BLASTX nr result

ID: Anemarrhena21_contig00013186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00013186
         (732 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]    108   4e-21
gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officin...   106   1e-20

>gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 926

 Score =  108 bits (269), Expect = 4e-21
 Identities = 72/220 (32%), Positives = 117/220 (53%), Gaps = 7/220 (3%)
 Frame = -2

Query: 641 GVYQGTRSR--AAIPYNYDQASTTQGVESSSVPTSIYQWSDEERQEFDGYASSRTNSSVQ 468
           GVY+ TRSR  A  P NY + +  QG+ +S               E    A S+++SS+ 
Sbjct: 376 GVYRHTRSRTGAIRPVNYQKLA--QGITTSD--------------EHSAIAESQSSSSIG 419

Query: 467 TRALPVNMTNTDDDLRRKVEAQEVMLREQKETMSDLQEMMAQLLKQQ*IGSVAQPIHPPK 288
            + + V MT   +D+ ++V+   VML+ Q+ET+  +++M+AQLL ++  G   +      
Sbjct: 420 AQKVSVYMTGNPEDIAKRVDEHHVMLQAQQETLLQVKDMLAQLLAEK--GQRPESSRRTT 477

Query: 287 PTGLSQ-----NRNDENQEARSHHEKEFEEVA*KISVPGSSNMIDASVTKTMQDQIASLK 123
             G  +     +R   N ++ S +EKE E    K   P S+ + +      ++ ++ ++ 
Sbjct: 478 SKGKQKVHEHSDRETHNLDSSSDNEKEME----KELYPQSTKVDE------LEARLNAMA 527

Query: 122 QRDELQKVGVVRPYPVEWDSVPYPYKFSPPSLHAFDGTGS 3
            R EL++ GV+RPYP EWD+ PYP KF  P+L  FDGTGS
Sbjct: 528 NRSELREEGVIRPYPAEWDTAPYPPKFKAPTLQPFDGTGS 567


>gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officinalis]
          Length = 869

 Score =  106 bits (265), Expect = 1e-20
 Identities = 71/222 (31%), Positives = 113/222 (50%), Gaps = 9/222 (4%)
 Frame = -2

Query: 641  GVYQGTRSR--AAIPYNYDQASTTQGVESSSVPTSIYQWSDEERQEFDGYASSRTNSSVQ 468
            GVYQ TR+R  A  P NY + +         + TS          E    A S+++SSV 
Sbjct: 434  GVYQNTRTRTGAIRPVNYQKLA-------KRITTS---------DEHSAIAESQSSSSVG 477

Query: 467  TRALPVNMTNTDDDLRRKVEAQEVMLREQKETMSDLQEMMAQLLKQQ*IGSVAQPIHPPK 288
             R +    T   +D+ ++V+   VML+ Q+ET+  L++M+AQLL ++      +P    +
Sbjct: 478  AREVSAYTTGNHEDITKRVDEHHVMLQAQQETLLQLKDMLAQLLAEK----GQKPESSRR 533

Query: 287  PTGLSQNRNDENQEARSHH-------EKEFEEVA*KISVPGSSNMIDASVTKTMQDQIAS 129
             T   + +  E+ +  +HH       E+E E+      +   S  +D      ++ ++ +
Sbjct: 534  TTSKGKQKATEHSDRETHHLGSSSEGEREMEK-----ELHPQSTKVDE-----LKARLNA 583

Query: 128  LKQRDELQKVGVVRPYPVEWDSVPYPYKFSPPSLHAFDGTGS 3
            +  R EL++ GVVRPYP EWD+ PYP KF  P+L  FDGTGS
Sbjct: 584  IANRSELREEGVVRPYPAEWDTAPYPPKFKAPTLQPFDGTGS 625


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