BLASTX nr result
ID: Anemarrhena21_contig00013924
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00013924
(955 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009380333.1| PREDICTED: DNA-directed RNA polymerases II a... 335 2e-89
ref|XP_010922037.1| PREDICTED: DNA-directed RNA polymerases II a... 328 3e-87
ref|XP_008788537.1| PREDICTED: DNA-directed RNA polymerases II a... 323 8e-86
ref|NP_001141164.1| uncharacterized protein LOC100273250 [Zea ma... 319 2e-84
ref|XP_004970292.1| PREDICTED: DNA-directed RNA polymerases II a... 318 5e-84
ref|XP_006644871.1| PREDICTED: DNA-directed RNA polymerases II a... 317 1e-83
ref|NP_001044564.1| Os01g0805800 [Oryza sativa Japonica Group] g... 313 9e-83
gb|EEE55548.1| hypothetical protein OsJ_03801 [Oryza sativa Japo... 311 6e-82
ref|XP_008801856.1| PREDICTED: DNA-directed RNA polymerases II a... 308 5e-81
emb|CDM85840.1| unnamed protein product [Triticum aestivum] 308 5e-81
ref|XP_010928511.1| PREDICTED: DNA-directed RNA polymerases II a... 307 6e-81
ref|XP_010930084.1| PREDICTED: DNA-directed RNA polymerases II a... 307 8e-81
dbj|BAK02012.1| predicted protein [Hordeum vulgare subsp. vulgar... 307 8e-81
ref|XP_003564430.1| PREDICTED: DNA-directed RNA polymerases II a... 305 3e-80
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr... 304 5e-80
ref|XP_010107375.1| DNA-directed RNA polymerases I, II, and III ... 300 1e-78
ref|XP_006858910.1| PREDICTED: DNA-directed RNA polymerases II a... 299 2e-78
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases II a... 299 2e-78
ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II a... 296 1e-77
ref|XP_010274103.1| PREDICTED: DNA-directed RNA polymerases II a... 295 3e-77
>ref|XP_009380333.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Musa acuminata subsp. malaccensis]
Length = 204
Score = 335 bits (860), Expect = 2e-89
Identities = 161/193 (83%), Positives = 186/193 (96%)
Frame = -3
Query: 839 EQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTKKNDP 660
++T+ RL+RIRRTVM+MLRDRGYLVVDFEI M+K +F++KFGEGVKREDL+INK++KNDP
Sbjct: 3 DETIGRLFRIRRTVMQMLRDRGYLVVDFEINMTKLDFLHKFGEGVKREDLLINKSRKNDP 62
Query: 659 TDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPMFHLE 480
TDQIYVFFPND+KVGMKHIKKYVELMK+E+VPRAILV+QQNLTPFAK++LQE+SP +HLE
Sbjct: 63 TDQIYVFFPNDEKVGMKHIKKYVELMKAESVPRAILVLQQNLTPFAKSYLQELSPKYHLE 122
Query: 479 VFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYGLKRG 300
VF EAELLVNIK+HVLV EHQ+LT EEKKTLL+RYTLKETQLPRIQ+TDP+ARYYGLKRG
Sbjct: 123 VFQEAELLVNIKDHVLVAEHQMLTNEEKKTLLERYTLKETQLPRIQVTDPIARYYGLKRG 182
Query: 299 QVVKIIRPSETAG 261
QVVKIIRPSETAG
Sbjct: 183 QVVKIIRPSETAG 195
>ref|XP_010922037.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
isoform X1 [Elaeis guineensis]
Length = 204
Score = 328 bits (842), Expect = 3e-87
Identities = 160/196 (81%), Positives = 184/196 (93%)
Frame = -3
Query: 848 MADEQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTKK 669
MAD+ + RL+RIRRTVM+ML+DRGYLVVDFEI MSK +F++KFGEGVKREDL+INK+KK
Sbjct: 1 MADDP-IGRLHRIRRTVMQMLKDRGYLVVDFEINMSKIDFLHKFGEGVKREDLLINKSKK 59
Query: 668 NDPTDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPMF 489
NDP DQIYVFFPNDDKVG+KHIKKY ELMK E+VPRAILV+QQNLTPFA+++LQE+SP +
Sbjct: 60 NDPADQIYVFFPNDDKVGVKHIKKYAELMKVESVPRAILVLQQNLTPFARSYLQELSPKY 119
Query: 488 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYGL 309
H E+F EAELL+NIKEHVLVP+HQ+LT EEKKTLL+RYTLKETQLPRIQ+TDPVARYYGL
Sbjct: 120 HSEIFQEAELLINIKEHVLVPKHQLLTNEEKKTLLERYTLKETQLPRIQVTDPVARYYGL 179
Query: 308 KRGQVVKIIRPSETAG 261
KRGQVVKIIRPSETAG
Sbjct: 180 KRGQVVKIIRPSETAG 195
>ref|XP_008788537.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
isoform X1 [Phoenix dactylifera]
Length = 204
Score = 323 bits (829), Expect = 8e-86
Identities = 158/196 (80%), Positives = 182/196 (92%)
Frame = -3
Query: 848 MADEQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTKK 669
MAD+ + RLYRIR+TVM MLRDRGYLVVDFEI M+K +F++KFGEGVKREDL+INK+KK
Sbjct: 1 MADD-LIGRLYRIRQTVMLMLRDRGYLVVDFEINMTKIDFLHKFGEGVKREDLLINKSKK 59
Query: 668 NDPTDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPMF 489
NDP DQIYVFFPND+KVG+K IKKY ELMK+E+VPRAILV+QQNLTPFA ++LQE+SP +
Sbjct: 60 NDPADQIYVFFPNDEKVGVKQIKKYAELMKAESVPRAILVLQQNLTPFATSYLQELSPKY 119
Query: 488 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYGL 309
HLE+F EAELL+NIK+HVLVPEHQ+LT EEKKTLL+RYTLKETQ PRIQ+TDPVARYYGL
Sbjct: 120 HLEIFQEAELLINIKDHVLVPEHQLLTNEEKKTLLERYTLKETQFPRIQVTDPVARYYGL 179
Query: 308 KRGQVVKIIRPSETAG 261
KRGQVVKIIRPSETAG
Sbjct: 180 KRGQVVKIIRPSETAG 195
>ref|NP_001141164.1| uncharacterized protein LOC100273250 [Zea mays]
gi|226533456|ref|NP_001152590.1| DNA-directed RNA
polymerases II 24 kDa polypeptide [Zea mays]
gi|194703030|gb|ACF85599.1| unknown [Zea mays]
gi|195657875|gb|ACG48405.1| DNA-directed RNA polymerases
II 24 kDa polypeptide [Zea mays]
gi|413952167|gb|AFW84816.1| DNA-directed RNA polymerase
II polypeptide [Zea mays]
Length = 210
Score = 319 bits (817), Expect = 2e-84
Identities = 155/196 (79%), Positives = 174/196 (88%)
Frame = -3
Query: 848 MADEQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTKK 669
+ DE TV RLYRIRRTVM+MLRDRGYLVVD E+ S+ +F+ KFGE REDL+INK KK
Sbjct: 6 VTDEATVGRLYRIRRTVMQMLRDRGYLVVDHELATSRRDFLRKFGESFHREDLLINKYKK 65
Query: 668 NDPTDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPMF 489
NDP+DQIYVFFPNDDKVGMKHIKKYVE+M ENV RA+LV+QQNLTPFAK+ L E+ P
Sbjct: 66 NDPSDQIYVFFPNDDKVGMKHIKKYVEMMTHENVSRAVLVLQQNLTPFAKSFLIELEPKI 125
Query: 488 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYGL 309
HLE+F EAE+L+NIKEHVLVPEHQVLT EEKKTLL+RYTLKETQLPRIQITDP+ARYYGL
Sbjct: 126 HLEIFQEAEMLINIKEHVLVPEHQVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGL 185
Query: 308 KRGQVVKIIRPSETAG 261
+RGQVVKIIRPSETAG
Sbjct: 186 RRGQVVKIIRPSETAG 201
>ref|XP_004970292.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Setaria italica]
Length = 210
Score = 318 bits (814), Expect = 5e-84
Identities = 155/196 (79%), Positives = 174/196 (88%)
Frame = -3
Query: 848 MADEQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTKK 669
+ DE T+ RLYRIRRTVM+MLRDRGYLVV+ E+ S+ +F+ KFGE REDL+INK KK
Sbjct: 6 VTDEVTMGRLYRIRRTVMQMLRDRGYLVVEHELATSRRDFLRKFGESFHREDLLINKYKK 65
Query: 668 NDPTDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPMF 489
NDP+DQIYVFFPNDDKVGMKHIKKYVE+M ENV RA+LV+QQNLTPFAK+ L E+ P
Sbjct: 66 NDPSDQIYVFFPNDDKVGMKHIKKYVEMMTHENVSRAVLVLQQNLTPFAKSFLIELEPKI 125
Query: 488 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYGL 309
HLE+F EAELL+NIKEHVLVPEHQVLT EEKKTLL+RYTLKETQLPRIQITDP+ARYYGL
Sbjct: 126 HLEIFQEAELLINIKEHVLVPEHQVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGL 185
Query: 308 KRGQVVKIIRPSETAG 261
KRGQVVKIIRPSETAG
Sbjct: 186 KRGQVVKIIRPSETAG 201
>ref|XP_006644871.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Oryza brachyantha]
Length = 210
Score = 317 bits (811), Expect = 1e-83
Identities = 152/196 (77%), Positives = 175/196 (89%)
Frame = -3
Query: 848 MADEQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTKK 669
+ +E V RL RIRRTVM+MLRDRGYLVV+ E+ M + +F+ KFGE REDL+INK KK
Sbjct: 6 VTEEAMVGRLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKFGESFHREDLLINKYKK 65
Query: 668 NDPTDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPMF 489
NDP+DQIYVFFPNDDKVGMKHIKKYVE+MK+ENV RA+LV+QQNLTPFA++ LQE+ P
Sbjct: 66 NDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARSFLQELEPKI 125
Query: 488 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYGL 309
HLE+F EAELL+NIKEHVL+PEHQVLT EEKKTLL+RYTLKETQLPRIQITDP+ARYYGL
Sbjct: 126 HLEIFQEAELLINIKEHVLIPEHQVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGL 185
Query: 308 KRGQVVKIIRPSETAG 261
+RGQVVKIIRPSETAG
Sbjct: 186 RRGQVVKIIRPSETAG 201
>ref|NP_001044564.1| Os01g0805800 [Oryza sativa Japonica Group]
gi|55296830|dbj|BAD68174.1| putative DNA-directed RNA
polymerase II 23K chain [Oryza sativa Japonica Group]
gi|113534095|dbj|BAF06478.1| Os01g0805800 [Oryza sativa
Japonica Group] gi|215737136|dbj|BAG96065.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215765546|dbj|BAG87243.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218189238|gb|EEC71665.1| hypothetical protein
OsI_04128 [Oryza sativa Indica Group]
Length = 210
Score = 313 bits (803), Expect = 9e-83
Identities = 151/196 (77%), Positives = 174/196 (88%)
Frame = -3
Query: 848 MADEQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTKK 669
+ +E V RL RIRRTVM+MLRDRGYLVV+ E+ M + +F+ K+GE REDL+INK KK
Sbjct: 6 VTEEVMVGRLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKYGESFHREDLLINKYKK 65
Query: 668 NDPTDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPMF 489
NDP+DQIYVFFPNDDKVGMKHIKKYVE+MK+ENV RA+LV+QQNLTPFA++ LQE+ P
Sbjct: 66 NDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARSFLQELEPKI 125
Query: 488 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYGL 309
HLE+F EAELL+NIKEHVLVPEHQVL EEKKTLL+RYTLKETQLPRIQITDP+ARYYGL
Sbjct: 126 HLEIFQEAELLINIKEHVLVPEHQVLNNEEKKTLLERYTLKETQLPRIQITDPIARYYGL 185
Query: 308 KRGQVVKIIRPSETAG 261
+RGQVVKIIRPSETAG
Sbjct: 186 RRGQVVKIIRPSETAG 201
>gb|EEE55548.1| hypothetical protein OsJ_03801 [Oryza sativa Japonica Group]
Length = 210
Score = 311 bits (796), Expect = 6e-82
Identities = 150/196 (76%), Positives = 173/196 (88%)
Frame = -3
Query: 848 MADEQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTKK 669
+ +E V RL RIRRTVM+MLRDRGYLVV+ E+ M + +F+ K+GE REDL+INK KK
Sbjct: 6 VTEEVMVGRLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKYGESFHREDLLINKYKK 65
Query: 668 NDPTDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPMF 489
NDP+DQIYVFFPNDDKVGMKHIKKYVE+MK+ENV RA+LV+QQNLTPFA++ LQE+ P
Sbjct: 66 NDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARSFLQELEPKI 125
Query: 488 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYGL 309
HLE+F EAELL+NIKEHVLVPEHQVL EKKTLL+RYTLKETQLPRIQITDP+ARYYGL
Sbjct: 126 HLEIFQEAELLINIKEHVLVPEHQVLNNGEKKTLLERYTLKETQLPRIQITDPIARYYGL 185
Query: 308 KRGQVVKIIRPSETAG 261
+RGQVVKIIRPSETAG
Sbjct: 186 RRGQVVKIIRPSETAG 201
>ref|XP_008801856.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Phoenix dactylifera] gi|672163987|ref|XP_008801857.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like [Phoenix dactylifera]
Length = 204
Score = 308 bits (788), Expect = 5e-81
Identities = 152/193 (78%), Positives = 172/193 (89%)
Frame = -3
Query: 839 EQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTKKNDP 660
E + RL+RIRRTVM+MLRDRGYLV+D EI M+KN+F+ KFGEGVKR+DL+INK KKNDP
Sbjct: 3 EDDIGRLFRIRRTVMQMLRDRGYLVLDLEINMNKNQFLEKFGEGVKRDDLVINKAKKNDP 62
Query: 659 TDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPMFHLE 480
DQIYVFFPND KVG+K IK+YVE MK+ENV R ILVVQQ LTPFAK L E++ + LE
Sbjct: 63 ADQIYVFFPNDAKVGVKQIKQYVERMKAENVVRGILVVQQALTPFAKQSLTEVAQKYLLE 122
Query: 479 VFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYGLKRG 300
VF +AELLVNIK+HVLVPEHQVLT+EEKKTLL+RYTLKETQLPRIQ+TDPVARYYGLKRG
Sbjct: 123 VFQDAELLVNIKDHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQVTDPVARYYGLKRG 182
Query: 299 QVVKIIRPSETAG 261
QVVKIIRPSETAG
Sbjct: 183 QVVKIIRPSETAG 195
>emb|CDM85840.1| unnamed protein product [Triticum aestivum]
Length = 210
Score = 308 bits (788), Expect = 5e-81
Identities = 150/196 (76%), Positives = 170/196 (86%)
Frame = -3
Query: 848 MADEQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTKK 669
+ ++ TV RL RIRRTVM MLRDRGYLVV+ E+ M++ +F K+GE RED++INK KK
Sbjct: 6 VTEDVTVGRLVRIRRTVMHMLRDRGYLVVEHELSMTRRDFQRKYGESFHREDMLINKCKK 65
Query: 668 NDPTDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPMF 489
NDP DQIYVFFPND+KVGMKHIKKYVE+M +E V RAILVVQQNLTPFAK+ LQE+ P
Sbjct: 66 NDPNDQIYVFFPNDEKVGMKHIKKYVEMMNAEKVSRAILVVQQNLTPFAKSFLQELEPKI 125
Query: 488 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYGL 309
HLEVF +AE+L+NIKEHVLVPEHQVL EEKKTLL RYTLKETQLPRIQITDP+ARYYGL
Sbjct: 126 HLEVFQDAEMLINIKEHVLVPEHQVLANEEKKTLLARYTLKETQLPRIQITDPIARYYGL 185
Query: 308 KRGQVVKIIRPSETAG 261
KRGQVVKIIRPSETAG
Sbjct: 186 KRGQVVKIIRPSETAG 201
>ref|XP_010928511.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Elaeis guineensis] gi|743809116|ref|XP_010928512.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like [Elaeis guineensis]
Length = 204
Score = 307 bits (787), Expect = 6e-81
Identities = 152/193 (78%), Positives = 171/193 (88%)
Frame = -3
Query: 839 EQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTKKNDP 660
E +SRL+RIRRTVM+MLRDRGYLV+D EI M+K +F+ KFGEGVKREDL+INK KKNDP
Sbjct: 3 EDDISRLFRIRRTVMQMLRDRGYLVLDLEINMNKRQFLEKFGEGVKREDLVINKAKKNDP 62
Query: 659 TDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPMFHLE 480
DQIYVFFPND KVG+K IK+YVE MK+ENV R ILVVQQ LTPFA+ L E+S + LE
Sbjct: 63 ADQIYVFFPNDAKVGVKQIKQYVERMKAENVVRGILVVQQALTPFARQSLAEVSHKYMLE 122
Query: 479 VFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYGLKRG 300
VF ++ELLVNIKEHVLVPEHQVLT EEKKTLL+RYTLKETQLPRIQ+TDP+ARYYGLKRG
Sbjct: 123 VFQDSELLVNIKEHVLVPEHQVLTAEEKKTLLERYTLKETQLPRIQVTDPIARYYGLKRG 182
Query: 299 QVVKIIRPSETAG 261
QVVKIIRPSETAG
Sbjct: 183 QVVKIIRPSETAG 195
>ref|XP_010930084.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Elaeis guineensis] gi|743814587|ref|XP_010930085.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like [Elaeis guineensis]
gi|743814591|ref|XP_010930086.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like [Elaeis
guineensis]
Length = 204
Score = 307 bits (786), Expect = 8e-81
Identities = 152/193 (78%), Positives = 171/193 (88%)
Frame = -3
Query: 839 EQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTKKNDP 660
E +SRL+RIRRTVM+MLRDRGYLV+D EI M+K +F+ KFGEGVKREDL+INK KKNDP
Sbjct: 3 EDDISRLFRIRRTVMQMLRDRGYLVLDLEINMNKLQFLEKFGEGVKREDLVINKAKKNDP 62
Query: 659 TDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPMFHLE 480
DQIYVFFPND KVG+K IK+YVE MK+ENV R ILVVQQ LTPFA+ L E+S + LE
Sbjct: 63 ADQIYVFFPNDAKVGVKQIKQYVERMKAENVTRGILVVQQALTPFARQSLAEVSQKYMLE 122
Query: 479 VFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYGLKRG 300
VF + ELLVNIKEHVLVPEHQVLT+EEKKTLL+RYTLKETQLPRIQ+TDP+ARYYGLKRG
Sbjct: 123 VFQDTELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQVTDPIARYYGLKRG 182
Query: 299 QVVKIIRPSETAG 261
QVVKIIRPSETAG
Sbjct: 183 QVVKIIRPSETAG 195
>dbj|BAK02012.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326504136|dbj|BAK02854.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326511589|dbj|BAJ91939.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 307 bits (786), Expect = 8e-81
Identities = 150/196 (76%), Positives = 170/196 (86%)
Frame = -3
Query: 848 MADEQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTKK 669
+ ++ TV RL RIRRTVM MLRDRGYLVV+ E+ M++ +F K+GE RED++INK KK
Sbjct: 6 VTEDVTVGRLVRIRRTVMHMLRDRGYLVVEHELSMTRRDFQRKYGETFHREDMLINKCKK 65
Query: 668 NDPTDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPMF 489
NDP DQIYVFFPND+KVGMKHIKKYVE+M +E V RAILVVQQNLTPFAK+ LQE+ P
Sbjct: 66 NDPNDQIYVFFPNDEKVGMKHIKKYVEMMNAEKVSRAILVVQQNLTPFAKSFLQELEPKI 125
Query: 488 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYGL 309
HLEVF +AE+L+NIKEHVLVPEHQVL EEKKTLL RYTLKETQLPRIQITDP+ARYYGL
Sbjct: 126 HLEVFQDAEMLINIKEHVLVPEHQVLANEEKKTLLARYTLKETQLPRIQITDPIARYYGL 185
Query: 308 KRGQVVKIIRPSETAG 261
KRGQVVKIIRPSETAG
Sbjct: 186 KRGQVVKIIRPSETAG 201
>ref|XP_003564430.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Brachypodium distachyon]
Length = 210
Score = 305 bits (781), Expect = 3e-80
Identities = 148/196 (75%), Positives = 170/196 (86%)
Frame = -3
Query: 848 MADEQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTKK 669
+ D+ V RL RIR TVM MLRDRGYLVV+ E+ M++ +F K+GE REDL+INK KK
Sbjct: 6 VTDDAGVGRLVRIRSTVMHMLRDRGYLVVEHELAMTRRDFERKYGESFHREDLLINKCKK 65
Query: 668 NDPTDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPMF 489
NDP DQIYVFFPND+KVGMKHIKKYVE+M +E V RA++VVQQNLTPFAK+ LQE+ P
Sbjct: 66 NDPNDQIYVFFPNDEKVGMKHIKKYVEMMNAEKVSRAVVVVQQNLTPFAKSFLQELEPKI 125
Query: 488 HLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYGL 309
HLEVF +AE+L+NIKEHVLVPEHQVLT +EKKTLL+RYTLKETQLPRIQITDP+ARYYGL
Sbjct: 126 HLEVFQDAEMLINIKEHVLVPEHQVLTNDEKKTLLERYTLKETQLPRIQITDPIARYYGL 185
Query: 308 KRGQVVKIIRPSETAG 261
KRGQVVKIIRPSETAG
Sbjct: 186 KRGQVVKIIRPSETAG 201
>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
gi|567918420|ref|XP_006451216.1| hypothetical protein
CICLE_v10009504mg [Citrus clementina]
gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Citrus sinensis] gi|568843558|ref|XP_006475671.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like isoform X2 [Citrus sinensis]
gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X3
[Citrus sinensis] gi|557554441|gb|ESR64455.1|
hypothetical protein CICLE_v10009504mg [Citrus
clementina] gi|557554442|gb|ESR64456.1| hypothetical
protein CICLE_v10009504mg [Citrus clementina]
Length = 206
Score = 304 bits (779), Expect = 5e-80
Identities = 153/197 (77%), Positives = 174/197 (88%)
Frame = -3
Query: 851 SMADEQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTK 672
+++DE+ + RL+RIRRTVM+MLRDRGY V DFEI MSK +FI KFGE +KREDL+INK
Sbjct: 2 TLSDEE-IKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKAL 60
Query: 671 KNDPTDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPM 492
+ND +DQIYVFFP++ KVG+K +K Y MKSENV RAILVVQQNLTPFA+T +QEIS
Sbjct: 61 RNDSSDQIYVFFPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIQEISAK 120
Query: 491 FHLEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYG 312
FHLEVF EAELLVNIKEHVLVPEHQVLT EEKKTLLKRYT+KETQLPRIQ+TDP+ARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLKRYTVKETQLPRIQVTDPIARYYG 180
Query: 311 LKRGQVVKIIRPSETAG 261
LKRGQVVKIIRPSETAG
Sbjct: 181 LKRGQVVKIIRPSETAG 197
>ref|XP_010107375.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis] gi|587928674|gb|EXC15864.1| DNA-directed RNA
polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 253
Score = 300 bits (767), Expect = 1e-78
Identities = 147/193 (76%), Positives = 170/193 (88%)
Frame = -3
Query: 839 EQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTKKNDP 660
E ++RL+RIRRTVM+MLRDR YLV DFE+ M+K +F NK+GE +KREDLIINK+++ND
Sbjct: 5 EDEITRLFRIRRTVMQMLRDRNYLVGDFELNMTKEQFRNKYGENMKREDLIINKSRRNDS 64
Query: 659 TDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPMFHLE 480
DQIYVFFP + KVG+K +K Y+ MKSENV RA+LVVQQNLTPFA+T + EIS FHLE
Sbjct: 65 PDQIYVFFPEEQKVGVKTMKTYINRMKSENVLRAVLVVQQNLTPFARTCISEISTKFHLE 124
Query: 479 VFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYGLKRG 300
VF EAELLVNIKEHVLVPEHQVLT EEKKTLL+RYT+KETQLPRIQ+TDP+ARYYGLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRG 184
Query: 299 QVVKIIRPSETAG 261
QVVKIIRPSETAG
Sbjct: 185 QVVKIIRPSETAG 197
>ref|XP_006858910.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Amborella trichopoda] gi|548863022|gb|ERN20377.1|
hypothetical protein AMTR_s00068p00034280 [Amborella
trichopoda]
Length = 206
Score = 299 bits (766), Expect = 2e-78
Identities = 149/194 (76%), Positives = 175/194 (90%)
Frame = -3
Query: 842 DEQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTKKND 663
D+QT S+L+RIRRT+M+MLRDRGYLV DFEI M+K +FI KFG+ VK++DL+INKT +N+
Sbjct: 5 DDQT-SKLFRIRRTLMQMLRDRGYLVGDFEINMTKAQFIEKFGDEVKKDDLVINKTMRNN 63
Query: 662 PTDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPMFHL 483
P++QIYVFFP + KVG+K +K Y E MKSENV RAILV+QQNLTPFA+ +QEIS FHL
Sbjct: 64 PSEQIYVFFPEEQKVGVKTVKTYTERMKSENVFRAILVLQQNLTPFARQCVQEISAKFHL 123
Query: 482 EVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYGLKR 303
E+F E+ELLVNIKEHVLVPEHQVLT+EEKKTLL+RYTLKETQLPRIQITDP+ARYYGLKR
Sbjct: 124 EIFQESELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 183
Query: 302 GQVVKIIRPSETAG 261
GQVVKIIRPSETAG
Sbjct: 184 GQVVKIIRPSETAG 197
>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A [Vitis
vinifera] gi|225445172|ref|XP_002284110.1| PREDICTED:
DNA-directed RNA polymerases II and IV subunit 5A [Vitis
vinifera]
Length = 206
Score = 299 bits (766), Expect = 2e-78
Identities = 146/195 (74%), Positives = 173/195 (88%)
Frame = -3
Query: 845 ADEQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTKKN 666
A E+ +SRL+RIR+TVM+ML+DRGY V DFEI M+K++F++KFGE +KREDL+INK K+
Sbjct: 3 ASEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRT 62
Query: 665 DPTDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPMFH 486
D +DQIYVFFP + KVG+K +K Y MKSENV RAILVVQQNLTPFA+T + EIS FH
Sbjct: 63 DSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFH 122
Query: 485 LEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYGLK 306
LEVF EAELLVNIKEHVLVPEHQVLT+EEKKTLL+RYT+KETQLPRIQ++DP+ARY+GLK
Sbjct: 123 LEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFGLK 182
Query: 305 RGQVVKIIRPSETAG 261
RGQVVKIIRPSETAG
Sbjct: 183 RGQVVKIIRPSETAG 197
>ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Populus euphratica]
Length = 206
Score = 296 bits (758), Expect = 1e-77
Identities = 146/193 (75%), Positives = 170/193 (88%)
Frame = -3
Query: 839 EQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTKKNDP 660
E+ + RL+RIR+TVM+ML+DRGY V DFEIKM++ +F +K+G +KREDL+INKTK+ND
Sbjct: 5 EEEIKRLFRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTKRNDS 64
Query: 659 TDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPMFHLE 480
+DQIYVFFP + KVG+K +K Y MKSENV RAILVVQQNLTPFA+T + EIS FHLE
Sbjct: 65 SDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLE 124
Query: 479 VFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYGLKRG 300
VF EAELLVNIKEHVLVPEHQVL+ EEKKTLL+RYT+KETQLPRIQITDP+ARYYGLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRG 184
Query: 299 QVVKIIRPSETAG 261
QVVKIIRPSETAG
Sbjct: 185 QVVKIIRPSETAG 197
>ref|XP_010274103.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Nelumbo nucifera] gi|720057870|ref|XP_010274104.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A [Nelumbo nucifera]
Length = 206
Score = 295 bits (755), Expect = 3e-77
Identities = 145/195 (74%), Positives = 172/195 (88%)
Frame = -3
Query: 845 ADEQTVSRLYRIRRTVMEMLRDRGYLVVDFEIKMSKNEFINKFGEGVKREDLIINKTKKN 666
+ E ++RL+RIRRTV++ML+DRGYLV DFE+ M++++F++K+GE VKREDL+INK K+N
Sbjct: 3 SSEDEITRLFRIRRTVIQMLKDRGYLVGDFELNMTRSQFVSKYGENVKREDLVINKAKRN 62
Query: 665 DPTDQIYVFFPNDDKVGMKHIKKYVELMKSENVPRAILVVQQNLTPFAKTHLQEISPMFH 486
D +DQI+VFFP + KVG+K +K Y MKSENV RAILVVQQNLT FAKT + EI+ FH
Sbjct: 63 DSSDQIFVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTAFAKTCINEIAAKFH 122
Query: 485 LEVFLEAELLVNIKEHVLVPEHQVLTTEEKKTLLKRYTLKETQLPRIQITDPVARYYGLK 306
LEVF EAELLVNIKEHVLVPEHQVLT+EEKKTLL+RYTLKETQLPRIQI DP+ARYYGLK
Sbjct: 123 LEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQIGDPIARYYGLK 182
Query: 305 RGQVVKIIRPSETAG 261
RGQVVKIIRPSETAG
Sbjct: 183 RGQVVKIIRPSETAG 197