BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00015617
         (2123 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX94324.1| RNA polymerase beta subunit (chloroplast) [Anemar...  1068   0.0  
gb|AFB18336.1| RNA polymerase beta subunit, partial [Hesperaloe ...  1066   0.0  
gb|AAZ03996.1| RNA polymerase beta chain [Yucca schidigera]          1063   0.0  
gb|AEX94328.1| RNA polymerase beta subunit (chloroplast) [Manfre...  1063   0.0  
gb|AFB18337.1| RNA polymerase beta subunit, partial [Hosta ventr...  1061   0.0  
gb|AFB18321.1| RNA polymerase beta subunit [Albuca kirkii]           1061   0.0  
gb|AEX94351.1| RNA polymerase beta subunit (chloroplast) [Ornith...  1061   0.0  
ref|YP_009045558.1| RNA polymerase beta subunit (chloroplast) [C...  1061   0.0  
gb|AEX94349.1| RNA polymerase beta subunit (chloroplast) [Drimia...  1058   0.0  
gb|AEX94350.1| RNA polymerase beta subunit (chloroplast) [Ledebo...  1056   0.0  
gb|AEX94325.1| RNA polymerase beta subunit (chloroplast) [Camass...  1056   0.0  
gb|AEX94352.1| RNA polymerase beta subunit (chloroplast) [Oziroe...  1055   0.0  
gb|AEX94358.1| RNA polymerase beta subunit (chloroplast) [Eriosp...  1048   0.0  
gb|AEX94335.1| RNA polymerase beta subunit (chloroplast) [Crinum...  1054   0.0  
gb|AFB18348.1| RNA polymerase beta subunit, partial [Phormium te...  1054   0.0  
gb|AEX94347.1| RNA polymerase beta subunit (chloroplast) [Phormi...  1054   0.0  
gb|AFB18323.1| RNA polymerase beta subunit, partial [Asparagus o...  1053   0.0  
gb|AEX94339.1| RNA polymerase beta subunit (chloroplast) [Aspara...  1053   0.0  
gb|AFB18328.1| RNA polymerase beta subunit, partial [Chlorophytu...  1053   0.0  
gb|AEX94354.1| RNA polymerase beta subunit (chloroplast) [Cordyl...  1052   0.0  

>gb|AEX94324.1| RNA polymerase beta subunit (chloroplast) [Anemarrhena asphodeloides]
          Length = 1070

 Score = 1068 bits (2762), Expect = 0.0
 Identities = 545/587 (92%), Positives = 554/587 (94%)
 Frame = -1

Query: 1763 LSRLSSRALYRNIPCKLCS*HTLEQYIFVTTRSIGRCQIFLIRMKFGMGTLDDMNNLKNK 1584
            L R+  R + R +   +   +T     F+  R +      LI MKFGMG LDDMN+LKNK
Sbjct: 258  LGRIGRRNMNRRLNLDIPQNNT-----FLLPRDLLAAADHLIAMKFGMGILDDMNHLKNK 312

Query: 1583 CIGSVADLLQDQFRLALVHLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 1404
             I SVADLLQDQF LALV LENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH
Sbjct: 313  RIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 372

Query: 1403 PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRAASFRIRDIHPSHYGRICPIDTSEGINV 1224
            PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRAASFRIRDIHPSHYGRICPIDTSEGINV
Sbjct: 373  PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRAASFRIRDIHPSHYGRICPIDTSEGINV 432

Query: 1223 GLIGSLAIHVRIGHWGSIESPFYEISERSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 1044
            GLIGSLAIHVRIGHWGSIESPFYEISERSKRAQM+YLSPNRDEYYMVAAGNSLALNRGIQ
Sbjct: 433  GLIGSLAIHVRIGHWGSIESPFYEISERSKRAQMLYLSPNRDEYYMVAAGNSLALNRGIQ 492

Query: 1043 EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 864
            EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA
Sbjct: 493  EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 552

Query: 863  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 684
            VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ
Sbjct: 553  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 612

Query: 683  RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGELSLGKNVLVAYMPWEGYNFEDAVL 504
            RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGELSLGKNVLVAYMPWEGYN EDAVL
Sbjct: 613  RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGELSLGKNVLVAYMPWEGYNSEDAVL 672

Query: 503  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 324
            ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI
Sbjct: 673  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 732

Query: 323  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 144
            EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ
Sbjct: 733  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 792

Query: 143  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIVSKILSRQDM 3
            KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIVSKILSRQDM
Sbjct: 793  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIVSKILSRQDM 839


>gb|AFB18336.1| RNA polymerase beta subunit, partial [Hesperaloe parviflora]
          Length = 1077

 Score = 1066 bits (2758), Expect = 0.0
 Identities = 543/587 (92%), Positives = 554/587 (94%)
 Frame = -1

Query: 1763 LSRLSSRALYRNIPCKLCS*HTLEQYIFVTTRSIGRCQIFLIRMKFGMGTLDDMNNLKNK 1584
            L R+  R + R +   +   +T     F+  R +      LI MKFGMGTLDDMN+LKNK
Sbjct: 266  LGRIGRRNMNRRLNLDIPQNNT-----FLLPRDLLAAADHLIGMKFGMGTLDDMNHLKNK 320

Query: 1583 CIGSVADLLQDQFRLALVHLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 1404
             I SVADLLQDQF LALV LENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH
Sbjct: 321  RIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 380

Query: 1403 PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRAASFRIRDIHPSHYGRICPIDTSEGINV 1224
            PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGR ASFRIRDIHPSHYGRICPIDTSEGINV
Sbjct: 381  PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINV 440

Query: 1223 GLIGSLAIHVRIGHWGSIESPFYEISERSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 1044
            GLIGSLAIHVRIGHWGSIESPFYEISERSK+AQMIYLSPNRDEYYMVAAGNSLALNRGIQ
Sbjct: 441  GLIGSLAIHVRIGHWGSIESPFYEISERSKKAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 500

Query: 1043 EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 864
            EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA
Sbjct: 501  EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 560

Query: 863  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 684
            VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ
Sbjct: 561  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 620

Query: 683  RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGELSLGKNVLVAYMPWEGYNFEDAVL 504
            RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGEL+LGKNVLVAYMPWEGYN EDAVL
Sbjct: 621  RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGELALGKNVLVAYMPWEGYNSEDAVL 680

Query: 503  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 324
            ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI
Sbjct: 681  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 740

Query: 323  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 144
            EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ
Sbjct: 741  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 800

Query: 143  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIVSKILSRQDM 3
            KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGI+SKILSRQDM
Sbjct: 801  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIISKILSRQDM 847


>gb|AAZ03996.1| RNA polymerase beta chain [Yucca schidigera]
          Length = 1069

 Score = 1063 bits (2750), Expect = 0.0
 Identities = 542/587 (92%), Positives = 553/587 (94%)
 Frame = -1

Query: 1763 LSRLSSRALYRNIPCKLCS*HTLEQYIFVTTRSIGRCQIFLIRMKFGMGTLDDMNNLKNK 1584
            L R+  R + R +   +   +T     F+  R +      LI MKFGMGTLDDMN+LKNK
Sbjct: 258  LGRIGRRNMNRRLNLDIPQNNT-----FLLPRDLLAAADHLIGMKFGMGTLDDMNHLKNK 312

Query: 1583 CIGSVADLLQDQFRLALVHLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 1404
             I SVADLLQDQF LALV LENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH
Sbjct: 313  RIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 372

Query: 1403 PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRAASFRIRDIHPSHYGRICPIDTSEGINV 1224
            PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGR ASFRIRDIHPSHYGRICPIDTSEGINV
Sbjct: 373  PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINV 432

Query: 1223 GLIGSLAIHVRIGHWGSIESPFYEISERSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 1044
            GLIGSLAIHVRIGHWGSIESPFYEISERSK+AQMIYLSPNRDEYYMVAAGNSLALNRGIQ
Sbjct: 433  GLIGSLAIHVRIGHWGSIESPFYEISERSKKAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 492

Query: 1043 EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 864
            EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA
Sbjct: 493  EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 552

Query: 863  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 684
            VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ
Sbjct: 553  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 612

Query: 683  RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGELSLGKNVLVAYMPWEGYNFEDAVL 504
            RSNKNTCMHQKPQV QGKCIKKGQILADGAATVGGEL+LGKNVLVAYMPWEGYN EDAVL
Sbjct: 613  RSNKNTCMHQKPQVQQGKCIKKGQILADGAATVGGELALGKNVLVAYMPWEGYNSEDAVL 672

Query: 503  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 324
            ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI
Sbjct: 673  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 732

Query: 323  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 144
            EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ
Sbjct: 733  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 792

Query: 143  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIVSKILSRQDM 3
            KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGI+SKILSRQDM
Sbjct: 793  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIISKILSRQDM 839


>gb|AEX94328.1| RNA polymerase beta subunit (chloroplast) [Manfreda virginica]
            gi|372481308|gb|AEX94329.1| RNA polymerase beta subunit
            (chloroplast) [Polianthes sp. Pires 2011-05]
          Length = 1068

 Score = 1063 bits (2750), Expect = 0.0
 Identities = 542/587 (92%), Positives = 553/587 (94%)
 Frame = -1

Query: 1763 LSRLSSRALYRNIPCKLCS*HTLEQYIFVTTRSIGRCQIFLIRMKFGMGTLDDMNNLKNK 1584
            L R+  R + R +   +   +T     F+  R +      LI MKFGMGTLDDMN+LKNK
Sbjct: 256  LGRIGRRNMNRRLNLDIPQNNT-----FLLPRDLLAAADHLIGMKFGMGTLDDMNHLKNK 310

Query: 1583 CIGSVADLLQDQFRLALVHLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 1404
             I SVADLLQDQF LALV LENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH
Sbjct: 311  RIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 370

Query: 1403 PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRAASFRIRDIHPSHYGRICPIDTSEGINV 1224
            PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGR ASFRIRDIHPSHYGRICPIDTSEGINV
Sbjct: 371  PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINV 430

Query: 1223 GLIGSLAIHVRIGHWGSIESPFYEISERSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 1044
            GLIGSLAIHVRIGHWGSIESPFYEISERSK+AQMIYLSPNRDEYYMVAAGNSLALNRGIQ
Sbjct: 431  GLIGSLAIHVRIGHWGSIESPFYEISERSKKAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 490

Query: 1043 EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 864
            EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA
Sbjct: 491  EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 550

Query: 863  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 684
            VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ
Sbjct: 551  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 610

Query: 683  RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGELSLGKNVLVAYMPWEGYNFEDAVL 504
            RSNKNTCMHQKPQV QGKCIKKGQILADGAATVGGEL+LGKNVLVAYMPWEGYN EDAVL
Sbjct: 611  RSNKNTCMHQKPQVQQGKCIKKGQILADGAATVGGELALGKNVLVAYMPWEGYNSEDAVL 670

Query: 503  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 324
            ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI
Sbjct: 671  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 730

Query: 323  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 144
            EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ
Sbjct: 731  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 790

Query: 143  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIVSKILSRQDM 3
            KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGI+SKILSRQDM
Sbjct: 791  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIISKILSRQDM 837


>gb|AFB18337.1| RNA polymerase beta subunit, partial [Hosta ventricosa]
          Length = 1077

 Score = 1061 bits (2745), Expect = 0.0
 Identities = 541/587 (92%), Positives = 553/587 (94%)
 Frame = -1

Query: 1763 LSRLSSRALYRNIPCKLCS*HTLEQYIFVTTRSIGRCQIFLIRMKFGMGTLDDMNNLKNK 1584
            L R+  R + R +   +   +T     F+  R +      LI MKFGMGTLDDMN+LKNK
Sbjct: 266  LGRIGRRNMNRRLNLDIPQNNT-----FLLPRDLLAAADHLIGMKFGMGTLDDMNHLKNK 320

Query: 1583 CIGSVADLLQDQFRLALVHLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 1404
             I SVADLLQDQF LALV LENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH
Sbjct: 321  RIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 380

Query: 1403 PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRAASFRIRDIHPSHYGRICPIDTSEGINV 1224
            PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGR ASFRIRDIHPSHYGRICPIDTSEGINV
Sbjct: 381  PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINV 440

Query: 1223 GLIGSLAIHVRIGHWGSIESPFYEISERSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 1044
            GLIGSLAIHVRIGHWGSIESPFYEISERSK+AQMIYLSPNRDEYYMVAAGNSLALNRGIQ
Sbjct: 441  GLIGSLAIHVRIGHWGSIESPFYEISERSKKAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 500

Query: 1043 EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 864
            EEQVVPARYRQEFLTIAWEQI+FRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA
Sbjct: 501  EEQVVPARYRQEFLTIAWEQINFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 560

Query: 863  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 684
            VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ
Sbjct: 561  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 620

Query: 683  RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGELSLGKNVLVAYMPWEGYNFEDAVL 504
            RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGEL+LGKNVLVAYMPWEGYN EDAVL
Sbjct: 621  RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGELALGKNVLVAYMPWEGYNSEDAVL 680

Query: 503  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 324
            ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI
Sbjct: 681  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 740

Query: 323  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 144
            EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ
Sbjct: 741  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 800

Query: 143  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIVSKILSRQDM 3
            KKGGSSYNPERIRVYI QKREIKVGDKVAGRHGNKGI+SKILSRQDM
Sbjct: 801  KKGGSSYNPERIRVYILQKREIKVGDKVAGRHGNKGIISKILSRQDM 847


>gb|AFB18321.1| RNA polymerase beta subunit [Albuca kirkii]
          Length = 1070

 Score = 1061 bits (2745), Expect = 0.0
 Identities = 539/587 (91%), Positives = 553/587 (94%)
 Frame = -1

Query: 1763 LSRLSSRALYRNIPCKLCS*HTLEQYIFVTTRSIGRCQIFLIRMKFGMGTLDDMNNLKNK 1584
            L R+  R + R +   +   +T     F+  R +      LI MKFGMGTLDDMN+LKNK
Sbjct: 258  LGRIGRRNMNRRLNLDIPQNNT-----FLLPRDLLAAADHLIGMKFGMGTLDDMNHLKNK 312

Query: 1583 CIGSVADLLQDQFRLALVHLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 1404
             I SVADLLQDQF LALV LENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH
Sbjct: 313  RIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 372

Query: 1403 PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRAASFRIRDIHPSHYGRICPIDTSEGINV 1224
            PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGR ASFRIRDIHPSHYGRICPIDTSEGINV
Sbjct: 373  PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINV 432

Query: 1223 GLIGSLAIHVRIGHWGSIESPFYEISERSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 1044
            GLIGSLAIHVRIG+WGSIESPFYEISERSK+AQM+YLSPNRDEYYMVAAGNSLALNRGIQ
Sbjct: 433  GLIGSLAIHVRIGYWGSIESPFYEISERSKKAQMVYLSPNRDEYYMVAAGNSLALNRGIQ 492

Query: 1043 EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 864
            EEQVVPARYRQEFLTIAWEQ+HFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA
Sbjct: 493  EEQVVPARYRQEFLTIAWEQVHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 552

Query: 863  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 684
            VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKI FSSNGDTISIPLVMYQ
Sbjct: 553  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIFFSSNGDTISIPLVMYQ 612

Query: 683  RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGELSLGKNVLVAYMPWEGYNFEDAVL 504
            RSNKNTCMHQKPQV QGKCIKKGQILADGAATVGGEL+LGKNVLVAYMPWEGYNFEDAVL
Sbjct: 613  RSNKNTCMHQKPQVRQGKCIKKGQILADGAATVGGELALGKNVLVAYMPWEGYNFEDAVL 672

Query: 503  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 324
            ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI
Sbjct: 673  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 732

Query: 323  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 144
            EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ
Sbjct: 733  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 792

Query: 143  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIVSKILSRQDM 3
            KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGI+SKILSRQDM
Sbjct: 793  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIISKILSRQDM 839


>gb|AEX94351.1| RNA polymerase beta subunit (chloroplast) [Ornithogalum tenuifolium]
          Length = 1070

 Score = 1061 bits (2745), Expect = 0.0
 Identities = 539/587 (91%), Positives = 553/587 (94%)
 Frame = -1

Query: 1763 LSRLSSRALYRNIPCKLCS*HTLEQYIFVTTRSIGRCQIFLIRMKFGMGTLDDMNNLKNK 1584
            L R+  R + R +   +   +T     F+  R +      LI MKFGMGTLDDMN+LKNK
Sbjct: 258  LGRIGRRNMNRRLNLDIPQNNT-----FLLPRDLLAAADHLIGMKFGMGTLDDMNHLKNK 312

Query: 1583 CIGSVADLLQDQFRLALVHLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 1404
             I SVADLLQDQF LALV LENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH
Sbjct: 313  RIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 372

Query: 1403 PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRAASFRIRDIHPSHYGRICPIDTSEGINV 1224
            PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGR ASFRIRDIHPSHYGRICPIDTSEGINV
Sbjct: 373  PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINV 432

Query: 1223 GLIGSLAIHVRIGHWGSIESPFYEISERSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 1044
            GLIGSLAIHVRIG+WGSIESPFYEISERSK+AQM+YLSPNRDEYYMVAAGNSLALNRGIQ
Sbjct: 433  GLIGSLAIHVRIGYWGSIESPFYEISERSKKAQMVYLSPNRDEYYMVAAGNSLALNRGIQ 492

Query: 1043 EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 864
            EEQVVPARYRQEFLTIAWEQ+HFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA
Sbjct: 493  EEQVVPARYRQEFLTIAWEQVHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 552

Query: 863  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 684
            VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKI FSSNGDTISIPLVMYQ
Sbjct: 553  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIFFSSNGDTISIPLVMYQ 612

Query: 683  RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGELSLGKNVLVAYMPWEGYNFEDAVL 504
            RSNKNTCMHQKPQV QGKCIKKGQILADGAATVGGEL+LGKNVLVAYMPWEGYNFEDAVL
Sbjct: 613  RSNKNTCMHQKPQVRQGKCIKKGQILADGAATVGGELALGKNVLVAYMPWEGYNFEDAVL 672

Query: 503  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 324
            ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI
Sbjct: 673  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 732

Query: 323  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 144
            EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ
Sbjct: 733  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 792

Query: 143  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIVSKILSRQDM 3
            KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGI+SKILSRQDM
Sbjct: 793  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIISKILSRQDM 839


>ref|YP_009045558.1| RNA polymerase beta subunit (chloroplast) [Cypripedium macranthos]
            gi|372481304|gb|AEX94327.1| RNA polymerase beta subunit
            (chloroplast) [Hosta ventricosa]
            gi|578888858|gb|AHI16741.1| RNA polymerase beta subunit
            (chloroplast) (chloroplast) [Cypripedium macranthos]
          Length = 1070

 Score = 1061 bits (2745), Expect = 0.0
 Identities = 541/587 (92%), Positives = 553/587 (94%)
 Frame = -1

Query: 1763 LSRLSSRALYRNIPCKLCS*HTLEQYIFVTTRSIGRCQIFLIRMKFGMGTLDDMNNLKNK 1584
            L R+  R + R +   +   +T     F+  R +      LI MKFGMGTLDDMN+LKNK
Sbjct: 258  LGRIGRRNMNRRLNLDIPQNNT-----FLLPRDLLAAADHLIGMKFGMGTLDDMNHLKNK 312

Query: 1583 CIGSVADLLQDQFRLALVHLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 1404
             I SVADLLQDQF LALV LENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH
Sbjct: 313  RIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 372

Query: 1403 PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRAASFRIRDIHPSHYGRICPIDTSEGINV 1224
            PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGR ASFRIRDIHPSHYGRICPIDTSEGINV
Sbjct: 373  PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINV 432

Query: 1223 GLIGSLAIHVRIGHWGSIESPFYEISERSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 1044
            GLIGSLAIHVRIGHWGSIESPFYEISERSK+AQMIYLSPNRDEYYMVAAGNSLALNRGIQ
Sbjct: 433  GLIGSLAIHVRIGHWGSIESPFYEISERSKKAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 492

Query: 1043 EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 864
            EEQVVPARYRQEFLTIAWEQI+FRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA
Sbjct: 493  EEQVVPARYRQEFLTIAWEQINFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 552

Query: 863  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 684
            VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ
Sbjct: 553  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 612

Query: 683  RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGELSLGKNVLVAYMPWEGYNFEDAVL 504
            RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGEL+LGKNVLVAYMPWEGYN EDAVL
Sbjct: 613  RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGELALGKNVLVAYMPWEGYNSEDAVL 672

Query: 503  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 324
            ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI
Sbjct: 673  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 732

Query: 323  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 144
            EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ
Sbjct: 733  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 792

Query: 143  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIVSKILSRQDM 3
            KKGGSSYNPERIRVYI QKREIKVGDKVAGRHGNKGI+SKILSRQDM
Sbjct: 793  KKGGSSYNPERIRVYILQKREIKVGDKVAGRHGNKGIISKILSRQDM 839


>gb|AEX94349.1| RNA polymerase beta subunit (chloroplast) [Drimia altissima]
          Length = 1070

 Score = 1058 bits (2735), Expect = 0.0
 Identities = 538/587 (91%), Positives = 552/587 (94%)
 Frame = -1

Query: 1763 LSRLSSRALYRNIPCKLCS*HTLEQYIFVTTRSIGRCQIFLIRMKFGMGTLDDMNNLKNK 1584
            L R+  R + R +   +   +T     F+  R +      LI MKFGMGTLDDMN+LKNK
Sbjct: 258  LGRIGRRNMNRRLNLDIPQNNT-----FLLPRDLLAAADHLIGMKFGMGTLDDMNHLKNK 312

Query: 1583 CIGSVADLLQDQFRLALVHLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 1404
             I SVADLLQDQF LALV LENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH
Sbjct: 313  RIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 372

Query: 1403 PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRAASFRIRDIHPSHYGRICPIDTSEGINV 1224
            PLSQVLDRTNPLTQIVHG KLSYLGPGGLTGR ASFRIRDIHPSHYGRICPIDTSEGINV
Sbjct: 373  PLSQVLDRTNPLTQIVHGLKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINV 432

Query: 1223 GLIGSLAIHVRIGHWGSIESPFYEISERSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 1044
            GLIGSLAIHVRIG+WGSIESPFYEISERSK+AQMIYLSPNRDEYYMVAAGNSLALNRGIQ
Sbjct: 433  GLIGSLAIHVRIGYWGSIESPFYEISERSKKAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 492

Query: 1043 EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 864
            EEQVVPARYRQEFLTIAWEQ+HFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA
Sbjct: 493  EEQVVPARYRQEFLTIAWEQVHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 552

Query: 863  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 684
            VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKI FSSNGDTISIPLVMYQ
Sbjct: 553  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIFFSSNGDTISIPLVMYQ 612

Query: 683  RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGELSLGKNVLVAYMPWEGYNFEDAVL 504
            RSNKNTCMHQKPQV QGKCIKKGQILADGAATVGGEL+LGKNVLVAYMPWEGYNFEDAVL
Sbjct: 613  RSNKNTCMHQKPQVRQGKCIKKGQILADGAATVGGELALGKNVLVAYMPWEGYNFEDAVL 672

Query: 503  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 324
            ISERLVYEDIYTSFHIRKYEI+THVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI
Sbjct: 673  ISERLVYEDIYTSFHIRKYEIKTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 732

Query: 323  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 144
            EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ
Sbjct: 733  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 792

Query: 143  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIVSKILSRQDM 3
            KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGI+SKILSRQDM
Sbjct: 793  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIISKILSRQDM 839


>gb|AEX94350.1| RNA polymerase beta subunit (chloroplast) [Ledebouria cordifolia]
          Length = 1070

 Score = 1056 bits (2732), Expect = 0.0
 Identities = 536/560 (95%), Positives = 541/560 (96%)
 Frame = -1

Query: 1682 FVTTRSIGRCQIFLIRMKFGMGTLDDMNNLKNKCIGSVADLLQDQFRLALVHLENAIRGT 1503
            F+  R +      LI MKFGMGTLDDMN+LKNK I SVADLLQDQF LALV LENAIRGT
Sbjct: 280  FLLPRDLLAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGT 339

Query: 1502 ICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPG 1323
            ICGAIRHKLIPTPQNLVTS SLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPG
Sbjct: 340  ICGAIRHKLIPTPQNLVTSISLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPG 399

Query: 1322 GLTGRAASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISE 1143
            GLTGR ASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIG WGSIESPFYEISE
Sbjct: 400  GLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGLWGSIESPFYEISE 459

Query: 1142 RSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQIHFRSIF 963
            RSK+AQMIYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQIHFRSIF
Sbjct: 460  RSKKAQMIYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQIHFRSIF 519

Query: 962  PFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVSV 783
            PFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVSV
Sbjct: 520  PFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVSV 579

Query: 782  IAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQRSNKNTCMHQKPQVPQGKCIKKGQILA 603
            IAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQRSNKNTCMHQKPQV QGKCIKKGQILA
Sbjct: 580  IAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQRSNKNTCMHQKPQVRQGKCIKKGQILA 639

Query: 602  DGAATVGGELSLGKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTS 423
            DGAATVGGEL+LGKNVLVAYMPWEGYN EDAVLISERLVYEDIYTSFHIRKYEIQTHVTS
Sbjct: 640  DGAATVGGELTLGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTS 699

Query: 422  QGPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLL 243
            QGPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLL
Sbjct: 700  QGPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLL 759

Query: 242  RAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDK 63
            RAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDK
Sbjct: 760  RAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDK 819

Query: 62   VAGRHGNKGIVSKILSRQDM 3
            VAGRHGNKGIVSKILSRQDM
Sbjct: 820  VAGRHGNKGIVSKILSRQDM 839


>gb|AEX94325.1| RNA polymerase beta subunit (chloroplast) [Camassia scilloides]
          Length = 1070

 Score = 1056 bits (2731), Expect = 0.0
 Identities = 538/587 (91%), Positives = 550/587 (93%)
 Frame = -1

Query: 1763 LSRLSSRALYRNIPCKLCS*HTLEQYIFVTTRSIGRCQIFLIRMKFGMGTLDDMNNLKNK 1584
            L R+  R + R +   +   +T     F+  R +      LI MKFGMGTLDDMN+LKNK
Sbjct: 258  LGRIGRRNMNRRLNLDIPQNNT-----FLLPRDLLAAADHLIGMKFGMGTLDDMNHLKNK 312

Query: 1583 CIGSVADLLQDQFRLALVHLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 1404
             I SVADLLQDQF LALV LENAIRGTICGAIRHKLIPT QNLVTSTSLTTTYESFFGLH
Sbjct: 313  RIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPTSQNLVTSTSLTTTYESFFGLH 372

Query: 1403 PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRAASFRIRDIHPSHYGRICPIDTSEGINV 1224
            PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGR ASFRIRDIHPSHYGRICPIDTSEGINV
Sbjct: 373  PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINV 432

Query: 1223 GLIGSLAIHVRIGHWGSIESPFYEISERSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 1044
            GLIGSLAIHVRIGHWGSIESPFYEISERSK+AQMIYLSPNRDEYYMVAAGNSLALNRGIQ
Sbjct: 433  GLIGSLAIHVRIGHWGSIESPFYEISERSKKAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 492

Query: 1043 EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 864
            EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA
Sbjct: 493  EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 552

Query: 863  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 684
            VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ
Sbjct: 553  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 612

Query: 683  RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGELSLGKNVLVAYMPWEGYNFEDAVL 504
            RSNKNTCMHQKPQV QGKCIKKGQILADGAATVGGEL+LGKNVLVAYMPWEGYN EDAVL
Sbjct: 613  RSNKNTCMHQKPQVQQGKCIKKGQILADGAATVGGELALGKNVLVAYMPWEGYNSEDAVL 672

Query: 503  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 324
            ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI
Sbjct: 673  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 732

Query: 323  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 144
            EAGDILVGKLTPQ ANESSYAPED+LLR ILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ
Sbjct: 733  EAGDILVGKLTPQGANESSYAPEDKLLRVILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 792

Query: 143  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIVSKILSRQDM 3
            KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGI+SKILSRQDM
Sbjct: 793  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIISKILSRQDM 839


>gb|AEX94352.1| RNA polymerase beta subunit (chloroplast) [Oziroe biflora]
          Length = 1070

 Score = 1055 bits (2727), Expect = 0.0
 Identities = 533/560 (95%), Positives = 540/560 (96%)
 Frame = -1

Query: 1682 FVTTRSIGRCQIFLIRMKFGMGTLDDMNNLKNKCIGSVADLLQDQFRLALVHLENAIRGT 1503
            F+  R +      LI MKFGMGTLDDMN+LKNK I SVADLLQDQF LALV LENAIRGT
Sbjct: 280  FLLPRDLLSAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGT 339

Query: 1502 ICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPG 1323
            ICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPG
Sbjct: 340  ICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPG 399

Query: 1322 GLTGRAASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISE 1143
            GLTGR ASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIG WGSIESPFYEISE
Sbjct: 400  GLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGRWGSIESPFYEISE 459

Query: 1142 RSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQIHFRSIF 963
            RSK+AQMIYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQIHFRSIF
Sbjct: 460  RSKKAQMIYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQIHFRSIF 519

Query: 962  PFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVSV 783
            PFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPL RSEKCIVGTGLERQTALDSGVSV
Sbjct: 520  PFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLFRSEKCIVGTGLERQTALDSGVSV 579

Query: 782  IAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQRSNKNTCMHQKPQVPQGKCIKKGQILA 603
            IAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQRSNKNTCMHQKPQV QGKCIKKGQILA
Sbjct: 580  IAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQRSNKNTCMHQKPQVRQGKCIKKGQILA 639

Query: 602  DGAATVGGELSLGKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTS 423
            DGAATVGGEL+LGKNVLVAYMPWEGYN EDAVLISERLVYEDIYTSFHIRKYEIQTH+TS
Sbjct: 640  DGAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHMTS 699

Query: 422  QGPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLL 243
            QGPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQA NESSYAPEDRLL
Sbjct: 700  QGPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAVNESSYAPEDRLL 759

Query: 242  RAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDK 63
            RAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDK
Sbjct: 760  RAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDK 819

Query: 62   VAGRHGNKGIVSKILSRQDM 3
            VAGRHGNKGI+SKILSRQDM
Sbjct: 820  VAGRHGNKGIISKILSRQDM 839


>gb|AEX94358.1| RNA polymerase beta subunit (chloroplast) [Eriospermum cervicorne]
          Length = 1070

 Score = 1048 bits (2710), Expect(2) = 0.0
 Identities = 528/547 (96%), Positives = 534/547 (97%)
 Frame = -1

Query: 1643 LIRMKFGMGTLDDMNNLKNKCIGSVADLLQDQFRLALVHLENAIRGTICGAIRHKLIPTP 1464
            LI MKFGMGTLDDMN+LKNK I SVADLLQDQF LALV LENAIRGTICGAIRHKLIPTP
Sbjct: 293  LIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPTP 352

Query: 1463 QNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRAASFRIRD 1284
            QNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGR ASFRIRD
Sbjct: 353  QNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRD 412

Query: 1283 IHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKRAQMIYLSPN 1104
            IHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSK A+MIYLSPN
Sbjct: 413  IHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEARMIYLSPN 472

Query: 1103 RDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIP 924
            RDEYYMVAAGNSLALNRGIQEEQ VPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIP
Sbjct: 473  RDEYYMVAAGNSLALNRGIQEEQAVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIP 532

Query: 923  FIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDT 744
            FIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDT
Sbjct: 533  FIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDT 592

Query: 743  HKIIFSSNGDTISIPLVMYQRSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGELSLG 564
            HKIIFSSNGDTISI LVMYQRSNKNTCMHQKPQV QGK IKKGQILADG ATVGGEL+LG
Sbjct: 593  HKIIFSSNGDTISISLVMYQRSNKNTCMHQKPQVRQGKSIKKGQILADGVATVGGELALG 652

Query: 563  KNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHL 384
            KN+LVAYMPWEGYN EDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHL
Sbjct: 653  KNLLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHL 712

Query: 383  EAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKE 204
            EAHLLRNLDRNGIVMLGSW+EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKE
Sbjct: 713  EAHLLRNLDRNGIVMLGSWVEAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKE 772

Query: 203  TSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIVSK 24
            TSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGI+SK
Sbjct: 773  TSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIISK 832

Query: 23   ILSRQDM 3
            ILSRQDM
Sbjct: 833  ILSRQDM 839



 Score = 30.4 bits (67), Expect(2) = 0.0
 Identities = 15/19 (78%), Positives = 15/19 (78%)
 Frame = -2

Query: 1708 LDIR*NNIFLLPQDLLAGA 1652
            LDI  NN FLLPQDLLA A
Sbjct: 272  LDIPQNNTFLLPQDLLAAA 290


>gb|AEX94335.1| RNA polymerase beta subunit (chloroplast) [Crinum asiaticum]
          Length = 1070

 Score = 1054 bits (2726), Expect = 0.0
 Identities = 532/561 (94%), Positives = 540/561 (96%)
 Frame = -1

Query: 1685 IFVTTRSIGRCQIFLIRMKFGMGTLDDMNNLKNKCIGSVADLLQDQFRLALVHLENAIRG 1506
            IF+  R +      LI MKFGMGTLDDMN+LKNK I SVADLLQDQF LAL  LENAIRG
Sbjct: 279  IFLLPRDLLAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALARLENAIRG 338

Query: 1505 TICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGP 1326
            TICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGP
Sbjct: 339  TICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGP 398

Query: 1325 GGLTGRAASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEIS 1146
            GGLTGR ASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEIS
Sbjct: 399  GGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEIS 458

Query: 1145 ERSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQIHFRSI 966
            ERSK AQ+ YLSPNRDEYYMVAAGNSLALNRG+QEEQVVPARYRQEFLTIAWEQIHFRSI
Sbjct: 459  ERSKEAQIFYLSPNRDEYYMVAAGNSLALNRGVQEEQVVPARYRQEFLTIAWEQIHFRSI 518

Query: 965  FPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVS 786
            FPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVS
Sbjct: 519  FPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVS 578

Query: 785  VIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQRSNKNTCMHQKPQVPQGKCIKKGQIL 606
            VIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQRSNKNTCMHQKPQV QGKCIKKGQIL
Sbjct: 579  VIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQRSNKNTCMHQKPQVRQGKCIKKGQIL 638

Query: 605  ADGAATVGGELSLGKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVT 426
            ADGAATVGGEL+LGKNVLVAYMPWEGYN EDAVLISERLVYEDIYTSFHIRKYEIQTHVT
Sbjct: 639  ADGAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVT 698

Query: 425  SQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRL 246
            SQGPERITKEIPHLEAHLL+NLDRNGIV+LGSWIEAGDILVGKLTPQ ANESSYAPEDRL
Sbjct: 699  SQGPERITKEIPHLEAHLLQNLDRNGIVILGSWIEAGDILVGKLTPQTANESSYAPEDRL 758

Query: 245  LRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGD 66
            LRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGD
Sbjct: 759  LRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGD 818

Query: 65   KVAGRHGNKGIVSKILSRQDM 3
            KVAGRHGNKGIVSKILSRQDM
Sbjct: 819  KVAGRHGNKGIVSKILSRQDM 839


>gb|AFB18348.1| RNA polymerase beta subunit, partial [Phormium tenax]
          Length = 1074

 Score = 1054 bits (2725), Expect = 0.0
 Identities = 536/587 (91%), Positives = 551/587 (93%)
 Frame = -1

Query: 1763 LSRLSSRALYRNIPCKLCS*HTLEQYIFVTTRSIGRCQIFLIRMKFGMGTLDDMNNLKNK 1584
            L R+  R + R +   +   +T     F+  R +      LI MKFGMGTLDDMN+LKNK
Sbjct: 263  LGRIGRRNMNRRLNLDIPQNNT-----FLLPRDLLAAADHLIGMKFGMGTLDDMNHLKNK 317

Query: 1583 CIGSVADLLQDQFRLALVHLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 1404
             I SVADLLQDQF LALV LENAIRGTICGAIRHKLIPTPQ LVTSTSLTTTYESFFGLH
Sbjct: 318  RIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPTPQTLVTSTSLTTTYESFFGLH 377

Query: 1403 PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRAASFRIRDIHPSHYGRICPIDTSEGINV 1224
            PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGR ASFRIRDIHPSHYGRICPIDTSEGINV
Sbjct: 378  PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINV 437

Query: 1223 GLIGSLAIHVRIGHWGSIESPFYEISERSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 1044
            GLIGSLAIHVRIGHWGSIESPFYEISERSK AQ+IYLSPN+DEYYMVAAGNSLALNRGIQ
Sbjct: 438  GLIGSLAIHVRIGHWGSIESPFYEISERSKEAQIIYLSPNKDEYYMVAAGNSLALNRGIQ 497

Query: 1043 EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 864
            EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA
Sbjct: 498  EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 557

Query: 863  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 684
            VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDT KIIFSSNGDTISIPLVMYQ
Sbjct: 558  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTQKIIFSSNGDTISIPLVMYQ 617

Query: 683  RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGELSLGKNVLVAYMPWEGYNFEDAVL 504
            RSNKNTCMHQKPQ+ QGKCIKKGQILADGAATVGGEL+LGKNVLVAYMPWEGYNFEDAVL
Sbjct: 618  RSNKNTCMHQKPQLQQGKCIKKGQILADGAATVGGELALGKNVLVAYMPWEGYNFEDAVL 677

Query: 503  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 324
            ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIV+LGSWI
Sbjct: 678  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVILGSWI 737

Query: 323  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 144
            EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ
Sbjct: 738  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 797

Query: 143  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIVSKILSRQDM 3
            KKGGSSYNPE+IRVYISQKREIKVGDKVAGRHGNKGI+SKILSRQDM
Sbjct: 798  KKGGSSYNPEKIRVYISQKREIKVGDKVAGRHGNKGIISKILSRQDM 844


>gb|AEX94347.1| RNA polymerase beta subunit (chloroplast) [Phormium tenax]
          Length = 1070

 Score = 1054 bits (2725), Expect = 0.0
 Identities = 536/587 (91%), Positives = 551/587 (93%)
 Frame = -1

Query: 1763 LSRLSSRALYRNIPCKLCS*HTLEQYIFVTTRSIGRCQIFLIRMKFGMGTLDDMNNLKNK 1584
            L R+  R + R +   +   +T     F+  R +      LI MKFGMGTLDDMN+LKNK
Sbjct: 258  LGRIGRRNMNRRLNLDIPQNNT-----FLLPRDLLAAADHLIGMKFGMGTLDDMNHLKNK 312

Query: 1583 CIGSVADLLQDQFRLALVHLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 1404
             I SVADLLQDQF LALV LENAIRGTICGAIRHKLIPTPQ LVTSTSLTTTYESFFGLH
Sbjct: 313  RIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPTPQTLVTSTSLTTTYESFFGLH 372

Query: 1403 PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRAASFRIRDIHPSHYGRICPIDTSEGINV 1224
            PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGR ASFRIRDIHPSHYGRICPIDTSEGINV
Sbjct: 373  PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINV 432

Query: 1223 GLIGSLAIHVRIGHWGSIESPFYEISERSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 1044
            GLIGSLAIHVRIGHWGSIESPFYEISERSK AQ+IYLSPN+DEYYMVAAGNSLALNRGIQ
Sbjct: 433  GLIGSLAIHVRIGHWGSIESPFYEISERSKEAQIIYLSPNKDEYYMVAAGNSLALNRGIQ 492

Query: 1043 EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 864
            EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA
Sbjct: 493  EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 552

Query: 863  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 684
            VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDT KIIFSSNGDTISIPLVMYQ
Sbjct: 553  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTQKIIFSSNGDTISIPLVMYQ 612

Query: 683  RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGELSLGKNVLVAYMPWEGYNFEDAVL 504
            RSNKNTCMHQKPQ+ QGKCIKKGQILADGAATVGGEL+LGKNVLVAYMPWEGYNFEDAVL
Sbjct: 613  RSNKNTCMHQKPQLQQGKCIKKGQILADGAATVGGELALGKNVLVAYMPWEGYNFEDAVL 672

Query: 503  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 324
            ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIV+LGSWI
Sbjct: 673  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVILGSWI 732

Query: 323  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 144
            EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ
Sbjct: 733  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 792

Query: 143  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIVSKILSRQDM 3
            KKGGSSYNPE+IRVYISQKREIKVGDKVAGRHGNKGI+SKILSRQDM
Sbjct: 793  KKGGSSYNPEKIRVYISQKREIKVGDKVAGRHGNKGIISKILSRQDM 839


>gb|AFB18323.1| RNA polymerase beta subunit, partial [Asparagus officinalis]
          Length = 1072

 Score = 1053 bits (2724), Expect = 0.0
 Identities = 532/560 (95%), Positives = 540/560 (96%)
 Frame = -1

Query: 1682 FVTTRSIGRCQIFLIRMKFGMGTLDDMNNLKNKCIGSVADLLQDQFRLALVHLENAIRGT 1503
            F+  R +      LI MKFGMGTLDDMN+LKNK I SVADLLQDQF LALV LENAIRGT
Sbjct: 283  FLLPRDLLAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGT 342

Query: 1502 ICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPG 1323
            ICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPG
Sbjct: 343  ICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPG 402

Query: 1322 GLTGRAASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISE 1143
            GLTGR ASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHV+IGHWGSIESPFYEISE
Sbjct: 403  GLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHVKIGHWGSIESPFYEISE 462

Query: 1142 RSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQIHFRSIF 963
            RSK A+MIYLSPNRDEYYMVAAGNSLALNRGIQEEQ VPARYRQEFLTIAWEQIHFRSIF
Sbjct: 463  RSKEARMIYLSPNRDEYYMVAAGNSLALNRGIQEEQAVPARYRQEFLTIAWEQIHFRSIF 522

Query: 962  PFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVSV 783
            PFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVSV
Sbjct: 523  PFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVSV 582

Query: 782  IAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQRSNKNTCMHQKPQVPQGKCIKKGQILA 603
            IAEREGKIIYTDTHKIIFSS+GDTISIPLVMYQRSNKNTCMHQKPQV QGKCIKKGQILA
Sbjct: 583  IAEREGKIIYTDTHKIIFSSDGDTISIPLVMYQRSNKNTCMHQKPQVRQGKCIKKGQILA 642

Query: 602  DGAATVGGELSLGKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTS 423
            DGAATVGGEL+LGKNVLVAYMPWEGYN EDAVLISERLVYEDIYTSFHIRKYEIQTHVTS
Sbjct: 643  DGAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTS 702

Query: 422  QGPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLL 243
            QGPERITKEIPHLEAHLLRNLDR GIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLL
Sbjct: 703  QGPERITKEIPHLEAHLLRNLDRTGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLL 762

Query: 242  RAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDK 63
            RAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDK
Sbjct: 763  RAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDK 822

Query: 62   VAGRHGNKGIVSKILSRQDM 3
            VAGRHGNKGI+SKILSRQDM
Sbjct: 823  VAGRHGNKGIISKILSRQDM 842


>gb|AEX94339.1| RNA polymerase beta subunit (chloroplast) [Asparagus officinalis]
            gi|372481330|gb|AEX94340.1| RNA polymerase beta subunit
            (chloroplast) [Asparagus asparagoides]
          Length = 1070

 Score = 1053 bits (2724), Expect = 0.0
 Identities = 532/560 (95%), Positives = 540/560 (96%)
 Frame = -1

Query: 1682 FVTTRSIGRCQIFLIRMKFGMGTLDDMNNLKNKCIGSVADLLQDQFRLALVHLENAIRGT 1503
            F+  R +      LI MKFGMGTLDDMN+LKNK I SVADLLQDQF LALV LENAIRGT
Sbjct: 280  FLLPRDLLAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGT 339

Query: 1502 ICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPG 1323
            ICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPG
Sbjct: 340  ICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPG 399

Query: 1322 GLTGRAASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISE 1143
            GLTGR ASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHV+IGHWGSIESPFYEISE
Sbjct: 400  GLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHVKIGHWGSIESPFYEISE 459

Query: 1142 RSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQIHFRSIF 963
            RSK A+MIYLSPNRDEYYMVAAGNSLALNRGIQEEQ VPARYRQEFLTIAWEQIHFRSIF
Sbjct: 460  RSKEARMIYLSPNRDEYYMVAAGNSLALNRGIQEEQAVPARYRQEFLTIAWEQIHFRSIF 519

Query: 962  PFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVSV 783
            PFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVSV
Sbjct: 520  PFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVSV 579

Query: 782  IAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQRSNKNTCMHQKPQVPQGKCIKKGQILA 603
            IAEREGKIIYTDTHKIIFSS+GDTISIPLVMYQRSNKNTCMHQKPQV QGKCIKKGQILA
Sbjct: 580  IAEREGKIIYTDTHKIIFSSDGDTISIPLVMYQRSNKNTCMHQKPQVRQGKCIKKGQILA 639

Query: 602  DGAATVGGELSLGKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTS 423
            DGAATVGGEL+LGKNVLVAYMPWEGYN EDAVLISERLVYEDIYTSFHIRKYEIQTHVTS
Sbjct: 640  DGAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTS 699

Query: 422  QGPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLL 243
            QGPERITKEIPHLEAHLLRNLDR GIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLL
Sbjct: 700  QGPERITKEIPHLEAHLLRNLDRTGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLL 759

Query: 242  RAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDK 63
            RAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDK
Sbjct: 760  RAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDK 819

Query: 62   VAGRHGNKGIVSKILSRQDM 3
            VAGRHGNKGI+SKILSRQDM
Sbjct: 820  VAGRHGNKGIISKILSRQDM 839


>gb|AFB18328.1| RNA polymerase beta subunit, partial [Chlorophytum rhizopendulum]
          Length = 1070

 Score = 1053 bits (2723), Expect = 0.0
 Identities = 532/560 (95%), Positives = 541/560 (96%)
 Frame = -1

Query: 1682 FVTTRSIGRCQIFLIRMKFGMGTLDDMNNLKNKCIGSVADLLQDQFRLALVHLENAIRGT 1503
            F+  R +      LI MKFGMGTLDDMN+LKNK I SVADLLQDQF LALV LENAIRGT
Sbjct: 281  FLLPRDLLAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGT 340

Query: 1502 ICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPG 1323
            +CGAIRHKLIPTPQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPG
Sbjct: 341  VCGAIRHKLIPTPQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPG 400

Query: 1322 GLTGRAASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISE 1143
            GLTGR ASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISE
Sbjct: 401  GLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISE 460

Query: 1142 RSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQIHFRSIF 963
            RSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQIHFRSIF
Sbjct: 461  RSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQIHFRSIF 520

Query: 962  PFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVSV 783
            PFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVSV
Sbjct: 521  PFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVSV 580

Query: 782  IAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQRSNKNTCMHQKPQVPQGKCIKKGQILA 603
            IAEREGKIIYTDT+KIIFSSNGDTISIPLVMY+RSNKNTCMHQKPQV +GKCIKKGQILA
Sbjct: 581  IAEREGKIIYTDTYKIIFSSNGDTISIPLVMYRRSNKNTCMHQKPQVQRGKCIKKGQILA 640

Query: 602  DGAATVGGELSLGKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTS 423
            DGAATVGGEL+LGKNVLVAYMPWEGYN EDAVLISERLVYEDIYTSFHIRKYEIQTHVTS
Sbjct: 641  DGAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTS 700

Query: 422  QGPERITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVGKLTPQAANESSYAPEDRLL 243
            QGPE+ITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILV KLTPQAANESSYAPEDRLL
Sbjct: 701  QGPEKITKEIPHLEAHLLRNLDRNGIVMLGSWIEAGDILVSKLTPQAANESSYAPEDRLL 760

Query: 242  RAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYISQKREIKVGDK 63
            RAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYI QKREIKVGDK
Sbjct: 761  RAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQKKGGSSYNPERIRVYILQKREIKVGDK 820

Query: 62   VAGRHGNKGIVSKILSRQDM 3
            VAGRHGNKGIVSKILSRQDM
Sbjct: 821  VAGRHGNKGIVSKILSRQDM 840


>gb|AEX94354.1| RNA polymerase beta subunit (chloroplast) [Cordyline australis]
          Length = 1070

 Score = 1052 bits (2721), Expect = 0.0
 Identities = 536/587 (91%), Positives = 550/587 (93%)
 Frame = -1

Query: 1763 LSRLSSRALYRNIPCKLCS*HTLEQYIFVTTRSIGRCQIFLIRMKFGMGTLDDMNNLKNK 1584
            L R+  R + R +   +   +T     F+  R +      LI MKFGMGTLDDMN+LKNK
Sbjct: 258  LGRIGRRNMNRRLNLDIPQNNT-----FLLPRDLLAAADHLIGMKFGMGTLDDMNHLKNK 312

Query: 1583 CIGSVADLLQDQFRLALVHLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 1404
             I SVADLLQDQF LALV LENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH
Sbjct: 313  RIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPTPQNLVTSTSLTTTYESFFGLH 372

Query: 1403 PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRAASFRIRDIHPSHYGRICPIDTSEGINV 1224
            PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGR ASFRIRDIHPSHYGRICPIDTSEGINV
Sbjct: 373  PLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINV 432

Query: 1223 GLIGSLAIHVRIGHWGSIESPFYEISERSKRAQMIYLSPNRDEYYMVAAGNSLALNRGIQ 1044
            GLIGSLAIHVRIGHWGSIESPFYEISERSK A+MIYLSPNRDEYYMVAAGNSLALNRGIQ
Sbjct: 433  GLIGSLAIHVRIGHWGSIESPFYEISERSKEARMIYLSPNRDEYYMVAAGNSLALNRGIQ 492

Query: 1043 EEQVVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 864
            EEQ VPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA
Sbjct: 493  EEQAVPARYRQEFLTIAWEQIHFRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQA 552

Query: 863  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 684
            VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ
Sbjct: 553  VPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKIIYTDTHKIIFSSNGDTISIPLVMYQ 612

Query: 683  RSNKNTCMHQKPQVPQGKCIKKGQILADGAATVGGELSLGKNVLVAYMPWEGYNFEDAVL 504
            RSNKNTCMHQKPQV QGKCIKKGQILA GAATVGGEL+LGKNVLVAYMPWEGYN EDAVL
Sbjct: 613  RSNKNTCMHQKPQVRQGKCIKKGQILAYGAATVGGELALGKNVLVAYMPWEGYNSEDAVL 672

Query: 503  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 324
            ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI
Sbjct: 673  ISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLEAHLLRNLDRNGIVMLGSWI 732

Query: 323  EAGDILVGKLTPQAANESSYAPEDRLLRAILGIQVSTAKETSLKLPIGGRGRVIDVRWIQ 144
            EAGDILVGKLTPQAA+ESSYAPEDRLLRAILGI+VSTAKETSLKLP+GGRGRVIDVRWIQ
Sbjct: 733  EAGDILVGKLTPQAASESSYAPEDRLLRAILGIEVSTAKETSLKLPVGGRGRVIDVRWIQ 792

Query: 143  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIVSKILSRQDM 3
            KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGI+SKILSRQDM
Sbjct: 793  KKGGSSYNPERIRVYISQKREIKVGDKVAGRHGNKGIISKILSRQDM 839