BLASTX nr result
ID: Anemarrhena21_contig00013651
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00013651
(2486 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010921352.1| PREDICTED: putative RNA polymerase II subuni... 611 e-172
ref|XP_008781193.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA... 611 e-171
ref|XP_010921353.1| PREDICTED: putative RNA polymerase II subuni... 561 e-157
ref|XP_004960407.1| PREDICTED: putative RNA polymerase II subuni... 450 e-123
ref|XP_002440538.1| hypothetical protein SORBIDRAFT_09g002730 [S... 449 e-123
emb|CDP15205.1| unnamed protein product [Coffea canephora] 444 e-121
sp|A2Y040.1|RPAP2_ORYSI RecName: Full=Putative RNA polymerase II... 443 e-121
ref|XP_007016926.1| F2P16.20 protein, putative isoform 1 [Theobr... 442 e-121
sp|Q6AVZ9.1|RPAP2_ORYSJ RecName: Full=Putative RNA polymerase II... 440 e-120
ref|XP_012479683.1| PREDICTED: putative RNA polymerase II subuni... 431 e-117
ref|XP_012479689.1| PREDICTED: putative RNA polymerase II subuni... 428 e-117
gb|KHG00854.1| hypothetical protein F383_23706 [Gossypium arboreum] 424 e-115
ref|XP_002321396.2| hypothetical protein POPTR_0015s01330g [Popu... 422 e-115
gb|KHG00855.1| hypothetical protein F383_23706 [Gossypium arboreum] 419 e-114
ref|XP_009389521.1| PREDICTED: putative RNA polymerase II subuni... 389 e-105
ref|XP_006654013.1| PREDICTED: putative RNA polymerase II subuni... 381 e-102
emb|CAN62034.1| hypothetical protein VITISV_014731 [Vitis vinifera] 323 5e-85
ref|XP_002280625.1| PREDICTED: putative RNA polymerase II subuni... 320 3e-84
ref|XP_002521936.1| conserved hypothetical protein [Ricinus comm... 310 5e-81
ref|XP_011087531.1| PREDICTED: putative RNA polymerase II subuni... 308 1e-80
>ref|XP_010921352.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog isoform X1 [Elaeis guineensis]
Length = 681
Score = 611 bits (1576), Expect = e-172
Identities = 359/750 (47%), Positives = 458/750 (61%), Gaps = 9/750 (1%)
Frame = -1
Query: 2438 PPITIASAIHKIQLSLLETPSTPFELLIAASTLLSKPDYDDVITERTISDLCGYPLCPNP 2259
P +T+A+AIH+IQ++LL+ ++ L AA LLS+PDY+DV+ ER+I+D CGYPLCPNP
Sbjct: 6 PSVTVANAIHRIQIALLDGATSSERQLFAAGALLSRPDYEDVVVERSIADHCGYPLCPNP 65
Query: 2258 LPSPSDRRRKGKYRVSLSEHKVYDLQETYNYCREECLIGSRALRGSLSDERRADIDVSRV 2079
L P DR KG+YRVSL EHKVYDL+ETY YC C+I SRA GSLS ER +D+ S
Sbjct: 66 L--PHDRPLKGRYRVSLREHKVYDLKETYKYCSPACVIASRAFAGSLSSERNSDLSAS-- 121
Query: 2078 KVEEVLRLFGYFXXXXXXXXXEKNSGRLVNLKLEIKEKEGGSAGDVKLDEWIGPSNAIEG 1899
KVE++L L F + G L KL I+EK AG+V LDEW+GP +AIEG
Sbjct: 122 KVEQILEL---FHQGASLEEVLEKDGDLGLSKLTIREKADAGAGEVSLDEWMGPCDAIEG 178
Query: 1898 YVPQ--LNQGSKFASNLESVQGIDGAKSREVDF-KAVTVGDKTDGVHSTESSALTSDLSQ 1728
YVPQ N+G K A+ + + ++ + E+DF + V DK DG S SS T D+S+
Sbjct: 179 YVPQHDRNKGLKVAATQKPSKRVEAVRQGELDFTSTMIVEDKLDGFSS--SSVCTQDVSE 236
Query: 1727 MIAKKLEDVVITEXXXXXXXXXXXXXXXXPTDATNNDIDKVDYSDVGFTSSVIFSNEFDA 1548
IAKKLED+ + E PT ++K + + F S ++ +E
Sbjct: 237 AIAKKLEDMDLLEKKTKATKTSSKSLKAKPT----RKVNKSKNNQMDFKSVIVMGDE--- 289
Query: 1547 APSETCIVSTQDVSELIAKQLEDVVIAEXXXXXXXXXXXXXXXXXXXXXXKNDEMNFHST 1368
++T VST++ SE + +F S
Sbjct: 290 --AQTSSVSTKNHSE--------------------------------------QFDFTSP 309
Query: 1367 IIMGDSVNIVAPKTSSVSSLDCAKQLTNKSDDVAHVRNKIESIGYIGSDNVLSSDRVSSQ 1188
+I+ KTS V +L N ++ H+ N++ES+ + DRV +
Sbjct: 310 MIIDQ-----PSKTSFV-------ELDNNLNNEVHLENELESLEIAQKE---LKDRVKME 354
Query: 1187 KEEVLQETGLKSSLKTSQSKGGNRSVSWADERSNGTLEDKEVRPK------VKEEEDPDX 1026
K +ET LKSSLK + SK G ++V WAD + E+++ P+ +D
Sbjct: 355 K----KETALKSSLKAAGSKVGRQTVKWADMEKDKAPEERKDGPEGNISTGALHGDDDGS 410
Query: 1025 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVILPQPQYGEGGKSEADDKALEF 846
GIVILPQPQ+ + G +EAD+ EF
Sbjct: 411 SLRFASAEACAAALTQAAESVASGLSEAGDAVSEAGIVILPQPQHVKEGDAEADEDTFEF 470
Query: 845 DQEVLKWPKKTVLLDSDMFDVEDSWHDTPPEGFSLTLSSFATMWMALFGWITCSSLAYIY 666
D+ +KWP+KTVLLD+DMF+VEDSWHDTPPEGFSLTLSSFATMWMALFGWITCSSLAYIY
Sbjct: 471 DRGFVKWPQKTVLLDTDMFEVEDSWHDTPPEGFSLTLSSFATMWMALFGWITCSSLAYIY 530
Query: 665 GHDESSQEDFLLVNGREYPRKFFLKDGKSSEIRQALDGFICRALPGLVMDLRLPTPVSTL 486
G +ESSQ+DFLLVNGREYP K L DGKS EIRQ +DGF+CRALP +VMDL+LPTPVSTL
Sbjct: 531 GQNESSQDDFLLVNGREYPHKTVLGDGKSLEIRQTIDGFVCRALPSIVMDLKLPTPVSTL 590
Query: 485 EKFAGRLLDTMSFVDALPSFKMKQWQVIVLLFMEALSVHRLPSLAPQMTSRSMLLHKVLN 306
EKF GRLLDTMSFVDALPSF+++QWQVIVLLF++ALSVHRLP LAP MT+R+MLLHKVLN
Sbjct: 591 EKFVGRLLDTMSFVDALPSFRIRQWQVIVLLFLDALSVHRLPPLAPHMTNRNMLLHKVLN 650
Query: 305 AAQVSSEEYETMRDLIMPLGRLPQFSMQRG 216
AQVS+EEYE+MRDLI+PLGR P+ SMQ G
Sbjct: 651 PAQVSAEEYESMRDLIIPLGRFPELSMQSG 680
>ref|XP_008781193.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA polymerase II subunit B1
CTD phosphatase RPAP2 homolog [Phoenix dactylifera]
Length = 689
Score = 611 bits (1575), Expect = e-171
Identities = 358/754 (47%), Positives = 457/754 (60%), Gaps = 9/754 (1%)
Frame = -1
Query: 2450 SDANPPITIASAIHKIQLSLLETPSTPFELLIAASTLLSKPDYDDVITERTISDLCGYPL 2271
+D P +TI+ A+H+IQ++L + ++ L AA LLS+ DY+DV+ ER+I+D CGYPL
Sbjct: 2 ADPPPSVTISDAVHQIQIALFDGAASSEGQLFAAGALLSRSDYEDVVVERSIADHCGYPL 61
Query: 2270 CPNPLPSPSDRRRKGKYRVSLSEHKVYDLQETYNYCREECLIGSRALRGSLSDERRADID 2091
CPNPL P D RK +YR+SL EHKVYDL+ETY YC C+I SRA GSLS ER +D+
Sbjct: 62 CPNPL--PQDVPRKSRYRISLREHKVYDLEETYKYCSPACVIASRAFAGSLSSERCSDLS 119
Query: 2090 VSRVKVEEVLRLFGYFXXXXXXXXXEKNSGRLVNLKLEIKEKEGGSAGDVKLDEWIGPSN 1911
S KVE++L L F + G L KL I+EK AG+V LDEW+GPS
Sbjct: 120 AS--KVEQILEL---FHRGASSEEALEKDGDLGLSKLTIREKADAGAGEVSLDEWMGPSG 174
Query: 1910 AIEGYVPQ--LNQGSKFASNLESVQGIDGAKSREVDF-KAVTVGDKTDGVHSTESSALTS 1740
AIEGYVPQ ++G K A+ + + + A E+DF + V DK DG + SS T
Sbjct: 175 AIEGYVPQHDRDKGLKVAAKQKLSKSAEDAGQGELDFTSTIIVRDKLDGF--SPSSVCTQ 232
Query: 1739 DLSQMIAKKLEDVVITEXXXXXXXXXXXXXXXXPTDATNNDIDKVDYSDVGFTSSVIFSN 1560
D+S+ I KKLEDVV+ E PT + +D+ + V F S ++ +
Sbjct: 233 DVSEAIIKKLEDVVLLETKTKTTKTSSKSLKPKPT----SKVDESKNNQVDFRSVIVMGD 288
Query: 1559 EFDAAPSETCIVSTQDVSELIAKQLEDVVIAEXXXXXXXXXXXXXXXXXXXXXXKNDEMN 1380
+ A+ VSTQ+ SE + N
Sbjct: 289 DAQAS-----CVSTQNHSE--------------------------------------QFN 305
Query: 1379 FHSTIIMGDSVNIVAPKTSSVSSLDCAKQLTNKSDDVAHVRNKIESIGYIGSDNVLSSDR 1200
F S +I+ APK SSV++ + +QL N ++ H+ N+IE Y+ + R
Sbjct: 306 FTSPMIIDQ-----APKMSSVTAQNRPEQLDNNLNNEVHLENEIE---YLETAQKELKYR 357
Query: 1199 VSSQKEEVLQETGLKSSLKTSQSKGGNRSVSWADERSNGTLEDKEVRPK------VKEEE 1038
V +K+E ET LKSSLK S SK G R+V WADE + LE+++ P+ E+
Sbjct: 358 VKLEKKE---ETALKSSLKASGSKVGRRTVKWADEEKDKALEERKDGPESNISTGASHED 414
Query: 1037 DPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVILPQPQYGEGGKSEADDK 858
D D IVILPQPQY + G +E D+
Sbjct: 415 DDDSSLRLASAEACAAALTQAAESVASGLSETGDAVSETEIVILPQPQYAKEGDAEEDED 474
Query: 857 ALEFDQEVLKWPKKTVLLDSDMFDVEDSWHDTPPEGFSLTLSSFATMWMALFGWITCSSL 678
+FD+ ++WPKKTVLLD+DMF+VEDSWHDTPPE FSLTLSSFATMWMALFGWITCSSL
Sbjct: 475 TFDFDRGFVQWPKKTVLLDTDMFEVEDSWHDTPPESFSLTLSSFATMWMALFGWITCSSL 534
Query: 677 AYIYGHDESSQEDFLLVNGREYPRKFFLKDGKSSEIRQALDGFICRALPGLVMDLRLPTP 498
AYIYG +ESSQ+D LLVNG+EYPRK L DGKS EIRQ +DG CRALP VMDL+LPTP
Sbjct: 535 AYIYGQNESSQDDXLLVNGKEYPRKTVLGDGKSLEIRQTIDGXCCRALPSFVMDLKLPTP 594
Query: 497 VSTLEKFAGRLLDTMSFVDALPSFKMKQWQVIVLLFMEALSVHRLPSLAPQMTSRSMLLH 318
VSTLEKF G+LLDTMSFVD LPSF+++QW+VIVLLF++ALSVHRLPSLAP MT+++MLLH
Sbjct: 595 VSTLEKFVGQLLDTMSFVDTLPSFRIRQWRVIVLLFLDALSVHRLPSLAPHMTNKNMLLH 654
Query: 317 KVLNAAQVSSEEYETMRDLIMPLGRLPQFSMQRG 216
KVLN AQVS+EEYE+MRDLI+PL R + SMQ G
Sbjct: 655 KVLNPAQVSAEEYESMRDLIIPLSRFLELSMQSG 688
>ref|XP_010921353.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog isoform X2 [Elaeis guineensis]
Length = 664
Score = 561 bits (1447), Expect = e-157
Identities = 334/717 (46%), Positives = 429/717 (59%), Gaps = 9/717 (1%)
Frame = -1
Query: 2438 PPITIASAIHKIQLSLLETPSTPFELLIAASTLLSKPDYDDVITERTISDLCGYPLCPNP 2259
P +T+A+AIH+IQ++LL+ ++ L AA LLS+PDY+DV+ ER+I+D CGYPLCPNP
Sbjct: 6 PSVTVANAIHRIQIALLDGATSSERQLFAAGALLSRPDYEDVVVERSIADHCGYPLCPNP 65
Query: 2258 LPSPSDRRRKGKYRVSLSEHKVYDLQETYNYCREECLIGSRALRGSLSDERRADIDVSRV 2079
L P DR KG+YRVSL EHKVYDL+ETY YC C+I SRA GSLS ER +D+ S
Sbjct: 66 L--PHDRPLKGRYRVSLREHKVYDLKETYKYCSPACVIASRAFAGSLSSERNSDLSAS-- 121
Query: 2078 KVEEVLRLFGYFXXXXXXXXXEKNSGRLVNLKLEIKEKEGGSAGDVKLDEWIGPSNAIEG 1899
KVE++L L F + G L KL I+EK AG+V LDEW+GP +AIEG
Sbjct: 122 KVEQILEL---FHQGASLEEVLEKDGDLGLSKLTIREKADAGAGEVSLDEWMGPCDAIEG 178
Query: 1898 YVPQ--LNQGSKFASNLESVQGIDGAKSREVDF-KAVTVGDKTDGVHSTESSALTSDLSQ 1728
YVPQ N+G K A+ + + ++ + E+DF + V DK DG S SS T D+S+
Sbjct: 179 YVPQHDRNKGLKVAATQKPSKRVEAVRQGELDFTSTMIVEDKLDGFSS--SSVCTQDVSE 236
Query: 1727 MIAKKLEDVVITEXXXXXXXXXXXXXXXXPTDATNNDIDKVDYSDVGFTSSVIFSNEFDA 1548
IAKKLED+ + E PT ++K + + F S ++ +E
Sbjct: 237 AIAKKLEDMDLLEKKTKATKTSSKSLKAKPT----RKVNKSKNNQMDFKSVIVMGDE--- 289
Query: 1547 APSETCIVSTQDVSELIAKQLEDVVIAEXXXXXXXXXXXXXXXXXXXXXXKNDEMNFHST 1368
++T VST++ SE + +F S
Sbjct: 290 --AQTSSVSTKNHSE--------------------------------------QFDFTSP 309
Query: 1367 IIMGDSVNIVAPKTSSVSSLDCAKQLTNKSDDVAHVRNKIESIGYIGSDNVLSSDRVSSQ 1188
+I+ KTS V +L N ++ H+ N++ES+ + DRV +
Sbjct: 310 MIIDQ-----PSKTSFV-------ELDNNLNNEVHLENELESLEIAQKE---LKDRVKME 354
Query: 1187 KEEVLQETGLKSSLKTSQSKGGNRSVSWADERSNGTLEDKEVRPK------VKEEEDPDX 1026
K +ET LKSSLK + SK G ++V WAD + E+++ P+ +D
Sbjct: 355 K----KETALKSSLKAAGSKVGRQTVKWADMEKDKAPEERKDGPEGNISTGALHGDDDGS 410
Query: 1025 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVILPQPQYGEGGKSEADDKALEF 846
GIVILPQPQ+ + G +EAD+ EF
Sbjct: 411 SLRFASAEACAAALTQAAESVASGLSEAGDAVSEAGIVILPQPQHVKEGDAEADEDTFEF 470
Query: 845 DQEVLKWPKKTVLLDSDMFDVEDSWHDTPPEGFSLTLSSFATMWMALFGWITCSSLAYIY 666
D+ +KWP+KTVLLD+DMF+VEDSWHDTPPEGFSLTLSSFATMWMALFGWITCSSLAYIY
Sbjct: 471 DRGFVKWPQKTVLLDTDMFEVEDSWHDTPPEGFSLTLSSFATMWMALFGWITCSSLAYIY 530
Query: 665 GHDESSQEDFLLVNGREYPRKFFLKDGKSSEIRQALDGFICRALPGLVMDLRLPTPVSTL 486
G +ESSQ+DFLLVNGREYP K L DGKS EIRQ +DGF+CRALP +VMDL+LPTPVSTL
Sbjct: 531 GQNESSQDDFLLVNGREYPHKTVLGDGKSLEIRQTIDGFVCRALPSIVMDLKLPTPVSTL 590
Query: 485 EKFAGRLLDTMSFVDALPSFKMKQWQVIVLLFMEALSVHRLPSLAPQMTSRSMLLHK 315
EKF GRLLDTMSFVDALPSF+++QWQVIVLLF++ALSVHRLP LAP MT+R+MLLHK
Sbjct: 591 EKFVGRLLDTMSFVDALPSFRIRQWQVIVLLFLDALSVHRLPPLAPHMTNRNMLLHK 647
>ref|XP_004960407.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog [Setaria italica]
Length = 739
Score = 450 bits (1158), Expect = e-123
Identities = 302/758 (39%), Positives = 407/758 (53%), Gaps = 22/758 (2%)
Frame = -1
Query: 2429 TIASAIHKIQLSLLETPSTPFELLI--AASTLLSKPDYDDVITERTISDLCGYPLCPNPL 2256
T+ASA+ ++Q++LL+ + E L+ AAS LLS+ DYDDV+TERTI+D CG P CPNPL
Sbjct: 17 TVASAVLRVQMALLDGAAASNEPLLHAAASALLSRADYDDVVTERTIADACGNPACPNPL 76
Query: 2255 PSPSDRRRKGKYRVSLSEHKVYDLQETYNYCREECLIGSRALRGSLSDERRADIDVSRVK 2076
P+ + ++ +SL EH+VYDL+E +C E CL+ S AL SL +R + R+
Sbjct: 77 PAATTAGGP-RFHISLREHRVYDLEEARKFCSERCLVASAALAASLPADRPFGVPPERLD 135
Query: 2075 VEEVLRLFGYFXXXXXXXXXEKNSGRLVNLKLEIKEKEGGSAGDVKLDEWIGPSNAIEGY 1896
L G + + + KLEIKEKE AG+V L +W+GPS+AIEGY
Sbjct: 136 AVVALVECGGAGEGQGLGFRDADGKKDEGRKLEIKEKEVAGAGEVTLQDWVGPSDAIEGY 195
Query: 1895 VPQLN---QGSKFASNLESVQGIDGAKSREVDFKAVTVGDKTDGVHSTESSALTSDLSQM 1725
VP+ + +G K A V G + + VD + G+ DG+ + SA T S++
Sbjct: 196 VPRRDRTTEGQKPAKK-NKVAGPELSGIENVDCRNAAPGE--DGMAGSSPSAETHVSSEV 252
Query: 1724 IAKKLEDVVITEXXXXXXXXXXXXXXXXPTDATNNDIDKVDYSDVGFTSSVIFSNEFDAA 1545
IA+K+ ++V++E K T S + E D
Sbjct: 253 IAEKMGNMVLSENT------------------------KTPRKMTTKTPSKMLKQEDDNN 288
Query: 1544 PSETCIVSTQDVSELIAKQLEDVVIAEXXXXXXXXXXXXXXXXXXXXXXKND------EM 1383
+CI S+ I KQLEDVV+ E K E+
Sbjct: 289 MLSSCI------SDSIEKQLEDVVLEEKRGAKKTKASKASSRSQKSKSRKRPGGSDGHEV 342
Query: 1382 NFHSTIIMGDSVNIVAPKTSSVSSLDCAKQLTNKSDDVAHVRNKIESIGYIGSDNVLSSD 1203
+F STII+GD+ + T + + + LT+ + K GY S+
Sbjct: 343 DFTSTIIIGDASTNMEQGTMNQYNYFSSSILTDNYASSSQSGAKGPMQGYAEQLYREFSE 402
Query: 1202 RVSSQKEEVLQET---GLKSSLKTSQSKGGNRSVSWADERSNGTLEDKEV----RPKVKE 1044
VS K+E E LKSS+K SK G++SV+WADE + LE ++ +K+
Sbjct: 403 AVSIGKDETSDEKMKPALKSSMKAPGSKSGSQSVTWADENGS-VLETSKLYESPSSSIKQ 461
Query: 1043 -EEDPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVILPQ---PQYGEGGK 876
EE D GI+ILP P+ K
Sbjct: 462 SEEGMDISLRRASAEACAAAFIEAAEAISSGTSEVDDAVSKAGIIILPDTLHPKQYSNEK 521
Query: 875 SEADDKALEFDQEVLKWPKKTVLLDSDMFDVEDSWHDTPPEGFSLTLSSFATMWMALFGW 696
S D+ E D++VLKWPKKTVLLD+DMF+V+DSWHDTPPEGFSLTLS FATMW ALFGW
Sbjct: 522 SSGADEESEIDRDVLKWPKKTVLLDTDMFEVDDSWHDTPPEGFSLTLSGFATMWAALFGW 581
Query: 695 ITCSSLAYIYGHDESSQEDFLLVNGREYPRKFFLKDGKSSEIRQALDGFICRALPGLVMD 516
I+ +SLAY+YG D S ED L+ NGREYP K LKDG S+EIR+ALD +C ALP LV +
Sbjct: 582 ISRASLAYVYGLDGCSVEDLLIANGREYPEKIVLKDGHSAEIRRALDTCVCNALPVLVSN 641
Query: 515 LRLPTPVSTLEKFAGRLLDTMSFVDALPSFKMKQWQVIVLLFMEALSVHRLPSLAPQMTS 336
LRL PVS LE G L+DTMSF D LPS + +QWQ++VL+ ++ LS+H+LP+LAP + S
Sbjct: 642 LRLRIPVSKLEITLGYLIDTMSFFDPLPSLRSRQWQLVVLVMLDVLSIHQLPALAP-VVS 700
Query: 335 RSMLLHKVLNAAQVSSEEYETMRDLIMPLGRLPQFSMQ 222
S L+ K+LNAAQVS EEYE+M DL +P GR Q MQ
Sbjct: 701 NSKLVQKMLNAAQVSREEYESMVDLFLPFGRSIQTFMQ 738
>ref|XP_002440538.1| hypothetical protein SORBIDRAFT_09g002730 [Sorghum bicolor]
gi|241945823|gb|EES18968.1| hypothetical protein
SORBIDRAFT_09g002730 [Sorghum bicolor]
Length = 746
Score = 449 bits (1155), Expect = e-123
Identities = 297/776 (38%), Positives = 410/776 (52%), Gaps = 32/776 (4%)
Frame = -1
Query: 2465 SPMATSDANPPITIASAIHKIQLSLLETPSTPFELLI--AASTLLSKPDYDDVITERTIS 2292
SP A + A P T+ASA+ +IQ++LL+ + E L+ AAS LLS+ DYDDV+TERTI+
Sbjct: 3 SPAAAAAAEAPRTVASAVLRIQMALLDGAAASNEALLHAAASALLSRADYDDVVTERTIA 62
Query: 2291 DLCGYPLCPNPLPSPSDRRRKG--KYRVSLSEHKVYDLQETYNYCREECLIGSRALRGSL 2118
D CG P CPNPLPS S ++ ++LSEH+VYDL+E +C + CL+ S+AL SL
Sbjct: 63 DACGNPACPNPLPSSSSAAAATGPRFHIALSEHRVYDLEEARKFCSDRCLVASKALAASL 122
Query: 2117 SDERRADIDVSRVKVEEVLRL--------FGYFXXXXXXXXXEKNSGRLVNLKLEIKEKE 1962
+R + + R+ L G K+ GR K+EIKEKE
Sbjct: 123 PHDRPYGVPLDRLAAVVALVEGAAAAGDGSGLGFQGVDGNVKMKDEGR----KVEIKEKE 178
Query: 1961 GGSAGDVKLDEWIGPSNAIEGYVPQLNQ---GSKFASNLESVQGIDGAKSREVDFKAVTV 1791
AG+V L +WIGPS+AIEGYVP+ ++ G K + V G D ++++ VD + T
Sbjct: 179 VAGAGEVSLQDWIGPSDAIEGYVPRRDRSAHGQKPQAEQNKVAGSDLSRTKNVDDR--TA 236
Query: 1790 GDKTDGVHSTESSALTSDLSQMIAKKLEDVVITEXXXXXXXXXXXXXXXXPTDATNNDID 1611
DG+ S S T ++++A+++ D+V+ E +
Sbjct: 237 APSEDGMTSPLSLVETHMSAEVMAERMGDLVLGE-----------------------NTK 273
Query: 1610 KVDYSDVGFTSSVIFSNEFDAAPSETCIVSTQDVSELIAKQLEDVVIAEXXXXXXXXXXX 1431
+ T S + E D + +CI S+ IAKQLEDVV+ E
Sbjct: 274 TLSRKKKTKTPSKMMEQEEDDSMLSSCI------SDSIAKQLEDVVLEERKGSKKNKVSK 327
Query: 1430 XXXXXXXXXXXKND------EMNFHSTIIMGDSVNIVAPKTSSVSSLDCAKQLTNKSDDV 1269
K E++F STII+GD+ + + + L +
Sbjct: 328 ASSRTHKSKSRKRPAGSDGHEVDFTSTIIIGDASTNREESAMNQYNYLSSSVLVDNHPSS 387
Query: 1268 AHVRNKIESIGYIGSDNVLSSDRVSSQKEEVLQET---GLKSSLKTSQSKGGNRSVSWAD 1098
+ K + Y S+ V+ +E E LK SLK + SK G +SV+WAD
Sbjct: 388 SQSSAKDSTQAYAEQLCEEFSEAVNIGNDETTDEKMRPALKPSLKVTGSKSGRQSVTWAD 447
Query: 1097 ERSNGTLEDKEVRPKVKEEEDP----DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 930
E + K + P D
Sbjct: 448 ENGSVLETSKAYESPSSSIKQPNEGIDSSLRRASAEACAAALIEAAEAISSGTAETEDAV 507
Query: 929 XXXGIVILP----QPQYGEGGKSEADDKALEFDQEVLKWPKKTVLLDSDMFDVEDSWHDT 762
GI+ILP Q +YG+ + DD E D++V+KWPKK VLLD+DMF+V+DSWHDT
Sbjct: 508 SKAGIIILPDMLNQKEYGDAKNNGGDDDP-EIDRDVIKWPKKPVLLDTDMFEVDDSWHDT 566
Query: 761 PPEGFSLTLSSFATMWMALFGWITCSSLAYIYGHDESSQEDFLLVNGREYPRKFFLKDGK 582
PPEGFSLTLS+F T+W ALFGWI+ SSLAY+YG + S E+ L+ NGREYP K LKDG
Sbjct: 567 PPEGFSLTLSAFGTIWAALFGWISRSSLAYVYGLERGSVEELLIANGREYPEKIVLKDGL 626
Query: 581 SSEIRQALDGFICRALPGLVMDLRLPTPVSTLEKFAGRLLDTMSFVDALPSFKMKQWQVI 402
SSEIR+ALD +C A+P L+ +LRL PVS LE G L+DTMSFV+ALPS + +QWQ +
Sbjct: 627 SSEIRRALDSCVCNAVPVLISNLRLQIPVSKLEITLGYLIDTMSFVEALPSLRSRQWQAV 686
Query: 401 VLLFMEALSVHRLPSLAPQMTSRSMLLHKVLNAAQVSSEEYETMRDLIMPLGRLPQ 234
VL+ ++ALSVH+LP+LAP + S S L+ K+LNAAQVS EEY++M DL +P GR Q
Sbjct: 687 VLVMLDALSVHQLPALAP-VFSNSKLVQKMLNAAQVSREEYDSMVDLFLPFGRSVQ 741
>emb|CDP15205.1| unnamed protein product [Coffea canephora]
Length = 762
Score = 444 bits (1141), Expect = e-121
Identities = 304/797 (38%), Positives = 413/797 (51%), Gaps = 57/797 (7%)
Frame = -1
Query: 2432 ITIASAIHKIQLSLLETPSTPFELLIAASTLLSKPDYDDVITERTISDLCGYPLCPNPLP 2253
I I A+H++QLSLLE +L AA +++S+ DY DV+TER+I++LCGYPLC N LP
Sbjct: 7 IAIKDAVHRLQLSLLEGIQDENKLF-AAGSVMSQSDYQDVVTERSITNLCGYPLCGNSLP 65
Query: 2252 SPSDRRRKGKYRVSLSEHKVYDLQETYNYCREECLIGSRALRGSLSDERRADIDVSRVKV 2073
+R RKG+YR+SL EHKVYDL ETY YC C++ S+A SL +ER + ++ VK+
Sbjct: 66 L--ERPRKGRYRISLKEHKVYDLHETYMYCSTNCVVNSQAFVASLQEERSSTLNP--VKL 121
Query: 2072 EEVLRLFGYFXXXXXXXXXEKNSGRLVNLKLEIKEKEGGSAGDVKLDEWIGPSNAIEGYV 1893
E+LRLF KNS ++ KL I+E +G+V LDEWIGPSNAIEGYV
Sbjct: 122 NEILRLFEGLSLEESSGGFGKNSDLELS-KLRIQEMTDTGSGEVSLDEWIGPSNAIEGYV 180
Query: 1892 PQLNQGSKF--ASNLES--------VQGIDGAKSREVDFKAVTV---------------- 1791
P + S A NLE +Q I ++DF + +
Sbjct: 181 PLKDSCSNIQQARNLEKGCKSEHAYIQQIKDNFFNDMDFTSTLIIQDEYSISKSPDPARS 240
Query: 1790 --GDKTDGVHSTESSALTSDLSQMIAKKLEDVVITEXXXXXXXXXXXXXXXXPTDAT--- 1626
G KTD + D+ + +LE V++E
Sbjct: 241 ISGHKTD---KQKGKMKHKDMKDDESSELEGRVVSEGNKIEKKNLDKAPRKPAIKDNLGD 297
Query: 1625 -----NNDIDKV-----DYSDVGFTSSVIFSNEFDAAPSETCIVSTQDVSELIAKQLEDV 1476
+NDID+ ++D+ FTS++I +E+ + S D + I+ D
Sbjct: 298 SLGDLSNDIDEKLIKDNFFNDMDFTSTLIIQDEYSISKSP-------DPARSISGHKTD- 349
Query: 1475 VIAEXXXXXXXXXXXXXXXXXXXXXXKNDEMNFHSTIIMGDSVNIVAPKTSSVSSLDCAK 1296
K+DE + ++ + I K
Sbjct: 350 ---------------KQKGKMKHKDMKDDESSELEGRVVSEGNKIEKKNLDKAPRKPAIK 394
Query: 1295 QLTNKSDDVAHVRNKIESIGYIGSDNVLSSDRVSS-QKEEVLQETG--LKSSLKTSQSKG 1125
N D + + N I+ + ++ SD S Q E+ T LK SLK+S+ K
Sbjct: 395 D--NLGDSLGDLSNDID-------EKLVISDSFSEFQAEKASSSTANMLKPSLKSSKGKR 445
Query: 1124 GNRSVSWADERSNGT----------LEDKE---VRPKVKEEEDPDXXXXXXXXXXXXXXX 984
G RSV+WADE+ +G LED + +P E +
Sbjct: 446 GTRSVTWADEKVDGDGSKSLCEFRELEDTKNIFSQPGSAVMEVNEDPYRFASAEVCARAL 505
Query: 983 XXXXXXXXXXXXXXXXXXXXXGIVILPQPQYGEGGKSEADDKALEFDQEVLKWPKKTVLL 804
GI++LP G +++ + + + VLKWP K+ L
Sbjct: 506 SEAAEAVVSGDADTSDAVAEAGIIVLPPHPEVHGTEAQVEVDMPDSETNVLKWPMKSGLS 565
Query: 803 DSDMFDVEDSWHDTPPEGFSLTLSSFATMWMALFGWITCSSLAYIYGHDESSQEDFLLVN 624
+SD+ D DSW+DTPPEGFSL LS FATM+MALFGWI+ SSLAYIYGHDES ED+L +N
Sbjct: 566 NSDLLDPNDSWYDTPPEGFSLNLSPFATMFMALFGWISSSSLAYIYGHDESLHEDYLYIN 625
Query: 623 GREYPRKFFLKDGKSSEIRQALDGFICRALPGLVMDLRLPTPVSTLEKFAGRLLDTMSFV 444
GREYP K F DG+S EI+QAL G + RALP LV DL+LP P+STLEK LLDTMSF+
Sbjct: 626 GREYPCKIFSTDGRSLEIKQALAGCLARALPALVADLQLPMPLSTLEKEMDHLLDTMSFM 685
Query: 443 DALPSFKMKQWQVIVLLFMEALSVHRLPSLAPQMTSRSMLLHKVLNAAQVSSEEYETMRD 264
D LP F+MKQWQ++VLL ++ALSV R+P+L P MT R +LL KVL AQ+S+EEYE M+D
Sbjct: 686 DPLPPFRMKQWQLLVLLLLDALSVCRIPALTPYMTGRRILLPKVLQGAQISAEEYEIMKD 745
Query: 263 LIMPLGRLPQFSMQRGA 213
LI+PLGR+PQF+MQ GA
Sbjct: 746 LIIPLGRVPQFAMQCGA 762
>sp|A2Y040.1|RPAP2_ORYSI RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog; AltName: Full=RNA polymerase II-associated
protein 2 homolog gi|125550741|gb|EAY96450.1|
hypothetical protein OsI_18345 [Oryza sativa Indica
Group]
Length = 726
Score = 443 bits (1139), Expect = e-121
Identities = 309/795 (38%), Positives = 415/795 (52%), Gaps = 50/795 (6%)
Frame = -1
Query: 2468 ISPMATSDANP---PITIASAIHKIQLSLLETPSTPFE-LLIAASTLLSKPDYDDVITER 2301
+ P +DA P T+ASA+H++Q++L + + E LL AA++LLS PDY DV+TER
Sbjct: 1 MGPTTATDAGARMKPTTVASAVHRVQMALYDGAAASREPLLRAAASLLSGPDYADVVTER 60
Query: 2300 TISDLCGYPLCPNPLPSPSDRRRKG-KYRVSLSEHKVYDLQETYNYCREECLIGSRALRG 2124
+I+D CGYP CPNPLPS R + ++R+SL EH+VYDL+E +C E CL+ S A
Sbjct: 61 SIADACGYPACPNPLPSEDARGKAAPRFRISLREHRVYDLEEARKFCSERCLVASAAFGA 120
Query: 2123 SLSDERRADIDVSRVKVEEVLRLF-----GYFXXXXXXXXXEKNSGRLVN--LKLEIKEK 1965
SL +R VS +++ ++ LF G G+ V K+EI EK
Sbjct: 121 SLPPDR--PFGVSPDRLDALVALFEGGGGGGGDGGLALGFGASGDGKEVEEGRKVEIMEK 178
Query: 1964 EGGSAGDVKLDEWIGPSNAIEGYVPQLNQGSKFASNLESVQGIDGAKSREVDFKAVTVGD 1785
E G+V L EWIGPS+AIEGYVP+ ++ + G +E
Sbjct: 179 EAAGTGEVTLQEWIGPSDAIEGYVPRRDR-------------VVGGPKKEAK-------- 217
Query: 1784 KTDGVHSTESSALTSDLSQMIAKKLEDVVITEXXXXXXXXXXXXXXXXPTDATNNDIDKV 1605
+ D + +SS + D S+ + +V+TE T A + K
Sbjct: 218 QNDACSAEQSSNINVD-SRNASSGESGMVLTEN----------------TKAKKKEATK- 259
Query: 1604 DYSDVGFTSSVIFSNEFDAAPSETCIVSTQDVSELIAKQLEDVVIAEXXXXXXXXXXXXX 1425
T +F + D +CI S+ I KQLEDVV+ E
Sbjct: 260 -------TPLKMFKQDEDNDMLSSCI------SDSIVKQLEDVVLEEKKDKKKNKAAKGT 306
Query: 1424 XXXXXXXXXKND------EMNFHSTIIMGD----------------SVNIVA---PKTSS 1320
K E++F STIIMGD S +I+A P +S
Sbjct: 307 SRVGKSKPAKRPVGRDGHEVDFTSTIIMGDHGSEMMDHGALGQYNFSSSILANEQPSSSQ 366
Query: 1319 VSSLDCAKQLTNKSDDVAHVRNKIESIGYIGSDNVLSSDRVSSQKEEVLQETG---LKSS 1149
+++D + T + D+ L S+ V+ K+E ++G L+SS
Sbjct: 367 YAAIDSVQAYTEELDE-------------------LFSNAVNIAKDETSDDSGRCTLRSS 407
Query: 1148 LKTSQSKGGNRSVSWADERSNGTLEDKE---VRPKVKEEEDPDXXXXXXXXXXXXXXXXX 978
LK SK RSV WADE NG++ + V K +E D
Sbjct: 408 LKAVGSKNAGRSVKWADE--NGSVLETSRAFVSHSSKSQESMDSSVRRESAEACAAALIE 465
Query: 977 XXXXXXXXXXXXXXXXXXXGIVILP----QPQYG---EGGKSEADDKALEFDQEVLKWPK 819
GI+ILP Q QY + K +++ E D+ V+KWPK
Sbjct: 466 AAEAISSGTSEVEDAVSKAGIIILPDMVNQQQYNNDYDNDKDAGENEIFEIDRGVVKWPK 525
Query: 818 KTVLLDSDMFDVEDSWHDTPPEGFSLTLSSFATMWMALFGWITCSSLAYIYGHDESSQED 639
KTVLLD+DMFDV+DSWHDTPPEGFSLTLSSFATMW ALFGW++ SSLAY+YG DESS ED
Sbjct: 526 KTVLLDTDMFDVDDSWHDTPPEGFSLTLSSFATMWAALFGWVSRSSLAYVYGLDESSMED 585
Query: 638 FLLVNGREYPRKFFLKDGKSSEIRQALDGFICRALPGLVMDLRLPTPVSTLEKFAGRLLD 459
L+ GRE P+K L DG SSEIR+ALD +C ALP LV +LR+ PVS LE G LLD
Sbjct: 586 LLIAGGRECPQKRVLNDGHSSEIRRALDTCVCNALPVLVSNLRMQIPVSKLEITLGYLLD 645
Query: 458 TMSFVDALPSFKMKQWQVIVLLFMEALSVHRLPSLAPQMTSRSMLLHKVLNAAQVSSEEY 279
TMSFVDALPS + +QWQ++VL+ ++ALS+HRLP+LAP M S S LL K+LN+AQVS EEY
Sbjct: 646 TMSFVDALPSLRSRQWQLMVLVLLDALSLHRLPALAPIM-SDSKLLQKLLNSAQVSREEY 704
Query: 278 ETMRDLIMPLGRLPQ 234
++M DL++P GR Q
Sbjct: 705 DSMIDLLLPFGRSTQ 719
>ref|XP_007016926.1| F2P16.20 protein, putative isoform 1 [Theobroma cacao]
gi|508787289|gb|EOY34545.1| F2P16.20 protein, putative
isoform 1 [Theobroma cacao]
Length = 739
Score = 442 bits (1138), Expect = e-121
Identities = 294/756 (38%), Positives = 394/756 (52%), Gaps = 16/756 (2%)
Frame = -1
Query: 2432 ITIASAIHKIQLSLLETPSTPFELLIAASTLLSKPDYDDVITERTISDLCGYPLCPNPLP 2253
I+++ A+HKIQL LL+ +LL A+ +L+S+ DY+DV+TERTIS+ CGYPLC NPLP
Sbjct: 61 ISVSEAVHKIQLHLLDGIRDEKQLL-ASGSLISRSDYEDVVTERTISNTCGYPLCANPLP 119
Query: 2252 SPSDRRRKGKYRVSLSEHKVYDLQETYNYCREECLIGSRALRGSLSDERRADIDVSRVKV 2073
S + RRKG+YR+SL EHKVYDLQETY +C CLI SRA GSL +ER + ++ K+
Sbjct: 120 S--EPRRKGRYRISLKEHKVYDLQETYMFCSTNCLINSRAFAGSLQEERCSVLN--HAKL 175
Query: 2072 EEVLRLFGYFXXXXXXXXXEKNSGRLVNLKLEIKEKEGGSAGDVKLDEWIGPSNAIEGYV 1893
++L LFG +G L L IKE E A DV L GPSNAIEGYV
Sbjct: 176 NDILSLFGDLDLDDNDLG---KNGDLGFSNLRIKENEEVKAEDVSL---AGPSNAIEGYV 229
Query: 1892 PQLNQGSKFASNLESVQGIDGAKSREVDFKAVTVGDKTDGVHSTESSALTSDLSQMIAKK 1713
PQ RE+ K + + V + SS L S +
Sbjct: 230 PQ----------------------RELISKPTPPKNNKNKVFDSSSSKLGSKKEEYFVNN 267
Query: 1712 LEDVVITEXXXXXXXXXXXXXXXXPTDATNNDIDKVDY--SDVGFTSSVIFSNEFDAAPS 1539
D T D T K D+ +++ FTS +I ++E+ +
Sbjct: 268 ELDFAGTIIMNDEYIISKKPGSFKQGDRTKLSSKKEDFVINEMDFTSEIIMNDEYTISKM 327
Query: 1538 ETCIVSTQDVSELIAKQLEDVVIAEXXXXXXXXXXXXXXXXXXXXXXKNDEMNFHSTIIM 1359
+ S Q + K++E+ I + + ++
Sbjct: 328 PSG--SKQSCFDSNLKEVEEKGICK---------------------------DSEDKCVI 358
Query: 1358 GDSVNIVAPKTSSVSSLDCAKQLTNKSDDVAHVRNKIESIGYIGSDNVLSSDRVSSQKEE 1179
S + + K SS+ L K + D + + E+ + K
Sbjct: 359 SGSSSALREKDSSIVELPSTKNVYQSGLDTSSAEAEKET---------------HADKAV 403
Query: 1178 VLQETGLKSSLKTSQSKGGNRSVSWADERS-----NGTLEDKEVRPKVK---------EE 1041
ET LKSSLK++ +K NR V+WAD++ NG L + + +K E+
Sbjct: 404 TSSETVLKSSLKSAGAKKLNRFVTWADKKKADNAGNGNLCEVKEMETMKGDSEISGSAED 463
Query: 1040 EDPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVILPQPQYGEGGKSEADD 861
D G++ILP + + D
Sbjct: 464 GGDDNMLRFVSAEACAMALSKAAEAVASGDSDVTDAVYENGLIILPSLCEVDKEEPMEDG 523
Query: 860 KALEFDQEVLKWPKKTVLLDSDMFDVEDSWHDTPPEGFSLTLSSFATMWMALFGWITCSS 681
LE + +KWPKK + SDMF+ EDSW D PPEGFSLTLS+FATMW ALF WIT SS
Sbjct: 524 DMLEPETAPVKWPKKPGIPHSDMFNPEDSWFDAPPEGFSLTLSTFATMWNALFEWITSSS 583
Query: 680 LAYIYGHDESSQEDFLLVNGREYPRKFFLKDGKSSEIRQALDGFICRALPGLVMDLRLPT 501
LAYIYG DES E++L +NGREYPRK L+DG+SSEI++ L I RALP +V DLRLP
Sbjct: 584 LAYIYGRDESFHEEYLSINGREYPRKIALRDGRSSEIKETLASCISRALPAIVTDLRLPI 643
Query: 500 PVSTLEKFAGRLLDTMSFVDALPSFKMKQWQVIVLLFMEALSVHRLPSLAPQMTSRSMLL 321
P+STLE+ G L+DT+SF++ALP+F+MKQWQVIVLLF++ALSV R+P+L P MT+ MLL
Sbjct: 644 PISTLEQGMGHLIDTISFMEALPAFRMKQWQVIVLLFIDALSVCRIPALTPHMTNGRMLL 703
Query: 320 HKVLNAAQVSSEEYETMRDLIMPLGRLPQFSMQRGA 213
HKVL+ AQ+S EEYE M+DLI+PLGR P FS Q GA
Sbjct: 704 HKVLDGAQISMEEYEVMKDLIIPLGRAPHFSAQSGA 739
>sp|Q6AVZ9.1|RPAP2_ORYSJ RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog; AltName: Full=RNA polymerase II-associated
protein 2 homolog gi|51038243|gb|AAT94046.1| unknown
protein [Oryza sativa Japonica Group]
gi|222630100|gb|EEE62232.1| hypothetical protein
OsJ_17019 [Oryza sativa Japonica Group]
Length = 726
Score = 440 bits (1131), Expect = e-120
Identities = 305/781 (39%), Positives = 409/781 (52%), Gaps = 47/781 (6%)
Frame = -1
Query: 2435 PITIASAIHKIQLSLLETPSTPFE-LLIAASTLLSKPDYDDVITERTISDLCGYPLCPNP 2259
P T+ASA+H++Q++L + + E LL AA++LLS PDY DV+TER+I+D CGYP CPNP
Sbjct: 15 PTTVASAVHRVQMALYDGAAASREPLLRAAASLLSGPDYADVVTERSIADACGYPACPNP 74
Query: 2258 LPSPSDRRRKG-KYRVSLSEHKVYDLQETYNYCREECLIGSRALRGSLSDERRADIDVSR 2082
LPS R + ++R+SL EH+VYDL+E +C E CL+ S A SL +R VS
Sbjct: 75 LPSEDARGKAAPRFRISLREHRVYDLEEARKFCSERCLVASAAFGASLPPDR--PFGVSP 132
Query: 2081 VKVEEVLRLF-----GYFXXXXXXXXXEKNSGRLVN--LKLEIKEKEGGSAGDVKLDEWI 1923
+++ ++ LF G G+ V K+EI EKE G+V L EWI
Sbjct: 133 DRLDALVALFEGGGGGGDDGGLALGFGASGDGKEVEEGRKVEIMEKEAAGTGEVTLQEWI 192
Query: 1922 GPSNAIEGYVPQLNQGSKFASNLESVQGIDGAKSREVDFKAVTVGDKTDGVHSTESSALT 1743
GPS+AIEGYVP+ ++ + G +E + D + +SS +
Sbjct: 193 GPSDAIEGYVPRRDR-------------VVGGPKKEAK--------QNDACSAEQSSNIN 231
Query: 1742 SDLSQMIAKKLEDVVITEXXXXXXXXXXXXXXXXPTDATNNDIDKVDYSDVGFTSSVIFS 1563
D S+ + +V+TE T A + K T +F
Sbjct: 232 VD-SRNASSGESGMVLTEN----------------TKAKKKEATK--------TPLKMFK 266
Query: 1562 NEFDAAPSETCIVSTQDVSELIAKQLEDVVIAEXXXXXXXXXXXXXXXXXXXXXXKND-- 1389
+ D +CI S+ I KQLEDVV+ E K
Sbjct: 267 QDEDNDMLSSCI------SDSIVKQLEDVVLEEKKDKKKNKAAKGTSRVGKSKPAKRPVG 320
Query: 1388 ----EMNFHSTIIMGD----------------SVNIVA---PKTSSVSSLDCAKQLTNKS 1278
E++F STIIMGD S +I+A P +S +++D + T +
Sbjct: 321 RDGHEVDFTSTIIMGDRGSEMMDHGALGQYNFSSSILANEQPSSSQYAAIDSVQAYTEEL 380
Query: 1277 DDVAHVRNKIESIGYIGSDNVLSSDRVSSQKEEVLQETG---LKSSLKTSQSKGGNRSVS 1107
D+ L S+ V+ K+E ++G L+SSLK SK SV
Sbjct: 381 DE-------------------LFSNAVNIAKDETSDDSGRCTLRSSLKAVGSKNAGHSVK 421
Query: 1106 WADERSNGTLEDKE---VRPKVKEEEDPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 936
WADE NG++ + V K +E D
Sbjct: 422 WADE--NGSVLETSRAFVSHSSKSQESMDSSVRRESAEACAAALIEAAEAISSGTSEVED 479
Query: 935 XXXXXGIVILP----QPQYG---EGGKSEADDKALEFDQEVLKWPKKTVLLDSDMFDVED 777
GI+ILP Q QY + K +++ E D+ V+KWPKKTVLLD+DMFDV+D
Sbjct: 480 AVSKAGIIILPDMVNQQQYNNDYDNDKDAGENEIFEIDRGVVKWPKKTVLLDTDMFDVDD 539
Query: 776 SWHDTPPEGFSLTLSSFATMWMALFGWITCSSLAYIYGHDESSQEDFLLVNGREYPRKFF 597
SWHDTPPEGFSLTLSSFATMW ALFGW++ SSLAY+YG DESS ED L+ GRE P+K
Sbjct: 540 SWHDTPPEGFSLTLSSFATMWAALFGWVSRSSLAYVYGLDESSMEDLLIAGGRECPQKRV 599
Query: 596 LKDGKSSEIRQALDGFICRALPGLVMDLRLPTPVSTLEKFAGRLLDTMSFVDALPSFKMK 417
L DG SSEIR+ALD +C ALP LV +LR+ PVS LE G LLDTMSFVDALPS + +
Sbjct: 600 LNDGHSSEIRRALDTCVCNALPVLVSNLRMQIPVSKLEITLGYLLDTMSFVDALPSLRSR 659
Query: 416 QWQVIVLLFMEALSVHRLPSLAPQMTSRSMLLHKVLNAAQVSSEEYETMRDLIMPLGRLP 237
QWQ++VL+ ++ALS+HRLP+LAP M S S LL K+LN+AQVS EEY++M DL++P GR
Sbjct: 660 QWQLMVLVLLDALSLHRLPALAPIM-SDSKLLQKLLNSAQVSREEYDSMIDLLLPFGRST 718
Query: 236 Q 234
Q
Sbjct: 719 Q 719
>ref|XP_012479683.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog isoform X1 [Gossypium raimondii]
gi|823159708|ref|XP_012479685.1| PREDICTED: putative RNA
polymerase II subunit B1 CTD phosphatase RPAP2 homolog
isoform X1 [Gossypium raimondii]
gi|823159710|ref|XP_012479686.1| PREDICTED: putative RNA
polymerase II subunit B1 CTD phosphatase RPAP2 homolog
isoform X1 [Gossypium raimondii]
gi|823159712|ref|XP_012479687.1| PREDICTED: putative RNA
polymerase II subunit B1 CTD phosphatase RPAP2 homolog
isoform X1 [Gossypium raimondii]
gi|823159714|ref|XP_012479688.1| PREDICTED: putative RNA
polymerase II subunit B1 CTD phosphatase RPAP2 homolog
isoform X1 [Gossypium raimondii]
gi|763764410|gb|KJB31664.1| hypothetical protein
B456_005G200700 [Gossypium raimondii]
gi|763764411|gb|KJB31665.1| hypothetical protein
B456_005G200700 [Gossypium raimondii]
gi|763764412|gb|KJB31666.1| hypothetical protein
B456_005G200700 [Gossypium raimondii]
gi|763764413|gb|KJB31667.1| hypothetical protein
B456_005G200700 [Gossypium raimondii]
gi|763764414|gb|KJB31668.1| hypothetical protein
B456_005G200700 [Gossypium raimondii]
Length = 708
Score = 431 bits (1108), Expect = e-117
Identities = 295/786 (37%), Positives = 409/786 (52%), Gaps = 46/786 (5%)
Frame = -1
Query: 2432 ITIASAIHKIQLSLLETPSTPFELLIAASTLLSKPDYDDVITERTISDLCGYPLCPNPLP 2253
I+++ A+HKIQL LL+ +L I++ +L+S+ DY+DV+TER+IS+ CGYPLC NPLP
Sbjct: 14 ISVSEAVHKIQLHLLDGIRDEKQL-ISSGSLISRSDYEDVVTERSISNTCGYPLCQNPLP 72
Query: 2252 SPSDRRRKGKYRVSLSEHKVYDLQETYNYCREECLIGSRALRGSLSDERRADIDVSRVKV 2073
S + RR+G+YR+SL EH+VYDLQET +C +CLI SRA GSL +ER + ++ K+
Sbjct: 73 S--EPRRRGRYRISLKEHRVYDLQETSRFCSADCLINSRAFAGSLQEERCSVLN--HAKL 128
Query: 2072 EEVLRLFGYFXXXXXXXXXEKNSGRLVNLKLEIKEKEGGSAGDVKLDEWIGPSNAIEGYV 1893
+L LF +G L L+IKE E AG+V +GPSNAIEGYV
Sbjct: 129 NAILSLFD---DVDLNDEDLGKNGDLGFSNLKIKENEEIKAGEVSS---VGPSNAIEGYV 182
Query: 1892 PQLNQGSKFASNLESVQGI-DGAKSREVDFKAVTVGDKTDGVHSTESSALTSDLSQMIAK 1716
PQ SK +S+ S G+ D + S+ D K
Sbjct: 183 PQRELVSKPSSSKNSKNGVFDSSSSKLGDIKG---------------------------- 214
Query: 1715 KLEDVVITEXXXXXXXXXXXXXXXXPTDATNNDIDKVDYSDVGFTSSVIFSNEFDAAPSE 1536
D + D T+ I +Y D FTS+VI +NE+ + +
Sbjct: 215 ---DYFVNNEI----------------DFTSAVIMNNEYLD--FTSAVIMNNEYTTSKNP 253
Query: 1535 TCIVSTQDVSELIAKQLEDVVIAEXXXXXXXXXXXXXXXXXXXXXXKNDEMNFHSTIIMG 1356
+ +Q ++DV+ +EM+F S IIM
Sbjct: 254 GSLRQSQRTKP---SSMKDVI---------------------------NEMDFTSEIIMN 283
Query: 1355 DSVNIV-----APKTSSVSSL-------------------DCAKQLTNKSDDVAHVRNKI 1248
D + + + SS S L + + LT + + + +
Sbjct: 284 DEYTVSKTPPGSRQGSSGSKLKKTEGQGVCKDFEEKCMRSESSSALTKEDSGIVEMPST- 342
Query: 1247 ESIGYIGSDNVLSSDRVSSQKEEVLQETG--LKSSLKTSQSKGGNRSVSWADERS----- 1089
+ + G D + + + ++ + +G LKSSLK++ +K NRSV+WAD+++
Sbjct: 343 KCVDQSGLDTINAEAEKETHSDKAVASSGVVLKSSLKSAGAKKLNRSVTWADKKNVDGAR 402
Query: 1088 NGTL----------EDKEVRPKVKEEEDPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 939
G+L D E + ++ +D D
Sbjct: 403 KGSLCEVKEMDAQKGDSENLGRAEDGDDDDNMLRFASAEACAMALSEAAAAVASGDSDVN 462
Query: 938 XXXXXXGIVILPQPQYGEGGKSEADDKALEFDQEV----LKWPKKTVLLDSDMFDVEDSW 771
G++IL P + + + LE + E +KWP K + SD FD EDSW
Sbjct: 463 DAVSEAGLIILAHPLEADKEEKVENIDTLEAEPEPEEGPVKWPTKPGIPRSDFFDPEDSW 522
Query: 770 HDTPPEGFSLTLSSFATMWMALFGWITCSSLAYIYGHDESSQEDFLLVNGREYPRKFFLK 591
D PPEGFSLTLS+FATMW ALF WIT SSLAYIYG DE+ E++L VNGREYP+K L+
Sbjct: 523 FDAPPEGFSLTLSTFATMWNALFEWITSSSLAYIYGRDETFHEEYLSVNGREYPQKIVLR 582
Query: 590 DGKSSEIRQALDGFICRALPGLVMDLRLPTPVSTLEKFAGRLLDTMSFVDALPSFKMKQW 411
DG+SSEI++ L G I RA P +V LRLP P+STLE+ GRLLDTMSFV+ALP+F+MKQW
Sbjct: 583 DGRSSEIKETLAGCISRAFPAIVTALRLPIPISTLEQGMGRLLDTMSFVEALPAFRMKQW 642
Query: 410 QVIVLLFMEALSVHRLPSLAPQMTSRSMLLHKVLNAAQVSSEEYETMRDLIMPLGRLPQF 231
QVIVLL ++ALSV R+P+L P MT+ MLLHKVL+ AQ+S EEYE M+DLI+PLGR P F
Sbjct: 643 QVIVLLLIDALSVCRIPALTPHMTNGRMLLHKVLDGAQISMEEYEVMKDLIIPLGRAPHF 702
Query: 230 SMQRGA 213
S Q GA
Sbjct: 703 SAQSGA 708
>ref|XP_012479689.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog isoform X2 [Gossypium raimondii]
Length = 695
Score = 428 bits (1101), Expect = e-117
Identities = 295/785 (37%), Positives = 407/785 (51%), Gaps = 45/785 (5%)
Frame = -1
Query: 2432 ITIASAIHKIQLSLLETPSTPFELLIAASTLLSKPDYDDVITERTISDLCGYPLCPNPLP 2253
I+++ A+HKIQL LL+ +L I++ +L+S+ DY+DV+TER+IS+ CGYPLC NPLP
Sbjct: 14 ISVSEAVHKIQLHLLDGIRDEKQL-ISSGSLISRSDYEDVVTERSISNTCGYPLCQNPLP 72
Query: 2252 SPSDRRRKGKYRVSLSEHKVYDLQETYNYCREECLIGSRALRGSLSDERRADIDVSRVKV 2073
S + RR+G+YR+SL EH+VYDLQET +C +CLI SRA GSL +ER + ++ K+
Sbjct: 73 S--EPRRRGRYRISLKEHRVYDLQETSRFCSADCLINSRAFAGSLQEERCSVLN--HAKL 128
Query: 2072 EEVLRLFGYFXXXXXXXXXEKNSGRLVNLKLEIKEKEGGSAGDVKLDEWIGPSNAIEGYV 1893
+L LF +G L L+IKE E AG+V +GPSNAIEGYV
Sbjct: 129 NAILSLFD---DVDLNDEDLGKNGDLGFSNLKIKENEEIKAGEVSS---VGPSNAIEGYV 182
Query: 1892 PQLNQGSKFASNLESVQGIDGAKSREVDFKAVTVGDKTDGVHSTESSALTSDLSQMIAKK 1713
PQ SK +S+ S +GV + SS K
Sbjct: 183 PQRELVSKPSSSKNS----------------------KNGVFDSSSS------------K 208
Query: 1712 LEDVVITEXXXXXXXXXXXXXXXXPTDATNNDIDKVDYSDVGFTSSVIFSNEFDAAPSET 1533
L D+ NN+ID FTS+VI +NE+ + +
Sbjct: 209 LGDI-------------------KGDYFVNNEID--------FTSAVIMNNEYTTSKNPG 241
Query: 1532 CIVSTQDVSELIAKQLEDVVIAEXXXXXXXXXXXXXXXXXXXXXXKNDEMNFHSTIIMGD 1353
+ +Q ++DV+ +EM+F S IIM D
Sbjct: 242 SLRQSQRTKP---SSMKDVI---------------------------NEMDFTSEIIMND 271
Query: 1352 SVNIV-----APKTSSVSSL-------------------DCAKQLTNKSDDVAHVRNKIE 1245
+ + + SS S L + + LT + + + + +
Sbjct: 272 EYTVSKTPPGSRQGSSGSKLKKTEGQGVCKDFEEKCMRSESSSALTKEDSGIVEMPST-K 330
Query: 1244 SIGYIGSDNVLSSDRVSSQKEEVLQETG--LKSSLKTSQSKGGNRSVSWADERS-----N 1086
+ G D + + + ++ + +G LKSSLK++ +K NRSV+WAD+++
Sbjct: 331 CVDQSGLDTINAEAEKETHSDKAVASSGVVLKSSLKSAGAKKLNRSVTWADKKNVDGARK 390
Query: 1085 GTL----------EDKEVRPKVKEEEDPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 936
G+L D E + ++ +D D
Sbjct: 391 GSLCEVKEMDAQKGDSENLGRAEDGDDDDNMLRFASAEACAMALSEAAAAVASGDSDVND 450
Query: 935 XXXXXGIVILPQPQYGEGGKSEADDKALEFDQEV----LKWPKKTVLLDSDMFDVEDSWH 768
G++IL P + + + LE + E +KWP K + SD FD EDSW
Sbjct: 451 AVSEAGLIILAHPLEADKEEKVENIDTLEAEPEPEEGPVKWPTKPGIPRSDFFDPEDSWF 510
Query: 767 DTPPEGFSLTLSSFATMWMALFGWITCSSLAYIYGHDESSQEDFLLVNGREYPRKFFLKD 588
D PPEGFSLTLS+FATMW ALF WIT SSLAYIYG DE+ E++L VNGREYP+K L+D
Sbjct: 511 DAPPEGFSLTLSTFATMWNALFEWITSSSLAYIYGRDETFHEEYLSVNGREYPQKIVLRD 570
Query: 587 GKSSEIRQALDGFICRALPGLVMDLRLPTPVSTLEKFAGRLLDTMSFVDALPSFKMKQWQ 408
G+SSEI++ L G I RA P +V LRLP P+STLE+ GRLLDTMSFV+ALP+F+MKQWQ
Sbjct: 571 GRSSEIKETLAGCISRAFPAIVTALRLPIPISTLEQGMGRLLDTMSFVEALPAFRMKQWQ 630
Query: 407 VIVLLFMEALSVHRLPSLAPQMTSRSMLLHKVLNAAQVSSEEYETMRDLIMPLGRLPQFS 228
VIVLL ++ALSV R+P+L P MT+ MLLHKVL+ AQ+S EEYE M+DLI+PLGR P FS
Sbjct: 631 VIVLLLIDALSVCRIPALTPHMTNGRMLLHKVLDGAQISMEEYEVMKDLIIPLGRAPHFS 690
Query: 227 MQRGA 213
Q GA
Sbjct: 691 AQSGA 695
>gb|KHG00854.1| hypothetical protein F383_23706 [Gossypium arboreum]
Length = 729
Score = 424 bits (1090), Expect = e-115
Identities = 296/784 (37%), Positives = 407/784 (51%), Gaps = 47/784 (5%)
Frame = -1
Query: 2432 ITIASAIHKIQLSLLETPSTPFELLIAASTLLSKPDYDDVITERTISDLCGYPLCPNPLP 2253
I+++ A+HKIQL LL+ +L I++ +L+S+ DY+DVITER+IS+ CGYPLC NPLP
Sbjct: 14 ISVSEAVHKIQLHLLDGIRDEKQL-ISSGSLISRSDYEDVITERSISNTCGYPLCQNPLP 72
Query: 2252 SPSDRRRKGKYRVSLSEHKVYDLQETYNYCREECLIGSRALRGSLSDERRADIDVSRVKV 2073
S + RR+G+YR+SL EH+VYDLQET +C +CLI SRA GSL +ER + ++ K+
Sbjct: 73 S--EPRRRGRYRISLKEHRVYDLQETSRFCLADCLINSRAFAGSLQEERCSVLN--HAKL 128
Query: 2072 EEVLRLFGYFXXXXXXXXXEKNSGRLVNLKLEIKEKEGGSAGDVKLDEWIGPSNAIEGYV 1893
+L LF +G L L+IKE E AG++ +GPSNAIEGYV
Sbjct: 129 NAILSLFD---DVDLNDKDLGKNGDLGFSNLKIKENEEIKAGEISS---VGPSNAIEGYV 182
Query: 1892 PQLNQGSKFASNLESVQGIDGAKSREVDFKAVTVGDKTDGVHSTESSALTSDLSQMIAKK 1713
PQ SK +S+ S +GV + SS K
Sbjct: 183 PQRELVSKPSSSKNS----------------------KNGVFDSSSS------------K 208
Query: 1712 LEDVVITEXXXXXXXXXXXXXXXXPTDATNNDIDKVDYSDVGFTSSVIFSNEFDAAPSET 1533
L D+ NN+ID FTS+VI +NE+ + +
Sbjct: 209 LGDI-------------------KGDYFVNNEID--------FTSAVIMNNEYTTSKNPG 241
Query: 1532 CIVSTQDVSELIAKQLEDVVIAEXXXXXXXXXXXXXXXXXXXXXXKNDEMNFHSTIIMGD 1353
+ +Q ++DV+ +EM+F S IIM D
Sbjct: 242 SLRQSQRTKP---SSMKDVI---------------------------NEMDFTSEIIMND 271
Query: 1352 SVNIV-----APKTSSVSSLD-------------------CAKQLTNKSDDVAHVRNKIE 1245
+ + + SS S L+ + LT + + + + +
Sbjct: 272 EYTVSKTPPGSRQGSSGSKLEKTEGKGVCKDFEEKCMRSESSSALTKEDSGIVQMPST-K 330
Query: 1244 SIGYIGSDNVLSSDRVSSQKEEVLQETG--LKSSLKTSQSKGGNRSVSWADERS-----N 1086
+ G D + + + ++ + +G LKSSLK + +K NRSV+WAD+++
Sbjct: 331 CVDQSGLDTINAEAEKETHSDKAMASSGVVLKSSLKPAGAKKLNRSVTWADKKNVDSARK 390
Query: 1085 GTL-EDKEV-----------RPKVKEEEDPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 942
G+L E KE+ R + + +D
Sbjct: 391 GSLCEVKEMDAQKGDSENIGRAEDGDADDKMLRFASAEACAMALSKAAAAAAVASGDSDV 450
Query: 941 XXXXXXXGIVILPQPQYGEGGKSEADDKALEFDQEV----LKWPKKTVLLDSDMFDVEDS 774
G++ILP P + + + LE D E +KWP K + SD FD EDS
Sbjct: 451 NDAVSEAGLIILPHPLEADKEEKVENIDTLEADPEPEEGPVKWPTKPGIPRSDFFDPEDS 510
Query: 773 WHDTPPEGFSLTLSSFATMWMALFGWITCSSLAYIYGHDESSQEDFLLVNGREYPRKFFL 594
W D PPEGFSLTLS+FATMW ALF WIT SSLAYIYG DE+ E++L VNGREYP+K L
Sbjct: 511 WFDAPPEGFSLTLSTFATMWNALFEWITSSSLAYIYGRDETFHEEYLSVNGREYPQKIVL 570
Query: 593 KDGKSSEIRQALDGFICRALPGLVMDLRLPTPVSTLEKFAGRLLDTMSFVDALPSFKMKQ 414
+DG+SSEI++ L G I RALP +V LRLP P+STLE+ GRLLDTMSFV+ALP+F+MKQ
Sbjct: 571 RDGRSSEIKETLAGCISRALPAIVTALRLPIPISTLEQGMGRLLDTMSFVEALPAFRMKQ 630
Query: 413 WQVIVLLFMEALSVHRLPSLAPQMTSRSMLLHKVLNAAQVSSEEYETMRDLIMPLGRLPQ 234
WQV+VLL ++ALSV R+P+L P MT+ MLLHKVL+ AQ+S EEYE M+DLI+PLGR P
Sbjct: 631 WQVLVLLLIDALSVCRIPALTPHMTNGRMLLHKVLDGAQISLEEYEVMKDLIIPLGRAPH 690
Query: 233 FSMQ 222
FS Q
Sbjct: 691 FSAQ 694
>ref|XP_002321396.2| hypothetical protein POPTR_0015s01330g [Populus trichocarpa]
gi|550321730|gb|EEF05523.2| hypothetical protein
POPTR_0015s01330g [Populus trichocarpa]
Length = 696
Score = 422 bits (1085), Expect = e-115
Identities = 287/755 (38%), Positives = 399/755 (52%), Gaps = 17/755 (2%)
Frame = -1
Query: 2426 IASAIHKIQLSLLETPSTPFELLIAASTLLSKPDYDDVITERTISDLCGYPLCPNPLPSP 2247
+ I+K+QLSLL+ +LL AA +++S DY+DV+TERTI++LCGYPLC N LPS
Sbjct: 9 VKDTIYKLQLSLLDGIQNEDQLL-AAGSIMSHSDYEDVVTERTIANLCGYPLCGNSLPS- 66
Query: 2246 SDRRRKGKYRVSLSEHKVYDLQETYNYCREECLIGSRALRGSLSDERRADIDVSRVKVEE 2067
DR +KG+YR+SL EHKVYDL ETY YC C+I SR GSL +ER + ++ K+ E
Sbjct: 67 -DRPQKGRYRISLKEHKVYDLHETYMYCSSSCVINSRTFSGSLQEER--CLVLNPAKLNE 123
Query: 2066 VLRLFGYFXXXXXXXXXEKNSGRLVNLKLEIKEKEGGSAGDVKLDEWIGPSNAIEGYVPQ 1887
VL LF F + NLK+E EK G+V ++WIGPSNAIEGYVPQ
Sbjct: 124 VLMLFDNFSLGSEGSLGKNGDLGFSNLKIE--EKTEKVEGEVSFEQWIGPSNAIEGYVPQ 181
Query: 1886 LNQGSKFASNLESVQGIDGAKSREVDFKAVTVGDKTDGVHSTESSALTSDLSQMIAKKLE 1707
++ LE ID ++DF + + + T S ++ + K
Sbjct: 182 RDR-------LEEDFIID-----DMDFTSSIITQDEYSISKTPSGLTDTNTDKKTQK--- 226
Query: 1706 DVVITEXXXXXXXXXXXXXXXXPTDATNNDIDKVDY-SDVGFTSSVIFS-NEFDAAPSET 1533
T + + +D+ FTS++I + +E+ + S +
Sbjct: 227 ---------PKAKGSHKGSKGSKAKGTKQSSKQESFINDMNFTSTIIITQDEYSISKSPS 277
Query: 1532 CIVSTQDVSELIAKQLEDVVIAEXXXXXXXXXXXXXXXXXXXXXXKNDEMNFHSTIIMGD 1353
+ T ++ I KQ E V K+ E +T +G
Sbjct: 278 GLAGTTSKTK-IQKQKEKV------------------------SQKSSENQSSATRKVGS 312
Query: 1352 SVNIVAPKTSSVSSLDCAKQLTNKSDDVAHVRNKIESIGYIGSDNVLSSDRVSSQKEEVL 1173
S KTS D +K + + +S S + + + S E+
Sbjct: 313 S------KTSRKVKEDRSKVAIKDELSSQDLSSPFDSC-QTSSITITAEAKEKSVSEKAA 365
Query: 1172 Q--ETGLKSSLKTSQSKGGNRSVSWADER--SNGT--------LEDKEVRPKVK---EEE 1038
+ E+ LK SLKTS +K RSV+WADE+ S+G+ +ED + P++ ++
Sbjct: 366 KPVESSLKPSLKTSGAKQLTRSVTWADEKVGSSGSRDLCEVRGMEDTKAGPEIVDNIDKR 425
Query: 1037 DPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVILPQPQYGEGGKSEADDK 858
D G+VILPQP + G D
Sbjct: 426 DDGYVSKFESAEACAKALSQAAEAVASGDADASNALSEAGLVILPQPHDLDQGDPMEDVD 485
Query: 857 ALEFDQEVLKWPKKTVLLDSDMFDVEDSWHDTPPEGFSLTLSSFATMWMALFGWITCSSL 678
L+ + +KWP K + S+ FD E+SW+D PPEGFSL LSSFAT+WMALF W+T SSL
Sbjct: 486 VLDEESSTIKWPGKPGIPQSECFDPENSWYDAPPEGFSLELSSFATIWMALFAWVTSSSL 545
Query: 677 AYIYGHDESSQEDFLLVNGREYPRKFFLKDGKSSEIRQALDGFICRALPGLVMDLRLPTP 498
AY+YG DESS E++L+VNGREYPRK L DG+S EI+Q ++G + RA P +V DLRLP P
Sbjct: 546 AYVYGKDESSHEEYLMVNGREYPRKIVLGDGRSFEIQQTIEGCLGRAFPVVVADLRLPIP 605
Query: 497 VSTLEKFAGRLLDTMSFVDALPSFKMKQWQVIVLLFMEALSVHRLPSLAPQMTSRSMLLH 318
+STLE+ A LL TMSFVDA+P+F+MKQWQVI LLF+EALSV R+P+L M +R M
Sbjct: 606 ISTLEQGAANLLGTMSFVDAVPAFRMKQWQVIALLFIEALSVCRIPALISYMDNRRM--- 662
Query: 317 KVLNAAQVSSEEYETMRDLIMPLGRLPQFSMQRGA 213
V++ ++S+EEYE M+DL++PLGR PQFS Q GA
Sbjct: 663 -VVDGVRMSAEEYEVMKDLMIPLGRAPQFSPQSGA 696
>gb|KHG00855.1| hypothetical protein F383_23706 [Gossypium arboreum]
Length = 708
Score = 419 bits (1077), Expect = e-114
Identities = 298/798 (37%), Positives = 409/798 (51%), Gaps = 58/798 (7%)
Frame = -1
Query: 2432 ITIASAIHKIQLSLLETPSTPFELLIAASTLLSKPDYDDVITERTISDLCGYPLCPNPLP 2253
I+++ A+HKIQL LL+ +L I++ +L+S+ DY+DVITER+IS+ CGYPLC NPLP
Sbjct: 14 ISVSEAVHKIQLHLLDGIRDEKQL-ISSGSLISRSDYEDVITERSISNTCGYPLCQNPLP 72
Query: 2252 SPSDRRRKGKYRVSLSEHKVYDLQETYNYCREECLIGSRALRGSLSDERRADIDVSRVKV 2073
S + RR+G+YR+SL EH+VYDLQET +C +CLI SRA GSL +ER + ++ K+
Sbjct: 73 S--EPRRRGRYRISLKEHRVYDLQETSRFCLADCLINSRAFAGSLQEERCSVLN--HAKL 128
Query: 2072 EEVLRLFGYFXXXXXXXXXEKNSGRLVNLKLEIKEKEGGSAGDVKLDEWIGPSNAIEGYV 1893
+L LF +G L L+IKE E AG++ +GPSNAIEGYV
Sbjct: 129 NAILSLFD---DVDLNDKDLGKNGDLGFSNLKIKENEEIKAGEISS---VGPSNAIEGYV 182
Query: 1892 PQLNQGSKFASNLESVQGIDGAKSREVDFKAVTVGDKTDGVHSTESSALTSDLSQMIAKK 1713
PQ SK +S+ S +GV + SS K
Sbjct: 183 PQRELVSKPSSSKNS----------------------KNGVFDSSSS------------K 208
Query: 1712 LEDVVITEXXXXXXXXXXXXXXXXPTDATNNDIDKVDYSDVGFTSSVIFSNEFDAAPSET 1533
L D+ NN+ID FTS+VI +NE+ + +
Sbjct: 209 LGDI-------------------KGDYFVNNEID--------FTSAVIMNNEYTTSKNPG 241
Query: 1532 CIVSTQDVSELIAKQLEDVVIAEXXXXXXXXXXXXXXXXXXXXXXKNDEMNFHSTIIMGD 1353
+ +Q ++DV+ +EM+F S IIM D
Sbjct: 242 SLRQSQRTKP---SSMKDVI---------------------------NEMDFTSEIIMND 271
Query: 1352 SVNIV-----APKTSSVSSLD-------------------CAKQLTNKSDDVAHVRNKIE 1245
+ + + SS S L+ + LT + + + + +
Sbjct: 272 EYTVSKTPPGSRQGSSGSKLEKTEGKGVCKDFEEKCMRSESSSALTKEDSGIVQMPST-K 330
Query: 1244 SIGYIGSDNVLSSDRVSSQKEEVLQETG--LKSSLKTSQSKGGNRSVSWADERS-----N 1086
+ G D + + + ++ + +G LKSSLK + +K NRSV+WAD+++
Sbjct: 331 CVDQSGLDTINAEAEKETHSDKAMASSGVVLKSSLKPAGAKKLNRSVTWADKKNVDSARK 390
Query: 1085 GTL-EDKEV-----------RPKVKEEEDPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 942
G+L E KE+ R + + +D
Sbjct: 391 GSLCEVKEMDAQKGDSENIGRAEDGDADDKMLRFASAEACAMALSKAAAAAAVASGDSDV 450
Query: 941 XXXXXXXGIVILPQPQYGEGGKSEADDKALEFDQEV----LKWPKKTVLLDSDMFDVEDS 774
G++ILP P + + + LE D E +KWP K + SD FD EDS
Sbjct: 451 NDAVSEAGLIILPHPLEADKEEKVENIDTLEADPEPEEGPVKWPTKPGIPRSDFFDPEDS 510
Query: 773 WHDTPPEGFSLT-----------LSSFATMWMALFGWITCSSLAYIYGHDESSQEDFLLV 627
W D PPEGFSLT LS+FATMW ALF WIT SSLAYIYG DE+ E++L V
Sbjct: 511 WFDAPPEGFSLTVSLIDGQECHKLSTFATMWNALFEWITSSSLAYIYGRDETFHEEYLSV 570
Query: 626 NGREYPRKFFLKDGKSSEIRQALDGFICRALPGLVMDLRLPTPVSTLEKFAGRLLDTMSF 447
NGREYP+K L+DG+SSEI++ L G I RALP +V LRLP P+STLE+ GRLLDTMSF
Sbjct: 571 NGREYPQKIVLRDGRSSEIKETLAGCISRALPAIVTALRLPIPISTLEQGMGRLLDTMSF 630
Query: 446 VDALPSFKMKQWQVIVLLFMEALSVHRLPSLAPQMTSRSMLLHKVLNAAQVSSEEYETMR 267
V+ALP+F+MKQWQV+VLL ++ALSV R+P+L P MT+ MLLHKVL+ AQ+S EEYE M+
Sbjct: 631 VEALPAFRMKQWQVLVLLLIDALSVCRIPALTPHMTNGRMLLHKVLDGAQISLEEYEVMK 690
Query: 266 DLIMPLGRLPQFSMQRGA 213
DLI+PLGR P FS Q GA
Sbjct: 691 DLIIPLGRAPHFSAQSGA 708
>ref|XP_009389521.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog [Musa acuminata subsp. malaccensis]
Length = 668
Score = 389 bits (1000), Expect = e-105
Identities = 231/462 (50%), Positives = 288/462 (62%), Gaps = 11/462 (2%)
Frame = -1
Query: 1595 DVGFTSSVIFSNEFDAAPSETCIVSTQDVSELIAKQLEDVVIAEXXXXXXXXXXXXXXXX 1416
+V F S+VI NE D + T D SE IAK+LE+V++ E
Sbjct: 207 EVEFESAVILENEDDGLAYSSR--GTVDASEAIAKKLEEVLLEEKKAKTTKSASKSSKSK 264
Query: 1415 XXXXXXKND--EMNFHSTIIMGDSVNIVAPKTSSVSSLDCAKQLTNKSDDVAHVRNKIES 1242
KN ++ F STII+G+ V P SS ++ + K + V + I
Sbjct: 265 ASKHSKKNKTHKVEFMSTIIVGEQV----PPGSSAAAQNTPKLDYTSTTFVGDKESLISE 320
Query: 1241 IGY-IGSDNVLSSDRVSSQKEE-VLQETG--LKSSLKTSQSKGGNRSVSWADERSNGTLE 1074
+ I ++ S +V+ + E+ V + G LKSSLKTS+SK RSV WADER N E
Sbjct: 321 LDSGIHMESTTGSQKVAYEFEKKVSMDKGSVLKSSLKTSRSKNAGRSVKWADERENMAQE 380
Query: 1073 DK--EVRPKVKEEE---DPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVI 909
++ +++ K EE + D GIVI
Sbjct: 381 ERKDDLKSSTKPEESQVEDDSSLRFASAEACAAALTQAAEAVASGIAEAGDAASEAGIVI 440
Query: 908 LPQPQYGEGGKSEADDKALEFDQEVLKWPKKTVLLDSDMFDVEDSWHDTPPEGFSLTLSS 729
LPQP+ + G E D+ EFD+ +KWPKKTVLLD+DMFDVEDSWHDTPPEGF L LSS
Sbjct: 441 LPQPKRVDEGDVEEDEDTFEFDRGYVKWPKKTVLLDTDMFDVEDSWHDTPPEGFDLKLSS 500
Query: 728 FATMWMALFGWITCSSLAYIYGHDESSQEDFLLVNGREYPRKFFLKDGKSSEIRQALDGF 549
FATMWMALFGWITCSSLAYIYG D+SSQEDFL VNGREYP K LKDG SSEIR+ +DG
Sbjct: 501 FATMWMALFGWITCSSLAYIYGCDKSSQEDFLYVNGREYPHKIILKDGHSSEIRRTIDGC 560
Query: 548 ICRALPGLVMDLRLPTPVSTLEKFAGRLLDTMSFVDALPSFKMKQWQVIVLLFMEALSVH 369
ICRAL GLVM++ LP P+STLE+ G LLDTMSFVDALPSFK++QWQV+VLLF++ALSVH
Sbjct: 561 ICRALSGLVMEISLPVPLSTLERTVGCLLDTMSFVDALPSFKLEQWQVVVLLFLDALSVH 620
Query: 368 RLPSLAPQMTSRSMLLHKVLNAAQVSSEEYETMRDLIMPLGR 243
RLPSLA ++T+ +LLHKVLN A+VSS+EY++MRDL PLGR
Sbjct: 621 RLPSLASEVTNMDLLLHKVLNPAEVSSQEYDSMRDLFTPLGR 662
Score = 196 bits (498), Expect = 8e-47
Identities = 114/256 (44%), Positives = 160/256 (62%), Gaps = 4/256 (1%)
Frame = -1
Query: 2444 ANPPI--TIASAIHKIQLSLLETPSTPFELLIAASTLLSKPDYDDVITERTISDLCGYPL 2271
A PP T+A A+++IQ +LL + L+ A+ LLS+ DY+DV+ E +I+D+CGYPL
Sbjct: 2 AVPPTAATVADAVYQIQQALLNGAARSEHHLLVAAALLSRSDYEDVVVELSIADVCGYPL 61
Query: 2270 CPNPLPSPSDRRRKGKYRVSLSEHKVYDLQETYNYCREECLIGSRALRGSLSDERRADID 2091
C NPLPS DR+++G+YR+SL EHKVYDL+ETY YC E C++ SRA +LS ER +D+
Sbjct: 62 CRNPLPS--DRQKRGRYRISLREHKVYDLEETYKYCCEACVVSSRAFSATLSSERSSDVS 119
Query: 2090 VSRVKVEEVLRLFGYFXXXXXXXXXEKNSGRLVNLKLEIKEKEGGSAGDVKLDEWIGPSN 1911
S K+EE+L G F G L L I+E+ G+V LDEWIGPSN
Sbjct: 120 AS--KIEEIL---GLFRRQESSDGDLGMDGDLGISSLTIRERSDAEKGEVSLDEWIGPSN 174
Query: 1910 AIEGYVPQLNQG-SKFASNLESVQGIDGAKSREVDFK-AVTVGDKTDGVHSTESSALTSD 1737
AIEGYVP ++ N + + ++ A EV+F+ AV + ++ DG+ SS T D
Sbjct: 175 AIEGYVPNYDRNRGGVKQNQKPKKKVEDAAPGEVEFESAVILENEDDGL--AYSSRGTVD 232
Query: 1736 LSQMIAKKLEDVVITE 1689
S+ IAKKLE+V++ E
Sbjct: 233 ASEAIAKKLEEVLLEE 248
>ref|XP_006654013.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog, partial [Oryza brachyantha]
Length = 660
Score = 381 bits (978), Expect = e-102
Identities = 263/692 (38%), Positives = 358/692 (51%), Gaps = 28/692 (4%)
Frame = -1
Query: 2225 KYRVSLSEHKVYDLQETYNYCREECLIGSRALRGSLSDERRADIDVSRVKVEEVLRLFGY 2046
+Y +SL EH+VYDL+E +C E CL+ S A +L ER + R+ L
Sbjct: 1 RYHISLREHRVYDLEEARKFCSEPCLVASAAFGAALPPERPYGVPPDRLDA-----LVAL 55
Query: 2045 FXXXXXXXXXEKNSGRLVNL----KLEIKEKEGGSAGDVKLDEWIGPSNAIEGYVPQLNQ 1878
F SG + K+EI+E E G+V L EWIGPS+AIEGYVP+ ++
Sbjct: 56 FEGGGGSALGFGASGHGEEVDEGRKVEIRENEAPGPGEVTLHEWIGPSDAIEGYVPRHDR 115
Query: 1877 ---GSKFASNLESVQGIDGAKSREVDFKAVTVGDKTDGVHSTESSALTSDLSQMIAKKLE 1707
G + S + + VD + + G+ + S SS T S+++A K++
Sbjct: 116 IIGGPNKEAKQNSACSAEQFRHFNVDSRNASSGEYDTVIPS--SSVDTPVRSEVLADKMD 173
Query: 1706 DVVITEXXXXXXXXXXXXXXXXPTDATNNDIDKVDYSDVGFTSSVIFSNEFDAAPSETCI 1527
D+V+TE T A ++ K T +F + D +CI
Sbjct: 174 DMVLTEN----------------TKAKKKEVTK--------TPLKMFKQDEDNDMLSSCI 209
Query: 1526 VSTQDVSELIAKQLEDVVIAEXXXXXXXXXXXXXXXXXXXXXXKND------EMNFHSTI 1365
S+ IAKQLEDVV+ E K E++F STI
Sbjct: 210 ------SDSIAKQLEDVVLGEKKDKRTKKATKGTSKTGKSKSAKRPVGSDGHEVDFTSTI 263
Query: 1364 IMGDSVNIVAPKTSSVSSLDCAKQLTNKSDDVAHVRNKIESI-GYIGSDNVLSSDRVSSQ 1188
IMGD + SV + + + + + I+ + Y + + S+ V+
Sbjct: 264 IMGDH-DSGKMDHGSVGQYNFSSSILTNEQPSSSQYSAIDLVQAYTEELHEVFSNAVNIA 322
Query: 1187 KEEVLQETG---LKSSLKTSQSKGGNRSVSWADERSN----GTLEDKEVRPKVKEEEDPD 1029
K+E ++G +KSSLKT SK SV+WADE+ + + D + +E D
Sbjct: 323 KDETGDDSGRLAIKSSLKTVGSKNARHSVTWADEKGSVLEASRVFDSHSSDDKQSQEGMD 382
Query: 1028 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVILP----QPQYG---EGGKSE 870
GI+I+P Q QY + K
Sbjct: 383 SSIRRASAEACAAALIEAAEAISSGTSEVDDAVSKAGIIIVPDMVNQKQYNNDYDNDKDA 442
Query: 869 ADDKALEFDQEVLKWPKKTVLLDSDMFDVEDSWHDTPPEGFSLTLSSFATMWMALFGWIT 690
+++ E D+ V+KWPKKTVLLD+DMFDV+DSWHDTPPEGFSLTLS+FATMW ALFGWI+
Sbjct: 443 GENEIFEIDRGVVKWPKKTVLLDTDMFDVDDSWHDTPPEGFSLTLSTFATMWAALFGWIS 502
Query: 689 CSSLAYIYGHDESSQEDFLLVNGREYPRKFFLKDGKSSEIRQALDGFICRALPGLVMDLR 510
SSLAY+YG DESS ED L+ +GRE PRK L DG SSEIR+ALD +C ALP LV + R
Sbjct: 503 RSSLAYVYGLDESSMEDLLVASGRECPRKMVLNDGHSSEIRRALDTCVCNALPVLVSNWR 562
Query: 509 LPTPVSTLEKFAGRLLDTMSFVDALPSFKMKQWQVIVLLFMEALSVHRLPSLAPQMTSRS 330
+ PVS LE G L+DTMSFVDALPS + +QWQV+VL+ ++ALS+H+LP LA Q S S
Sbjct: 563 MQIPVSKLEITLGYLIDTMSFVDALPSLRSRQWQVMVLVLLDALSIHQLPGLA-QTMSDS 621
Query: 329 MLLHKVLNAAQVSSEEYETMRDLIMPLGRLPQ 234
LLHK+LN+AQVS EEY++M DLI+P GR Q
Sbjct: 622 RLLHKLLNSAQVSREEYDSMIDLILPFGRSTQ 653
>emb|CAN62034.1| hypothetical protein VITISV_014731 [Vitis vinifera]
Length = 659
Score = 323 bits (827), Expect = 5e-85
Identities = 184/349 (52%), Positives = 222/349 (63%), Gaps = 13/349 (3%)
Frame = -1
Query: 1223 DNVLSSDRVSSQKEEVLQETGLKSSLKTSQSKGGNRSVSWADER--SNGTLEDKEVRPKV 1050
+ V + ++ L T KSSLK S K RSV+WADE+ S + + +VR
Sbjct: 310 NGVKGKEEYHTENAAQLGPTKPKSSLKPSGGKKVIRSVTWADEKMDSADSRDFCKVRELE 369
Query: 1049 KEEEDP-----------DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVILP 903
++EDP D GI+ILP
Sbjct: 370 VKKEDPNGLGDIDVGDDDNALRFASAEACAVALSQAAEAVASGETDMTDAVSEAGIIILP 429
Query: 902 QPQYGEGGKSEADDKALEFDQEVLKWPKKTVLLDSDMFDVEDSWHDTPPEGFSLTLSSFA 723
P+ + G+S D LE + LKWP K + SD+FD +DSW+DTPPEGFSLTLS FA
Sbjct: 430 HPRDMDEGESLKDADLLEPEPVPLKWPIKPGISHSDIFDSDDSWYDTPPEGFSLTLSPFA 489
Query: 722 TMWMALFGWITCSSLAYIYGHDESSQEDFLLVNGREYPRKFFLKDGKSSEIRQALDGFIC 543
TMWMALF WIT SS+AYIYG DES E++L VNGREYP+K L DG+SSEI+Q L G +
Sbjct: 490 TMWMALFAWITSSSIAYIYGRDESFHEEYLSVNGREYPKKIVLTDGRSSEIKQTLAGCLS 549
Query: 542 RALPGLVMDLRLPTPVSTLEKFAGRLLDTMSFVDALPSFKMKQWQVIVLLFMEALSVHRL 363
RALPGLV DLRLP PVS LE+ GRLLDTMSFVDALPSF+MKQWQVIVLLF++ALSV R+
Sbjct: 550 RALPGLVADLRLPIPVSNLEQGVGRLLDTMSFVDALPSFRMKQWQVIVLLFIDALSVCRI 609
Query: 362 PSLAPQMTSRSMLLHKVLNAAQVSSEEYETMRDLIMPLGRLPQFSMQRG 216
P+L P MTSR ML KV +AAQVS+EEYE M+DLI+PLGR+PQFS Q G
Sbjct: 610 PALTPHMTSRRMLFPKVFDAAQVSAEEYEVMKDLIIPLGRVPQFSAQSG 658
Score = 174 bits (441), Expect = 3e-40
Identities = 118/314 (37%), Positives = 165/314 (52%), Gaps = 2/314 (0%)
Frame = -1
Query: 2435 PITIASAIHKIQLSLLETPSTPFELLIAASTLLSKPDYDDVITERTISDLCGYPLCPNPL 2256
PI + A+HK+QL LLE +L AA +L+S+ DY+DV+TERTI++LCGYPLC N L
Sbjct: 6 PIAVKDAVHKLQLFLLEGIQNENQLF-AAGSLMSRSDYEDVVTERTIANLCGYPLCSNSL 64
Query: 2255 PSPSDRRRKGKYRVSLSEHKVYDLQETYNYCREECLIGSRALRGSLSDERRADIDVSRVK 2076
PS +R RKG YR+SL EHKVYDL ETY YC C++ SR+ GSL +ER + ++ R
Sbjct: 65 PS--ERLRKGHYRISLKEHKVYDLHETYMYCSSGCVVNSRSFAGSLQEERCSVLNSER-- 120
Query: 2075 VEEVLRLFGYFXXXXXXXXXEKNSGRLVNLKLEIKEKEGGSAGDVKLDEWIGPSNAIEGY 1896
+ +LRLFG G L +L+I+E AG+V +++WIGPSNAIEGY
Sbjct: 121 INGILRLFG--ESSLESNKILGKHGDLGLSELKIRENVEKKAGEVSMEDWIGPSNAIEGY 178
Query: 1895 VPQLNQGSKFASNLESVQGIDGAKSREVDFKAVTVGDKTDGVHS--TESSALTSDLSQMI 1722
VPQ ++ K N+++ + + + ++D V D+ D V + T+ S S+ +
Sbjct: 179 VPQRDRNLK-PKNIKNHKEGSKSSNSKMDSGKNFVIDEMDFVSTIITKDEYSISKSSKGL 237
Query: 1721 AKKLEDVVITEXXXXXXXXXXXXXXXXPTDATNNDIDKVDYSDVGFTSSVIFSNEFDAAP 1542
E ND + G S VIF +EF A
Sbjct: 238 KDTTSHAKSKEPKEKASIGDQLSMLEKSAPPIQNDSESKLRESKGRRSRVIFKDEFSTA- 296
Query: 1541 SETCIVSTQDVSEL 1500
E V +Q SEL
Sbjct: 297 -EVPSVPSQSGSEL 309
>ref|XP_002280625.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog [Vitis vinifera]
gi|731415977|ref|XP_010659731.1| PREDICTED: putative RNA
polymerase II subunit B1 CTD phosphatase RPAP2 homolog
[Vitis vinifera] gi|731415979|ref|XP_010659732.1|
PREDICTED: putative RNA polymerase II subunit B1 CTD
phosphatase RPAP2 homolog [Vitis vinifera]
gi|296089830|emb|CBI39649.3| unnamed protein product
[Vitis vinifera]
Length = 659
Score = 320 bits (820), Expect = 3e-84
Identities = 180/349 (51%), Positives = 220/349 (63%), Gaps = 13/349 (3%)
Frame = -1
Query: 1223 DNVLSSDRVSSQKEEVLQETGLKSSLKTSQSKGGNRSVSWADER--SNGTLEDKEVRPKV 1050
+ V + ++ L T LKS LK S K RSV+WADE+ S + + +VR
Sbjct: 310 NGVKGKEEYHTENAAQLGPTKLKSCLKPSGGKKVTRSVTWADEKMDSADSRDFCKVRELE 369
Query: 1049 KEEEDP-----------DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVILP 903
++EDP D I+ILP
Sbjct: 370 VKKEDPNGLGDIDVGDDDNALRFASAEACAIALSQAAEAVASGETDMTDAVSEARIIILP 429
Query: 902 QPQYGEGGKSEADDKALEFDQEVLKWPKKTVLLDSDMFDVEDSWHDTPPEGFSLTLSSFA 723
P+ + G+S D LE + LKWP K + SD+FD +DSW+DTPPEGFSLTLS FA
Sbjct: 430 HPRDMDEGESLKDADLLEPEPVPLKWPIKPGISHSDIFDSDDSWYDTPPEGFSLTLSPFA 489
Query: 722 TMWMALFGWITCSSLAYIYGHDESSQEDFLLVNGREYPRKFFLKDGKSSEIRQALDGFIC 543
TMWMALF WIT SS+AYIYG DES E++L VNGREYP+K L DG+SSEI+Q L G +
Sbjct: 490 TMWMALFAWITSSSIAYIYGRDESFHEEYLSVNGREYPKKIVLTDGRSSEIKQTLAGCLA 549
Query: 542 RALPGLVMDLRLPTPVSTLEKFAGRLLDTMSFVDALPSFKMKQWQVIVLLFMEALSVHRL 363
RALPGLV DLRLP PVS LE+ GRLLDTMSFVDALPSF+MKQWQVIVLLF++ALSV ++
Sbjct: 550 RALPGLVADLRLPIPVSNLEQGVGRLLDTMSFVDALPSFRMKQWQVIVLLFIDALSVCQI 609
Query: 362 PSLAPQMTSRSMLLHKVLNAAQVSSEEYETMRDLIMPLGRLPQFSMQRG 216
P+L P M S+ ML KV +AAQVS+EEYE M+DLI+PLGR+PQFS Q G
Sbjct: 610 PALTPHMISKRMLFPKVFDAAQVSAEEYEVMKDLIIPLGRVPQFSAQSG 658
Score = 176 bits (446), Expect = 8e-41
Identities = 119/314 (37%), Positives = 165/314 (52%), Gaps = 2/314 (0%)
Frame = -1
Query: 2435 PITIASAIHKIQLSLLETPSTPFELLIAASTLLSKPDYDDVITERTISDLCGYPLCPNPL 2256
PI + A+HK+QL LLE +L AA +L+S+ DY+DV+TERTI++LCGYPLC N L
Sbjct: 6 PIAVKDAVHKLQLFLLEGIQNENQLF-AAGSLMSRSDYEDVVTERTIANLCGYPLCSNSL 64
Query: 2255 PSPSDRRRKGKYRVSLSEHKVYDLQETYNYCREECLIGSRALRGSLSDERRADIDVSRVK 2076
PS +R RKG YR+SL EHKVYDL ETY YC C++ SR+ GSL +ER + ++ R
Sbjct: 65 PS--ERLRKGHYRISLKEHKVYDLHETYMYCSSGCVVNSRSFAGSLQEERCSVLNSER-- 120
Query: 2075 VEEVLRLFGYFXXXXXXXXXEKNSGRLVNLKLEIKEKEGGSAGDVKLDEWIGPSNAIEGY 1896
+ +LRLFG G L +L+I+E AG+V +++WIGPSNAIEGY
Sbjct: 121 INGILRLFG--ESSLESNKILGKHGDLGLSELKIRENVEKKAGEVSMEDWIGPSNAIEGY 178
Query: 1895 VPQLNQGSKFASNLESVQGIDGAKSREVDFKAVTVGDKTDGVHS--TESSALTSDLSQMI 1722
VPQ ++ K N+++ + + + ++D V D+ D V + TE S S+ +
Sbjct: 179 VPQRDRNLK-PKNIKNRKEGSKSSNSKMDSGKNFVIDEMDFVRTIITEDEYSISKSSKGL 237
Query: 1721 AKKLEDVVITEXXXXXXXXXXXXXXXXPTDATNNDIDKVDYSDVGFTSSVIFSNEFDAAP 1542
E ND + G S VIF +EF A
Sbjct: 238 KDTTSHAKSKEPKEKASIGDQLSMLEKSAPPIQNDSESKLRESKGRRSRVIFKDEFSTA- 296
Query: 1541 SETCIVSTQDVSEL 1500
E V +Q SEL
Sbjct: 297 -EVPSVPSQSGSEL 309
>ref|XP_002521936.1| conserved hypothetical protein [Ricinus communis]
gi|223538861|gb|EEF40460.1| conserved hypothetical
protein [Ricinus communis]
Length = 645
Score = 310 bits (793), Expect = 5e-81
Identities = 170/348 (48%), Positives = 214/348 (61%), Gaps = 22/348 (6%)
Frame = -1
Query: 1211 SSDRVSSQKEEVLQETG--------LKSSLKTSQSKGGNRSVSWADERSNG--------- 1083
SS +++ E++ Q TG LK SLK+S +K NRSV+WADER +
Sbjct: 294 SSSYYTAEAEDISQATGAANLNESVLKPSLKSSGAKRSNRSVTWADERVDNAGSRNLCEV 353
Query: 1082 -----TLEDKEVRPKVKEEEDPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 918
T E E+ + +D
Sbjct: 354 QEMEQTNESHEISESANKGDDGHMLRFESAEACAVALSQAAEAVASGDADVNKAMSEAGI 413
Query: 917 IVILPQPQYGEGGKSEADDKALEFDQEVLKWPKKTVLLDSDMFDVEDSWHDTPPEGFSLT 738
IV+ P G+GG E +D +E + LKWP K + SD+FD EDSW+D PPEGFSLT
Sbjct: 414 IVLPPSQDLGQGGNVEKNDM-IEQESASLKWPTKPGIPQSDLFDPEDSWYDAPPEGFSLT 472
Query: 737 LSSFATMWMALFGWITCSSLAYIYGHDESSQEDFLLVNGREYPRKFFLKDGKSSEIRQAL 558
LS FATMWMALF W+T SSLAYIYG DES+ ED+L VNGREYPRK L+DG+SSEIR
Sbjct: 473 LSPFATMWMALFAWVTSSSLAYIYGRDESAHEDYLSVNGREYPRKIVLRDGRSSEIRLTA 532
Query: 557 DGFICRALPGLVMDLRLPTPVSTLEKFAGRLLDTMSFVDALPSFKMKQWQVIVLLFMEAL 378
+ + R PGLV +LRLP PVSTLE+ AGRLL+TMSFVDALP+F+ KQWQVI LLF+EAL
Sbjct: 533 ESCLARTFPGLVANLRLPIPVSTLEQGAGRLLETMSFVDALPAFRTKQWQVIALLFIEAL 592
Query: 377 SVHRLPSLAPQMTSRSMLLHKVLNAAQVSSEEYETMRDLIMPLGRLPQ 234
SV R+P+L MTSR M+LH+VL+ A +S+EEY+ M+D ++PLGR PQ
Sbjct: 593 SVCRIPALTSYMTSRRMVLHQVLDGAHISAEEYDIMKDFMVPLGRDPQ 640
Score = 165 bits (417), Expect = 2e-37
Identities = 91/182 (50%), Positives = 120/182 (65%)
Frame = -1
Query: 2432 ITIASAIHKIQLSLLETPSTPFELLIAASTLLSKPDYDDVITERTISDLCGYPLCPNPLP 2253
+++ ++K+QLSLLE +LL AA +L+S+ DY+DV+ ER+IS+LCGYPLC N LP
Sbjct: 7 VSVKDTVYKLQLSLLEGIENEDQLL-AAGSLMSRSDYEDVVVERSISNLCGYPLCNNSLP 65
Query: 2252 SPSDRRRKGKYRVSLSEHKVYDLQETYNYCREECLIGSRALRGSLSDERRADIDVSRVKV 2073
S DR KG+YR+SL EH+VYDLQETY YC CL+ SRA SL E+R + ++ +K+
Sbjct: 66 S--DRPYKGRYRISLKEHRVYDLQETYMYCSSSCLVNSRAFSESL-QEKRCSV-LNPIKL 121
Query: 2072 EEVLRLFGYFXXXXXXXXXEKNSGRLVNLKLEIKEKEGGSAGDVKLDEWIGPSNAIEGYV 1893
E+LR F SG L L+I+EK + G V L+EWIGPSNAIEGYV
Sbjct: 122 NEILRKFN---DLTLDSEGLGRSGDLGLSNLKIQEKSETNVGKVSLEEWIGPSNAIEGYV 178
Query: 1892 PQ 1887
PQ
Sbjct: 179 PQ 180
>ref|XP_011087531.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog isoform X3 [Sesamum indicum]
gi|747080559|ref|XP_011087533.1| PREDICTED: putative RNA
polymerase II subunit B1 CTD phosphatase RPAP2 homolog
isoform X3 [Sesamum indicum]
Length = 655
Score = 308 bits (789), Expect = 1e-80
Identities = 191/437 (43%), Positives = 249/437 (56%), Gaps = 44/437 (10%)
Frame = -1
Query: 1394 NDEMNFHSTIIMGD------SVNIVAPKTSS--VSSLDCAKQ-----------------L 1290
+ ++NF STII D SV +V K S VS D Q
Sbjct: 218 SSDLNFTSTIITQDEYSISKSVPLVKDKESKGKVSINDVNSQGNQMEKPDAPLPNVQETK 277
Query: 1289 TNKSDDVAHVRNKIESIGYIG-----SDNVLSSDRVSSQ--KEEVLQETGLKSSLKTSQS 1131
+ KSD HV + + + S N L+ + + KE T LKSSLKTS S
Sbjct: 278 SKKSDKHKHVTKTDDKLSILEAAAGPSQNDLTKEENGHRLGKECASGATILKSSLKTSDS 337
Query: 1130 KGGNRSVSWADERSNGT----LEDKEVRP--------KVKEEEDPDXXXXXXXXXXXXXX 987
K RSV+WAD +++G E +EV+ ++E D
Sbjct: 338 KKATRSVTWADAKTDGDGQNLCEFREVKDGKGALVTSHSADQEVGDESYRIASAEACARA 397
Query: 986 XXXXXXXXXXXXXXXXXXXXXXGIVILPQPQYGEGGKSEADDKALEFDQEVLKWPKKTVL 807
G++ILP P + K E + D +LKWP K
Sbjct: 398 LSQAAEAVATGQHDVSDAVSEAGVIILPPPHEVDEAKHEEIGDVTDTDPVLLKWPPKPGF 457
Query: 806 LDSDMFDVEDSWHDTPPEGFSLTLSSFATMWMALFGWITCSSLAYIYGHDESSQEDFLLV 627
++D+FD EDSW+D+PPEGFSLTLS F+TM+MALF WIT SSLAYIYG +ES E+++ V
Sbjct: 458 SNADLFDSEDSWYDSPPEGFSLTLSPFSTMFMALFAWITSSSLAYIYGKEESFHEEYISV 517
Query: 626 NGREYPRKFFLKDGKSSEIRQALDGFICRALPGLVMDLRLPTPVSTLEKFAGRLLDTMSF 447
NGREYP K + DG+SSEI+Q L G + RALPGLV +LRLP P+ST+E+ GRLLDTMSF
Sbjct: 518 NGREYPHKVVMPDGRSSEIKQTLAGCLARALPGLVAELRLPIPMSTIEQGMGRLLDTMSF 577
Query: 446 VDALPSFKMKQWQVIVLLFMEALSVHRLPSLAPQMTSRSMLLHKVLNAAQVSSEEYETMR 267
+D LP+F+MKQWQVIVLLF++ALSV R+P+L P + R +LL KVL AQ+S+EE+E M+
Sbjct: 578 IDPLPAFRMKQWQVIVLLFLDALSVSRIPALTPYLMGRRILLPKVLEGAQISAEEFEIMK 637
Query: 266 DLIMPLGRLPQFSMQRG 216
DLI+PLGR+PQFS Q G
Sbjct: 638 DLIIPLGRVPQFSTQSG 654
Score = 173 bits (439), Expect = 5e-40
Identities = 100/210 (47%), Positives = 136/210 (64%), Gaps = 2/210 (0%)
Frame = -1
Query: 2432 ITIASAIHKIQLSLLETPSTPFELLIAASTLLSKPDYDDVITERTISDLCGYPLCPNPLP 2253
+T+ A+HK+QLSLLE + +L AA +L+ + DY DV+TERTI ++CGYPLC N LP
Sbjct: 7 LTVKDAVHKLQLSLLEGINNENQLS-AAGSLICRSDYQDVVTERTIINMCGYPLCSNSLP 65
Query: 2252 SPSDRRRKGKYRVSLSEHKVYDLQETYNYCREECLIGSRALRGSLSDERRADIDVSRVKV 2073
S +R RKG+YR+SL EHKVYDLQETY YC CLI SRA SL +ER + ++ + +
Sbjct: 66 S--ERPRKGRYRISLKEHKVYDLQETYLYCSSSCLINSRAFAASLQEERSSSLNPA--TL 121
Query: 2072 EEVLRLFGYFXXXXXXXXXEKNSGRLVNLKLEIKEKEGGSAGDVKLDEWIGPSNAIEGYV 1893
EVL+L F + +G L +L+I+EK AG+V L+EWIGPSNAI+GYV
Sbjct: 122 NEVLKL---FDGLSLDSAVDMGNGDLGLSELKIEEKTDTEAGEVSLEEWIGPSNAIDGYV 178
Query: 1892 P--QLNQGSKFASNLESVQGIDGAKSREVD 1809
P + N K +SNL+ GA+ +V+
Sbjct: 179 PRNERNLKPKQSSNLKK-----GARQEQVE 203