPKTGVPAEIPSNLRVREYPDFMEKPDKPSYESRNVIGKLFREVKDIAPRTSSIRSFT 962
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
++AR+ YD DMEVDGF DY+D+A +K YDYKLG LM+ Y IKTEAE+LSGS M+ SK
Sbjct: 963 SDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGSFMKMSK 1022
Query: 452 SYNKYKDGEAVSKAVRSLRKQARGWFNEKSNVYNPNED--DAKASAWYHVTYHPAYWGCY 279
S+ K +D EA+ AVRSLRK+AR WFNEK + + D DAKASAWYHVTYH YWGCY
Sbjct: 1023 SFTKKRDAEAIGMAVRSLRKEARSWFNEKGSGLDSQADDVDAKASAWYHVTYHHNYWGCY 1082
Query: 278 NEGCNWPHFLSFAWCVYDKLIVI 210
NEG N HFLSF WC+YDKLI I
Sbjct: 1083 NEGMNRDHFLSFPWCLYDKLIQI 1105
>ref|XP_008367010.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Malus domestica]
Length = 1113
Score = 478 bits (1231), Expect = e-132
Identities = 231/324 (71%), Positives = 264/324 (81%), Gaps = 3/324 (0%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AVDVP L HMVDCVVFPQKG RPHPNECSGSDLDGD+Y+V WD ELIP +++ PM+YTPA
Sbjct: 767 AVDVPXLYHMVDCVVFPQKGPRPHPNECSGSDLDGDIYYVCWDKELIPRKQIKPMDYTPA 826
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
PT LDHDVTIEEVEEYF NY+VNDSLGIIANAHTVFAD+ PLKA S ECIELAKLFSIA
Sbjct: 827 PTIELDHDVTIEEVEEYFVNYMVNDSLGIIANAHTVFADKDPLKAMSKECIELAKLFSIA 886
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPA IPP L+ KEYPDFMEKLDK TY S VIG LFR VKD + + G I +FT
Sbjct: 887 VDFPKTGVPAVIPPQLYAKEYPDFMEKLDKPTYQSSNVIGALFREVKDIAPHEGSITSFT 946
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
+ +A++SYD DMEVDGF DY+++A +K YDYKLG LM+ Y IKTEAEILSGS+MR SK
Sbjct: 947 RRVAKQSYDPDMEVDGFEDYIEDAIYYKGNYDYKLGNLMEXYGIKTEAEILSGSVMRMSK 1006
Query: 452 SYNKYKDGEAVSKAVRSLRKQA-RGWFNEKSNVYNPNEDD--AKASAWYHVTYHPAYWGC 282
S+ K +D +++ AVRSLRK+A R WFNEK + DD AKASAWYHVTYHP Y+G
Sbjct: 1007 SFTKRRDADSIRVAVRSLRKEATRAWFNEKGTGLDSGADDVYAKASAWYHVTYHPDYFGT 1066
Query: 281 YNEGCNWPHFLSFAWCVYDKLIVI 210
YNEG N HF+SF WCVYDKL++I
Sbjct: 1067 YNEGMNRDHFISFPWCVYDKLVLI 1090
>ref|XP_011024307.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Populus
euphratica]
Length = 1132
Score = 478 bits (1230), Expect = e-132
Identities = 229/323 (70%), Positives = 259/323 (80%), Gaps = 2/323 (0%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AVDVPAL HMVDCVVFPQKG RPHP ECSGSDLDGD+YFV WDPELIP +++ PM+YTP
Sbjct: 783 AVDVPALHHMVDCVVFPQKGPRPHPKECSGSDLDGDIYFVCWDPELIPSQQISPMDYTPE 842
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
PT LDHDVTIEEVEEYFTNYIVNDSLGIIANAHT FAD+ LKA S C+ELA+ FSIA
Sbjct: 843 PTLQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTAFADKESLKAMSEPCLELARKFSIA 902
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPAEIP L V+EYPDFMEK DK +Y S VIGKLFR VKD + + I++FT
Sbjct: 903 VDFPKTGVPAEIPSNLRVREYPDFMEKPDKPSYESRNVIGKLFREVKDIAPRTSSIRSFT 962
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
++AR+ YD DMEVDGF DY+D+A +K YDYKLG LM+ Y IKTEAE+LSGS M+ SK
Sbjct: 963 SDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGSFMKMSK 1022
Query: 452 SYNKYKDGEAVSKAVRSLRKQARGWFNEKSNVYNPNED--DAKASAWYHVTYHPAYWGCY 279
S+ K +D EA+ AVRSLRK+AR WFNEK + + D DAKASAWYHVTYH YWGCY
Sbjct: 1023 SFTKKRDAEAIGMAVRSLRKEARSWFNEKGSGLDSQADDVDAKASAWYHVTYHHNYWGCY 1082
Query: 278 NEGCNWPHFLSFAWCVYDKLIVI 210
NEG N HFLSF WC+YDKLI I
Sbjct: 1083 NEGMNRDHFLSFPWCLYDKLIQI 1105
>ref|XP_012072325.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Jatropha curcas]
Length = 1096
Score = 478 bits (1229), Expect = e-132
Identities = 228/323 (70%), Positives = 263/323 (81%), Gaps = 2/323 (0%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AV+VP L HMVDCVVFPQKG RPHPNECSGSDLDGD+YFV WDP+LIP ++PPM+YTP
Sbjct: 751 AVNVPDLHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPDLIPRLQIPPMDYTPE 810
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
P+ LDHDVTI+EVEEYFTNYI+NDSLGII+NAHTVFADR P KA S C+ELA FSIA
Sbjct: 811 PSLQLDHDVTIQEVEEYFTNYILNDSLGIISNAHTVFADREPAKAMSKPCLELASKFSIA 870
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPAEI +L VKEYPDFMEK DK TY S+ VIGKLFRAV+D + ++ IK+FT
Sbjct: 871 VDFPKTGVPAEIHSHLRVKEYPDFMEKPDKPTYESQNVIGKLFRAVRDIAPHTSSIKSFT 930
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
E+AR+ YD DMEVDGF DY+D+A +K YDYKLG MD Y I+TEAEIL GSIM+ SK
Sbjct: 931 LEVARQCYDPDMEVDGFEDYIDDAFYYKTNYDYKLGNHMDYYGIRTEAEILGGSIMKMSK 990
Query: 452 SYNKYKDGEAVSKAVRSLRKQARGWFNEKSNVYNPNEDD--AKASAWYHVTYHPAYWGCY 279
++ K +D EA+ AVRSLRK+AR WF E+ + + EDD AKASAWY+VTYHP+YWGCY
Sbjct: 991 AFTKKRDAEAIGLAVRSLRKEARSWFKERGSGLDSEEDDVYAKASAWYYVTYHPSYWGCY 1050
Query: 278 NEGCNWPHFLSFAWCVYDKLIVI 210
NEG N HFLSF WCVYDKLI I
Sbjct: 1051 NEGMNRDHFLSFPWCVYDKLIQI 1073
>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
Length = 775
Score = 478 bits (1229), Expect = e-132
Identities = 229/318 (72%), Positives = 259/318 (81%), Gaps = 2/318 (0%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AVDVPAL HMVDCVVFPQKGKRPHPNECSGSDLDGD+YFV WDP+LIPPR+V PM+YTPA
Sbjct: 463 AVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQPMDYTPA 522
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
P+ LDHDVTIEEVEEYFTNY+VND LG+IANAH VFADR P A S+ CIELA+LFSIA
Sbjct: 523 PSIQLDHDVTIEEVEEYFTNYMVNDGLGVIANAHVVFADREPNMAMSDPCIELAQLFSIA 582
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPAEIP L KEYPDFMEK DK TY SE VIGKLFR VKD +T + I FT
Sbjct: 583 VDFPKTGVPAEIPSQLRPKEYPDFMEKPDKTTYHSEKVIGKLFREVKDKTTQASSITTFT 642
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
+++AR+SYD D+EVDGF DY+DEA +K EYD KLG LMD Y IKTEAE LSG IM+ASK
Sbjct: 643 RDVARRSYDTDLEVDGFEDYIDEAFDYKSEYDKKLGNLMDYYGIKTEAETLSGGIMKASK 702
Query: 452 SYNKYKDGEAVSKAVRSLRKQARGWFNEKSNVYNPNEDD--AKASAWYHVTYHPAYWGCY 279
++++ +D EA+ AVRSLRK+AR WF +S++ DD AKASAWYHV YHP YWGCY
Sbjct: 703 TFDRRRDAEAIGVAVRSLRKEARTWFKRRSDI-----DDLLAKASAWYHVAYHPTYWGCY 757
Query: 278 NEGCNWPHFLSFAWCVYD 225
NEG HF+SF WCVYD
Sbjct: 758 NEGLKRDHFISFPWCVYD 775
>ref|XP_006647856.1| PREDICTED: probable RNA-dependent RNA polymerase 1-like [Oryza
brachyantha]
Length = 1113
Score = 477 bits (1227), Expect = e-132
Identities = 228/324 (70%), Positives = 266/324 (82%), Gaps = 3/324 (0%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AVD+P L HMV+CVVFPQ+G RPHPNECSGSDLDGD+YFV+WD LIPPR V PM+YTPA
Sbjct: 770 AVDLPVLHHMVNCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDSTLIPPRMVAPMDYTPA 829
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
PTETLDHDVTIEEVEEYFTNYIVN+SLGIIANAH VFAD+ LKAES+ CIELAKLFSIA
Sbjct: 830 PTETLDHDVTIEEVEEYFTNYIVNESLGIIANAHVVFADKEDLKAESSPCIELAKLFSIA 889
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPA+I P LHVKEYPDFMEKLDK TY S+GVIGKL+R +K H+ HIK FT
Sbjct: 890 VDFPKTGVPAQIRPELHVKEYPDFMEKLDKATYESKGVIGKLYREIKKHTP---HIKHFT 946
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
++AR+SYD D+ VDG+ DY+ EA KEEYD+KL LMD Y IK+EAEI+SG I++ +K
Sbjct: 947 IDVARRSYDTDLIVDGYEDYITEAMALKEEYDFKLCNLMDHYGIKSEAEIISGCILKMAK 1006
Query: 452 SYNKYKDGEAVSKAVRSLRKQARGWFNEKS---NVYNPNEDDAKASAWYHVTYHPAYWGC 282
++ K D +AV AVRSLRK+AR WF+E S N Y+ + +AKASAWYHVTYHP YWGC
Sbjct: 1007 NFTKNSDADAVRLAVRSLRKEARSWFSEMSSDDNGYDYDASEAKASAWYHVTYHPEYWGC 1066
Query: 281 YNEGCNWPHFLSFAWCVYDKLIVI 210
YNEG PH +SF WC+Y+KL+ I
Sbjct: 1067 YNEGYERPHLISFPWCMYEKLLRI 1090
>ref|XP_008367057.1| PREDICTED: RNA-dependent RNA polymerase 1-like, partial [Malus
domestica]
Length = 683
Score = 476 bits (1226), Expect = e-131
Identities = 228/323 (70%), Positives = 263/323 (81%), Gaps = 2/323 (0%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AVDVP L HMVDCVVFPQKG RPHPNECSGSDLDGD+Y+V WD ELIP +++ PM+YTPA
Sbjct: 338 AVDVPELYHMVDCVVFPQKGPRPHPNECSGSDLDGDIYYVCWDEELIPRKQIEPMDYTPA 397
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
PT LDHDVTIEEVEEYF NY+VNDSLGIIANAHTVFAD+ PLKA S ECIELAKLFSIA
Sbjct: 398 PTIELDHDVTIEEVEEYFVNYMVNDSLGIIANAHTVFADKDPLKAMSAECIELAKLFSIA 457
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPA IPP+L+ KEYPDFMEKLDK TY S VIG LFR VKD + + I +FT
Sbjct: 458 VDFPKTGVPAVIPPHLYAKEYPDFMEKLDKPTYQSSNVIGALFREVKDIAPHESSITSFT 517
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
+++A++SYD DM VDG DY+++A +K YDYKLG LM+ Y IKTEAEILSGS+MR SK
Sbjct: 518 RQVAKQSYDSDMXVDGXEDYIEDAIYYKGNYDYKLGNLMEYYGIKTEAEILSGSVMRMSK 577
Query: 452 SYNKYKDGEAVSKAVRSLRKQARGWFNEKSNVYNPNEDD--AKASAWYHVTYHPAYWGCY 279
S+ K +D E+++ AVRSLRK+AR WFNEK + D AKASAWYHVTYHP Y+G Y
Sbjct: 578 SFTKRRDAESINVAVRSLRKEARAWFNEKGTGLDSGADXVYAKASAWYHVTYHPDYFGTY 637
Query: 278 NEGCNWPHFLSFAWCVYDKLIVI 210
NEG N HF+SF WCVYDKL++I
Sbjct: 638 NEGLNRDHFISFPWCVYDKLVLI 660
>ref|XP_009356261.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
1 [Pyrus x bretschneideri]
Length = 1112
Score = 476 bits (1224), Expect = e-131
Identities = 228/323 (70%), Positives = 261/323 (80%), Gaps = 2/323 (0%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AVDVP L HMVDCVVFPQKG RPHPNECSGSDLDGD+Y+V WD ELIP +++ PM+YTPA
Sbjct: 767 AVDVPELYHMVDCVVFPQKGPRPHPNECSGSDLDGDIYYVCWDKELIPRKQIKPMDYTPA 826
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
PT LDHDVTIEEVEEYF NY+VNDS+GIIANAHTVFAD+ PLKA S ECIELAKLFSIA
Sbjct: 827 PTIELDHDVTIEEVEEYFVNYMVNDSMGIIANAHTVFADKDPLKAMSEECIELAKLFSIA 886
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPA IPP L+ KEYPDFMEKLDK TY S VIG LFR VKD + + G I +FT
Sbjct: 887 VDFPKTGVPAVIPPQLYAKEYPDFMEKLDKPTYQSSNVIGALFREVKDIAPHEGSITSFT 946
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
+ +A++S D DMEVDGF DY+++A +K YDYKLG LM+ Y IKTEAEILSGS+M SK
Sbjct: 947 RRVAKRSCDPDMEVDGFEDYIEDAIYYKGNYDYKLGNLMEYYGIKTEAEILSGSVMSMSK 1006
Query: 452 SYNKYKDGEAVSKAVRSLRKQARGWFNEKSNVYNPNEDD--AKASAWYHVTYHPAYWGCY 279
S+ K +D ++V AVRSLRK+AR WFNEK + DD A ASAWYHVTYHP Y+G Y
Sbjct: 1007 SFTKRRDADSVRAAVRSLRKEARAWFNEKGTGLDSGADDVYANASAWYHVTYHPDYFGTY 1066
Query: 278 NEGCNWPHFLSFAWCVYDKLIVI 210
NEG N HF+SF WCVYDKL++I
Sbjct: 1067 NEGLNRDHFISFPWCVYDKLVLI 1089
>ref|XP_008389159.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Malus domestica]
Length = 1114
Score = 476 bits (1224), Expect = e-131
Identities = 228/323 (70%), Positives = 262/323 (81%), Gaps = 2/323 (0%)
Frame = -2
Query: 1172 AVDVPALRHMVDCVVFPQKGKRPHPNECSGSDLDGDVYFVTWDPELIPPREVPPMEYTPA 993
AVDVP L HMVDCVVFPQKG RPHPNECSGSDLDGD+Y+V WD ELIP +++ PM+YTPA
Sbjct: 769 AVDVPELYHMVDCVVFPQKGPRPHPNECSGSDLDGDIYYVCWDEELIPRKQIEPMDYTPA 828
Query: 992 PTETLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTVFADRGPLKAESNECIELAKLFSIA 813
PT LDHDVTIEEVEEYF NY+VNDSLGIIANAHTVFAD+ PLKA S ECIELAKLFSIA
Sbjct: 829 PTIELDHDVTIEEVEEYFVNYMVNDSLGIIANAHTVFADKDPLKAMSXECIELAKLFSIA 888
Query: 812 VDFPKTGVPAEIPPYLHVKEYPDFMEKLDKVTYVSEGVIGKLFRAVKDHSTNSGHIKAFT 633
VDFPKTGVPA IPP L+ KEYPDFMEKLDK TY S VIG LFR VKD + + I +FT
Sbjct: 889 VDFPKTGVPAVIPPXLYAKEYPDFMEKLDKPTYQSSNVIGALFREVKDIAPHESSITSFT 948
Query: 632 KEIARKSYDRDMEVDGFRDYLDEASIFKEEYDYKLGCLMDQYEIKTEAEILSGSIMRASK 453
+++A++SYD DM VDG DY+++A +K YDYKLG LM+ Y IKTEAEILSGS+MR SK
Sbjct: 949 RQVAKQSYDSDMXVDGXEDYIEDAIYYKGNYDYKLGNLMEYYGIKTEAEILSGSVMRMSK 1008
Query: 452 SYNKYKDGEAVSKAVRSLRKQARGWFNEKSNVYNPNEDD--AKASAWYHVTYHPAYWGCY 279
S+ K +D E+++ AVRSLRK+AR WFNEK + D AKASAWYHVTYHP Y+G Y
Sbjct: 1009 SFTKRRDAESINVAVRSLRKEARAWFNEKGTGLDSGADXVYAKASAWYHVTYHPDYFGTY 1068
Query: 278 NEGCNWPHFLSFAWCVYDKLIVI 210
NEG N HF+SF WCVYDKL++I
Sbjct: 1069 NEGLNRDHFISFPWCVYDKLVLI 1091