BLASTX nr result
ID: Anemarrhena21_contig00014416
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00014416
(848 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009386469.1| PREDICTED: DNA-directed RNA polymerases II a... 295 3e-77
ref|XP_006858910.1| PREDICTED: DNA-directed RNA polymerases II a... 292 2e-76
ref|XP_010930084.1| PREDICTED: DNA-directed RNA polymerases II a... 291 3e-76
ref|XP_010928511.1| PREDICTED: DNA-directed RNA polymerases II a... 291 4e-76
ref|XP_008801856.1| PREDICTED: DNA-directed RNA polymerases II a... 291 4e-76
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases II a... 291 5e-76
ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II a... 288 2e-75
ref|XP_006644871.1| PREDICTED: DNA-directed RNA polymerases II a... 287 5e-75
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr... 287 5e-75
ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases II a... 287 5e-75
ref|XP_006381734.1| DNA-directed RNA polymerase family protein [... 286 1e-74
ref|XP_010274103.1| PREDICTED: DNA-directed RNA polymerases II a... 286 2e-74
ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II a... 285 2e-74
ref|NP_001044564.1| Os01g0805800 [Oryza sativa Japonica Group] g... 285 2e-74
ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit famil... 285 3e-74
ref|XP_009775519.1| PREDICTED: DNA-directed RNA polymerases II a... 284 4e-74
ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases II a... 284 4e-74
ref|XP_009380333.1| PREDICTED: DNA-directed RNA polymerases II a... 284 6e-74
ref|XP_012477196.1| PREDICTED: DNA-directed RNA polymerases II a... 283 1e-73
ref|XP_009605258.1| PREDICTED: DNA-directed RNA polymerases II a... 283 1e-73
>ref|XP_009386469.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A [Musa
acuminata subsp. malaccensis]
gi|695078182|ref|XP_009386470.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A [Musa acuminata
subsp. malaccensis] gi|695078184|ref|XP_009386471.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A [Musa acuminata subsp. malaccensis]
gi|695078186|ref|XP_009386472.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A [Musa acuminata
subsp. malaccensis]
Length = 207
Score = 295 bits (755), Expect = 3e-77
Identities = 151/209 (72%), Positives = 181/209 (86%), Gaps = 2/209 (0%)
Frame = -2
Query: 760 MAASE-ESMRLFRIRKNTMEMLKERGYLVVDV-ELTMDFKQFKEKFGDSVNRDDLVISKA 587
MA SE E RLFRIR+ M+ML++RGYLVV ++ ++ +QF EK+G++ RD+LVI+K
Sbjct: 1 MATSEGEVSRLFRIRRTVMQMLRDRGYLVVAAKDIDINMRQFLEKYGENPKRDELVINKQ 60
Query: 586 KKDNPSDQIFVFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAV 407
KK++ +DQI+VFFP E KVGVK IK+Y+ERMKQENVFRAILVVQQNLTPFARSS+Q+
Sbjct: 61 KKNDNNDQIYVFFPTEAKVGVKQIKQYVERMKQENVFRAILVVQQNLTPFARSSLQE--A 118
Query: 406 SQKYHLEVFQEAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIAR 227
SQKYHLEVFQEAELLVNI H+LVPEHQVL+ EEKK LL RY LKETQLPRIQ++DPIAR
Sbjct: 119 SQKYHLEVFQEAELLVNIKDHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQVTDPIAR 178
Query: 226 YHGLRRGQVVKIIRPSETAGRYITYRYVI 140
Y+GL+RGQVVKIIRPSETAGRY+TYRYV+
Sbjct: 179 YYGLKRGQVVKIIRPSETAGRYVTYRYVV 207
>ref|XP_006858910.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Amborella trichopoda] gi|548863022|gb|ERN20377.1|
hypothetical protein AMTR_s00068p00034280 [Amborella
trichopoda]
Length = 206
Score = 292 bits (747), Expect = 2e-76
Identities = 141/203 (69%), Positives = 174/203 (85%)
Frame = -2
Query: 748 EESMRLFRIRKNTMEMLKERGYLVVDVELTMDFKQFKEKFGDSVNRDDLVISKAKKDNPS 569
+++ +LFRIR+ M+ML++RGYLV D E+ M QF EKFGD V +DDLVI+K ++NPS
Sbjct: 6 DQTSKLFRIRRTLMQMLRDRGYLVGDFEINMTKAQFIEKFGDEVKKDDLVINKTMRNNPS 65
Query: 568 DQIFVFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAVSQKYHL 389
+QI+VFFP E+KVGVK +K Y ERMK ENVFRAILV+QQNLTPFAR +Q+ +S K+HL
Sbjct: 66 EQIYVFFPEEQKVGVKTVKTYTERMKSENVFRAILVLQQNLTPFARQCVQE--ISAKFHL 123
Query: 388 EVFQEAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIARYHGLRR 209
E+FQE+ELLVNI +H+LVPEHQVL+ EEKK LL RY LKETQLPRIQ++DPIARY+GL+R
Sbjct: 124 EIFQESELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 183
Query: 208 GQVVKIIRPSETAGRYITYRYVI 140
GQVVKIIRPSETAGRY+TYRYV+
Sbjct: 184 GQVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_010930084.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Elaeis guineensis] gi|743814587|ref|XP_010930085.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like [Elaeis guineensis]
gi|743814591|ref|XP_010930086.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like [Elaeis
guineensis]
Length = 204
Score = 291 bits (746), Expect = 3e-76
Identities = 144/205 (70%), Positives = 177/205 (86%)
Frame = -2
Query: 754 ASEESMRLFRIRKNTMEMLKERGYLVVDVELTMDFKQFKEKFGDSVNRDDLVISKAKKDN 575
+ ++ RLFRIR+ M+ML++RGYLV+D+E+ M+ QF EKFG+ V R+DLVI+KAKK++
Sbjct: 2 SEDDISRLFRIRRTVMQMLRDRGYLVLDLEINMNKLQFLEKFGEGVKREDLVINKAKKND 61
Query: 574 PSDQIFVFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAVSQKY 395
P+DQI+VFFPN+ KVGVK IK+Y+ERMK ENV R ILVVQQ LTPFAR S+ + VSQKY
Sbjct: 62 PADQIYVFFPNDAKVGVKQIKQYVERMKAENVTRGILVVQQALTPFARQSLAE--VSQKY 119
Query: 394 HLEVFQEAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIARYHGL 215
LEVFQ+ ELLVNI +H+LVPEHQVL+ EEKK LL RY LKETQLPRIQ++DPIARY+GL
Sbjct: 120 MLEVFQDTELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQVTDPIARYYGL 179
Query: 214 RRGQVVKIIRPSETAGRYITYRYVI 140
+RGQVVKIIRPSETAGRY+TYRYV+
Sbjct: 180 KRGQVVKIIRPSETAGRYVTYRYVV 204
>ref|XP_010928511.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Elaeis guineensis] gi|743809116|ref|XP_010928512.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like [Elaeis guineensis]
Length = 204
Score = 291 bits (745), Expect = 4e-76
Identities = 143/205 (69%), Positives = 178/205 (86%)
Frame = -2
Query: 754 ASEESMRLFRIRKNTMEMLKERGYLVVDVELTMDFKQFKEKFGDSVNRDDLVISKAKKDN 575
+ ++ RLFRIR+ M+ML++RGYLV+D+E+ M+ +QF EKFG+ V R+DLVI+KAKK++
Sbjct: 2 SEDDISRLFRIRRTVMQMLRDRGYLVLDLEINMNKRQFLEKFGEGVKREDLVINKAKKND 61
Query: 574 PSDQIFVFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAVSQKY 395
P+DQI+VFFPN+ KVGVK IK+Y+ERMK ENV R ILVVQQ LTPFAR S+ + VS KY
Sbjct: 62 PADQIYVFFPNDAKVGVKQIKQYVERMKAENVVRGILVVQQALTPFARQSLAE--VSHKY 119
Query: 394 HLEVFQEAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIARYHGL 215
LEVFQ++ELLVNI +H+LVPEHQVL+ EEKK LL RY LKETQLPRIQ++DPIARY+GL
Sbjct: 120 MLEVFQDSELLVNIKEHVLVPEHQVLTAEEKKTLLERYTLKETQLPRIQVTDPIARYYGL 179
Query: 214 RRGQVVKIIRPSETAGRYITYRYVI 140
+RGQVVKIIRPSETAGRY+TYRYV+
Sbjct: 180 KRGQVVKIIRPSETAGRYVTYRYVV 204
>ref|XP_008801856.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Phoenix dactylifera] gi|672163987|ref|XP_008801857.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like [Phoenix dactylifera]
Length = 204
Score = 291 bits (745), Expect = 4e-76
Identities = 143/199 (71%), Positives = 174/199 (87%)
Frame = -2
Query: 736 RLFRIRKNTMEMLKERGYLVVDVELTMDFKQFKEKFGDSVNRDDLVISKAKKDNPSDQIF 557
RLFRIR+ M+ML++RGYLV+D+E+ M+ QF EKFG+ V RDDLVI+KAKK++P+DQI+
Sbjct: 8 RLFRIRRTVMQMLRDRGYLVLDLEINMNKNQFLEKFGEGVKRDDLVINKAKKNDPADQIY 67
Query: 556 VFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAVSQKYHLEVFQ 377
VFFPN+ KVGVK IK+Y+ERMK ENV R ILVVQQ LTPFA+ S+ + V+QKY LEVFQ
Sbjct: 68 VFFPNDAKVGVKQIKQYVERMKAENVVRGILVVQQALTPFAKQSLTE--VAQKYLLEVFQ 125
Query: 376 EAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIARYHGLRRGQVV 197
+AELLVNI H+LVPEHQVL+ EEKK LL RY LKETQLPRIQ++DP+ARY+GL+RGQVV
Sbjct: 126 DAELLVNIKDHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQVTDPVARYYGLKRGQVV 185
Query: 196 KIIRPSETAGRYITYRYVI 140
KIIRPSETAGRY+TYRYV+
Sbjct: 186 KIIRPSETAGRYVTYRYVV 204
>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A [Vitis
vinifera] gi|225445172|ref|XP_002284110.1| PREDICTED:
DNA-directed RNA polymerases II and IV subunit 5A [Vitis
vinifera]
Length = 206
Score = 291 bits (744), Expect = 5e-76
Identities = 149/208 (71%), Positives = 175/208 (84%), Gaps = 1/208 (0%)
Frame = -2
Query: 760 MAASEESM-RLFRIRKNTMEMLKERGYLVVDVELTMDFKQFKEKFGDSVNRDDLVISKAK 584
M+ASEE + RLFRIRK M+MLK+RGY V D E+ M QF KFG+++ R+DLVI+KAK
Sbjct: 1 MSASEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAK 60
Query: 583 KDNPSDQIFVFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAVS 404
+ + SDQI+VFFP E+KVGVK +K Y RMK ENVFRAILVVQQNLTPFAR+ I + +S
Sbjct: 61 RTDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINE--IS 118
Query: 403 QKYHLEVFQEAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIARY 224
K+HLEVFQEAELLVNI +H+LVPEHQVL+ EEKK LL RY +KETQLPRIQ+SDPIARY
Sbjct: 119 TKFHLEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARY 178
Query: 223 HGLRRGQVVKIIRPSETAGRYITYRYVI 140
GL+RGQVVKIIRPSETAGRYITYRYV+
Sbjct: 179 FGLKRGQVVKIIRPSETAGRYITYRYVV 206
>ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Populus euphratica]
Length = 206
Score = 288 bits (738), Expect = 2e-75
Identities = 144/203 (70%), Positives = 173/203 (85%)
Frame = -2
Query: 748 EESMRLFRIRKNTMEMLKERGYLVVDVELTMDFKQFKEKFGDSVNRDDLVISKAKKDNPS 569
EE RLFRIRK M+MLK+RGY V D E+ M +QF+ K+G+++ R+DLVI+K K+++ S
Sbjct: 6 EEIKRLFRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTKRNDSS 65
Query: 568 DQIFVFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAVSQKYHL 389
DQI+VFFP E KVGVK +K Y RMK ENVFRAILVVQQNLTPFAR+ I + +S K+HL
Sbjct: 66 DQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINE--ISTKFHL 123
Query: 388 EVFQEAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIARYHGLRR 209
EVFQEAELLVNI +H+LVPEHQVLS+EEKK LL RY +KETQLPRIQ++DPIARY+GL+R
Sbjct: 124 EVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYGLKR 183
Query: 208 GQVVKIIRPSETAGRYITYRYVI 140
GQVVKIIRPSETAGRY+TYRYVI
Sbjct: 184 GQVVKIIRPSETAGRYVTYRYVI 206
>ref|XP_006644871.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Oryza brachyantha]
Length = 210
Score = 287 bits (735), Expect = 5e-75
Identities = 141/206 (68%), Positives = 179/206 (86%), Gaps = 2/206 (0%)
Frame = -2
Query: 751 SEESM--RLFRIRKNTMEMLKERGYLVVDVELTMDFKQFKEKFGDSVNRDDLVISKAKKD 578
+EE+M RL RIR+ M+ML++RGYLVV+ EL M + F KFG+S +R+DL+I+K KK+
Sbjct: 7 TEEAMVGRLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKFGESFHREDLLINKYKKN 66
Query: 577 NPSDQIFVFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAVSQK 398
+PSDQI+VFFPN++KVG+KHIK+Y+E MK ENV RA+LV+QQNLTPFARS +Q+ + K
Sbjct: 67 DPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARSFLQE--LEPK 124
Query: 397 YHLEVFQEAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIARYHG 218
HLE+FQEAELL+NI +H+L+PEHQVL++EEKK LL RY LKETQLPRIQ++DPIARY+G
Sbjct: 125 IHLEIFQEAELLINIKEHVLIPEHQVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYG 184
Query: 217 LRRGQVVKIIRPSETAGRYITYRYVI 140
LRRGQVVKIIRPSETAGRY+TYRYV+
Sbjct: 185 LRRGQVVKIIRPSETAGRYVTYRYVV 210
>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
gi|567918420|ref|XP_006451216.1| hypothetical protein
CICLE_v10009504mg [Citrus clementina]
gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Citrus sinensis] gi|568843558|ref|XP_006475671.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like isoform X2 [Citrus sinensis]
gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X3
[Citrus sinensis] gi|557554441|gb|ESR64455.1|
hypothetical protein CICLE_v10009504mg [Citrus
clementina] gi|557554442|gb|ESR64456.1| hypothetical
protein CICLE_v10009504mg [Citrus clementina]
Length = 206
Score = 287 bits (735), Expect = 5e-75
Identities = 142/205 (69%), Positives = 176/205 (85%)
Frame = -2
Query: 754 ASEESMRLFRIRKNTMEMLKERGYLVVDVELTMDFKQFKEKFGDSVNRDDLVISKAKKDN 575
+ EE RLFRIR+ M+ML++RGY V D E+ M +QF KFG+++ R+DLVI+KA +++
Sbjct: 4 SDEEIKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKALRND 63
Query: 574 PSDQIFVFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAVSQKY 395
SDQI+VFFP+E+KVGVK +K Y RMK ENVFRAILVVQQNLTPFAR+ IQ+ +S K+
Sbjct: 64 SSDQIYVFFPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIQE--ISAKF 121
Query: 394 HLEVFQEAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIARYHGL 215
HLEVFQEAELLVNI +H+LVPEHQVL++EEKK LL RY +KETQLPRIQ++DPIARY+GL
Sbjct: 122 HLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLKRYTVKETQLPRIQVTDPIARYYGL 181
Query: 214 RRGQVVKIIRPSETAGRYITYRYVI 140
+RGQVVKIIRPSETAGRY+TYRYV+
Sbjct: 182 KRGQVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Solanum lycopersicum]
Length = 206
Score = 287 bits (735), Expect = 5e-75
Identities = 143/208 (68%), Positives = 176/208 (84%), Gaps = 1/208 (0%)
Frame = -2
Query: 760 MAASEESM-RLFRIRKNTMEMLKERGYLVVDVELTMDFKQFKEKFGDSVNRDDLVISKAK 584
MA SEE + +LFR+RK MEML +RGYLV D E+ M QF +K+G+++ R+DLVI KAK
Sbjct: 1 MALSEEELSKLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVIQKAK 60
Query: 583 KDNPSDQIFVFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAVS 404
++N SDQI+VFFP E KVGVK +K Y ERMK+E+VF+AIL+VQQNLTPFAR+ I + +S
Sbjct: 61 RNNSSDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISE--IS 118
Query: 403 QKYHLEVFQEAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIARY 224
K+HLEVFQEAE+LVNI H+L+PEHQ+LS EEKK LL RY +KETQLPRIQ++DPIARY
Sbjct: 119 TKFHLEVFQEAEMLVNIKNHVLIPEHQLLSPEEKKTLLERYTVKETQLPRIQITDPIARY 178
Query: 223 HGLRRGQVVKIIRPSETAGRYITYRYVI 140
+GL+RGQVVKIIRPSETAGRYITYRYV+
Sbjct: 179 YGLKRGQVVKIIRPSETAGRYITYRYVV 206
>ref|XP_006381734.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 206
Score = 286 bits (732), Expect = 1e-74
Identities = 143/203 (70%), Positives = 172/203 (84%)
Frame = -2
Query: 748 EESMRLFRIRKNTMEMLKERGYLVVDVELTMDFKQFKEKFGDSVNRDDLVISKAKKDNPS 569
EE RL RIRK M+MLK+RGY V D E+ M +QF+ K+G+++ R+DLVI+K K+++ S
Sbjct: 6 EEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTKRNDSS 65
Query: 568 DQIFVFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAVSQKYHL 389
DQI+VFFP E KVGVK +K Y RMK ENVFRAILVVQQNLTPFAR+ I + +S K+HL
Sbjct: 66 DQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINE--ISTKFHL 123
Query: 388 EVFQEAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIARYHGLRR 209
EVFQEAELLVNI +H+LVPEHQVLS+EEKK LL RY +KETQLPRIQ++DPIARY+GL+R
Sbjct: 124 EVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYGLKR 183
Query: 208 GQVVKIIRPSETAGRYITYRYVI 140
GQVVKIIRPSETAGRY+TYRYVI
Sbjct: 184 GQVVKIIRPSETAGRYVTYRYVI 206
>ref|XP_010274103.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Nelumbo nucifera] gi|720057870|ref|XP_010274104.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A [Nelumbo nucifera]
Length = 206
Score = 286 bits (731), Expect = 2e-74
Identities = 144/208 (69%), Positives = 176/208 (84%), Gaps = 1/208 (0%)
Frame = -2
Query: 760 MAASEESM-RLFRIRKNTMEMLKERGYLVVDVELTMDFKQFKEKFGDSVNRDDLVISKAK 584
M++SE+ + RLFRIR+ ++MLK+RGYLV D EL M QF K+G++V R+DLVI+KAK
Sbjct: 1 MSSSEDEITRLFRIRRTVIQMLKDRGYLVGDFELNMTRSQFVSKYGENVKREDLVINKAK 60
Query: 583 KDNPSDQIFVFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAVS 404
+++ SDQIFVFFP E+KVGVK +K Y RMK ENVFRAILVVQQNLT FA++ I + ++
Sbjct: 61 RNDSSDQIFVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTAFAKTCINE--IA 118
Query: 403 QKYHLEVFQEAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIARY 224
K+HLEVFQEAELLVNI +H+LVPEHQVL+ EEKK LL RY LKETQLPRIQ+ DPIARY
Sbjct: 119 AKFHLEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQIGDPIARY 178
Query: 223 HGLRRGQVVKIIRPSETAGRYITYRYVI 140
+GL+RGQVVKIIRPSETAGRY+TYRYV+
Sbjct: 179 YGLKRGQVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum tuberosum]
Length = 206
Score = 285 bits (730), Expect = 2e-74
Identities = 142/208 (68%), Positives = 176/208 (84%), Gaps = 1/208 (0%)
Frame = -2
Query: 760 MAASEESM-RLFRIRKNTMEMLKERGYLVVDVELTMDFKQFKEKFGDSVNRDDLVISKAK 584
MA SEE + RLFR+RK MEML +RGYLV D E+ M QF +K+G+++ R+DLV+ KAK
Sbjct: 1 MALSEEELSRLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVLQKAK 60
Query: 583 KDNPSDQIFVFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAVS 404
++N SDQI+VFFP E KVGVK +K Y ERMK+E+VF+AIL+VQQNLTPFAR+ I + +S
Sbjct: 61 RNNSSDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISE--IS 118
Query: 403 QKYHLEVFQEAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIARY 224
K+HLEVFQEAE+LVNI H+L+PEH +LS EEKK+LL RY +KETQLPRIQ++DPIARY
Sbjct: 119 TKFHLEVFQEAEMLVNIKNHVLIPEHLLLSPEEKKSLLERYTVKETQLPRIQITDPIARY 178
Query: 223 HGLRRGQVVKIIRPSETAGRYITYRYVI 140
+GL+RGQVVKIIRPSETAGRYITYRYV+
Sbjct: 179 YGLKRGQVVKIIRPSETAGRYITYRYVV 206
>ref|NP_001044564.1| Os01g0805800 [Oryza sativa Japonica Group]
gi|55296830|dbj|BAD68174.1| putative DNA-directed RNA
polymerase II 23K chain [Oryza sativa Japonica Group]
gi|113534095|dbj|BAF06478.1| Os01g0805800 [Oryza sativa
Japonica Group] gi|215737136|dbj|BAG96065.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215765546|dbj|BAG87243.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218189238|gb|EEC71665.1| hypothetical protein
OsI_04128 [Oryza sativa Indica Group]
Length = 210
Score = 285 bits (730), Expect = 2e-74
Identities = 141/206 (68%), Positives = 178/206 (86%), Gaps = 2/206 (0%)
Frame = -2
Query: 751 SEESM--RLFRIRKNTMEMLKERGYLVVDVELTMDFKQFKEKFGDSVNRDDLVISKAKKD 578
+EE M RL RIR+ M+ML++RGYLVV+ EL M + F K+G+S +R+DL+I+K KK+
Sbjct: 7 TEEVMVGRLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKYGESFHREDLLINKYKKN 66
Query: 577 NPSDQIFVFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAVSQK 398
+PSDQI+VFFPN++KVG+KHIK+Y+E MK ENV RA+LV+QQNLTPFARS +Q+ + K
Sbjct: 67 DPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARSFLQE--LEPK 124
Query: 397 YHLEVFQEAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIARYHG 218
HLE+FQEAELL+NI +H+LVPEHQVL++EEKK LL RY LKETQLPRIQ++DPIARY+G
Sbjct: 125 IHLEIFQEAELLINIKEHVLVPEHQVLNNEEKKTLLERYTLKETQLPRIQITDPIARYYG 184
Query: 217 LRRGQVVKIIRPSETAGRYITYRYVI 140
LRRGQVVKIIRPSETAGRY+TYRYV+
Sbjct: 185 LRRGQVVKIIRPSETAGRYVTYRYVV 210
>ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao] gi|508783467|gb|EOY30723.1| Eukaryotic
rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 206
Score = 285 bits (729), Expect = 3e-74
Identities = 140/205 (68%), Positives = 173/205 (84%)
Frame = -2
Query: 754 ASEESMRLFRIRKNTMEMLKERGYLVVDVELTMDFKQFKEKFGDSVNRDDLVISKAKKDN 575
+ +E RLFRIRK M+MLK+RGY V D E+TM QF K+G+++ R+DLVI+K K+++
Sbjct: 4 SDDEIKRLFRIRKTVMQMLKDRGYFVGDFEITMTKAQFISKYGENMKREDLVINKTKRND 63
Query: 574 PSDQIFVFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAVSQKY 395
SDQI+VFFP+E KVGVK +K Y RMK ENVFRA+LVVQQNLTPFAR+ I + +S K+
Sbjct: 64 NSDQIYVFFPDEAKVGVKTMKTYTNRMKSENVFRAVLVVQQNLTPFARTCINE--ISSKF 121
Query: 394 HLEVFQEAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIARYHGL 215
HLEVFQE+ELLVN+ +H LVPEHQVL++EEKK LL RY +KETQLPRIQ+SDPIARY+GL
Sbjct: 122 HLEVFQESELLVNVKEHSLVPEHQVLTNEEKKTLLQRYTVKETQLPRIQVSDPIARYYGL 181
Query: 214 RRGQVVKIIRPSETAGRYITYRYVI 140
+RGQVVKIIRPSETAGRY+TYRYV+
Sbjct: 182 KRGQVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_009775519.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Nicotiana sylvestris] gi|698573867|ref|XP_009775520.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like [Nicotiana sylvestris]
Length = 206
Score = 284 bits (727), Expect = 4e-74
Identities = 142/205 (69%), Positives = 172/205 (83%)
Frame = -2
Query: 754 ASEESMRLFRIRKNTMEMLKERGYLVVDVELTMDFKQFKEKFGDSVNRDDLVISKAKKDN 575
+ EE RLFR+RK MEML +RGYLV + E+ M QF +K+GD++ R+DLVI KAK++N
Sbjct: 4 SEEELSRLFRVRKTLMEMLADRGYLVGEFEINMSKHQFLQKYGDNMKREDLVIQKAKRNN 63
Query: 574 PSDQIFVFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAVSQKY 395
S+QI+VFFP E KVGVK +K Y ERMK+E+VF+AILVVQQNLTPFAR+ I + +S K+
Sbjct: 64 SSEQIYVFFPEEAKVGVKTMKTYTERMKKEDVFQAILVVQQNLTPFARTCISE--ISTKF 121
Query: 394 HLEVFQEAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIARYHGL 215
HLEVFQEAELLVNI H+LVPEHQ L+ EEKK LL RY +KETQLPRIQ++DPIARY+GL
Sbjct: 122 HLEVFQEAELLVNIKNHVLVPEHQPLTPEEKKTLLERYTVKETQLPRIQITDPIARYYGL 181
Query: 214 RRGQVVKIIRPSETAGRYITYRYVI 140
+RGQVVKIIRPSETAGRYITYRYV+
Sbjct: 182 KRGQVVKIIRPSETAGRYITYRYVV 206
>ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Cicer arietinum]
Length = 206
Score = 284 bits (727), Expect = 4e-74
Identities = 139/203 (68%), Positives = 170/203 (83%)
Frame = -2
Query: 748 EESMRLFRIRKNTMEMLKERGYLVVDVELTMDFKQFKEKFGDSVNRDDLVISKAKKDNPS 569
EE RL+RIRK MEML++R YLV D E+ M QFKEK+G+++ R+DLVI+K KKD PS
Sbjct: 6 EEITRLYRIRKTVMEMLRDRNYLVGDFEINMSKHQFKEKYGENMKREDLVINKTKKDKPS 65
Query: 568 DQIFVFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAVSQKYHL 389
DQI+VFFP E KVGVK +K Y+ RM ENV+RAILV Q +LTPFAR+S+ + +S K+HL
Sbjct: 66 DQIYVFFPEEVKVGVKTMKTYINRMNSENVYRAILVCQTSLTPFARTSVAE--ISSKFHL 123
Query: 388 EVFQEAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIARYHGLRR 209
EVFQEAELLVNI H+LVPEHQVL+D EKK LL RY +KETQLPRIQ++DP+ARY+GL+R
Sbjct: 124 EVFQEAELLVNIKDHVLVPEHQVLTDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKR 183
Query: 208 GQVVKIIRPSETAGRYITYRYVI 140
GQVVKIIRPSETAGRY+TYR+V+
Sbjct: 184 GQVVKIIRPSETAGRYVTYRFVV 206
>ref|XP_009380333.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Musa acuminata subsp. malaccensis]
Length = 204
Score = 284 bits (726), Expect = 6e-74
Identities = 139/199 (69%), Positives = 174/199 (87%)
Frame = -2
Query: 736 RLFRIRKNTMEMLKERGYLVVDVELTMDFKQFKEKFGDSVNRDDLVISKAKKDNPSDQIF 557
RLFRIR+ M+ML++RGYLVVD E+ M F KFG+ V R+DL+I+K++K++P+DQI+
Sbjct: 8 RLFRIRRTVMQMLRDRGYLVVDFEINMTKLDFLHKFGEGVKREDLLINKSRKNDPTDQIY 67
Query: 556 VFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAVSQKYHLEVFQ 377
VFFPN+EKVG+KHIK+Y+E MK E+V RAILV+QQNLTPFA+S +Q+ +S KYHLEVFQ
Sbjct: 68 VFFPNDEKVGMKHIKKYVELMKAESVPRAILVLQQNLTPFAKSYLQE--LSPKYHLEVFQ 125
Query: 376 EAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIARYHGLRRGQVV 197
EAELLVNI H+LV EHQ+L++EEKK LL RY LKETQLPRIQ++DPIARY+GL+RGQVV
Sbjct: 126 EAELLVNIKDHVLVAEHQMLTNEEKKTLLERYTLKETQLPRIQVTDPIARYYGLKRGQVV 185
Query: 196 KIIRPSETAGRYITYRYVI 140
KIIRPSETAGRY+TYRYV+
Sbjct: 186 KIIRPSETAGRYVTYRYVV 204
>ref|XP_012477196.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Gossypium raimondii] gi|823154631|ref|XP_012477197.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A [Gossypium raimondii]
gi|728836967|gb|KHG16410.1| dna-directed rna polymerases
i, ii, and iii subunit rpabc1 [Gossypium arboreum]
gi|763759819|gb|KJB27150.1| hypothetical protein
B456_004G280900 [Gossypium raimondii]
gi|763759820|gb|KJB27151.1| hypothetical protein
B456_004G280900 [Gossypium raimondii]
gi|763759821|gb|KJB27152.1| hypothetical protein
B456_004G280900 [Gossypium raimondii]
Length = 206
Score = 283 bits (724), Expect = 1e-73
Identities = 141/205 (68%), Positives = 171/205 (83%)
Frame = -2
Query: 754 ASEESMRLFRIRKNTMEMLKERGYLVVDVELTMDFKQFKEKFGDSVNRDDLVISKAKKDN 575
+ +E RLFRIRK M+MLK+RGY V D E+ + +QF K+G+++ R+DLVI+K K+++
Sbjct: 4 SDDEIKRLFRIRKTVMQMLKDRGYFVGDFEINLSKQQFISKYGENMKREDLVINKTKRND 63
Query: 574 PSDQIFVFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAVSQKY 395
SDQI+VFFP E KVGVK +K Y RMK ENVFRAILVVQQNLTPFAR+ I + +S K+
Sbjct: 64 NSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINE--ISSKF 121
Query: 394 HLEVFQEAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIARYHGL 215
HLEVFQEAELLVN+ +H LVPEHQVL++EEKK LL RY +KETQLPRIQ+SDPIARY GL
Sbjct: 122 HLEVFQEAELLVNVKEHALVPEHQVLTNEEKKTLLHRYTVKETQLPRIQVSDPIARYFGL 181
Query: 214 RRGQVVKIIRPSETAGRYITYRYVI 140
+RGQVVKIIRPSETAGRYITYRYV+
Sbjct: 182 KRGQVVKIIRPSETAGRYITYRYVV 206
>ref|XP_009605258.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Nicotiana tomentosiformis]
gi|697192348|ref|XP_009605259.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like [Nicotiana
tomentosiformis]
Length = 206
Score = 283 bits (724), Expect = 1e-73
Identities = 141/205 (68%), Positives = 172/205 (83%)
Frame = -2
Query: 754 ASEESMRLFRIRKNTMEMLKERGYLVVDVELTMDFKQFKEKFGDSVNRDDLVISKAKKDN 575
+ EE RLFR+RK MEML +RGYLV + E+ M QF +K+GD++ R+DLVI KAK++N
Sbjct: 4 SEEELSRLFRVRKTLMEMLADRGYLVGEFEINMSKHQFLQKYGDNMKREDLVIQKAKRNN 63
Query: 574 PSDQIFVFFPNEEKVGVKHIKEYLERMKQENVFRAILVVQQNLTPFARSSIQDQAVSQKY 395
S+QI+VFFP E KVGVK +K Y ERMK+E+VF++ILVVQQNLTPFAR+ I + +S K+
Sbjct: 64 SSEQIYVFFPEEAKVGVKTMKTYTERMKKEDVFQSILVVQQNLTPFARTCISE--ISTKF 121
Query: 394 HLEVFQEAELLVNINKHMLVPEHQVLSDEEKKALLARYHLKETQLPRIQLSDPIARYHGL 215
HLEVFQEAELLVNI H+LVPEHQ L+ EEKK LL RY +KETQLPRIQ++DPIARY+GL
Sbjct: 122 HLEVFQEAELLVNIKNHVLVPEHQPLTPEEKKTLLERYTVKETQLPRIQITDPIARYYGL 181
Query: 214 RRGQVVKIIRPSETAGRYITYRYVI 140
+RGQVVKIIRPSETAGRYITYRYV+
Sbjct: 182 KRGQVVKIIRPSETAGRYITYRYVV 206