BLASTX nr result
ID: Anemarrhena21_contig00014953
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00014953
(680 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 152 2e-34
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 152 2e-34
emb|CDP17738.1| unnamed protein product [Coffea canephora] 146 9e-33
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 117 4e-24
gb|AFB73912.1| polyprotein [Citrus sinensis] 116 1e-23
gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul... 115 2e-23
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 112 1e-22
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 112 2e-22
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 112 2e-22
gb|ABD63150.1| Putative retroelement pol polyprotein, related [A... 112 2e-22
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 112 2e-22
ref|XP_012441923.1| PREDICTED: uncharacterized protein LOC105766... 111 3e-22
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 111 3e-22
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 110 5e-22
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 110 7e-22
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 110 7e-22
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 110 7e-22
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 109 1e-21
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 109 2e-21
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 108 4e-21
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 152 bits (384), Expect = 2e-34
Identities = 92/232 (39%), Positives = 131/232 (56%), Gaps = 6/232 (2%)
Frame = +3
Query: 3 ILLSSLPDEEYETFVLTLINGKSSLSYDEVSAALVNYDMRKKEXXXXXXXXXXXXXXXXX 182
+LLSSLPDE +E TL++GK ++S D V +AL ++++RK++
Sbjct: 87 MLLSSLPDE-FEHLETTLLHGKENVSLDAVCSALYSHELRKQDKMRTKSTTSEEALVI-- 143
Query: 183 XXARGRSSNRKSSEDQRRPRYKSRSRL-GKDQCAFCKENGHWXXXXXXXXXXXXXSRSSE 359
RGR ++S +RR KS+ R+ KD+CAFC E GHW + +
Sbjct: 144 ---RGR---QQSQTKERRGMSKSKGRVVAKDECAFCHEKGHWKKDCPKLQKKEKVPQ--D 195
Query: 360 ANVAETXXXXXXXXXXXXXIMPTVCHSDASEWILDTGATYHVCPRREWFSSFEKXX---- 527
ANVAE I+ S EWILD+G TYH+CP R+WF F++
Sbjct: 196 ANVAECKSDVESDISL---IVSLSASSYPDEWILDSGCTYHMCPIRDWFFEFQELDGGVV 252
Query: 528 -MGNDHACRTVGVGTVLIKMFDGMVRELKEVRYVPSLKKNMISIGALESEGL 680
MGND+ C+TVG+G++ ++ DG R L++VRYVP LKKN+IS+GALES+GL
Sbjct: 253 YMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKGL 304
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 152 bits (383), Expect = 2e-34
Identities = 91/232 (39%), Positives = 132/232 (56%), Gaps = 6/232 (2%)
Frame = +3
Query: 3 ILLSSLPDEEYETFVLTLINGKSSLSYDEVSAALVNYDMRKKEXXXXXXXXXXXXXXXXX 182
+LLSSLPDE +E TL++GK ++S D V +AL ++++RK++
Sbjct: 88 MLLSSLPDE-FEHLETTLLHGKENVSLDVVCSALYSHELRKQDKMKTKSTTSEEALV--- 143
Query: 183 XXARGRSSNRKSSEDQRRPRYKSRSR-LGKDQCAFCKENGHWXXXXXXXXXXXXXSRSSE 359
ARGR ++S +RR KS+ R + KD+CAFC E GHW + +
Sbjct: 144 --ARGR---QQSQTKERRGMSKSKGRAVAKDECAFCHEKGHWKKDCPKLQKKEKVLQ--D 196
Query: 360 ANVAETXXXXXXXXXXXXXIMPTVCHSDASEWILDTGATYHVCPRREWFSSFEKXX---- 527
ANVAE + ++ EWILD+G TYH+CP R+WF F++
Sbjct: 197 ANVAECKSDVESDISLIVSLSASLY---LDEWILDSGCTYHMCPIRDWFFEFQELDGGVV 253
Query: 528 -MGNDHACRTVGVGTVLIKMFDGMVRELKEVRYVPSLKKNMISIGALESEGL 680
MGND+ C+TVG+G++ ++ DG R L++VRYVP LKKN+IS+GALES+GL
Sbjct: 254 YMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKGL 305
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 146 bits (369), Expect = 9e-33
Identities = 91/231 (39%), Positives = 128/231 (55%), Gaps = 5/231 (2%)
Frame = +3
Query: 3 ILLSSLPDEEYETFVLTLINGKSSLSYDEVSAALVNYDMRKKEXXXXXXXXXXXXXXXXX 182
+LLSSLPDE +E TL++GK ++S D V +AL + ++RK++
Sbjct: 174 MLLSSLPDE-FEHLETTLLHGKENVSLDAVCSALYSRELRKQDKKKKKVAAADEALV--- 229
Query: 183 XXARGRSSNRKSSEDQRRPRYKSRSRLGKDQCAFCKENGHWXXXXXXXXXXXXXSRSSEA 362
ARGR ++S RR KS SR+ KD+CAFC+E GHW + +
Sbjct: 230 --ARGR---QQSQSKGRRGWSKSISRVAKDECAFCREKGHWKKDCPKLKKKGKAPQ--DV 282
Query: 363 NVAETXXXXXXXXXXXXXIMPTVCHSDASEWILDTGATYHVCPRREWFSSFEKXX----- 527
NVAE + H D EWILD+ TYH+ P REWF FE+
Sbjct: 283 NVAECKSDAESDFSLA--VSRLTSHPD--EWILDSTCTYHMTPMREWFFEFEELDGGFVY 338
Query: 528 MGNDHACRTVGVGTVLIKMFDGMVRELKEVRYVPSLKKNMISIGALESEGL 680
MGND+ C+TVG+G++ ++ DG R LK+VRYVP+LK+++IS+G LES+GL
Sbjct: 339 MGNDNPCKTVGIGSIKLRNHDGSTRILKDVRYVPNLKRSLISLGLLESKGL 389
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 117 bits (294), Expect = 4e-24
Identities = 69/235 (29%), Positives = 105/235 (44%), Gaps = 10/235 (4%)
Frame = +3
Query: 3 ILLSSLPDEEYETFVLTLINGKSSLSYDEVSAALVNYDMRKKEXXXXXXXXXXXXXXXXX 182
ILL SLP Y F T++ + +L+ EV AL + KK
Sbjct: 88 ILLCSLPSS-YANFRDTILYSRDTLTLQEVYDALHAKEKMKKMVPSEGSNSQPESLVVRG 146
Query: 183 XXARGRSSNRKSSEDQRRPRYKSRSRLGKDQCAFCKENGH-----WXXXXXXXXXXXXXS 347
+ N+ + R +S+SR C +CK GH W
Sbjct: 147 RQQEKNTDNKSRDKSSSGYRGRSKSRGRYKSCKYCKRGGHDISDCWKLQNKEKHKGNYKP 206
Query: 348 RSSEANVAETXXXXXXXXXXXXXIMPTVCHSDASEWILDTGATYHVCPRREWFSSFE--- 518
+ + + + C + EW+LDTG TYH+CP R+WF+++E
Sbjct: 207 KGKQEEQGKAAVATDNKPDAELLVAYAGCVQTSDEWLLDTGCTYHMCPNRDWFTTYEPVQ 266
Query: 519 --KXXMGNDHACRTVGVGTVLIKMFDGMVRELKEVRYVPSLKKNMISIGALESEG 677
MG++ C+ GVGT+ IKMFDG +R L +VR++PSLK+N+IS+ L+ +G
Sbjct: 267 GGNVLMGDNTPCKVAGVGTIQIKMFDGCIRTLSDVRHIPSLKRNLISLSTLDRKG 321
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 116 bits (291), Expect = 1e-23
Identities = 76/236 (32%), Positives = 115/236 (48%), Gaps = 11/236 (4%)
Frame = +3
Query: 3 ILLSSLPDEEYETFVLTLINGK--SSLSYDEVSAALVNYDMRKKEXXXXXXXXXXXXXXX 176
+LL SLPD Y+ ++ L N SL +D+V+A+++N + R+K
Sbjct: 142 LLLQSLPDS-YDQLIINLTNNNPVDSLVFDDVAASVLNEESRRKNKENRQASSQQAEALS 200
Query: 177 XXXXARGRSSNRKSSEDQRRPRYKSRSRLGKDQCAFCKENGHWXXXXXXXXXXXXXSRSS 356
RGRS+ R S Q R KSRS+ +C C + GH +
Sbjct: 201 V---TRGRSTERGPSGSQNHGRSKSRSKKNV-KCYNCGKKGH-VKKECWSNQKRREGKEP 255
Query: 357 EANVAETXXXXXXXXXXXXXIMPTVCHSDASE----WILDTGATYHVCPRREWFSSFE-- 518
E++ A+ T+ W++D+GAT+H+ RREWF ++E
Sbjct: 256 ESSNAQGCVASTSDDGEILYSEATIVSEGRKRLSDVWLIDSGATWHMTSRREWFHTYEPI 315
Query: 519 ---KXXMGNDHACRTVGVGTVLIKMFDGMVRELKEVRYVPSLKKNMISIGALESEG 677
MGNDHA G+GT+ IKMFDG +R ++EVR+V LKKN++S+G ++S G
Sbjct: 316 SGGSVYMGNDHALEIAGIGTIKIKMFDGTIRTIEEVRHVNGLKKNLLSLGQMDSHG 371
>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
Length = 324
Score = 115 bits (288), Expect = 2e-23
Identities = 73/212 (34%), Positives = 110/212 (51%), Gaps = 6/212 (2%)
Frame = +3
Query: 3 ILLSSLPDEEYETFVLTLINGKSSLSYDEVSAALVNYDMRKKEXXXXXXXXXXXXXXXXX 182
+L+SSLPDE +E TL++GK ++S D V +AL ++++RK++
Sbjct: 127 MLVSSLPDE-FEHLETTLLHGKDNVSLDVVCSALYSHELRKQDKMKTKSTTSEEALV--- 182
Query: 183 XXARGRSSNRKSSEDQRRPRYKSRSRL-GKDQCAFCKENGHWXXXXXXXXXXXXXSRSSE 359
RG ++S +RR KS+ R+ KD+CAFC E GHW + +
Sbjct: 183 --TRG---GQQSQTKERRGMCKSKGRVVAKDECAFCHEKGHWKKDCPKLQKKEKVPQ--D 235
Query: 360 ANVAETXXXXXXXXXXXXXIMPTVCHSDASEWILDTGATYHVCPRREWFSSFEK-----X 524
ANVAE I+ S EWILD+G TYH+CP R+WF F++
Sbjct: 236 ANVAECKSDVESDISL---IVSLSASSYPDEWILDSGCTYHMCPIRDWFFEFQELDGGVV 292
Query: 525 XMGNDHACRTVGVGTVLIKMFDGMVRELKEVR 620
MGND+ C+T G+G++ ++ DG R L++VR
Sbjct: 293 YMGNDNPCKTAGIGSIKLRNHDGSTRILRDVR 324
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 112 bits (281), Expect = 1e-22
Identities = 67/235 (28%), Positives = 106/235 (45%), Gaps = 10/235 (4%)
Frame = +3
Query: 3 ILLSSLPDEEYETFVLTLINGKSSLSYDEVSAALVNYDMRKKEXXXXXXXXXXXXXXXXX 182
ILL SLP Y F T++ + +L+ EV AL + KK
Sbjct: 131 ILLCSLPSS-YANFRDTILYSRDTLTLKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVQG 189
Query: 183 XXARGRSSNRKSSEDQRRPRYKSRSRLGKDQCAFCKENGH-----WXXXXXXXXXXXXXS 347
++N+ + R +S+SR C +CK +GH W
Sbjct: 190 SQQEKNTNNKSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISKCWKLQDKDKRTGKYIP 249
Query: 348 RSSEANVAETXXXXXXXXXXXXXIMPTVCHSDASEWILDTGATYHVCPRREWFSSFE--- 518
+ + + + + C + +WILDT TYH+CP R+WF+++E
Sbjct: 250 KGKKEDEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQ 309
Query: 519 --KXXMGNDHACRTVGVGTVLIKMFDGMVRELKEVRYVPSLKKNMISIGALESEG 677
MG+D C G+GTV IKMFDG +R L +VR++P+LK+++IS+ L+ +G
Sbjct: 310 GGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKG 364
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 112 bits (280), Expect = 2e-22
Identities = 76/236 (32%), Positives = 113/236 (47%), Gaps = 11/236 (4%)
Frame = +3
Query: 3 ILLSSLPDEEYETFVLTLINGK--SSLSYDEVSAALVNYDMRKKEXXXXXXXXXXXXXXX 176
+LL SLPD Y+ V+ + N LS+++V+ A++ + R+K
Sbjct: 142 VLLQSLPDS-YDQLVINITNNNIVDRLSFNDVAGAILEEESRRKNKEDRQDSSKQMEALT 200
Query: 177 XXXXARGRSSNRKSSEDQRRPRYKSRSRLGKDQCAFCKENGHWXXXXXXXXXXXXXSRSS 356
RGRS+ R S Q R SR + +C C + GH +SS
Sbjct: 201 V---TRGRSTERGPSGSQNHGRSTSRRKTNL-KCYNCGKRGH--LKKDCWSNKKSGEKSS 254
Query: 357 EANVAETXXXXXXXXXXXXXIMPTVCHSDASE----WILDTGATYHVCPRREWFSSFE-- 518
EA+ ++ V + WI+D+GAT+H+ PRR+WF ++E
Sbjct: 255 EASTSQGCVASTSDDGEVLYSEAAVSTKGKNRLTDVWIVDSGATWHMTPRRDWFCTYEPV 314
Query: 519 ---KXXMGNDHACRTVGVGTVLIKMFDGMVRELKEVRYVPSLKKNMISIGALESEG 677
MGNDHA VG+GTV IKM+DG +R L+EVR+V L KN++S+G L+ G
Sbjct: 315 SEGNVFMGNDHALEIVGIGTVKIKMYDGTIRTLQEVRHVKELAKNLLSVGQLDDLG 370
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 112 bits (280), Expect = 2e-22
Identities = 67/235 (28%), Positives = 105/235 (44%), Gaps = 10/235 (4%)
Frame = +3
Query: 3 ILLSSLPDEEYETFVLTLINGKSSLSYDEVSAALVNYDMRKKEXXXXXXXXXXXXXXXXX 182
ILL SLP Y F T++ + +L+ EV AL + KK
Sbjct: 146 ILLCSLPSS-YANFRDTILYSRDTLTLKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRG 204
Query: 183 XXARGRSSNRKSSEDQRRPRYKSRSRLGKDQCAFCKENGH-----WXXXXXXXXXXXXXS 347
++N+ + R +S+SR C +CK +GH W
Sbjct: 205 SQQEKNTNNKSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISKCWKLQDKDKRTGKYIP 264
Query: 348 RSSEANVAETXXXXXXXXXXXXXIMPTVCHSDASEWILDTGATYHVCPRREWFSSFE--- 518
+ + + + C + +WILDT TYH+CP R+WF+++E
Sbjct: 265 KGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQ 324
Query: 519 --KXXMGNDHACRTVGVGTVLIKMFDGMVRELKEVRYVPSLKKNMISIGALESEG 677
MG+D C G+GTV IKMFDG +R L +VR++P+LK+++IS+ L+ +G
Sbjct: 325 GGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKG 379
>gb|ABD63150.1| Putative retroelement pol polyprotein, related [Asparagus
officinalis]
Length = 168
Score = 112 bits (279), Expect = 2e-22
Identities = 53/86 (61%), Positives = 67/86 (77%), Gaps = 5/86 (5%)
Frame = +3
Query: 435 HSDASEWILDTGATYHVCPRREWFSSFEKXXMG-----NDHACRTVGVGTVLIKMFDGMV 599
H DAS W+LD+GATYHV PRR+WFSSFE+ G ND +C +GTV I+M DG+V
Sbjct: 3 HLDASYWMLDSGATYHVTPRRDWFSSFERLDGGVIIMENDQSCGICTIGTVRIRMHDGVV 62
Query: 600 RELKEVRYVPSLKKNMISIGALESEG 677
RELK+VR+VP LKKN+IS+GALE++G
Sbjct: 63 RELKDVRFVPQLKKNLISVGALEAKG 88
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 112 bits (279), Expect = 2e-22
Identities = 76/230 (33%), Positives = 110/230 (47%), Gaps = 5/230 (2%)
Frame = +3
Query: 3 ILLSSLPDEEYETFVLTLINGKSSLSYDEVSAALVNYDMRKKEXXXXXXXXXXXXXXXXX 182
ILL SLP +E FV + I GK ++S +EV +AL + ++R K
Sbjct: 144 ILLVSLP-MSFENFVQSFIVGKDTVSLEEVRSALHSRELRHKANGTSTDIQPSGLFTSSR 202
Query: 183 XXARGRSSNRKSSEDQRRPRYKSRSRLGKDQCAFCKENGHWXXXXXXXXXXXXXSRSSEA 362
+GR + K ++ S+ D C +CKE GHW +S A
Sbjct: 203 ---KGRKNGGKKNKPM------SKGAKPDDVCNYCKEKGHW-KFDCPKKKKQSEKQSVSA 252
Query: 363 NVAETXXXXXXXXXXXXXIMPTVCHSDASEWILDTGATYHVCPRREWFSSFEK-----XX 527
VAE HSD W+LD+GA+YH+CPRREWF+++E+
Sbjct: 253 AVAEEDTNSEEDIALVAD--EHTHHSDV--WVLDSGASYHICPRREWFTTYEQVDGGSIS 308
Query: 528 MGNDHACRTVGVGTVLIKMFDGMVRELKEVRYVPSLKKNMISIGALESEG 677
M N C+ VG G++ I+ DG L EVR+VP + KN+IS+ L+S+G
Sbjct: 309 MANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLISLSLLDSKG 358
>ref|XP_012441923.1| PREDICTED: uncharacterized protein LOC105766925 [Gossypium
raimondii]
Length = 217
Score = 111 bits (278), Expect = 3e-22
Identities = 50/88 (56%), Positives = 68/88 (77%), Gaps = 5/88 (5%)
Frame = +3
Query: 432 CHSDASEWILDTGATYHVCPRREWFSSFEKXX-----MGNDHACRTVGVGTVLIKMFDGM 596
CH+D EWILD G TYH+CP ++WFSS ++ MGND AC+T+GVGT+ +K DG+
Sbjct: 3 CHTD--EWILDLGCTYHMCPNKDWFSSLKELEGGIVFMGNDSACKTMGVGTIQLKNHDGL 60
Query: 597 VRELKEVRYVPSLKKNMISIGALESEGL 680
++ L +VRY+PSLKKN+IS+G LES+GL
Sbjct: 61 IQVLTDVRYIPSLKKNLISLGVLESKGL 88
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 111 bits (278), Expect = 3e-22
Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 9/234 (3%)
Frame = +3
Query: 3 ILLSSLPDEEYETFVLTLINGKSSLSYDEVSAALVNYDMRKKEXXXXXXXXXXXXXXXXX 182
+LL SLP Y F T++ +S L+ EV AL N +E
Sbjct: 43 LLLCSLPSS-YANFRDTILLSRSELTLAEVYEALQN-----REKMKGMVQSDASSSKGEA 96
Query: 183 XXARGRSSNRKSSEDQRRPRYKSRSRL---GKDQCAFCKENGHWXXXXXXXXXXXXXSRS 353
RGRS R ++ R + +SR R GK C +CK+ H+
Sbjct: 97 LQVRGRSEQRTYNDSNDRDKNQSRGRSKSRGKKFCKYCKKKNHFIEECWKLQNKEKRKSD 156
Query: 354 SEANVAETXXXXXXXXXXXXXIMPTVCHSDASEWILDTGATYHVCPRREWFSSFEKXX-- 527
+A+V + + VC S EWILDT ++H+C R+WFSS++
Sbjct: 157 GKASVVTSADNSDSGDCLVVFV---VCVSSHDEWILDTTCSFHICINRDWFSSYKSVQNG 213
Query: 528 ----MGNDHACRTVGVGTVLIKMFDGMVRELKEVRYVPSLKKNMISIGALESEG 677
MG+D+ VG+G+V IK DGM R LK+VR++P + +N+IS+ L++EG
Sbjct: 214 DVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPRMARNLISLSTLDAEG 267
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 110 bits (276), Expect = 5e-22
Identities = 67/235 (28%), Positives = 105/235 (44%), Gaps = 10/235 (4%)
Frame = +3
Query: 3 ILLSSLPDEEYETFVLTLINGKSSLSYDEVSAALVNYDMRKKEXXXXXXXXXXXXXXXXX 182
ILL SLP Y F T++ + +L+ EV AL + KK
Sbjct: 55 ILLCSLPSS-YANFRDTILYSRDTLTLKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRG 113
Query: 183 XXARGRSSNRKSSEDQRRPRYKSRSRLGKDQCAFCKENGH-----WXXXXXXXXXXXXXS 347
++N+ + R +S+SR C +CK +GH W
Sbjct: 114 RQQEKNTNNKSRDKSSSIYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTRKYIP 173
Query: 348 RSSEANVAETXXXXXXXXXXXXXIMPTVCHSDASEWILDTGATYHVCPRREWFSSFEKXX 527
+ + + + C + +WILDT TYH+CP R+WF+++E
Sbjct: 174 KGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEAVQ 233
Query: 528 -----MGNDHACRTVGVGTVLIKMFDGMVRELKEVRYVPSLKKNMISIGALESEG 677
MG+D C G+GTV IKMFDG +R L +VR++P+LK+++IS+ L+ +G
Sbjct: 234 GGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKG 288
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 110 bits (275), Expect = 7e-22
Identities = 72/233 (30%), Positives = 107/233 (45%), Gaps = 8/233 (3%)
Frame = +3
Query: 3 ILLSSLPDEEYETFVLTLINGKSSLSYDEVSAALVNYDMRKKEXXXXXXXXXXXXXXXXX 182
+LL SLP+ Y F T++ + L+ EV AL N K++
Sbjct: 144 LLLCSLPNS-YANFRDTILLSRDELTLKEVYDALQN----KEKMKIMVQNDGSSSSKGEA 198
Query: 183 XXARGRSSNRKSSEDQ--RRPRYKSRSRLGKDQCAFCKENGHWXXXXXXXXXXXXXSRSS 356
RGR+ NR S+E RR R KS+ K C +CK H
Sbjct: 199 LHVRGRTENRTSNEKNYDRRGRSKSKPPGNKKFCVYCKLKNH-NIDECKKVQAKERKNKK 257
Query: 357 EANVAETXXXXXXXXXXXXXIMPTVCHSDASEWILDTGATYHVCPRREWFSSFEKXX--- 527
+ V+ ++ C + EWILD+ ++H+C +R WFSS++
Sbjct: 258 DGKVSVASAAASDDDSGDCLVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGD 317
Query: 528 ---MGNDHACRTVGVGTVLIKMFDGMVRELKEVRYVPSLKKNMISIGALESEG 677
MG+D+ C VG+G+V IK DGM R LK VRY+P + +N+IS+ L++EG
Sbjct: 318 VVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEG 370
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 110 bits (275), Expect = 7e-22
Identities = 72/233 (30%), Positives = 107/233 (45%), Gaps = 8/233 (3%)
Frame = +3
Query: 3 ILLSSLPDEEYETFVLTLINGKSSLSYDEVSAALVNYDMRKKEXXXXXXXXXXXXXXXXX 182
+LL SLP+ Y F T++ + L+ EV AL N K++
Sbjct: 144 LLLCSLPNS-YANFRDTILLSRDELTLKEVYDALQN----KEKMKIMVQNDGSSSSKGEA 198
Query: 183 XXARGRSSNRKSSEDQ--RRPRYKSRSRLGKDQCAFCKENGHWXXXXXXXXXXXXXSRSS 356
RGR+ NR S+E RR R KS+ K C +CK H
Sbjct: 199 LHVRGRTENRTSNEKNYDRRGRSKSKPPGNKKFCVYCKLKNH-NIDECKKVQAKERKNKK 257
Query: 357 EANVAETXXXXXXXXXXXXXIMPTVCHSDASEWILDTGATYHVCPRREWFSSFEKXX--- 527
+ V+ ++ C + EWILD+ ++H+C +R WFSS++
Sbjct: 258 DGKVSVASAAASDDDSGDCLVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGD 317
Query: 528 ---MGNDHACRTVGVGTVLIKMFDGMVRELKEVRYVPSLKKNMISIGALESEG 677
MG+D+ C VG+G+V IK DGM R LK VRY+P + +N+IS+ L++EG
Sbjct: 318 VVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEG 370
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 110 bits (275), Expect = 7e-22
Identities = 72/233 (30%), Positives = 107/233 (45%), Gaps = 8/233 (3%)
Frame = +3
Query: 3 ILLSSLPDEEYETFVLTLINGKSSLSYDEVSAALVNYDMRKKEXXXXXXXXXXXXXXXXX 182
+LL SLP+ Y F T++ + L+ EV AL N K++
Sbjct: 144 LLLCSLPNS-YANFRDTILLSRDELTLKEVYDALQN----KEKMKIMVQNDGSSSSKGEA 198
Query: 183 XXARGRSSNRKSSEDQ--RRPRYKSRSRLGKDQCAFCKENGHWXXXXXXXXXXXXXSRSS 356
RGR+ NR S+E RR R KS+ K C +CK H
Sbjct: 199 LHVRGRTENRTSNEKNYDRRGRSKSKPPGNKKFCVYCKLKNH-NIDECKKVQAKERKNKK 257
Query: 357 EANVAETXXXXXXXXXXXXXIMPTVCHSDASEWILDTGATYHVCPRREWFSSFEKXX--- 527
+ V+ ++ C + EWILD+ ++H+C +R WFSS++
Sbjct: 258 DGKVSVASAAASDDDSGDCLVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGD 317
Query: 528 ---MGNDHACRTVGVGTVLIKMFDGMVRELKEVRYVPSLKKNMISIGALESEG 677
MG+D+ C VG+G+V IK DGM R LK VRY+P + +N+IS+ L++EG
Sbjct: 318 VVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEG 370
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 109 bits (273), Expect = 1e-21
Identities = 66/235 (28%), Positives = 103/235 (43%), Gaps = 10/235 (4%)
Frame = +3
Query: 3 ILLSSLPDEEYETFVLTLINGKSSLSYDEVSAALVNYDMRKKEXXXXXXXXXXXXXXXXX 182
ILL SLP Y F T++ + +L+ EV AL + KK
Sbjct: 88 ILLCSLPSS-YANFRDTILYSRDTLTLKEVYDALHTKEKMKKMVPSEGSNSQAEGLVVRG 146
Query: 183 XXARGRSSNRKSSEDQRRPRYKSRSRLGKDQCAFCKENGH-----WXXXXXXXXXXXXXS 347
+ + N+ + R +S+SR C +CK +GH W
Sbjct: 147 RQQKKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTRKYIP 206
Query: 348 RSSEANVAETXXXXXXXXXXXXXIMPTVCHSDASEWILDTGATYHVCPRREWFSSFEKXX 527
+ + + + C + +WILDT TYH+CP R+WF+++E
Sbjct: 207 KGKKEEEGKAAIVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEAVQ 266
Query: 528 -----MGNDHACRTVGVGTVLIKMFDGMVRELKEVRYVPSLKKNMISIGALESEG 677
MG+D C G+G V IKMFDG +R L +VR+ P+LK+++IS+ L+ +G
Sbjct: 267 GGTVLMGDDTPCEVAGIGIVQIKMFDGCIRTLSDVRHFPNLKRSLISLRTLDRKG 321
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 109 bits (272), Expect = 2e-21
Identities = 71/233 (30%), Positives = 107/233 (45%), Gaps = 8/233 (3%)
Frame = +3
Query: 3 ILLSSLPDEEYETFVLTLINGKSSLSYDEVSAALVNYDMRKKEXXXXXXXXXXXXXXXXX 182
+LL SLP+ Y F T++ + L+ EV AL N K++
Sbjct: 146 LLLCSLPNS-YANFRDTILLSRDELTLKEVYDALQN----KEKMKIMVQNDGSSSSKGEA 200
Query: 183 XXARGRSSNRKSSEDQ--RRPRYKSRSRLGKDQCAFCKENGHWXXXXXXXXXXXXXSRSS 356
RGR+ N+ S+E RR R KS+ K C +CK H
Sbjct: 201 LHVRGRTENKTSNEKNYDRRGRSKSKPPGNKKFCVYCKLKNH-NIDECKKVQAKERKNKK 259
Query: 357 EANVAETXXXXXXXXXXXXXIMPTVCHSDASEWILDTGATYHVCPRREWFSSFEKXX--- 527
+ V+ ++ C + EWILD+ ++H+C +R WFSS++
Sbjct: 260 DGKVSVASAAVSDDDSGDCLVVFAGCVAGHDEWILDSACSFHICTKRNWFSSYKPVQKGD 319
Query: 528 ---MGNDHACRTVGVGTVLIKMFDGMVRELKEVRYVPSLKKNMISIGALESEG 677
MG+D+ C VG+G+V IK DGM R LK VRY+P + +N+IS+ L++EG
Sbjct: 320 VVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTLDAEG 372
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 108 bits (269), Expect = 4e-21
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 10/235 (4%)
Frame = +3
Query: 3 ILLSSLPDEEYETFVLTLINGKSSLSYDEVSAALVNYDMRKKEXXXXXXXXXXXXXXXXX 182
ILL SLP Y F T++ +L EV AL + KK
Sbjct: 181 ILLCSLPSS-YANFRDTILYSHDTLILKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRG 239
Query: 183 XXARGRSSNRKSSEDQRRPRYKSRSRLGKDQCAFCKENGH-----WXXXXXXXXXXXXXS 347
+ N+ + R +S+SR C +CK +GH W
Sbjct: 240 RQQEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTGKYIP 299
Query: 348 RSSEANVAETXXXXXXXXXXXXXIMPTVCHSDASEWILDTGATYHVCPRREWFSSFEKXX 527
+ + + + C + +WILDT TYH+CP R+WF+++E
Sbjct: 300 KGKKEEEGKAAVVTDEKSDTELLVAYAGCAQTSDQWILDTAWTYHMCPNRDWFATYEALQ 359
Query: 528 -----MGNDHACRTVGVGTVLIKMFDGMVRELKEVRYVPSLKKNMISIGALESEG 677
MG+D C G+GTV IKMFDG +R L +VR++P+LK+++IS+ L+ +G
Sbjct: 360 GGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKG 414