BLASTX nr result
ID: Anemarrhena21_contig00014365
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00014365
(1422 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010922117.1| PREDICTED: chloroplastic group IIA intron sp... 422 e-115
ref|XP_010922087.1| PREDICTED: chloroplastic group IIA intron sp... 422 e-115
ref|XP_009418130.1| PREDICTED: chloroplastic group IIA intron sp... 419 e-114
ref|XP_009418129.1| PREDICTED: chloroplastic group IIA intron sp... 414 e-113
ref|XP_008797623.1| PREDICTED: chloroplastic group IIA intron sp... 403 e-109
ref|XP_010660413.1| PREDICTED: chloroplastic group IIA intron sp... 365 5e-98
ref|XP_010660411.1| PREDICTED: chloroplastic group IIA intron sp... 365 5e-98
gb|ERN04039.1| hypothetical protein AMTR_s00079p00185530 [Ambore... 362 3e-97
ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron sp... 360 1e-96
ref|XP_007033221.1| maize chloroplast splicing factor CRS1, puta... 360 1e-96
ref|XP_007033220.1| maize chloroplast splicing factor CRS1, puta... 360 1e-96
ref|XP_007033219.1| maize chloroplast splicing factor CRS1, puta... 360 1e-96
ref|XP_007033218.1| maize chloroplast splicing factor CRS1, puta... 360 1e-96
ref|XP_007033217.1| maize chloroplast splicing factor CRS1, puta... 360 1e-96
ref|XP_010108863.1| Chloroplastic group IIA intron splicing faci... 355 5e-95
ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citr... 353 2e-94
ref|XP_010061906.1| PREDICTED: chloroplastic group IIA intron sp... 350 2e-93
ref|XP_010061904.1| PREDICTED: chloroplastic group IIA intron sp... 350 2e-93
gb|KHG25518.1| hypothetical protein F383_03195 [Gossypium arboreum] 347 1e-92
gb|KDO59071.1| hypothetical protein CISIN_1g041729mg [Citrus sin... 347 1e-92
>ref|XP_010922117.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X2 [Elaeis guineensis]
gi|743757471|ref|XP_010922126.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1, chloroplastic
isoform X2 [Elaeis guineensis]
Length = 783
Score = 422 bits (1084), Expect = e-115
Identities = 237/443 (53%), Positives = 288/443 (65%), Gaps = 30/443 (6%)
Frame = -1
Query: 1239 SSTQETKPSNIPIKVPTPPWMTSPFPLSPDQLLDLSQPKSK--PNNKTHQKTQSNAYKSL 1066
SS ++ P +K+PT PWM P L DQLLDLS P+ K P + +SL
Sbjct: 61 SSEKQPWPLAGAVKMPTAPWMRGPLLLPADQLLDLSNPRKKKPPGDGDDDDDHPARDRSL 120
Query: 1065 TEKVKGGRSRQAMKKIVRNIKDLRKI-----DEEAQEKAREPPLLPEMNGLGTNV----- 916
T+KV+GGR+RQAM+ I+R+I LR+I +E A +A P +N +G +
Sbjct: 121 TDKVRGGRNRQAMRGIIRSITKLREIHPMEEEENAIGEAESPEFSVPLN-IGDDEGRRQA 179
Query: 915 ---PWARAEERMVFRREKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAKKAGVTQEV 745
PW E+++VFRREKK R T A +WVKAKKAGVTQEV
Sbjct: 180 GRSPWMGVEKKLVFRREKKTRQPTAAELTLPGDVLVRLRGEARRMKKWVKAKKAGVTQEV 239
Query: 744 VNEIVKAWRKEELVMVRLVDPLRRNMDRAREIVEIKTGGLVVWSKKDALVVYHG-NYQST 568
V+EI + WRK EL MV+ V+PLRRNMDRA EI+E KTGGLVVW K+ LVVY G NY
Sbjct: 240 VDEIRRTWRKGELAMVKFVEPLRRNMDRAHEILETKTGGLVVWRKRYTLVVYRGSNYSLI 299
Query: 567 TEASQGSSPAFGGLSSPSALNLGIPAGTADG--------------SIIQKNIEAGNSLNT 430
EAS S+ GG +S S LNLGI + DG S+IQ++ + NS +
Sbjct: 300 PEASHNSAITIGGKASSSKLNLGI---SEDGGAILPTKSDEITNISVIQQDGDVENSHTS 356
Query: 429 SMDCAVHNGDGSMNESLYMREANRLLDGLGPRFIDWWWRKPLPIDADLLPEVVPEFKPPF 250
SM + N ++ +LY RE +RLLDGLGPRFIDWWWRKPLP+DADLLPE VP F+PP
Sbjct: 357 SMAWEIRNAAEAIEGTLYEREVDRLLDGLGPRFIDWWWRKPLPVDADLLPEFVPNFRPPI 416
Query: 249 RLCPPKERPTLRDDELTYLRKLARPLPTHFALGKNTKLQGVAAAIIKLWEKSLIAKIAIK 70
RLCPP +P L D+ELTYLRKLARPLPTHFALGK+ KLQG+AAAIIKLWEKSLIAKIA+K
Sbjct: 417 RLCPPSMKPKLMDEELTYLRKLARPLPTHFALGKSRKLQGLAAAIIKLWEKSLIAKIAVK 476
Query: 69 VGIPRTNNQQMAEELKRLTGGVV 1
VGIP NNQQM+ ELKRLTGGV+
Sbjct: 477 VGIPNINNQQMSCELKRLTGGVL 499
>ref|XP_010922087.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X1 [Elaeis guineensis]
gi|743757464|ref|XP_010922095.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1, chloroplastic
isoform X1 [Elaeis guineensis]
gi|743757467|ref|XP_010922108.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1, chloroplastic
isoform X1 [Elaeis guineensis]
Length = 796
Score = 422 bits (1084), Expect = e-115
Identities = 237/443 (53%), Positives = 288/443 (65%), Gaps = 30/443 (6%)
Frame = -1
Query: 1239 SSTQETKPSNIPIKVPTPPWMTSPFPLSPDQLLDLSQPKSK--PNNKTHQKTQSNAYKSL 1066
SS ++ P +K+PT PWM P L DQLLDLS P+ K P + +SL
Sbjct: 61 SSEKQPWPLAGAVKMPTAPWMRGPLLLPADQLLDLSNPRKKKPPGDGDDDDDHPARDRSL 120
Query: 1065 TEKVKGGRSRQAMKKIVRNIKDLRKI-----DEEAQEKAREPPLLPEMNGLGTNV----- 916
T+KV+GGR+RQAM+ I+R+I LR+I +E A +A P +N +G +
Sbjct: 121 TDKVRGGRNRQAMRGIIRSITKLREIHPMEEEENAIGEAESPEFSVPLN-IGDDEGRRQA 179
Query: 915 ---PWARAEERMVFRREKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAKKAGVTQEV 745
PW E+++VFRREKK R T A +WVKAKKAGVTQEV
Sbjct: 180 GRSPWMGVEKKLVFRREKKTRQPTAAELTLPGDVLVRLRGEARRMKKWVKAKKAGVTQEV 239
Query: 744 VNEIVKAWRKEELVMVRLVDPLRRNMDRAREIVEIKTGGLVVWSKKDALVVYHG-NYQST 568
V+EI + WRK EL MV+ V+PLRRNMDRA EI+E KTGGLVVW K+ LVVY G NY
Sbjct: 240 VDEIRRTWRKGELAMVKFVEPLRRNMDRAHEILETKTGGLVVWRKRYTLVVYRGSNYSLI 299
Query: 567 TEASQGSSPAFGGLSSPSALNLGIPAGTADG--------------SIIQKNIEAGNSLNT 430
EAS S+ GG +S S LNLGI + DG S+IQ++ + NS +
Sbjct: 300 PEASHNSAITIGGKASSSKLNLGI---SEDGGAILPTKSDEITNISVIQQDGDVENSHTS 356
Query: 429 SMDCAVHNGDGSMNESLYMREANRLLDGLGPRFIDWWWRKPLPIDADLLPEVVPEFKPPF 250
SM + N ++ +LY RE +RLLDGLGPRFIDWWWRKPLP+DADLLPE VP F+PP
Sbjct: 357 SMAWEIRNAAEAIEGTLYEREVDRLLDGLGPRFIDWWWRKPLPVDADLLPEFVPNFRPPI 416
Query: 249 RLCPPKERPTLRDDELTYLRKLARPLPTHFALGKNTKLQGVAAAIIKLWEKSLIAKIAIK 70
RLCPP +P L D+ELTYLRKLARPLPTHFALGK+ KLQG+AAAIIKLWEKSLIAKIA+K
Sbjct: 417 RLCPPSMKPKLMDEELTYLRKLARPLPTHFALGKSRKLQGLAAAIIKLWEKSLIAKIAVK 476
Query: 69 VGIPRTNNQQMAEELKRLTGGVV 1
VGIP NNQQM+ ELKRLTGGV+
Sbjct: 477 VGIPNINNQQMSCELKRLTGGVL 499
>ref|XP_009418130.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X2 [Musa acuminata subsp.
malaccensis]
Length = 768
Score = 419 bits (1076), Expect = e-114
Identities = 231/417 (55%), Positives = 276/417 (66%), Gaps = 16/417 (3%)
Frame = -1
Query: 1203 IKVPTPPWMTSPFPLSPDQLLDLSQPKSKPNNKTHQKTQSNAYKSLTEKVKGGRSRQAMK 1024
+K+PT PWMTSPF L DQ+LDLS P NK +K A + LT+KV+GGRSR AM
Sbjct: 81 LKMPTAPWMTSPFLLPSDQVLDLSNPSRSTRNK--KKVPGPADRPLTDKVRGGRSRHAML 138
Query: 1023 KIVRNIKDLRKI-----DEEAQEKAREP---------PLLPEMNGLGTNVPWARAEERMV 886
I+RNIK+LR++ DEE A PL P G G PW AEE++V
Sbjct: 139 GIIRNIKNLRQVHSAEPDEETPAAAFADAGQAAEFGVPLRPAKGGRGQRAPWVTAEEKLV 198
Query: 885 FRREKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAKKAGVTQEVVNEIVKAWRKEEL 706
F REKK +V T A RWVKAKKAGVTQ V+ EI + W++ EL
Sbjct: 199 FGREKKVKVVTSAESVLAPELLFRLRGEARRMTRWVKAKKAGVTQGVMEEIRRGWKENEL 258
Query: 705 VMVRLVDPLRRNMDRAREIVEIKTGGLVVWSKKDALVVYHGN-YQSTTEASQGSSPAFGG 529
VMVR+V+PLRRNMDRAREIVE KTGGLVVW K+D LVVY G Y+ A
Sbjct: 259 VMVRIVEPLRRNMDRAREIVETKTGGLVVWCKRDFLVVYRGQKYEMFRNAP--------- 309
Query: 528 LSSPSALNLGIPA-GTADGSIIQKNIEAGNSLNTSMDCAVHNGDGSMNESLYMREANRLL 352
SSP+A+N P D +I+ ++ + M+ + GD S+ SLY REA+RLL
Sbjct: 310 -SSPNAVNKVNPGIFEEDSAIVSGSVVKMDGEVQIMESGIQMGDISIEGSLYEREADRLL 368
Query: 351 DGLGPRFIDWWWRKPLPIDADLLPEVVPEFKPPFRLCPPKERPTLRDDELTYLRKLARPL 172
DGLGPRF+DWWW+KPLP+DADLLPEVVP F+PP R+CPP RP L DDEL YLRKLARPL
Sbjct: 369 DGLGPRFVDWWWQKPLPVDADLLPEVVPGFRPPLRMCPPGVRPKLTDDELMYLRKLARPL 428
Query: 171 PTHFALGKNTKLQGVAAAIIKLWEKSLIAKIAIKVGIPRTNNQQMAEELKRLTGGVV 1
PTHFALG+N KLQG+AA+I KLWEKSLIAKIA+KVGI TNN+QM+ ELKRLTGGV+
Sbjct: 429 PTHFALGRNRKLQGLAASIRKLWEKSLIAKIAVKVGIQNTNNEQMSLELKRLTGGVL 485
>ref|XP_009418129.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X1 [Musa acuminata subsp.
malaccensis]
Length = 769
Score = 414 bits (1064), Expect = e-113
Identities = 231/418 (55%), Positives = 276/418 (66%), Gaps = 17/418 (4%)
Frame = -1
Query: 1203 IKVPTPPWMTSPFPLSPDQLLDLSQPKSKPNNKTHQKTQSNAYKSLTEKVKGGRSRQAMK 1024
+K+PT PWMTSPF L DQ+LDLS P NK +K A + LT+KV+GGRSR AM
Sbjct: 81 LKMPTAPWMTSPFLLPSDQVLDLSNPSRSTRNK--KKVPGPADRPLTDKVRGGRSRHAML 138
Query: 1023 KIVRNIKDLRKI-----DEEAQEKAREP---------PLLPEMNGLGTNVPWARAEERMV 886
I+RNIK+LR++ DEE A PL P G G PW AEE++V
Sbjct: 139 GIIRNIKNLRQVHSAEPDEETPAAAFADAGQAAEFGVPLRPAKGGRGQRAPWVTAEEKLV 198
Query: 885 FRREKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAKKAGVTQEVVNEIVKAWRKEEL 706
F REKK +V T A RWVKAKKAGVTQ V+ EI + W++ EL
Sbjct: 199 FGREKKVKVVTSAESVLAPELLFRLRGEARRMTRWVKAKKAGVTQGVMEEIRRGWKENEL 258
Query: 705 VMVRLVDPLRRNMDRAREIVE-IKTGGLVVWSKKDALVVYHGN-YQSTTEASQGSSPAFG 532
VMVR+V+PLRRNMDRAREIVE KTGGLVVW K+D LVVY G Y+ A
Sbjct: 259 VMVRIVEPLRRNMDRAREIVEQTKTGGLVVWCKRDFLVVYRGQKYEMFRNAP-------- 310
Query: 531 GLSSPSALNLGIPA-GTADGSIIQKNIEAGNSLNTSMDCAVHNGDGSMNESLYMREANRL 355
SSP+A+N P D +I+ ++ + M+ + GD S+ SLY REA+RL
Sbjct: 311 --SSPNAVNKVNPGIFEEDSAIVSGSVVKMDGEVQIMESGIQMGDISIEGSLYEREADRL 368
Query: 354 LDGLGPRFIDWWWRKPLPIDADLLPEVVPEFKPPFRLCPPKERPTLRDDELTYLRKLARP 175
LDGLGPRF+DWWW+KPLP+DADLLPEVVP F+PP R+CPP RP L DDEL YLRKLARP
Sbjct: 369 LDGLGPRFVDWWWQKPLPVDADLLPEVVPGFRPPLRMCPPGVRPKLTDDELMYLRKLARP 428
Query: 174 LPTHFALGKNTKLQGVAAAIIKLWEKSLIAKIAIKVGIPRTNNQQMAEELKRLTGGVV 1
LPTHFALG+N KLQG+AA+I KLWEKSLIAKIA+KVGI TNN+QM+ ELKRLTGGV+
Sbjct: 429 LPTHFALGRNRKLQGLAASIRKLWEKSLIAKIAVKVGIQNTNNEQMSLELKRLTGGVL 486
>ref|XP_008797623.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Phoenix dactylifera]
Length = 810
Score = 403 bits (1036), Expect = e-109
Identities = 228/443 (51%), Positives = 283/443 (63%), Gaps = 30/443 (6%)
Frame = -1
Query: 1239 SSTQETKPSNIPIKVPTPPWMTSPFPLSPDQLLDLSQP-KSKPNNKTHQKTQSN----AY 1075
SS + P +K+P+ PWM P L DQ+LDLS P K KP + + +
Sbjct: 61 SSEKPPWPLAGAVKMPSAPWMRGPLLLPADQVLDLSNPHKKKPRGEGGDGGRGDDDPARD 120
Query: 1074 KSLTEKVKGGRSRQAMKKIVRNIKDLRKI-----DEEAQEKAREPPLLPEMN-------- 934
+SLT+KV+ GRSRQAM+ I+R+I L++I +E A +A P +N
Sbjct: 121 RSLTDKVRSGRSRQAMRGIIRSITKLQEIHPMEGEENATGEAESPEFSVPLNISDGEARW 180
Query: 933 GLGTNVPWARAEERMVFRREKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAKKAGVT 754
PW E+++VFRREKK R T A +WVKAKKAGVT
Sbjct: 181 RPSRRSPWVGVEKKLVFRREKKARQPTAAELTLTGDVLARLRGEARRMKKWVKAKKAGVT 240
Query: 753 QEVVNEIVKAWRKEELVMVRLVDPLRRNMDRAREIVEIKTGGLVVWSKKDALVVYHG-NY 577
QEVV+EI + W K EL MV+ V+PLRRNMDRA EI+E KTGGLVVW ++D LVV+ G NY
Sbjct: 241 QEVVDEIRRTWSKGELAMVKFVEPLRRNMDRAHEILETKTGGLVVWHRRDTLVVHRGSNY 300
Query: 576 QSTTEASQGSSPAFGGLSSPSALNLGI-------PAGTADG----SIIQKNIEAGNSLNT 430
EAS S+ GG +S S LNLGI P D S+IQ++ + N+ +
Sbjct: 301 SLVPEASHNSAITIGGEASSSKLNLGISEDGGAIPPTKCDEITNISVIQQDGDIENTHTS 360
Query: 429 SMDCAVHNGDGSMNESLYMREANRLLDGLGPRFIDWWWRKPLPIDADLLPEVVPEFKPPF 250
+M+ + N ++ +LY RE +RLLDGLGPRFIDWWWRKPLP+DADLLPE VP F+PPF
Sbjct: 361 NMEWEIQNAAEAIKGTLYEREVDRLLDGLGPRFIDWWWRKPLPVDADLLPEFVPNFRPPF 420
Query: 249 RLCPPKERPTLRDDELTYLRKLARPLPTHFALGKNTKLQGVAAAIIKLWEKSLIAKIAIK 70
RLCPP + L D+ELTYLRKLA PLPTHFALGK KLQG+AAAIIKLWEKSLIAKIA+K
Sbjct: 421 RLCPPLMKAKLTDEELTYLRKLAHPLPTHFALGKIRKLQGLAAAIIKLWEKSLIAKIAVK 480
Query: 69 VGIPRTNNQQMAEELKRLTGGVV 1
VGIP NN+QM+ ELKRLTGGV+
Sbjct: 481 VGIPNINNKQMSCELKRLTGGVL 503
>ref|XP_010660413.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X2 [Vitis vinifera]
Length = 789
Score = 365 bits (937), Expect = 5e-98
Identities = 217/444 (48%), Positives = 268/444 (60%), Gaps = 32/444 (7%)
Frame = -1
Query: 1236 STQETKPSNIPIKVPTPPWMTSPFPLSPDQLLDLSQPKSKPNNKTHQKTQSNAYKSLTEK 1057
S+Q ++ IK+PT PWM P L P+++LDLS K++P +SLTEK
Sbjct: 62 SSQPVSGTDAAIKMPTAPWMKGPLLLQPNEVLDLS--KARPKKVAGSAGAEKPDRSLTEK 119
Query: 1056 VKGGRSRQAMKKIVRNIKDLRKI--DEEAQEKAREPPLLPEMNGLGTN--------VPWA 907
V GGR +AMKKI+++I L++ +E QE E + G+G + +PW
Sbjct: 120 VSGGRGAKAMKKIMQSIVKLQETHTSDETQENTEEFEFGVSLEGIGGDENSRIGGKMPWL 179
Query: 906 RAEERMVFRREKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAKKAGVTQEVVNEIVK 727
+ E ++VFRR KKE+V T A +WVK KKAGVT+ VV++I
Sbjct: 180 KTE-KVVFRRTKKEKVVTAAELTLDPMLLERLRGEAVKMRKWVKVKKAGVTESVVDQIHM 238
Query: 726 AWRKEELVMVRLVDPLRRNMDRAREIVEIKTGGLVVWSKKDALVVYHG-NYQSTTEASQG 550
W+ +EL MV+ PL RNMDRAREI+EIKT GLV+WSKKD LVVY G NYQST++ Q
Sbjct: 239 VWKSDELAMVKFDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRGSNYQSTSKHFQK 298
Query: 549 SSPAF--GGLSSPSALN-------------------LGIPAGTADGSIIQKNIEAGNSLN 433
P G +S S LN G G DG + + G +
Sbjct: 299 MRPGLVAGADASNSKLNQSNFEDDLTISEIKFHESTTGEKMGRKDGE--EDSSPTGIFME 356
Query: 432 TSMDCAVHNGDGSMNESLYMREANRLLDGLGPRFIDWWWRKPLPIDADLLPEVVPEFKPP 253
+D NG SLY REA+RLLDGLGPRFIDWW KPLP+DADLLPEV+P F+PP
Sbjct: 357 EMVDSQPVNG------SLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPP 410
Query: 252 FRLCPPKERPTLRDDELTYLRKLARPLPTHFALGKNTKLQGVAAAIIKLWEKSLIAKIAI 73
FRL PP+ R L DDELTYLRKLA LPTHF LG+N KLQG+AAAI+KLWEKSLI KIAI
Sbjct: 411 FRLSPPQTRSKLTDDELTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAI 470
Query: 72 KVGIPRTNNQQMAEELKRLTGGVV 1
K GIP T N+QMA ELK LTGGV+
Sbjct: 471 KWGIPNTKNEQMANELKCLTGGVL 494
>ref|XP_010660411.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X1 [Vitis vinifera]
gi|731417745|ref|XP_010660412.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1, chloroplastic
isoform X1 [Vitis vinifera]
Length = 828
Score = 365 bits (937), Expect = 5e-98
Identities = 217/444 (48%), Positives = 268/444 (60%), Gaps = 32/444 (7%)
Frame = -1
Query: 1236 STQETKPSNIPIKVPTPPWMTSPFPLSPDQLLDLSQPKSKPNNKTHQKTQSNAYKSLTEK 1057
S+Q ++ IK+PT PWM P L P+++LDLS K++P +SLTEK
Sbjct: 62 SSQPVSGTDAAIKMPTAPWMKGPLLLQPNEVLDLS--KARPKKVAGSAGAEKPDRSLTEK 119
Query: 1056 VKGGRSRQAMKKIVRNIKDLRKI--DEEAQEKAREPPLLPEMNGLGTN--------VPWA 907
V GGR +AMKKI+++I L++ +E QE E + G+G + +PW
Sbjct: 120 VSGGRGAKAMKKIMQSIVKLQETHTSDETQENTEEFEFGVSLEGIGGDENSRIGGKMPWL 179
Query: 906 RAEERMVFRREKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAKKAGVTQEVVNEIVK 727
+ E ++VFRR KKE+V T A +WVK KKAGVT+ VV++I
Sbjct: 180 KTE-KVVFRRTKKEKVVTAAELTLDPMLLERLRGEAVKMRKWVKVKKAGVTESVVDQIHM 238
Query: 726 AWRKEELVMVRLVDPLRRNMDRAREIVEIKTGGLVVWSKKDALVVYHG-NYQSTTEASQG 550
W+ +EL MV+ PL RNMDRAREI+EIKT GLV+WSKKD LVVY G NYQST++ Q
Sbjct: 239 VWKSDELAMVKFDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRGSNYQSTSKHFQK 298
Query: 549 SSPAF--GGLSSPSALN-------------------LGIPAGTADGSIIQKNIEAGNSLN 433
P G +S S LN G G DG + + G +
Sbjct: 299 MRPGLVAGADASNSKLNQSNFEDDLTISEIKFHESTTGEKMGRKDGE--EDSSPTGIFME 356
Query: 432 TSMDCAVHNGDGSMNESLYMREANRLLDGLGPRFIDWWWRKPLPIDADLLPEVVPEFKPP 253
+D NG SLY REA+RLLDGLGPRFIDWW KPLP+DADLLPEV+P F+PP
Sbjct: 357 EMVDSQPVNG------SLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPP 410
Query: 252 FRLCPPKERPTLRDDELTYLRKLARPLPTHFALGKNTKLQGVAAAIIKLWEKSLIAKIAI 73
FRL PP+ R L DDELTYLRKLA LPTHF LG+N KLQG+AAAI+KLWEKSLI KIAI
Sbjct: 411 FRLSPPQTRSKLTDDELTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAI 470
Query: 72 KVGIPRTNNQQMAEELKRLTGGVV 1
K GIP T N+QMA ELK LTGGV+
Sbjct: 471 KWGIPNTKNEQMANELKCLTGGVL 494
>gb|ERN04039.1| hypothetical protein AMTR_s00079p00185530 [Amborella trichopoda]
Length = 886
Score = 362 bits (930), Expect = 3e-97
Identities = 212/440 (48%), Positives = 259/440 (58%), Gaps = 39/440 (8%)
Frame = -1
Query: 1203 IKVPTPPWMTSPFPLSPDQLLDLSQPKSKPNNKTHQKTQSNAYKSLTEKVKGGRSRQAMK 1024
+K+PT PWM P L D +LDLS+ + K +N+ + K+LT V+GGRS+ AM+
Sbjct: 181 VKMPTAPWMRGPLLLPADDVLDLSKSRKKSSNEMNSDD-----KALTGGVRGGRSKHAMR 235
Query: 1023 KIVRNIKDLRKIDEEAQEKAREPPLLP--------------------------------- 943
I+ NI L++I EE ++K +L
Sbjct: 236 LIMENITKLKEIHEENEQKKETHIVLSDEVDIRSKINSSFSEGATKSIEAGFNLPLKEVS 295
Query: 942 --EMNGLGTNVPWARAEERMVFRREKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAK 769
E + T +PW AE+ VFRR KKE+ TKA +WVK K
Sbjct: 296 VSEDQAMETKLPWTMAEKN-VFRRVKKEKTPTKAELSLPKPLLTRLRDRGRTLTKWVKVK 354
Query: 768 KAGVTQEVVNEIVKAWRKEELVMVRLVDPLRRNMDRAREIVEIKTGGLVVWSKKDALVVY 589
KAGVTQEV+NEI W+K EL M++ PL RNMDRA EIVE KTGGLVVW KK LVVY
Sbjct: 355 KAGVTQEVMNEIYAVWKKRELAMLKFDVPLCRNMDRATEIVETKTGGLVVWRKKGTLVVY 414
Query: 588 HG-NYQSTTEASQGSSPAFGGLSSPSALNLGIPAGTADGSIIQKNIEAGNS-LNTSMDCA 415
G NY S ++ S+ ++P +L L I A N LN D
Sbjct: 415 RGTNYHSLSKTSE---------TNPWSLEL----------FDDNKISAPNGFLNFKDDTM 455
Query: 414 VHNG--DGSMNESLYMREANRLLDGLGPRFIDWWWRKPLPIDADLLPEVVPEFKPPFRLC 241
++ DG M E+L+ REANRLLD LGPRFIDWWW PLP+DADLLPEV+P F+PP RLC
Sbjct: 456 IYQAGSDGLMKETLFEREANRLLDELGPRFIDWWWSTPLPVDADLLPEVIPNFRPPLRLC 515
Query: 240 PPKERPTLRDDELTYLRKLARPLPTHFALGKNTKLQGVAAAIIKLWEKSLIAKIAIKVGI 61
PP + L D+ELTYLRK A+ LPTHFALGKNTKLQG+AAAI+KLWEKSLIAKIAIK GI
Sbjct: 516 PPHMQSKLTDEELTYLRKFAKHLPTHFALGKNTKLQGLAAAILKLWEKSLIAKIAIKWGI 575
Query: 60 PRTNNQQMAEELKRLTGGVV 1
P N+QQMA ELK LTGGV+
Sbjct: 576 PNVNHQQMAYELKHLTGGVL 595
>ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568857343|ref|XP_006482226.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X2 [Citrus sinensis]
Length = 771
Score = 360 bits (925), Expect = 1e-96
Identities = 221/430 (51%), Positives = 270/430 (62%), Gaps = 26/430 (6%)
Frame = -1
Query: 1212 NIPIK-VPTPPWMTSPFPLSPDQLLDLSQPKSKPNNKTHQKTQSNAYKSLTEKVKGGRSR 1036
N PIK +PT PWM SP L PD+++ S+PK+K K+ +KT K LT K G R +
Sbjct: 49 NAPIKKMPTAPWMRSPIVLQPDEIIKPSKPKTK---KSFKKTD----KGLTAKESGVRGK 101
Query: 1035 QAMKKIVRNIKDLRK--IDEEAQEKAREPPLLP---EMN---------GLGTNVPWARAE 898
QAMKKI+ NI+ L+K I +E Q+K E E N G G VPW R E
Sbjct: 102 QAMKKIIENIEKLQKDQILDETQKKVMEKFEFKGCFEENVSHEEDLRGGFGGKVPWLR-E 160
Query: 897 ERMVFRREKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAKKAGVTQEVVNEIVKAWR 718
+R VFRR KKER+ TKA +WVK KKAGVT+ VV EI AWR
Sbjct: 161 DRFVFRRMKKERMVTKAETMLDGELLERLKDEARKMRKWVKVKKAGVTESVVFEIRLAWR 220
Query: 717 KEELVMVRLVDPLRRNMDRAREIVEIKTGGLVVWSKKDALVVYHGNYQ--STTEASQGSS 544
+ EL MV+ PL RNMDRAREI+E+KTGGLV+W+KKDA VVY G+ S + +
Sbjct: 221 RNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDAHVVYRGDSSKSSVKMCPRSAD 280
Query: 543 PAFGGLSSPSALNLG-------IPAGTA--DGSIIQKNIEAGNSLNTSMDCAVHNGDGSM 391
LS + L+L I + TA D + K+ E NSL TS+ + + +
Sbjct: 281 DQEAPLSKSTHLHLEKKVNVSWIKSNTATLDQNRSLKDGEE-NSLPTSI---FMDKNLRI 336
Query: 390 NESLYMREANRLLDGLGPRFIDWWWRKPLPIDADLLPEVVPEFKPPFRLCPPKERPTLRD 211
++SLY RE +RLLDGLGPRF+DWW KPLP+D DLLPEVVP FKPPFRL PP R L D
Sbjct: 337 DKSLYEREGDRLLDGLGPRFVDWWMWKPLPVDGDLLPEVVPGFKPPFRLSPPDARSKLTD 396
Query: 210 DELTYLRKLARPLPTHFALGKNTKLQGVAAAIIKLWEKSLIAKIAIKVGIPRTNNQQMAE 31
DELTYLRKLA PLPTHF LG+N LQG+A AI+KLWEKSL+AKI +K GIP T+N+QMA
Sbjct: 397 DELTYLRKLAHPLPTHFVLGRNRGLQGLATAILKLWEKSLVAKITVKWGIPNTDNEQMAN 456
Query: 30 ELKRLTGGVV 1
ELK LTGGV+
Sbjct: 457 ELKHLTGGVL 466
>ref|XP_007033221.1| maize chloroplast splicing factor CRS1, putative isoform 5 [Theobroma
cacao] gi|508712250|gb|EOY04147.1| maize chloroplast
splicing factor CRS1, putative isoform 5 [Theobroma
cacao]
Length = 788
Score = 360 bits (925), Expect = 1e-96
Identities = 210/434 (48%), Positives = 263/434 (60%), Gaps = 28/434 (6%)
Frame = -1
Query: 1218 PSNIPIKVPTPPWMTSPFPLSPDQLLDLSQPKSKPNNKTHQKTQSNAYKSLTEKVKGGRS 1039
P+N PIK+PT PWM P L P ++L+ S+ SK ++ + K K+L K G R
Sbjct: 83 PNNGPIKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSKAKAPD---KALFGKESGVRG 139
Query: 1038 RQAMKKIVRNIKDLR--KIDEEAQEKAREP----PLLPEMNGLGT------NVPWARAEE 895
++ MKKI+RN++ L+ ++ E+ Q RE L E G +PW R EE
Sbjct: 140 KKVMKKIIRNVEMLQGNEVLEDTQIGIREEFEVGNWLEEFGSDGEVKRFDGKMPWLREEE 199
Query: 894 RMVFRREKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAKKAGVTQEVVNEIVKAWRK 715
++VFRR KKE++ T+A +W+K K GVT+ VV+EI AWRK
Sbjct: 200 KVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRK 259
Query: 714 EELVMVRLVDPLRRNMDRAREIVEIKTGGLVVWSKKDALVVYHG------------NYQS 571
ELVMV+ PL RNMDRAREI+E+KT GLVVW KKDALVVY G Y
Sbjct: 260 NELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSKISSMKYPR 319
Query: 570 TTEASQGSSPAFGGLSSPSALNLGIPAGTADGSIIQKNIEAGNSLNTSMDCAVHNGDGSM 391
+ + SS F L+S + +N+ + +GS +Q + + SM + +
Sbjct: 320 CADGQEISSSTFSHLTSSNNINMSLEK--FNGSTLQSGLYREDREKESMPINIFMKEDEN 377
Query: 390 NE----SLYMREANRLLDGLGPRFIDWWWRKPLPIDADLLPEVVPEFKPPFRLCPPKERP 223
N+ SLY RE +RLLDGLGPRFIDWW RKPLPIDADLLPE VP F+PP RL PP RP
Sbjct: 378 NQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRP 437
Query: 222 TLRDDELTYLRKLARPLPTHFALGKNTKLQGVAAAIIKLWEKSLIAKIAIKVGIPRTNNQ 43
L DDEL YLRKL PLP HFALGKN LQG+AAAI+KLWEKSLIAKIAIK GI T+N+
Sbjct: 438 NLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNE 497
Query: 42 QMAEELKRLTGGVV 1
QMA ELK LTGGV+
Sbjct: 498 QMAYELKNLTGGVL 511
>ref|XP_007033220.1| maize chloroplast splicing factor CRS1, putative isoform 4 [Theobroma
cacao] gi|508712249|gb|EOY04146.1| maize chloroplast
splicing factor CRS1, putative isoform 4 [Theobroma
cacao]
Length = 767
Score = 360 bits (925), Expect = 1e-96
Identities = 210/434 (48%), Positives = 263/434 (60%), Gaps = 28/434 (6%)
Frame = -1
Query: 1218 PSNIPIKVPTPPWMTSPFPLSPDQLLDLSQPKSKPNNKTHQKTQSNAYKSLTEKVKGGRS 1039
P+N PIK+PT PWM P L P ++L+ S+ SK ++ + K K+L K G R
Sbjct: 57 PNNGPIKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSKAKAPD---KALFGKESGVRG 113
Query: 1038 RQAMKKIVRNIKDLR--KIDEEAQEKAREP----PLLPEMNGLGT------NVPWARAEE 895
++ MKKI+RN++ L+ ++ E+ Q RE L E G +PW R EE
Sbjct: 114 KKVMKKIIRNVEMLQGNEVLEDTQIGIREEFEVGNWLEEFGSDGEVKRFDGKMPWLREEE 173
Query: 894 RMVFRREKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAKKAGVTQEVVNEIVKAWRK 715
++VFRR KKE++ T+A +W+K K GVT+ VV+EI AWRK
Sbjct: 174 KVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRK 233
Query: 714 EELVMVRLVDPLRRNMDRAREIVEIKTGGLVVWSKKDALVVYHG------------NYQS 571
ELVMV+ PL RNMDRAREI+E+KT GLVVW KKDALVVY G Y
Sbjct: 234 NELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSKISSMKYPR 293
Query: 570 TTEASQGSSPAFGGLSSPSALNLGIPAGTADGSIIQKNIEAGNSLNTSMDCAVHNGDGSM 391
+ + SS F L+S + +N+ + +GS +Q + + SM + +
Sbjct: 294 CADGQEISSSTFSHLTSSNNINMSLEK--FNGSTLQSGLYREDREKESMPINIFMKEDEN 351
Query: 390 NE----SLYMREANRLLDGLGPRFIDWWWRKPLPIDADLLPEVVPEFKPPFRLCPPKERP 223
N+ SLY RE +RLLDGLGPRFIDWW RKPLPIDADLLPE VP F+PP RL PP RP
Sbjct: 352 NQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRP 411
Query: 222 TLRDDELTYLRKLARPLPTHFALGKNTKLQGVAAAIIKLWEKSLIAKIAIKVGIPRTNNQ 43
L DDEL YLRKL PLP HFALGKN LQG+AAAI+KLWEKSLIAKIAIK GI T+N+
Sbjct: 412 NLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNE 471
Query: 42 QMAEELKRLTGGVV 1
QMA ELK LTGGV+
Sbjct: 472 QMAYELKNLTGGVL 485
>ref|XP_007033219.1| maize chloroplast splicing factor CRS1, putative isoform 3 [Theobroma
cacao] gi|508712248|gb|EOY04145.1| maize chloroplast
splicing factor CRS1, putative isoform 3 [Theobroma
cacao]
Length = 788
Score = 360 bits (925), Expect = 1e-96
Identities = 210/434 (48%), Positives = 263/434 (60%), Gaps = 28/434 (6%)
Frame = -1
Query: 1218 PSNIPIKVPTPPWMTSPFPLSPDQLLDLSQPKSKPNNKTHQKTQSNAYKSLTEKVKGGRS 1039
P+N PIK+PT PWM P L P ++L+ S+ SK ++ + K K+L K G R
Sbjct: 57 PNNGPIKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSKAKAPD---KALFGKESGVRG 113
Query: 1038 RQAMKKIVRNIKDLR--KIDEEAQEKAREP----PLLPEMNGLGT------NVPWARAEE 895
++ MKKI+RN++ L+ ++ E+ Q RE L E G +PW R EE
Sbjct: 114 KKVMKKIIRNVEMLQGNEVLEDTQIGIREEFEVGNWLEEFGSDGEVKRFDGKMPWLREEE 173
Query: 894 RMVFRREKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAKKAGVTQEVVNEIVKAWRK 715
++VFRR KKE++ T+A +W+K K GVT+ VV+EI AWRK
Sbjct: 174 KVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRK 233
Query: 714 EELVMVRLVDPLRRNMDRAREIVEIKTGGLVVWSKKDALVVYHG------------NYQS 571
ELVMV+ PL RNMDRAREI+E+KT GLVVW KKDALVVY G Y
Sbjct: 234 NELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSKISSMKYPR 293
Query: 570 TTEASQGSSPAFGGLSSPSALNLGIPAGTADGSIIQKNIEAGNSLNTSMDCAVHNGDGSM 391
+ + SS F L+S + +N+ + +GS +Q + + SM + +
Sbjct: 294 CADGQEISSSTFSHLTSSNNINMSLEK--FNGSTLQSGLYREDREKESMPINIFMKEDEN 351
Query: 390 NE----SLYMREANRLLDGLGPRFIDWWWRKPLPIDADLLPEVVPEFKPPFRLCPPKERP 223
N+ SLY RE +RLLDGLGPRFIDWW RKPLPIDADLLPE VP F+PP RL PP RP
Sbjct: 352 NQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRP 411
Query: 222 TLRDDELTYLRKLARPLPTHFALGKNTKLQGVAAAIIKLWEKSLIAKIAIKVGIPRTNNQ 43
L DDEL YLRKL PLP HFALGKN LQG+AAAI+KLWEKSLIAKIAIK GI T+N+
Sbjct: 412 NLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNE 471
Query: 42 QMAEELKRLTGGVV 1
QMA ELK LTGGV+
Sbjct: 472 QMAYELKNLTGGVL 485
>ref|XP_007033218.1| maize chloroplast splicing factor CRS1, putative isoform 2 [Theobroma
cacao] gi|508712247|gb|EOY04144.1| maize chloroplast
splicing factor CRS1, putative isoform 2 [Theobroma
cacao]
Length = 804
Score = 360 bits (925), Expect = 1e-96
Identities = 210/434 (48%), Positives = 263/434 (60%), Gaps = 28/434 (6%)
Frame = -1
Query: 1218 PSNIPIKVPTPPWMTSPFPLSPDQLLDLSQPKSKPNNKTHQKTQSNAYKSLTEKVKGGRS 1039
P+N PIK+PT PWM P L P ++L+ S+ SK ++ + K K+L K G R
Sbjct: 83 PNNGPIKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSKAKAPD---KALFGKESGVRG 139
Query: 1038 RQAMKKIVRNIKDLR--KIDEEAQEKAREP----PLLPEMNGLGT------NVPWARAEE 895
++ MKKI+RN++ L+ ++ E+ Q RE L E G +PW R EE
Sbjct: 140 KKVMKKIIRNVEMLQGNEVLEDTQIGIREEFEVGNWLEEFGSDGEVKRFDGKMPWLREEE 199
Query: 894 RMVFRREKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAKKAGVTQEVVNEIVKAWRK 715
++VFRR KKE++ T+A +W+K K GVT+ VV+EI AWRK
Sbjct: 200 KVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRK 259
Query: 714 EELVMVRLVDPLRRNMDRAREIVEIKTGGLVVWSKKDALVVYHG------------NYQS 571
ELVMV+ PL RNMDRAREI+E+KT GLVVW KKDALVVY G Y
Sbjct: 260 NELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSKISSMKYPR 319
Query: 570 TTEASQGSSPAFGGLSSPSALNLGIPAGTADGSIIQKNIEAGNSLNTSMDCAVHNGDGSM 391
+ + SS F L+S + +N+ + +GS +Q + + SM + +
Sbjct: 320 CADGQEISSSTFSHLTSSNNINMSLEK--FNGSTLQSGLYREDREKESMPINIFMKEDEN 377
Query: 390 NE----SLYMREANRLLDGLGPRFIDWWWRKPLPIDADLLPEVVPEFKPPFRLCPPKERP 223
N+ SLY RE +RLLDGLGPRFIDWW RKPLPIDADLLPE VP F+PP RL PP RP
Sbjct: 378 NQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRP 437
Query: 222 TLRDDELTYLRKLARPLPTHFALGKNTKLQGVAAAIIKLWEKSLIAKIAIKVGIPRTNNQ 43
L DDEL YLRKL PLP HFALGKN LQG+AAAI+KLWEKSLIAKIAIK GI T+N+
Sbjct: 438 NLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNE 497
Query: 42 QMAEELKRLTGGVV 1
QMA ELK LTGGV+
Sbjct: 498 QMAYELKNLTGGVL 511
>ref|XP_007033217.1| maize chloroplast splicing factor CRS1, putative isoform 1 [Theobroma
cacao] gi|508712246|gb|EOY04143.1| maize chloroplast
splicing factor CRS1, putative isoform 1 [Theobroma
cacao]
Length = 818
Score = 360 bits (925), Expect = 1e-96
Identities = 210/434 (48%), Positives = 263/434 (60%), Gaps = 28/434 (6%)
Frame = -1
Query: 1218 PSNIPIKVPTPPWMTSPFPLSPDQLLDLSQPKSKPNNKTHQKTQSNAYKSLTEKVKGGRS 1039
P+N PIK+PT PWM P L P ++L+ S+ SK ++ + K K+L K G R
Sbjct: 83 PNNGPIKMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSKAKAPD---KALFGKESGVRG 139
Query: 1038 RQAMKKIVRNIKDLR--KIDEEAQEKAREP----PLLPEMNGLGT------NVPWARAEE 895
++ MKKI+RN++ L+ ++ E+ Q RE L E G +PW R EE
Sbjct: 140 KKVMKKIIRNVEMLQGNEVLEDTQIGIREEFEVGNWLEEFGSDGEVKRFDGKMPWLREEE 199
Query: 894 RMVFRREKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAKKAGVTQEVVNEIVKAWRK 715
++VFRR KKE++ T+A +W+K K GVT+ VV+EI AWRK
Sbjct: 200 KVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRK 259
Query: 714 EELVMVRLVDPLRRNMDRAREIVEIKTGGLVVWSKKDALVVYHG------------NYQS 571
ELVMV+ PL RNMDRAREI+E+KT GLVVW KKDALVVY G Y
Sbjct: 260 NELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSKISSMKYPR 319
Query: 570 TTEASQGSSPAFGGLSSPSALNLGIPAGTADGSIIQKNIEAGNSLNTSMDCAVHNGDGSM 391
+ + SS F L+S + +N+ + +GS +Q + + SM + +
Sbjct: 320 CADGQEISSSTFSHLTSSNNINMSLEK--FNGSTLQSGLYREDREKESMPINIFMKEDEN 377
Query: 390 NE----SLYMREANRLLDGLGPRFIDWWWRKPLPIDADLLPEVVPEFKPPFRLCPPKERP 223
N+ SLY RE +RLLDGLGPRFIDWW RKPLPIDADLLPE VP F+PP RL PP RP
Sbjct: 378 NQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRP 437
Query: 222 TLRDDELTYLRKLARPLPTHFALGKNTKLQGVAAAIIKLWEKSLIAKIAIKVGIPRTNNQ 43
L DDEL YLRKL PLP HFALGKN LQG+AAAI+KLWEKSLIAKIAIK GI T+N+
Sbjct: 438 NLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNE 497
Query: 42 QMAEELKRLTGGVV 1
QMA ELK LTGGV+
Sbjct: 498 QMAYELKNLTGGVL 511
>ref|XP_010108863.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
notabilis] gi|587933540|gb|EXC20503.1| Chloroplastic
group IIA intron splicing facilitator CRS1 [Morus
notabilis]
Length = 828
Score = 355 bits (911), Expect = 5e-95
Identities = 201/439 (45%), Positives = 267/439 (60%), Gaps = 27/439 (6%)
Frame = -1
Query: 1242 TSSTQETKPSNIPIKVPTPPWMTSPFPLSPDQLLDLSQPKSKPNNKTHQKTQSNAYKSLT 1063
T ++KP PIK+PTPPWM P L P ++ DLS+P++ +NK + + LT
Sbjct: 49 TKENPDSKPPLEPIKMPTPPWMKGPLVLQPHEVTDLSKPEN--DNKFSNRKAEKSVNGLT 106
Query: 1062 EKVKGGRSRQAMKKIVRNIKDL---RKIDEEAQEK--AREPPLLPEMNGLGTN------V 916
+K+ G R + +KKI R I++L K+D E +K + + + GLG + +
Sbjct: 107 DKLVGRRGKNVIKKIARRIEELGRKSKVDSEETQKDFVGKNGIGDCLEGLGESRSGGERM 166
Query: 915 PWARAEERMVFRREKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAKKAGVTQEVVNE 736
PW + +E VFRR KKE++ + A +WVK KKAGVT+EVV +
Sbjct: 167 PWEK-DEGFVFRRMKKEKIVSSAELRLERELLERLRSEARKMRKWVKVKKAGVTKEVVED 225
Query: 735 IVKAWRKEELVMVRLVDPLRRNMDRAREIVEIKTGGLVVWSKKDALVVYHG-NYQSTTEA 559
+ W+ EL MV+ PL RNMDRA+EI+E+KTGGLVVW +KDA V+Y G NYQ T++
Sbjct: 226 VKFVWKSNELAMVKFDVPLCRNMDRAQEILEMKTGGLVVWRRKDAQVIYRGCNYQPTSKT 285
Query: 558 SQGSSPAFGGLSSPSALNLGIPAGTADGSI---------IQKNIEAGNSLNTSMDCAV-- 412
+ F G NL S+ I++ I N+ ++ A+
Sbjct: 286 FPRTYAGFSGHQETPFSNLVQLDSRKGNSVSEVKSYENTIERKISKKNTEGETIPTAIIL 345
Query: 411 -HNGDGSMNESLYMREANRLLDGLGPRFIDWWWRKPLPIDADLLPEVVPEFKPPFRLCPP 235
++ + + SLY+REA+RLLDGLGPRFIDWW KPLP+DADLLPEVVP F+PPFR CPP
Sbjct: 346 KNDANFQPSSSLYVREADRLLDGLGPRFIDWWMNKPLPVDADLLPEVVPGFRPPFRRCPP 405
Query: 234 KERPTLRDDELTYLRKLARPLPTHFALGKNTKLQGVAAAIIKLWEKSLIAKIAIKVGIPR 55
R L D+ELTYLRKLA LPTHF LG+N KLQG+AAAI+KLWEK IAKIA+K+G+P
Sbjct: 406 HTRSKLTDEELTYLRKLAHSLPTHFVLGRNRKLQGLAAAILKLWEKCHIAKIAVKLGVPN 465
Query: 54 TNNQQMAEELKR---LTGG 7
TNN+QMA ELK LTGG
Sbjct: 466 TNNEQMAYELKARICLTGG 484
>ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citrus clementina]
gi|557532797|gb|ESR43980.1| hypothetical protein
CICLE_v10013368mg [Citrus clementina]
Length = 770
Score = 353 bits (905), Expect = 2e-94
Identities = 223/443 (50%), Positives = 271/443 (61%), Gaps = 39/443 (8%)
Frame = -1
Query: 1212 NIPIK-VPTPPWMTSPFPLSPDQLLDLSQPKSKPNNKTHQKTQSNAYKSLTEKVKGGRSR 1036
N PIK +PT PWM SP L PD+++ S+PK+K K+ +KT K LT K G R +
Sbjct: 55 NAPIKKMPTAPWMRSPIVLQPDEIIKPSKPKTK---KSFKKTD----KGLTAKESGVRGK 107
Query: 1035 QAMKKIVRNIKDLRK--IDEEAQEKAREPPLLP---EMNG---------LGTNVPWARAE 898
QAMKKI+ NI+ L+K I +E Q+K E E NG G VPW R E
Sbjct: 108 QAMKKIIENIEKLQKDQILDETQKKDMEKFEFRGCFEENGSDEEDLRGGFGGKVPWLR-E 166
Query: 897 ERMVFRREKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAKKAGVTQEVVNEIVKAWR 718
ER VFRR KKER+ TKA +WVK KKAGVT+ VV EI AWR
Sbjct: 167 ERFVFRRMKKERMVTKAETMLDGELIERLKDEARKMRKWVKVKKAGVTESVVFEIRLAWR 226
Query: 717 KEELVMVRLVDPLRRNMDRAREIVEIKTGGLVVWSKKDALVVYHGN--YQSTTEASQGSS 544
+ EL MV+ PL RNMDRAREI+E+KTGGLV+W+KKDA VVY G+ S + +
Sbjct: 227 RNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDAHVVYRGDGSKSSVKMCPRSAD 286
Query: 543 PAFGGLSSPSALNLG-------IPAGTA--DGSIIQKNIEAGNSLNTSMDCAVHNGDGSM 391
LS + L+L I + TA D + K+ E NSL TS+ + + +
Sbjct: 287 DQEAPLSKSTHLHLEKKVNVSWIKSNTATLDQNRSLKDGEE-NSLPTSI---FMDKNLRI 342
Query: 390 NESLYMREANRLLDGLGPRFIDWWWRKPLPIDADLLPEVVPEFKPPFRLCPPKERPTLRD 211
++SLY RE +RLLDGLGPRF+DWW KPLP+D DLLPEVVP FKPPFRL PP R L D
Sbjct: 343 DKSLYEREGDRLLDGLGPRFVDWWMWKPLPVDGDLLPEVVPGFKPPFRLSPPDARSKLTD 402
Query: 210 DELTYLRKLARPLPTHFALGKNTKLQGVAAAIIKLWEKSLIAKIAIKVGIPRTNNQQMAE 31
DELTYLRKLA PLPTHF LG+N LQG+A AI+KLWEKSL+AKIA+K GIP T+N+QMA
Sbjct: 403 DELTYLRKLAHPLPTHFVLGRNRGLQGLATAILKLWEKSLVAKIAVKWGIPNTDNEQMAN 462
Query: 30 ELK-------------RLTGGVV 1
ELK LTGGV+
Sbjct: 463 ELKNFKFSDDGVLLMQHLTGGVL 485
>ref|XP_010061906.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X2 [Eucalyptus grandis]
Length = 771
Score = 350 bits (897), Expect = 2e-93
Identities = 201/434 (46%), Positives = 262/434 (60%), Gaps = 26/434 (5%)
Frame = -1
Query: 1224 TKPSNIPIKVPTPPWMTSPFPLSPDQLLDLSQPKSKPNNKTHQKTQSNAYKSLTEKVKGG 1045
++PS+ P+++PT PWM P + P ++LDLS+P+S +K + + ++L ++ G
Sbjct: 61 SRPSD-PVRMPTAPWMRGPLLVPPREVLDLSRPRSGNRGSGDRKPEKSD-RALLDRASGV 118
Query: 1044 RSRQAMKKIVRNIKDLRKIDE------EAQE----------KAREPPLLPEMNGLGTNVP 913
R +A++KIV++I+ L E E+ E KA E +G G +P
Sbjct: 119 RGNKAVRKIVQSIEKLAGRSEAGGGGDESGEVEFGLCLEPLKAEERKEGGARSGFGGKMP 178
Query: 912 WARAEERMVFRREKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAKKAGVTQEVVNEI 733
W R E+ VF R K E+ A A +WVK KK GV+Q VV+EI
Sbjct: 179 WVREGEKAVFGRAKAEKAADVAELSLEKELLGRLRKEAAKLRKWVKVKKIGVSQAVVDEI 238
Query: 732 VKAWRKEELVMVRLVDPLRRNMDRAREIVEIKTGGLVVWSKKDALVVYHG-NYQSTTEAS 556
WR+ EL MV+ PL RNMDRA+EI+E+KTGGLV+W KKD LV+Y G +Y
Sbjct: 239 KWTWRRNELAMVKFDVPLCRNMDRAQEILEMKTGGLVIWRKKDTLVLYRGIHYPYKVFQE 298
Query: 555 QGSSPAFGG--------LSSPSALNLGIPAGTADGSIIQK-NIEAGNSLNTSMDCAVHNG 403
+ PA G S+P + P + +K E G +T++
Sbjct: 299 KDHIPANGQERLSFVCVQSNPKHVMSITPLKDNQRILDEKMKGEDGQRQSTAISIDYKAC 358
Query: 402 DGSMNESLYMREANRLLDGLGPRFIDWWWRKPLPIDADLLPEVVPEFKPPFRLCPPKERP 223
S+N SLY RE +RLLDGLGPRF+DWW KPLP+DADLLPEVVP F PP RLCPP ERP
Sbjct: 359 SESINGSLYERETDRLLDGLGPRFVDWWMHKPLPVDADLLPEVVPGFSPPLRLCPPNERP 418
Query: 222 TLRDDELTYLRKLARPLPTHFALGKNTKLQGVAAAIIKLWEKSLIAKIAIKVGIPRTNNQ 43
L DDELTYLRKLA PLPTHF LG+N KLQG+AAAI+KLWEKSLIAKIA+K G+P TNN+
Sbjct: 419 KLTDDELTYLRKLAHPLPTHFVLGRNRKLQGLAAAIMKLWEKSLIAKIAVKWGVPNTNNE 478
Query: 42 QMAEELKRLTGGVV 1
QMA+ELK LTGG++
Sbjct: 479 QMADELKCLTGGIL 492
>ref|XP_010061904.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic isoform X1 [Eucalyptus grandis]
Length = 781
Score = 350 bits (897), Expect = 2e-93
Identities = 201/434 (46%), Positives = 262/434 (60%), Gaps = 26/434 (5%)
Frame = -1
Query: 1224 TKPSNIPIKVPTPPWMTSPFPLSPDQLLDLSQPKSKPNNKTHQKTQSNAYKSLTEKVKGG 1045
++PS+ P+++PT PWM P + P ++LDLS+P+S +K + + ++L ++ G
Sbjct: 61 SRPSD-PVRMPTAPWMRGPLLVPPREVLDLSRPRSGNRGSGDRKPEKSD-RALLDRASGV 118
Query: 1044 RSRQAMKKIVRNIKDLRKIDE------EAQE----------KAREPPLLPEMNGLGTNVP 913
R +A++KIV++I+ L E E+ E KA E +G G +P
Sbjct: 119 RGNKAVRKIVQSIEKLAGRSEAGGGGDESGEVEFGLCLEPLKAEERKEGGARSGFGGKMP 178
Query: 912 WARAEERMVFRREKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAKKAGVTQEVVNEI 733
W R E+ VF R K E+ A A +WVK KK GV+Q VV+EI
Sbjct: 179 WVREGEKAVFGRAKAEKAADVAELSLEKELLGRLRKEAAKLRKWVKVKKIGVSQAVVDEI 238
Query: 732 VKAWRKEELVMVRLVDPLRRNMDRAREIVEIKTGGLVVWSKKDALVVYHG-NYQSTTEAS 556
WR+ EL MV+ PL RNMDRA+EI+E+KTGGLV+W KKD LV+Y G +Y
Sbjct: 239 KWTWRRNELAMVKFDVPLCRNMDRAQEILEMKTGGLVIWRKKDTLVLYRGIHYPYKVFQE 298
Query: 555 QGSSPAFGG--------LSSPSALNLGIPAGTADGSIIQK-NIEAGNSLNTSMDCAVHNG 403
+ PA G S+P + P + +K E G +T++
Sbjct: 299 KDHIPANGQERLSFVCVQSNPKHVMSITPLKDNQRILDEKMKGEDGQRQSTAISIDYKAC 358
Query: 402 DGSMNESLYMREANRLLDGLGPRFIDWWWRKPLPIDADLLPEVVPEFKPPFRLCPPKERP 223
S+N SLY RE +RLLDGLGPRF+DWW KPLP+DADLLPEVVP F PP RLCPP ERP
Sbjct: 359 SESINGSLYERETDRLLDGLGPRFVDWWMHKPLPVDADLLPEVVPGFSPPLRLCPPNERP 418
Query: 222 TLRDDELTYLRKLARPLPTHFALGKNTKLQGVAAAIIKLWEKSLIAKIAIKVGIPRTNNQ 43
L DDELTYLRKLA PLPTHF LG+N KLQG+AAAI+KLWEKSLIAKIA+K G+P TNN+
Sbjct: 419 KLTDDELTYLRKLAHPLPTHFVLGRNRKLQGLAAAIMKLWEKSLIAKIAVKWGVPNTNNE 478
Query: 42 QMAEELKRLTGGVV 1
QMA+ELK LTGG++
Sbjct: 479 QMADELKCLTGGIL 492
>gb|KHG25518.1| hypothetical protein F383_03195 [Gossypium arboreum]
Length = 737
Score = 347 bits (891), Expect = 1e-92
Identities = 199/416 (47%), Positives = 256/416 (61%), Gaps = 12/416 (2%)
Frame = -1
Query: 1212 NIPIKVPTPPWMTSPFPLSPDQLLDLSQPKSKPNNKTHQKTQSNAYKSLTEKVKGGRSRQ 1033
N PIK+PTPPWM P L PD++L+ S+P +K ++ + K K+L K G R ++
Sbjct: 46 NGPIKMPTPPWMKGPLLLQPDEVLNASKPTTKRSSNNNSKAPE---KALFGKESGVRGKK 102
Query: 1032 AMKKIVRNIKDLR---KIDEEAQEKAREPPLLPEMNGLGTN---------VPWARAEERM 889
MKKI+R+++ L+ +D+ K E + + +G++ +PW R EE++
Sbjct: 103 VMKKIIRDVEKLQGNGALDDTQIGKFEEFEIGNWLEEIGSDGEVKKFDRKMPWVREEEKV 162
Query: 888 VFRREKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAKKAGVTQEVVNEIVKAWRKEE 709
VFRR KKE+V T+A +WVK KAGVTQ+VV+EI AW E
Sbjct: 163 VFRRMKKEKVLTQAEIILDNDLLERLRKKATRMRKWVKVMKAGVTQDVVDEIRLAWGNNE 222
Query: 708 LVMVRLVDPLRRNMDRAREIVEIKTGGLVVWSKKDALVVYHGNYQSTTEASQGSSPAFGG 529
LVM++ PL RNMDRA EIVE+KTGGLVVW KKD LVVY G T Q F
Sbjct: 223 LVMLKFGVPLCRNMDRASEIVEMKTGGLVVWCKKDILVVYRGQNHWLTSNGQR---VFNN 279
Query: 528 LSSPSALNLGIPAGTADGSIIQKNIEAGNSLNTSMDCAVHNGDGSMNESLYMREANRLLD 349
L+S + N + ++ S ++++ + + SLY RE +RLLD
Sbjct: 280 LASDN--NTTMSPEKSNASTWRRSLNGEDRDENNQPVV---------GSLYERETDRLLD 328
Query: 348 GLGPRFIDWWWRKPLPIDADLLPEVVPEFKPPFRLCPPKERPTLRDDELTYLRKLARPLP 169
GLGPRFIDWW RKPLP+DADLLPEVVP FKPP RL PPK RP L D+ELT LRKLA PLP
Sbjct: 329 GLGPRFIDWWMRKPLPVDADLLPEVVPGFKPPTRLSPPKTRPKLTDEELTNLRKLAHPLP 388
Query: 168 THFALGKNTKLQGVAAAIIKLWEKSLIAKIAIKVGIPRTNNQQMAEELKRLTGGVV 1
HF LG+N LQG+A +I+KLWEKSLIAKIAIK G+ T+N+QMA ELK LTGGV+
Sbjct: 389 FHFVLGRNRNLQGLANSILKLWEKSLIAKIAIKWGVQNTDNEQMANELKDLTGGVL 444
>gb|KDO59071.1| hypothetical protein CISIN_1g041729mg [Citrus sinensis]
Length = 744
Score = 347 bits (890), Expect = 1e-92
Identities = 212/417 (50%), Positives = 260/417 (62%), Gaps = 25/417 (5%)
Frame = -1
Query: 1197 VPTPPWMTSPFPLSPDQLLDLSQPKSKPNNKTHQKTQSNAYKSLTEKVKGGRSRQAMKKI 1018
+PT PWM SP L PD+++ S+PK+K K+ +KT K LT K G R +QAMKKI
Sbjct: 1 MPTAPWMRSPIVLQPDEIIKPSKPKTK---KSFKKTD----KGLTAKESGVRGKQAMKKI 53
Query: 1017 VRNIKDLRK--IDEEAQEKAREPPLLP---EMN---------GLGTNVPWARAEERMVFR 880
+ NI+ L+K I +E Q+K E E N G G VPW R E+R VFR
Sbjct: 54 IENIEKLQKDQILDETQKKVMEKFEFKGCFEENVSHEEDLRGGFGGKVPWLR-EDRFVFR 112
Query: 879 REKKERVATKAXXXXXXXXXXXXXXXXXXXXRWVKAKKAGVTQEVVNEIVKAWRKEELVM 700
R KKER+ TKA +WVK KKAGVT+ VV EI AWR+ EL M
Sbjct: 113 RMKKERMVTKAETMLDGELLERLKDEARKMRKWVKVKKAGVTESVVFEIRLAWRRNELAM 172
Query: 699 VRLVDPLRRNMDRAREIVEIKTGGLVVWSKKDALVVYHGN--YQSTTEASQGSSPAFGGL 526
V+ PL RNMDRAREI+E+KTGGLV+W+KKDA VVY G+ S + + L
Sbjct: 173 VKFDVPLCRNMDRAREILELKTGGLVIWTKKDAHVVYRGDGSKSSVKMCPRSADDQEAPL 232
Query: 525 SSPSALNLG-------IPAGTA--DGSIIQKNIEAGNSLNTSMDCAVHNGDGSMNESLYM 373
S + L+L I + TA D + K+ E NSL TS+ + + +++SLY
Sbjct: 233 SKSTHLHLEKKVNVSWIKSNTATLDQNRSLKDGEE-NSLPTSI---FMDKNLRIDKSLYE 288
Query: 372 REANRLLDGLGPRFIDWWWRKPLPIDADLLPEVVPEFKPPFRLCPPKERPTLRDDELTYL 193
RE +RLLDGLGPRF+DWW KPLP+D DLLPEVVP FKPPFRL PP R L DDELTYL
Sbjct: 289 REGDRLLDGLGPRFVDWWMWKPLPVDGDLLPEVVPGFKPPFRLSPPDARSKLTDDELTYL 348
Query: 192 RKLARPLPTHFALGKNTKLQGVAAAIIKLWEKSLIAKIAIKVGIPRTNNQQMAEELK 22
RKLA PLPTHF LG+N LQG+A AI+KLWEKSL+AKI +K GIP T+N+QMA ELK
Sbjct: 349 RKLAHPLPTHFVLGRNRGLQGLATAILKLWEKSLVAKITVKWGIPNTDNEQMANELK 405