BLASTX nr result
ID: Anemarrhena21_contig00013184
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00013184
(3637 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group... 243 e-166
emb|CAE03978.3| OSJNBa0033H08.2 [Oryza sativa Japonica Group] 294 e-146
emb|CAH66177.1| OSIGBa0130O15.1 [Oryza sativa Indica Group] gi|1... 294 e-146
gb|AAP53887.2| retrotransposon protein, putative, Ty1-copia subc... 295 e-145
ref|NP_001064658.2| Os10g0429700, partial [Oryza sativa Japonica... 295 e-145
emb|CAD41367.2| OSJNBa0088A01.6 [Oryza sativa Japonica Group] 285 e-145
ref|NP_001068460.1| Os11g0682500, partial [Oryza sativa Japonica... 295 e-144
gb|ABA95283.1| retrotransposon protein, putative, unclassified, ... 295 e-144
emb|CAE03128.3| OJ000114_01.9 [Oryza sativa Japonica Group] 291 e-144
gb|AAN05503.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 291 e-144
gb|AAG60200.1|AC084763_20 putative gag-pol polyprotein [Oryza sa... 291 e-143
ref|XP_010239308.1| PREDICTED: retrovirus-related Pol polyprotei... 310 e-143
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi... 276 e-142
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g... 276 e-142
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]... 263 e-142
gb|ADB85424.1| putative retrotransposon protein [Phyllostachys e... 271 e-141
gb|ABA96719.2| retrotransposon protein, putative, unclassified [... 286 e-141
ref|NP_001064098.1| Os10g0130700 [Oryza sativa Japonica Group] g... 282 e-141
emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group] 283 e-141
emb|CCI55340.1| PH01B019A14.9 [Phyllostachys edulis] 276 e-140
>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711922|gb|ABF99717.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1335
Score = 243 bits (621), Expect(7) = e-166
Identities = 120/263 (45%), Positives = 165/263 (62%), Gaps = 1/263 (0%)
Frame = +1
Query: 1294 DGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLLVDDHSRYMWV 1473
+GC+ GK A F HS +RA PL LVH ++ G + + N YF+ +DD++R +WV
Sbjct: 493 EGCVFGKQIRASFPHSGAWRASAPLELVHADIVGKVPTISEGGNWYFITFIDDYTRMIWV 552
Query: 1474 VMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEELGIKRYLTAS 1653
LK KS F KFKA VE ++ K+K RSD+G E+ISKEF YCE GI+R LTA
Sbjct: 553 YFLKEKSAALEIFKKFKAMVENQSNRKIKVLRSDQGREYISKEFEKYCENAGIRRQLTAG 612
Query: 1654 YSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPTQSLEGMTPYQ 1833
YS QQNGV ER+N+T+ MA S+L+ K +P +W EAV TAVY+LNR+PT+++ TP++
Sbjct: 613 YSAQQNGVAERKNRTINDMANSMLQDKGMPKSFWAEAVNTAVYILNRSPTKAVTNRTPFE 672
Query: 1834 AWMGRKPNVQHLRVL-VAWHMSK**THTLKKSNRSVPMVLFGYEPGSKAYRVYDSNQKKL 2010
AW G+KP + H+RV + +K N+S + GY G K YR+Y+ +KK+
Sbjct: 673 AWYGKKPVIGHMRVFGCICYAQVPAQKRVKFDNKSDRCIFVGYADGIKGYRLYNLEKKKI 732
Query: 2011 HMSRDIIFDEDREWN*ESSTAQS 2079
+SRD IFDE WN +S A S
Sbjct: 733 IISRDAIFDESATWNWKSPEASS 755
Score = 174 bits (442), Expect(7) = e-166
Identities = 89/188 (47%), Positives = 119/188 (63%), Gaps = 1/188 (0%)
Frame = +2
Query: 2492 DLPKGHRTISLKWVYKVKKNPKGDVIKHKARLVAKGYVQKQGVDFNEVFVPVARLETVRM 2671
D P+ I +KWVYK K NP G V K+KARLVAKG+ QK G+D+ E + PVARLET+R
Sbjct: 879 DRPRDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRT 938
Query: 2672 LIALAVQEDGEVHHMDVKSTFLNGELEEEVYVAQPKGF-VEGHEEKVLRLKKALYGLRQV 2848
+IALA Q+ +++ +DVKS FLNG L+EE+YV QP+GF V+G E KV RLKKALYGL+Q
Sbjct: 939 IIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQA 998
Query: 2849 PHAWNSKLDKCLQSLGFERCPLKHAVYKKRXXXXXXXXXXXXXXXXITGSNVKDIVQFKE 3028
P AW S++DK GF + + +Y + TG++ K + FK+
Sbjct: 999 PRAWYSQIDKYFIQKGFAKSISEPTLYVNKTGTDILIVSLYVDDLIYTGNSEKMMQDFKK 1058
Query: 3029 QMKRLFEM 3052
M +EM
Sbjct: 1059 DMMHTYEM 1066
Score = 113 bits (283), Expect(7) = e-166
Identities = 100/408 (24%), Positives = 180/408 (44%), Gaps = 13/408 (3%)
Frame = +3
Query: 108 ESVDEFAVQLNTVVSKMRAMGEKMDDTAVV-KVLQAVTPKFLQIASILEQFGDLRKMTAE 284
E V ++ ++ +V++MR GE ++D VV K+L ++ K+ I + E+ DL K +
Sbjct: 125 EKVKDYFSRVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAATEESKDLSKDS-- 182
Query: 285 EVFGRLKAHEQLRGFGDTEG-EHMLLI*GEWEXXXXXXXXXXHDSGWKERDEGSDCXXXX 461
L++HE+ + + E+ + +G+ RD G
Sbjct: 183 -----LESHEERKLQREGSSIENAFQSKLSFRPQNSRFRGNFQKNGFPMRDRG---YFQK 234
Query: 462 XXXXXXXXXXXXXDERYNDSG--------KKYHKFDKA--KIRCYNCQNYGHFASECRKP 611
E+ S K H D K+ C C+ GH A CR
Sbjct: 235 NGFSRQKEDGQERREKGTSSSNLWCDICQKSSHTTDMCWKKMTCNKCKRKGHIAKYCR-T 293
Query: 612 KKEERAHFAEKQHDDEPTLLLTEGCESLYTAQGEREKMMFYEEKVKPRRSSEEVVFETDI 791
++ RA+F++++ E + S +TAQ E++ D+
Sbjct: 294 REINRANFSQEKEKSEEMVF------SCHTAQEEKD----------------------DV 325
Query: 792 WYLDTGASNHMTGCRKKFSDLNEKVCGRVKFSDGSVVEIKRRGTVMLQYQNGEHRLLTNV 971
W +D+G +NHM F +++ ++ +GS+ + + +GTV +Q +G + + +V
Sbjct: 326 WVIDSGCTNHMAADPNLFREMDSSYHAKIHMGNGSIAQSEGKGTVAVQTADGP-KFIKDV 384
Query: 972 YYIPKLCSSIMSLGQLDESGCNIVMERGHLHIYDR-SGKLLANVRKSENRLYILNLKVAH 1148
+P L +++S+GQL E G + E I DR + +L+A + +NR ++L +
Sbjct: 385 LLVPDLKQNLLSIGQLLEHGYAVYFEDFSCKILDRKNNRLVAKINMEKNRNFLLRMNHTT 444
Query: 1149 PVCLMGSLGDNAWRWHARYGHLNFPALRKLVQKEMVIGMPVVEHVTDP 1292
+ L + D + WH R GHLN+ AL+ L K MV G+P + +DP
Sbjct: 445 QMALRSEV-DISDLWHKRMGHLNYRALKLLRTKGMVQGLPFITLKSDP 491
Score = 72.0 bits (175), Expect(7) = e-166
Identities = 37/93 (39%), Positives = 52/93 (55%)
Frame = +1
Query: 3082 IEVRQEPNAITISQSGYAMKILEKLKLADCNHCQVPMELRMKLSETDANPPVDTFMYRSV 3261
+EV Q I ISQ YA IL+K K+ +C P+ K D D +YRS+
Sbjct: 1078 MEVHQSDEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKADPTIYRSL 1137
Query: 3262 VGSLRYLVNTRPDLAYSVGVVSRYMEAPTTLTW 3360
VGSL YL TRPD+ ++ ++SRYM +P+ L +
Sbjct: 1138 VGSLLYLTATRPDIMFAASLLSRYMSSPSQLNF 1170
Score = 50.4 bits (119), Expect(7) = e-166
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Frame = +3
Query: 2202 EATSRQPHQQEHQELTTTLLHNEGTPD----FSTSSEKPLRYHSLQEIYDETREVEG--E 2363
E P Q ++++ ++ +P ST P R S+ E+ + T + G +
Sbjct: 776 EVEDHTPSPQPSSPMSSSSASSDSSPSSEEQISTPESAPRRVRSMVELLESTSQQRGSEQ 835
Query: 2364 AALCFLSVEEPTTFEEANDSYCWKKAMAEEIAAIQRNHTCEL 2489
C SV EP +F+EA W KAM +EI I++N+T EL
Sbjct: 836 HEFCNYSVVEPQSFQEAEKHDNWIKAMEDEIHMIEKNNTWEL 877
Score = 48.1 bits (113), Expect(7) = e-166
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +3
Query: 3339 SSNYTHMAAVKQILWYV*GTINHGCVYPRRKESEAGLIGHSDSDLAEDVDDHKSTTGVIY 3518
S + + A K++L Y+ GT ++G Y KES+ LIG++DSD A +DD KST+G +
Sbjct: 1164 SPSQLNFTAAKRVLRYIKGTADYGIWYKPVKESK--LIGYTDSDWAGCLDDMKSTSGYAF 1221
Query: 3519 FLGES 3533
LG +
Sbjct: 1222 SLGSA 1226
Score = 22.7 bits (47), Expect(7) = e-166
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 3587 EYVAATAVACQGVWLGR 3637
EYVAA+ Q VWL R
Sbjct: 1229 EYVAASKAVSQVVWLRR 1245
>emb|CAE03978.3| OSJNBa0033H08.2 [Oryza sativa Japonica Group]
Length = 1479
Score = 294 bits (753), Expect(3) = e-146
Identities = 144/271 (53%), Positives = 189/271 (69%), Gaps = 1/271 (0%)
Frame = +1
Query: 1264 CLS*ST*QIHDGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLL 1443
CLS Q+ + C+ GKH +PF R+D PL L+HG+LCG ITPATP+ N+YF+LL
Sbjct: 578 CLS-QVDQVCEACLAGKHRRSPFPRQALCRSDVPLALLHGDLCGPITPATPSGNRYFLLL 636
Query: 1444 VDDHSRYMWVVMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEE 1623
VDD+SRYMWV +L +K A + +A+ E K+ KL+A R+DRGGEF S +F YC E
Sbjct: 637 VDDYSRYMWVALLSTKDAAPAAIKRTQAAAERKSGRKLRALRTDRGGEFTSTQFAEYCAE 696
Query: 1624 LGIKRYLTASYSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPT 1803
LG++R LTA YSPQQNGVVERRNQ+V+G ARS+LK+K +P ++WGEA+ TAVYLLNR+ +
Sbjct: 697 LGMRRELTAPYSPQQNGVVERRNQSVVGTARSMLKAKGLPGMFWGEAINTAVYLLNRSSS 756
Query: 1804 QSLEGMTPYQAWMGRKPNVQHLRVLVAWHMSK**THTLKK-SNRSVPMVLFGYEPGSKAY 1980
+ + G TPY W G P V HLR K T LKK +RS PM+ GYEPGSKAY
Sbjct: 757 KGIGGKTPYALWNGVPPAVHHLRTFGCVAHVKTTTPNLKKLDDRSRPMIFVGYEPGSKAY 816
Query: 1981 RVYDSNQKKLHMSRDIIFDEDREWN*ESSTA 2073
R YD +++H+SRDI+FDE +W+ ++ A
Sbjct: 817 RAYDPATRRVHISRDIVFDEAAQWDWDAEAA 847
Score = 241 bits (615), Expect(3) = e-146
Identities = 140/408 (34%), Positives = 216/408 (52%), Gaps = 16/408 (3%)
Frame = +3
Query: 108 ESVDEFAVQLNTVVSKMRAMGE-KMDDTAVVKVLQAVTPKFLQIASILEQFGDLRKMTAE 284
E+V++FA++L T+V+++ +G+ + D V K L+ P+F Q+ +E D+ ++ E
Sbjct: 189 ETVEDFALRLTTIVNQLATLGDPEPADKVVEKYLRVARPRFNQLILSIETLLDISTLSME 248
Query: 285 EVFGRLKAHEQL-RGFGDTEGEHMLLI*GEWEXXXXXXXXXXHDSGWKERDEGSDCXXXX 461
EV GRLKA E + T G + L EW D K D G
Sbjct: 249 EVTGRLKAAEDSGQSSSHTAGGKLYLTEEEW-----AERQKKKDQEAKRGDSGGSGGRGK 303
Query: 462 XXXXXXXXXXXXXDERYNDSGKKYHKFDKAKIRCYNCQNYGHFASECR-KPKKEERAHFA 638
+ + K DK C NC GH+A +CR K K+EE+AH A
Sbjct: 304 RRGGRGRTGGGGIASPESTNSGSARKGDK----CRNCGKLGHWAKDCRSKSKREEQAHVA 359
Query: 639 EKQHDDEPTLLLTEGCESLYTAQGEREKMMFYEEKVKPRRSSEEVV-------------F 779
++ ++ +LLT GC A + P ++ E+V
Sbjct: 360 QEDEEEHTLMLLTGGCVDTVDAAAPEG-----DTPTPPHQAVVELVEMKVFAALDDAADH 414
Query: 780 ETDIWYLDTGASNHMTGCRKKFSDLNEKVCGRVKFSDGSVVEIKRRGTVMLQYQNGEHRL 959
+ W +D+GASNHMTG R F+DL+ + G V+ DGSVV I RGT++ +NGEHR
Sbjct: 415 DPGRWIMDSGASNHMTGSRMAFADLDTNITGNVRLGDGSVVRIAGRGTILFACKNGEHRT 474
Query: 960 LTNVYYIPKLCSSIMSLGQLDESGCNIVMERGHLHIYDRSGKLLANVRKSENRLYILNLK 1139
L+N YY+P+L ++I+S+GQLDE+G ++ E G + ++D +LLA + ++ RLY+L++
Sbjct: 475 LSNTYYLPRLAANIISIGQLDETGFKVLAEDGIMRVWDEQRRLLARIPRTPGRLYMLDIN 534
Query: 1140 VAHPVCLMGSLGDNAWRWHARYGHLNFPALRKLVQKEMVIGMPVVEHV 1283
+A PVCL ++AWRWHAR GH+NF AL K+ ++E+V G+P + V
Sbjct: 535 LARPVCLAAHADEDAWRWHARLGHINFRALCKMGKEELVRGLPCLSQV 582
Score = 35.0 bits (79), Expect(3) = e-146
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +2
Query: 2 AKDGWAVLKSMYVGADRVTRAKLQTLKTEFEAL 100
A++ W +K+M VG DR+ +A Q ++ E+E+L
Sbjct: 151 AREAWECIKTMRVGNDRIRKASAQKVRAEYESL 183
Score = 219 bits (559), Expect(5) = e-107
Identities = 113/191 (59%), Positives = 135/191 (70%), Gaps = 1/191 (0%)
Frame = +2
Query: 2483 RTRDLPKGHRTISLKWVYKVKKNPKGDVIKHKARLVAKGYVQKQGVDFNEVFVPVARLET 2662
R DLP GHR I LKWVYK+KK+ +G V+KHKARLVAKGYVQ+ G+DF+EVF PVARL++
Sbjct: 993 RLVDLPSGHRPIGLKWVYKLKKDAQGVVVKHKARLVAKGYVQRAGIDFDEVFAPVARLDS 1052
Query: 2663 VRMLIALAVQEDGEVHHMDVKSTFLNGELEEEVYVAQPKGF-VEGHEEKVLRLKKALYGL 2839
VR+L+ALA QE VHHMDVKS FLNGEL EEVYV QP GF ++G E KV RL KALYGL
Sbjct: 1053 VRLLLALAAQEGWMVHHMDVKSAFLNGELIEEVYVVQPPGFEIDGQENKVYRLDKALYGL 1112
Query: 2840 RQVPHAWNSKLDKCLQSLGFERCPLKHAVYKKRXXXXXXXXXXXXXXXXITGSNVKDIVQ 3019
RQ P AWN+KLD L+ LGF++ PL+H +Y + I G + I
Sbjct: 1113 RQAPRAWNTKLDCTLKKLGFKQSPLEHGLYARGDGSGRLLVGVYVDDLVIVGGDSGMIKG 1172
Query: 3020 FKEQMKRLFEM 3052
FKEQMK F+M
Sbjct: 1173 FKEQMKAEFKM 1183
Score = 108 bits (270), Expect(5) = e-107
Identities = 55/89 (61%), Positives = 63/89 (70%)
Frame = +1
Query: 3082 IEVRQEPNAITISQSGYAMKILEKLKLADCNHCQVPMELRMKLSETDANPPVDTFMYRSV 3261
IEV QE IT+ Q+ YA +I+EK L CN C PME R+KLS+ A VD YRS+
Sbjct: 1195 IEVHQEAGIITLKQAAYASRIVEKAGLTGCNPCATPMEPRLKLSKESAGSLVDATEYRSL 1254
Query: 3262 VGSLRYLVNTRPDLAYSVGVVSRYMEAPT 3348
VGSL YLVNTRPDLAYSVG VSR+ME PT
Sbjct: 1255 VGSLHYLVNTRPDLAYSVGYVSRFMEKPT 1283
Score = 83.6 bits (205), Expect(5) = e-107
Identities = 42/79 (53%), Positives = 54/79 (68%)
Frame = +3
Query: 3354 HMAAVKQILWYV*GTINHGCVYPRRKESEAGLIGHSDSDLAEDVDDHKSTTGVIYFLGES 3533
H+AAVK+I+ YV GTI+ GC Y KE E GL G+SDSD+A D+D KSTTGVI+FLG++
Sbjct: 1286 HLAAVKRIIRYVAGTIHLGCRYV--KEGEGGLQGYSDSDMAGDIDTRKSTTGVIFFLGKN 1343
Query: 3534 PITWXXXXXXXXXXXXCES 3590
P++W CES
Sbjct: 1344 PVSWQSQKQRVVALSSCES 1362
Score = 41.6 bits (96), Expect(5) = e-107
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Frame = +3
Query: 2298 EKPLRYHSLQEIYDET-------REVEGEAALCFLSVEEPTTFEEANDSYCWKKAMAEEI 2456
+ PLR+ ++ + REV+ E L +S EEP TF +A W++AM +EI
Sbjct: 926 DAPLRFRTMDNVLGPAMLPGLANREVQEE--LMMVSGEEPATFAQAERDEDWRRAMLDEI 983
Query: 2457 AAIQRNHTCEL 2489
++I+ N T L
Sbjct: 984 SSIEENKTWRL 994
Score = 31.6 bits (70), Expect(5) = e-107
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 3587 EYVAATAVACQGVWLGR 3637
EY+AA ACQG+WL R
Sbjct: 1363 EYIAAATAACQGIWLAR 1379
>emb|CAH66177.1| OSIGBa0130O15.1 [Oryza sativa Indica Group]
gi|116309095|emb|CAH66202.1| OSIGBa0148D14.8 [Oryza
sativa Indica Group]
Length = 1439
Score = 294 bits (753), Expect(3) = e-146
Identities = 144/271 (53%), Positives = 189/271 (69%), Gaps = 1/271 (0%)
Frame = +1
Query: 1264 CLS*ST*QIHDGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLL 1443
CLS Q+ + C+ GKH +PF R+D PL L+HG+LCG ITPATP+ N+YF+LL
Sbjct: 538 CLS-QVDQVCEACLAGKHRRSPFPRQALCRSDVPLALLHGDLCGPITPATPSGNRYFLLL 596
Query: 1444 VDDHSRYMWVVMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEE 1623
VDD+SRYMWV +L +K A + +A+ E K+ KL+A R+DRGGEF S +F YC E
Sbjct: 597 VDDYSRYMWVALLSTKDAAPAAIKRTQAAAERKSGRKLRALRTDRGGEFTSTQFAEYCAE 656
Query: 1624 LGIKRYLTASYSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPT 1803
LG++R LTA YSPQQNGVVERRNQ+V+G ARS+LK+K +P ++WGEA+ TAVYLLNR+ +
Sbjct: 657 LGMRRELTAPYSPQQNGVVERRNQSVVGTARSMLKAKGLPGMFWGEAINTAVYLLNRSSS 716
Query: 1804 QSLEGMTPYQAWMGRKPNVQHLRVLVAWHMSK**THTLKK-SNRSVPMVLFGYEPGSKAY 1980
+ + G TPY W G P V HLR K T LKK +RS PM+ GYEPGSKAY
Sbjct: 717 KGIGGKTPYALWNGVPPAVHHLRTFGCVAHVKTTTPNLKKLDDRSRPMIFVGYEPGSKAY 776
Query: 1981 RVYDSNQKKLHMSRDIIFDEDREWN*ESSTA 2073
R YD +++H+SRDI+FDE +W+ ++ A
Sbjct: 777 RAYDPATRRVHISRDIVFDEAAQWDWDAEAA 807
Score = 241 bits (615), Expect(3) = e-146
Identities = 140/408 (34%), Positives = 216/408 (52%), Gaps = 16/408 (3%)
Frame = +3
Query: 108 ESVDEFAVQLNTVVSKMRAMGE-KMDDTAVVKVLQAVTPKFLQIASILEQFGDLRKMTAE 284
E+V++FA++L T+V+++ +G+ + D V K L+ P+F Q+ +E D+ ++ E
Sbjct: 149 ETVEDFALRLTTIVNQLATLGDPEPADKVVEKYLRVARPRFNQLILSIETLLDISTLSME 208
Query: 285 EVFGRLKAHEQL-RGFGDTEGEHMLLI*GEWEXXXXXXXXXXHDSGWKERDEGSDCXXXX 461
EV GRLKA E + T G + L EW D K D G
Sbjct: 209 EVTGRLKAAEDSGQSSSHTAGGKLYLTEEEW-----AERQKKKDQEAKRGDSGGSGGRGK 263
Query: 462 XXXXXXXXXXXXXDERYNDSGKKYHKFDKAKIRCYNCQNYGHFASECR-KPKKEERAHFA 638
+ + K DK C NC GH+A +CR K K+EE+AH A
Sbjct: 264 RRGGRGRTGGGGIASPESTNSGSARKGDK----CRNCGKLGHWAKDCRSKSKREEQAHVA 319
Query: 639 EKQHDDEPTLLLTEGCESLYTAQGEREKMMFYEEKVKPRRSSEEVV-------------F 779
++ ++ +LLT GC A + P ++ E+V
Sbjct: 320 QEDEEEHTLMLLTGGCVDTVDAAAPEG-----DTPTPPHQAVVELVEMKVFAALDDAADH 374
Query: 780 ETDIWYLDTGASNHMTGCRKKFSDLNEKVCGRVKFSDGSVVEIKRRGTVMLQYQNGEHRL 959
+ W +D+GASNHMTG R F+DL+ + G V+ DGSVV I RGT++ +NGEHR
Sbjct: 375 DPGRWIMDSGASNHMTGSRMAFADLDTNITGNVRLGDGSVVRIAGRGTILFACKNGEHRT 434
Query: 960 LTNVYYIPKLCSSIMSLGQLDESGCNIVMERGHLHIYDRSGKLLANVRKSENRLYILNLK 1139
L+N YY+P+L ++I+S+GQLDE+G ++ E G + ++D +LLA + ++ RLY+L++
Sbjct: 435 LSNTYYLPRLAANIISIGQLDETGFKVLAEDGIMRVWDEQRRLLARIPRTPGRLYMLDIN 494
Query: 1140 VAHPVCLMGSLGDNAWRWHARYGHLNFPALRKLVQKEMVIGMPVVEHV 1283
+A PVCL ++AWRWHAR GH+NF AL K+ ++E+V G+P + V
Sbjct: 495 LARPVCLAAHADEDAWRWHARLGHINFRALCKMGKEELVRGLPCLSQV 542
Score = 35.0 bits (79), Expect(3) = e-146
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +2
Query: 2 AKDGWAVLKSMYVGADRVTRAKLQTLKTEFEAL 100
A++ W +K+M VG DR+ +A Q ++ E+E+L
Sbjct: 111 AREAWECIKTMRVGNDRIRKASAQKVRAEYESL 143
Score = 219 bits (559), Expect(5) = e-107
Identities = 113/191 (59%), Positives = 135/191 (70%), Gaps = 1/191 (0%)
Frame = +2
Query: 2483 RTRDLPKGHRTISLKWVYKVKKNPKGDVIKHKARLVAKGYVQKQGVDFNEVFVPVARLET 2662
R DLP GHR I LKWVYK+KK+ +G V+KHKARLVAKGYVQ+ G+DF+EVF PVARL++
Sbjct: 953 RLVDLPSGHRPIGLKWVYKLKKDAQGVVVKHKARLVAKGYVQRAGIDFDEVFAPVARLDS 1012
Query: 2663 VRMLIALAVQEDGEVHHMDVKSTFLNGELEEEVYVAQPKGF-VEGHEEKVLRLKKALYGL 2839
VR+L+ALA QE VHHMDVKS FLNGEL EEVYV QP GF ++G E KV RL KALYGL
Sbjct: 1013 VRLLLALAAQEGWMVHHMDVKSAFLNGELIEEVYVVQPPGFEIDGQENKVYRLDKALYGL 1072
Query: 2840 RQVPHAWNSKLDKCLQSLGFERCPLKHAVYKKRXXXXXXXXXXXXXXXXITGSNVKDIVQ 3019
RQ P AWN+KLD L+ LGF++ PL+H +Y + I G + I
Sbjct: 1073 RQAPRAWNTKLDCTLKKLGFKQSPLEHGLYARGDGSGRLLVGVYVDDLVIVGGDSGMIKG 1132
Query: 3020 FKEQMKRLFEM 3052
FKEQMK F+M
Sbjct: 1133 FKEQMKAEFKM 1143
Score = 108 bits (270), Expect(5) = e-107
Identities = 55/89 (61%), Positives = 63/89 (70%)
Frame = +1
Query: 3082 IEVRQEPNAITISQSGYAMKILEKLKLADCNHCQVPMELRMKLSETDANPPVDTFMYRSV 3261
IEV QE IT+ Q+ YA +I+EK L CN C PME R+KLS+ A VD YRS+
Sbjct: 1155 IEVHQEAGIITLKQAAYASRIVEKAGLTGCNPCATPMEPRLKLSKESAGSLVDATEYRSL 1214
Query: 3262 VGSLRYLVNTRPDLAYSVGVVSRYMEAPT 3348
VGSL YLVNTRPDLAYSVG VSR+ME PT
Sbjct: 1215 VGSLHYLVNTRPDLAYSVGYVSRFMEKPT 1243
Score = 83.6 bits (205), Expect(5) = e-107
Identities = 42/79 (53%), Positives = 54/79 (68%)
Frame = +3
Query: 3354 HMAAVKQILWYV*GTINHGCVYPRRKESEAGLIGHSDSDLAEDVDDHKSTTGVIYFLGES 3533
H+AAVK+I+ YV GTI+ GC Y KE E GL G+SDSD+A D+D KSTTGVI+FLG++
Sbjct: 1246 HLAAVKRIIRYVAGTIHLGCRYV--KEGEGGLQGYSDSDMAGDIDTRKSTTGVIFFLGKN 1303
Query: 3534 PITWXXXXXXXXXXXXCES 3590
P++W CES
Sbjct: 1304 PVSWQSQKQRVVALSSCES 1322
Score = 41.6 bits (96), Expect(5) = e-107
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Frame = +3
Query: 2298 EKPLRYHSLQEIYDET-------REVEGEAALCFLSVEEPTTFEEANDSYCWKKAMAEEI 2456
+ PLR+ ++ + REV+ E L +S EEP TF +A W++AM +EI
Sbjct: 886 DAPLRFRTMDNVLGPAMLPGLANREVQEE--LMMVSGEEPATFAQAERDEDWRRAMLDEI 943
Query: 2457 AAIQRNHTCEL 2489
++I+ N T L
Sbjct: 944 SSIEENKTWRL 954
Score = 31.6 bits (70), Expect(5) = e-107
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 3587 EYVAATAVACQGVWLGR 3637
EY+AA ACQG+WL R
Sbjct: 1323 EYIAAATAACQGIWLAR 1339
>gb|AAP53887.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1805
Score = 295 bits (754), Expect(3) = e-145
Identities = 143/271 (52%), Positives = 190/271 (70%), Gaps = 1/271 (0%)
Frame = +1
Query: 1264 CLS*ST*QIHDGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLL 1443
CLS Q+ + C+ GKH +PF R+D+PL L+HG+LCG ITPATP+ N+YF+LL
Sbjct: 734 CLS-QVDQVCEACLAGKHRRSPFPRQALCRSDEPLALLHGDLCGPITPATPSGNRYFLLL 792
Query: 1444 VDDHSRYMWVVMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEE 1623
VDD+SRYMWV +L +K A + +A+ E K+ KL+A R+DRGGEF S +F YC E
Sbjct: 793 VDDYSRYMWVALLSTKDAAPAAIKRIQAAAERKSGRKLRALRTDRGGEFTSTQFAEYCAE 852
Query: 1624 LGIKRYLTASYSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPT 1803
LG++R LTA YSPQQNGVVERRNQ+V+G ARS+LK+K +P ++WGEA+ TAVYLLNR+ +
Sbjct: 853 LGMRRELTAPYSPQQNGVVERRNQSVVGTARSMLKAKGLPGMFWGEAINTAVYLLNRSSS 912
Query: 1804 QSLEGMTPYQAWMGRKPNVQHLRVLVAWHMSK**THTLKK-SNRSVPMVLFGYEPGSKAY 1980
+ + G TPY W G P V HLR K T LKK +RS PM+ GY+PGSKAY
Sbjct: 913 KGIGGKTPYALWNGVPPAVHHLRTFGCVAHVKTTTPNLKKLDDRSRPMIFVGYKPGSKAY 972
Query: 1981 RVYDSNQKKLHMSRDIIFDEDREWN*ESSTA 2073
R YD +++H+SRDI+FDE +W+ ++ A
Sbjct: 973 RAYDPATRRVHISRDIVFDEAAQWDWDAEAA 1003
Score = 238 bits (607), Expect(3) = e-145
Identities = 140/408 (34%), Positives = 216/408 (52%), Gaps = 16/408 (3%)
Frame = +3
Query: 108 ESVDEFAVQLNTVVSKMRAMGE-KMDDTAVVKVLQAVTPKFLQIASILEQFGDLRKMTAE 284
E+V++FA++L T+V+++ +G+ + D V K L+ P+F Q+ +E D+ ++ E
Sbjct: 345 ETVEDFALRLTTIVNQLATLGDPEPADKVVEKYLRVARPRFNQLILSIETLLDISTLSME 404
Query: 285 EVFGRLKAHEQL-RGFGDTEGEHMLLI*GEWEXXXXXXXXXXHDSGWKERDEGSDCXXXX 461
EV GRLKA E + T + L EW D K D GS
Sbjct: 405 EVTGRLKAAEDSGQSSLHTADGKLYLTEEEWAERQKKK-----DQEAKRGDSGSSGGRGK 459
Query: 462 XXXXXXXXXXXXXDERYNDSGKKYHKFDKAKIRCYNCQNYGHFASECR-KPKKEERAHFA 638
+ + K DK C NC GH+A +CR K K+EE+AH A
Sbjct: 460 RRGGRGRTGGGGTASPESTNSGSARKGDK----CRNCGKLGHWAKDCRSKSKREEQAHVA 515
Query: 639 EKQHDDEPTLLLTEGCESLYTAQGEREKMMFYEEKVKPRRSSEEVV-------------F 779
++ ++ +LLT GC A + P ++ E+V
Sbjct: 516 QEDEEEHTLMLLTGGCVDTVDAAAPEG-----DTPTPPHQAVVELVEMKVFAALDDAADH 570
Query: 780 ETDIWYLDTGASNHMTGCRKKFSDLNEKVCGRVKFSDGSVVEIKRRGTVMLQYQNGEHRL 959
+ W +D+GASNHMTG R F+DL+ + G V+ DGSVV I RGT++ +NGEHR
Sbjct: 571 DPGRWIMDSGASNHMTGSRMAFADLDTNITGNVRLGDGSVVRIAGRGTILFACKNGEHRT 630
Query: 960 LTNVYYIPKLCSSIMSLGQLDESGCNIVMERGHLHIYDRSGKLLANVRKSENRLYILNLK 1139
L+N YY+P+L ++I+S+GQLDE+G ++ E G + ++D +LLA + ++ RLY+L++
Sbjct: 631 LSNTYYLPRLTANIISIGQLDETGFKVLAEDGIMRVWDEQRRLLARIPRTPGRLYMLDIN 690
Query: 1140 VAHPVCLMGSLGDNAWRWHARYGHLNFPALRKLVQKEMVIGMPVVEHV 1283
+A PVCL ++AWRWHAR GH+NF AL K+ ++E+V G+P + V
Sbjct: 691 LARPVCLAAHADEDAWRWHARLGHINFRALCKMGKEELVRGLPCLSQV 738
Score = 35.4 bits (80), Expect(3) = e-145
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = +2
Query: 2 AKDGWAVLKSMYVGADRVTRAKLQTLKTEFEAL 100
A++ W +K+M VG DR+ +A Q +++E+E+L
Sbjct: 307 AREAWECIKTMRVGNDRIRKASAQKVRSEYESL 339
Score = 219 bits (559), Expect(5) = e-107
Identities = 113/191 (59%), Positives = 135/191 (70%), Gaps = 1/191 (0%)
Frame = +2
Query: 2483 RTRDLPKGHRTISLKWVYKVKKNPKGDVIKHKARLVAKGYVQKQGVDFNEVFVPVARLET 2662
R DLP GHR I LKWVYK+KK+ +G V+KHKARLVAKGYVQ+ G+DF+EVF PVARL++
Sbjct: 1149 RLVDLPSGHRPIGLKWVYKLKKDAQGVVVKHKARLVAKGYVQRAGIDFDEVFAPVARLDS 1208
Query: 2663 VRMLIALAVQEDGEVHHMDVKSTFLNGELEEEVYVAQPKGF-VEGHEEKVLRLKKALYGL 2839
VR+L+ALA QE VHHMDVKS FLNGEL EEVYV QP GF ++G E KV RL KALYGL
Sbjct: 1209 VRLLLALAAQEGWMVHHMDVKSAFLNGELIEEVYVVQPPGFEIDGQENKVYRLDKALYGL 1268
Query: 2840 RQVPHAWNSKLDKCLQSLGFERCPLKHAVYKKRXXXXXXXXXXXXXXXXITGSNVKDIVQ 3019
RQ P AWN+KLD L+ LGF++ PL+H +Y + I G + I
Sbjct: 1269 RQAPRAWNTKLDCTLKKLGFKQSPLEHGLYARGDGSGRLLVGVYVDDLVIVGGDSGMIKG 1328
Query: 3020 FKEQMKRLFEM 3052
FKEQMK F+M
Sbjct: 1329 FKEQMKAEFKM 1339
Score = 108 bits (271), Expect(5) = e-107
Identities = 55/89 (61%), Positives = 63/89 (70%)
Frame = +1
Query: 3082 IEVRQEPNAITISQSGYAMKILEKLKLADCNHCQVPMELRMKLSETDANPPVDTFMYRSV 3261
IEV QE IT+ Q+ Y +I+EK L CN C PME R+KLS+ A VD YRS+
Sbjct: 1351 IEVHQEAGIITLKQAAYVSRIVEKAGLTGCNPCATPMEPRLKLSKESAGSLVDATEYRSL 1410
Query: 3262 VGSLRYLVNTRPDLAYSVGVVSRYMEAPT 3348
VGSLRYLVNTRPDLAYSVG VSR+ME PT
Sbjct: 1411 VGSLRYLVNTRPDLAYSVGYVSRFMEKPT 1439
Score = 83.6 bits (205), Expect(5) = e-107
Identities = 42/79 (53%), Positives = 54/79 (68%)
Frame = +3
Query: 3354 HMAAVKQILWYV*GTINHGCVYPRRKESEAGLIGHSDSDLAEDVDDHKSTTGVIYFLGES 3533
H+AAVK+I+ YV GTI+ GC Y KE E GL G+SDSD+A D+D KSTTGVI+FLG++
Sbjct: 1442 HLAAVKRIIRYVAGTIHLGCRYV--KEGEGGLQGYSDSDMAGDIDTRKSTTGVIFFLGKN 1499
Query: 3534 PITWXXXXXXXXXXXXCES 3590
P++W CES
Sbjct: 1500 PVSWQSQKQRVVALSSCES 1518
Score = 41.2 bits (95), Expect(5) = e-107
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Frame = +3
Query: 2298 EKPLRYHSLQEIYDET-------REVEGEAALCFLSVEEPTTFEEANDSYCWKKAMAEEI 2456
+ PLR+ ++ + REV+ E L +S EEP TF +A W++AM +EI
Sbjct: 1082 DAPLRFRTMDNVLGPAMLPGLANREVQEE--LMMVSGEEPATFGQAERDEDWRRAMLDEI 1139
Query: 2457 AAIQRNHTCEL 2489
++I+ N T L
Sbjct: 1140 SSIEENKTWRL 1150
Score = 31.6 bits (70), Expect(5) = e-107
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 3587 EYVAATAVACQGVWLGR 3637
EY+AA ACQG+WL R
Sbjct: 1519 EYIAAATAACQGIWLAR 1535
>ref|NP_001064658.2| Os10g0429700, partial [Oryza sativa Japonica Group]
gi|255679425|dbj|BAF26572.2| Os10g0429700, partial [Oryza
sativa Japonica Group]
Length = 880
Score = 295 bits (754), Expect(3) = e-145
Identities = 143/271 (52%), Positives = 190/271 (70%), Gaps = 1/271 (0%)
Frame = +1
Query: 1264 CLS*ST*QIHDGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLL 1443
CLS Q+ + C+ GKH +PF R+D+PL L+HG+LCG ITPATP+ N+YF+LL
Sbjct: 538 CLS-QVDQVCEACLAGKHRRSPFPRQALCRSDEPLALLHGDLCGPITPATPSGNRYFLLL 596
Query: 1444 VDDHSRYMWVVMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEE 1623
VDD+SRYMWV +L +K A + +A+ E K+ KL+A R+DRGGEF S +F YC E
Sbjct: 597 VDDYSRYMWVALLSTKDAAPAAIKRIQAAAERKSGRKLRALRTDRGGEFTSTQFAEYCAE 656
Query: 1624 LGIKRYLTASYSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPT 1803
LG++R LTA YSPQQNGVVERRNQ+V+G ARS+LK+K +P ++WGEA+ TAVYLLNR+ +
Sbjct: 657 LGMRRELTAPYSPQQNGVVERRNQSVVGTARSMLKAKGLPGMFWGEAINTAVYLLNRSSS 716
Query: 1804 QSLEGMTPYQAWMGRKPNVQHLRVLVAWHMSK**THTLKK-SNRSVPMVLFGYEPGSKAY 1980
+ + G TPY W G P V HLR K T LKK +RS PM+ GY+PGSKAY
Sbjct: 717 KGIGGKTPYALWNGVPPAVHHLRTFGCVAHVKTTTPNLKKLDDRSRPMIFVGYKPGSKAY 776
Query: 1981 RVYDSNQKKLHMSRDIIFDEDREWN*ESSTA 2073
R YD +++H+SRDI+FDE +W+ ++ A
Sbjct: 777 RAYDPATRRVHISRDIVFDEAAQWDWDAEAA 807
Score = 238 bits (607), Expect(3) = e-145
Identities = 140/408 (34%), Positives = 216/408 (52%), Gaps = 16/408 (3%)
Frame = +3
Query: 108 ESVDEFAVQLNTVVSKMRAMGE-KMDDTAVVKVLQAVTPKFLQIASILEQFGDLRKMTAE 284
E+V++FA++L T+V+++ +G+ + D V K L+ P+F Q+ +E D+ ++ E
Sbjct: 149 ETVEDFALRLTTIVNQLATLGDPEPADKVVEKYLRVARPRFNQLILSIETLLDISTLSME 208
Query: 285 EVFGRLKAHEQL-RGFGDTEGEHMLLI*GEWEXXXXXXXXXXHDSGWKERDEGSDCXXXX 461
EV GRLKA E + T + L EW D K D GS
Sbjct: 209 EVTGRLKAAEDSGQSSLHTADGKLYLTEEEWAERQKKK-----DQEAKRGDSGSSGGRGK 263
Query: 462 XXXXXXXXXXXXXDERYNDSGKKYHKFDKAKIRCYNCQNYGHFASECR-KPKKEERAHFA 638
+ + K DK C NC GH+A +CR K K+EE+AH A
Sbjct: 264 RRGGRGRTGGGGTASPESTNSGSARKGDK----CRNCGKLGHWAKDCRSKSKREEQAHVA 319
Query: 639 EKQHDDEPTLLLTEGCESLYTAQGEREKMMFYEEKVKPRRSSEEVV-------------F 779
++ ++ +LLT GC A + P ++ E+V
Sbjct: 320 QEDEEEHTLMLLTGGCVDTVDAAAPEG-----DTPTPPHQAVVELVEMKVFAALDDAADH 374
Query: 780 ETDIWYLDTGASNHMTGCRKKFSDLNEKVCGRVKFSDGSVVEIKRRGTVMLQYQNGEHRL 959
+ W +D+GASNHMTG R F+DL+ + G V+ DGSVV I RGT++ +NGEHR
Sbjct: 375 DPGRWIMDSGASNHMTGSRMAFADLDTNITGNVRLGDGSVVRIAGRGTILFACKNGEHRT 434
Query: 960 LTNVYYIPKLCSSIMSLGQLDESGCNIVMERGHLHIYDRSGKLLANVRKSENRLYILNLK 1139
L+N YY+P+L ++I+S+GQLDE+G ++ E G + ++D +LLA + ++ RLY+L++
Sbjct: 435 LSNTYYLPRLTANIISIGQLDETGFKVLAEDGIMRVWDEQRRLLARIPRTPGRLYMLDIN 494
Query: 1140 VAHPVCLMGSLGDNAWRWHARYGHLNFPALRKLVQKEMVIGMPVVEHV 1283
+A PVCL ++AWRWHAR GH+NF AL K+ ++E+V G+P + V
Sbjct: 495 LARPVCLAAHADEDAWRWHARLGHINFRALCKMGKEELVRGLPCLSQV 542
Score = 35.4 bits (80), Expect(3) = e-145
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = +2
Query: 2 AKDGWAVLKSMYVGADRVTRAKLQTLKTEFEAL 100
A++ W +K+M VG DR+ +A Q +++E+E+L
Sbjct: 111 AREAWECIKTMRVGNDRIRKASAQKVRSEYESL 143
>emb|CAD41367.2| OSJNBa0088A01.6 [Oryza sativa Japonica Group]
Length = 1403
Score = 285 bits (728), Expect(3) = e-145
Identities = 142/264 (53%), Positives = 186/264 (70%), Gaps = 1/264 (0%)
Frame = +1
Query: 1285 QIHDGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLLVDDHSRY 1464
Q+ D C+I K PF + FRA+ L LVHG+LCG I+PATP +F+LL DD SRY
Sbjct: 558 QLCDSCVISKQRRTPFPRRSMFRAEDRLELVHGDLCGPISPATPGGKTHFLLL-DDASRY 616
Query: 1465 MWVVMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEELGIKRYL 1644
MW+ +L KSE A +F+A EA+++ KL+ R+D GGEF S EF +YC E G+ R+
Sbjct: 617 MWITLLGCKSEAADAIKRFQARAEAESKQKLRILRTDNGGEFTSVEFATYCAEQGVSRHF 676
Query: 1645 TASYSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPTQSLEGMT 1824
+A YSPQQNGVVERRNQT+LGMARSLLK+K++PA YWGEAV TAV+LLNRAPT+SL MT
Sbjct: 677 SAPYSPQQNGVVERRNQTILGMARSLLKAKNMPARYWGEAVTTAVFLLNRAPTKSLANMT 736
Query: 1825 PYQAWMGRKPNVQHLRVL-VAWHMSK**THTLKKSNRSVPMVLFGYEPGSKAYRVYDSNQ 2001
PY+AW G+KP V +LR ++ H K S+RS PMVL GY G+KAY+V+D
Sbjct: 737 PYEAWHGKKPAVGYLRTFGCLAYVKDVRPHLPKLSDRSKPMVLIGYADGAKAYKVFDPVS 796
Query: 2002 KKLHMSRDIIFDEDREWN*ESSTA 2073
++ +SRD+IFDE W+ +++ A
Sbjct: 797 GRVQVSRDVIFDEGAGWDWDAAGA 820
Score = 246 bits (628), Expect(3) = e-145
Identities = 150/407 (36%), Positives = 226/407 (55%), Gaps = 15/407 (3%)
Frame = +3
Query: 108 ESVDEFAVQLNTVVSKMRAMGEKMDDTAVV-KVLQAVTPKFLQIASILEQFGDLRKMTAE 284
E+V+EF+++LN +V+ + +G +++ VV K L +V QIA +E DL ++T E
Sbjct: 155 ETVEEFSLRLNGLVTNLATLGVHLEEGKVVEKFLNSVPDHLSQIALSIETLLDLDELTLE 214
Query: 285 EVFGRLK-AHEQLRGFGDTEGEHMLLI*GEWEXXXXXXXXXXHDSGWKERDEGSDCXXXX 461
EV GRL+ A E+L G + L +W SG + G+
Sbjct: 215 EVTGRLRNAEEKLPAKSSAAGGKLFLTEEQWTARWKEKQAAESSSGKAKSGGGNRRRRGG 274
Query: 462 XXXXXXXXXXXXXDERYNDSGKKYHKFDKAKIRCYNCQNYGHFASECRKPKKEERAHFA- 638
R G++ ++ DK C NC GH+A +CR+PK+ A+ A
Sbjct: 275 KKKAEAAAHDGDRAGRDTQEGREPNR-DK----CRNCGRTGHWAKDCRQPKRPAEAYQAL 329
Query: 639 EKQHDDEPTLLLTEGCESLYTAQGEREKMMFYEEKVKPRRSSEEV---VF-------ETD 788
+ DDEP LL+ ++ + +P ++ E V VF +TD
Sbjct: 330 ADEDDDEPALLMAHVVDAAPVSASSSSAPPASSPPSQPDKTIELVEPKVFAHLLTEKQTD 389
Query: 789 --IWYLDTGASNHMTGCRKKFSDLNEKVCGRVKFSDGSVVEIKRRGTVMLQYQNGEHRLL 962
+W+LDTGA+NHMTG R+ F++L+ V G V+F DGSVV I+ RG ++ + +N EHR L
Sbjct: 390 GGVWHLDTGATNHMTGIREVFAELDLSVRGSVRFGDGSVVGIEGRGKIIFECRNQEHRAL 449
Query: 963 TNVYYIPKLCSSIMSLGQLDESGCNIVMERGHLHIYDRSGKLLANVRKSENRLYILNLKV 1142
T VYYIPKL ++++SLGQLDE+GC++ + G I D + +LLA V+++ NRLY++ L +
Sbjct: 450 TGVYYIPKLNANLISLGQLDENGCDVRIYHGVCTIRDPAAQLLARVQRTRNRLYLIKLTI 509
Query: 1143 AHPVCLMGSLGDNAWRWHARYGHLNFPALRKLVQKEMVIGMPVVEHV 1283
PVCL + AW WHARYGHL+F ALR+L ++MV GMP ++HV
Sbjct: 510 GQPVCLAAKAQECAWLWHARYGHLHFDALRRLASRDMVRGMPDIDHV 556
Score = 36.6 bits (83), Expect(3) = e-145
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +2
Query: 2 AKDGWAVLKSMYVGADRVTRAKLQTLKTEFEAL 100
AK+ W +K+M VG DRV ++K Q L+ +++A+
Sbjct: 117 AKEAWDAIKTMRVGVDRVRKSKAQMLQKQYDAM 149
Score = 220 bits (561), Expect(5) = e-102
Identities = 115/191 (60%), Positives = 134/191 (70%), Gaps = 1/191 (0%)
Frame = +2
Query: 2483 RTRDLPKGHRTISLKWVYKVKKNPKGDVIKHKARLVAKGYVQKQGVDFNEVFVPVARLET 2662
R DLP GHR I LKWV+K+KK+ +G V KHKARL+AKGYVQ+ G+DF EVF PVARLE+
Sbjct: 920 RLVDLPSGHRAIGLKWVFKLKKDAEGRVAKHKARLIAKGYVQQPGIDFEEVFTPVARLES 979
Query: 2663 VRMLIALAVQEDGEVHHMDVKSTFLNGELEEEVYVAQPKGFV-EGHEEKVLRLKKALYGL 2839
VR+L+A A Q VHHMDVKS FLNGEL EEVYV QP GFV EG E +VLRL KALYGL
Sbjct: 980 VRLLLAQAAQAGWTVHHMDVKSAFLNGELAEEVYVKQPPGFVKEGREHQVLRLDKALYGL 1039
Query: 2840 RQVPHAWNSKLDKCLQSLGFERCPLKHAVYKKRXXXXXXXXXXXXXXXXITGSNVKDIVQ 3019
RQ P AWNSKL+ L SLGF R +HAVY + ITG+ +IV+
Sbjct: 1040 RQAPRAWNSKLEATLLSLGFRRNDCEHAVYVRGNTSARLLVGVYVDDLIITGTKEDEIVR 1099
Query: 3020 FKEQMKRLFEM 3052
FK +MK LF+M
Sbjct: 1100 FKGEMKALFKM 1110
Score = 100 bits (249), Expect(5) = e-102
Identities = 50/90 (55%), Positives = 64/90 (71%)
Frame = +1
Query: 3082 IEVRQEPNAITISQSGYAMKILEKLKLADCNHCQVPMELRMKLSETDANPPVDTFMYRSV 3261
IEV Q +I +SQ+ YA +ILE+ + CN PME R+KLS+T A V+ YR +
Sbjct: 1122 IEVEQVAGSIRLSQAAYARRILERAGMLGCNPSATPMEQRLKLSKTSAAASVNPTWYRGI 1181
Query: 3262 VGSLRYLVNTRPDLAYSVGVVSRYMEAPTT 3351
VG LRYLV+TRPD+A+SVG VSR+MEAPTT
Sbjct: 1182 VGCLRYLVHTRPDIAFSVGYVSRFMEAPTT 1211
Score = 72.8 bits (177), Expect(5) = e-102
Identities = 36/79 (45%), Positives = 48/79 (60%)
Frame = +3
Query: 3354 HMAAVKQILWYV*GTINHGCVYPRRKESEAGLIGHSDSDLAEDVDDHKSTTGVIYFLGES 3533
H AAVK+IL Y+ GT GC Y + S L+G+SD+D+A D D KSTTGV++FLG S
Sbjct: 1213 HEAAVKRILRYIAGTTEFGCHY-HQSSSPVQLVGYSDADMAGDPDTRKSTTGVVFFLGTS 1271
Query: 3534 PITWXXXXXXXXXXXXCES 3590
P++W CE+
Sbjct: 1272 PVSWQSVKQKVVALSSCEA 1290
Score = 42.4 bits (98), Expect(5) = e-102
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +3
Query: 2343 TREVEGEAALCFLSVEEPTTFEEANDSYCWKKAMAEEIAAIQRNHTCEL 2489
TR+ E E L L+ EEP +F EA W++AM +EIA+I+ N+T L
Sbjct: 874 TRDPE-EGELHLLAAEEPASFTEAEQRQEWRRAMLDEIASIEENNTWRL 921
Score = 32.3 bits (72), Expect(5) = e-102
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2
Query: 3587 EYVAATAVACQGVWLGR 3637
EY+AAT ACQGVWL +
Sbjct: 1291 EYIAATTAACQGVWLSQ 1307
>ref|NP_001068460.1| Os11g0682500, partial [Oryza sativa Japonica Group]
gi|113645682|dbj|BAF28823.1| Os11g0682500, partial [Oryza
sativa Japonica Group]
Length = 1457
Score = 295 bits (755), Expect(3) = e-144
Identities = 144/271 (53%), Positives = 190/271 (70%), Gaps = 1/271 (0%)
Frame = +1
Query: 1264 CLS*ST*QIHDGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLL 1443
CLS Q+ + C+ GKH +PF R+D+PL L+HG+LCG ITPATP+ N+YF+LL
Sbjct: 566 CLS-QVDQVCEACLAGKHRRSPFPRQALCRSDEPLALLHGDLCGPITPATPSGNRYFLLL 624
Query: 1444 VDDHSRYMWVVMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEE 1623
VDD+SRYMWV +L +K A + +A+ E K+ KL+A R+DRGGEF S +F YC E
Sbjct: 625 VDDYSRYMWVALLSTKDAAPAAIKRIQAAAERKSGRKLRALRTDRGGEFTSTQFAEYCAE 684
Query: 1624 LGIKRYLTASYSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPT 1803
LG++R LTA YSPQQNGVVERRNQ+V+G ARS+LK+K +P ++WGEA+ TAVYLLNR+ +
Sbjct: 685 LGMRRELTAPYSPQQNGVVERRNQSVVGTARSMLKAKGLPGMFWGEAINTAVYLLNRSSS 744
Query: 1804 QSLEGMTPYQAWMGRKPNVQHLRVLVAWHMSK**THTLKK-SNRSVPMVLFGYEPGSKAY 1980
+ + G TPY W G P V HLR K T LKK +RS PM+ GYEPGSKAY
Sbjct: 745 KGIGGKTPYALWNGVPPAVHHLRTFGCVAHVKTTTPNLKKLDDRSRPMIFVGYEPGSKAY 804
Query: 1981 RVYDSNQKKLHMSRDIIFDEDREWN*ESSTA 2073
R YD +++H+SRDI+FDE +W+ ++ A
Sbjct: 805 RGYDPATRRVHISRDIVFDEAAQWDWDAEAA 835
Score = 236 bits (603), Expect(3) = e-144
Identities = 138/408 (33%), Positives = 215/408 (52%), Gaps = 16/408 (3%)
Frame = +3
Query: 108 ESVDEFAVQLNTVVSKMRAMGE-KMDDTAVVKVLQAVTPKFLQIASILEQFGDLRKMTAE 284
E+V++FA++L T+V+++ +G+ + D V K L+ P+F Q+ +E D+ ++ E
Sbjct: 177 ETVEDFALRLTTIVNQLATLGDPEPADKVVEKYLRVARPRFNQLILSIETLLDISTLSME 236
Query: 285 EVFGRLKAHEQL-RGFGDTEGEHMLLI*GEWEXXXXXXXXXXHDSGWKERDEGSDCXXXX 461
EV GRLKA E + T G + L EW D K D G
Sbjct: 237 EVTGRLKAAEDSGQSSSHTAGGKLYLTEEEW-----AERQKKKDQEAKRGDSGGSGGRGK 291
Query: 462 XXXXXXXXXXXXXDERYNDSGKKYHKFDKAKIRCYNCQNYGHFASECR-KPKKEERAHFA 638
+ + K DK C NC GH+A +CR K K+EE+AH A
Sbjct: 292 RRGGRGRTGGGGTASPESTNSGSARKGDK----CRNCGKLGHWAKDCRSKSKREEQAHVA 347
Query: 639 EKQHDDEPTLLLTEGCESLYTAQGEREKMMFYEEKVKPRRSSEEVV-------------F 779
++ ++ +LLT GC A + P ++ E+V
Sbjct: 348 QEDEEEHTLMLLTGGCVDTVDAAAPEG-----DTPTPPHQAVVELVEMKVFAALDDAADH 402
Query: 780 ETDIWYLDTGASNHMTGCRKKFSDLNEKVCGRVKFSDGSVVEIKRRGTVMLQYQNGEHRL 959
+ W +D+GASNHMTG R F+DL+ + V+ DGSVV I RGT++ +NGEHR
Sbjct: 403 DPGRWIMDSGASNHMTGSRMAFADLDTNITWNVRLGDGSVVRIAGRGTILFACKNGEHRT 462
Query: 960 LTNVYYIPKLCSSIMSLGQLDESGCNIVMERGHLHIYDRSGKLLANVRKSENRLYILNLK 1139
L+N Y++P+L ++I+S+GQLDE+G ++ E G + ++D +LLA + ++ RLY+L++
Sbjct: 463 LSNTYFLPRLAANIISIGQLDETGFKVLAEDGIMRVWDEQRRLLARIPRTPGRLYMLDIN 522
Query: 1140 VAHPVCLMGSLGDNAWRWHARYGHLNFPALRKLVQKEMVIGMPVVEHV 1283
+A PVCL ++AWRWHAR GH+NF AL K+ ++E+V G+P + V
Sbjct: 523 LARPVCLAAHADEDAWRWHARLGHINFRALCKMGKEELVRGLPCLSQV 570
Score = 35.0 bits (79), Expect(3) = e-144
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +2
Query: 2 AKDGWAVLKSMYVGADRVTRAKLQTLKTEFEAL 100
A++ W +K+M VG DR+ +A Q ++ E+E+L
Sbjct: 139 AREAWECIKTMRVGNDRIRKASAQKVRAEYESL 171
Score = 219 bits (559), Expect(5) = e-108
Identities = 113/191 (59%), Positives = 135/191 (70%), Gaps = 1/191 (0%)
Frame = +2
Query: 2483 RTRDLPKGHRTISLKWVYKVKKNPKGDVIKHKARLVAKGYVQKQGVDFNEVFVPVARLET 2662
R DLP GHR I LKWVYK+KK+ +G V+KHKARLVAKGYVQ+ G+DF+EVF PVARL++
Sbjct: 981 RLVDLPSGHRPIGLKWVYKLKKDAQGVVVKHKARLVAKGYVQRAGIDFDEVFAPVARLDS 1040
Query: 2663 VRMLIALAVQEDGEVHHMDVKSTFLNGELEEEVYVAQPKGF-VEGHEEKVLRLKKALYGL 2839
VR+L+ALA QE VHHMDVKS FLNGEL EEVYV QP GF ++G E KV RL KALYGL
Sbjct: 1041 VRLLLALAAQEGWMVHHMDVKSAFLNGELIEEVYVVQPPGFEIDGQENKVYRLDKALYGL 1100
Query: 2840 RQVPHAWNSKLDKCLQSLGFERCPLKHAVYKKRXXXXXXXXXXXXXXXXITGSNVKDIVQ 3019
RQ P AWN+KLD L+ LGF++ PL+H +Y + I G + I
Sbjct: 1101 RQAPRAWNTKLDCTLKKLGFKQSPLEHGLYARGDGSGRLLVGVYVDDLVIVGGDSGMIKG 1160
Query: 3020 FKEQMKRLFEM 3052
FKEQMK F+M
Sbjct: 1161 FKEQMKAEFKM 1171
Score = 110 bits (275), Expect(5) = e-108
Identities = 56/89 (62%), Positives = 64/89 (71%)
Frame = +1
Query: 3082 IEVRQEPNAITISQSGYAMKILEKLKLADCNHCQVPMELRMKLSETDANPPVDTFMYRSV 3261
IEV QE IT+ Q+ YA +I+EK L CN C PME R+KLS+ A VD YRS+
Sbjct: 1183 IEVHQEAGIITLKQAAYASRIVEKAGLTGCNPCATPMEPRLKLSKESAGSLVDATEYRSL 1242
Query: 3262 VGSLRYLVNTRPDLAYSVGVVSRYMEAPT 3348
VGSLRYLVNTRPDLAYSVG VSR+ME PT
Sbjct: 1243 VGSLRYLVNTRPDLAYSVGYVSRFMEKPT 1271
Score = 83.6 bits (205), Expect(5) = e-108
Identities = 42/79 (53%), Positives = 54/79 (68%)
Frame = +3
Query: 3354 HMAAVKQILWYV*GTINHGCVYPRRKESEAGLIGHSDSDLAEDVDDHKSTTGVIYFLGES 3533
H+AAVK+I+ YV GTI+ GC Y KE E GL G+SDSD+A D+D KSTTGVI+FLG++
Sbjct: 1274 HLAAVKRIIRYVAGTIHLGCRYV--KEGEGGLQGYSDSDMAGDIDTRKSTTGVIFFLGKN 1331
Query: 3534 PITWXXXXXXXXXXXXCES 3590
P++W CES
Sbjct: 1332 PVSWQSQKQRVVALSSCES 1350
Score = 41.6 bits (96), Expect(5) = e-108
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Frame = +3
Query: 2298 EKPLRYHSLQEIYD-------ETREVEGEAALCFLSVEEPTTFEEANDSYCWKKAMAEEI 2456
+ PLR+ ++ + REV+ E L +S EEP TF +A W++AM +EI
Sbjct: 914 DAPLRFRTMDNVLGLAMLPGLANREVQEE--LMMVSGEEPATFAQAERDEDWRRAMLDEI 971
Query: 2457 AAIQRNHTCEL 2489
++I+ N T L
Sbjct: 972 SSIEENKTWRL 982
Score = 31.6 bits (70), Expect(5) = e-108
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 3587 EYVAATAVACQGVWLGR 3637
EY+AA ACQG+WL R
Sbjct: 1351 EYIAAATAACQGIWLAR 1367
>gb|ABA95283.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group] gi|215767919|dbj|BAH00148.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 1369
Score = 295 bits (755), Expect(3) = e-144
Identities = 144/271 (53%), Positives = 190/271 (70%), Gaps = 1/271 (0%)
Frame = +1
Query: 1264 CLS*ST*QIHDGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLL 1443
CLS Q+ + C+ GKH +PF R+D+PL L+HG+LCG ITPATP+ N+YF+LL
Sbjct: 478 CLS-QVDQVCEACLAGKHRRSPFPRQALCRSDEPLALLHGDLCGPITPATPSGNRYFLLL 536
Query: 1444 VDDHSRYMWVVMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEE 1623
VDD+SRYMWV +L +K A + +A+ E K+ KL+A R+DRGGEF S +F YC E
Sbjct: 537 VDDYSRYMWVALLSTKDAAPAAIKRIQAAAERKSGRKLRALRTDRGGEFTSTQFAEYCAE 596
Query: 1624 LGIKRYLTASYSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPT 1803
LG++R LTA YSPQQNGVVERRNQ+V+G ARS+LK+K +P ++WGEA+ TAVYLLNR+ +
Sbjct: 597 LGMRRELTAPYSPQQNGVVERRNQSVVGTARSMLKAKGLPGMFWGEAINTAVYLLNRSSS 656
Query: 1804 QSLEGMTPYQAWMGRKPNVQHLRVLVAWHMSK**THTLKK-SNRSVPMVLFGYEPGSKAY 1980
+ + G TPY W G P V HLR K T LKK +RS PM+ GYEPGSKAY
Sbjct: 657 KGIGGKTPYALWNGVPPAVHHLRTFGCVAHVKTTTPNLKKLDDRSRPMIFVGYEPGSKAY 716
Query: 1981 RVYDSNQKKLHMSRDIIFDEDREWN*ESSTA 2073
R YD +++H+SRDI+FDE +W+ ++ A
Sbjct: 717 RGYDPATRRVHISRDIVFDEAAQWDWDAEAA 747
Score = 236 bits (603), Expect(3) = e-144
Identities = 138/408 (33%), Positives = 215/408 (52%), Gaps = 16/408 (3%)
Frame = +3
Query: 108 ESVDEFAVQLNTVVSKMRAMGE-KMDDTAVVKVLQAVTPKFLQIASILEQFGDLRKMTAE 284
E+V++FA++L T+V+++ +G+ + D V K L+ P+F Q+ +E D+ ++ E
Sbjct: 89 ETVEDFALRLTTIVNQLATLGDPEPADKVVEKYLRVARPRFNQLILSIETLLDISTLSME 148
Query: 285 EVFGRLKAHEQL-RGFGDTEGEHMLLI*GEWEXXXXXXXXXXHDSGWKERDEGSDCXXXX 461
EV GRLKA E + T G + L EW D K D G
Sbjct: 149 EVTGRLKAAEDSGQSSSHTAGGKLYLTEEEW-----AERQKKKDQEAKRGDSGGSGGRGK 203
Query: 462 XXXXXXXXXXXXXDERYNDSGKKYHKFDKAKIRCYNCQNYGHFASECR-KPKKEERAHFA 638
+ + K DK C NC GH+A +CR K K+EE+AH A
Sbjct: 204 RRGGRGRTGGGGTASPESTNSGSARKGDK----CRNCGKLGHWAKDCRSKSKREEQAHVA 259
Query: 639 EKQHDDEPTLLLTEGCESLYTAQGEREKMMFYEEKVKPRRSSEEVV-------------F 779
++ ++ +LLT GC A + P ++ E+V
Sbjct: 260 QEDEEEHTLMLLTGGCVDTVDAAAPEG-----DTPTPPHQAVVELVEMKVFAALDDAADH 314
Query: 780 ETDIWYLDTGASNHMTGCRKKFSDLNEKVCGRVKFSDGSVVEIKRRGTVMLQYQNGEHRL 959
+ W +D+GASNHMTG R F+DL+ + V+ DGSVV I RGT++ +NGEHR
Sbjct: 315 DPGRWIMDSGASNHMTGSRMAFADLDTNITWNVRLGDGSVVRIAGRGTILFACKNGEHRT 374
Query: 960 LTNVYYIPKLCSSIMSLGQLDESGCNIVMERGHLHIYDRSGKLLANVRKSENRLYILNLK 1139
L+N Y++P+L ++I+S+GQLDE+G ++ E G + ++D +LLA + ++ RLY+L++
Sbjct: 375 LSNTYFLPRLAANIISIGQLDETGFKVLAEDGIMRVWDEQRRLLARIPRTPGRLYMLDIN 434
Query: 1140 VAHPVCLMGSLGDNAWRWHARYGHLNFPALRKLVQKEMVIGMPVVEHV 1283
+A PVCL ++AWRWHAR GH+NF AL K+ ++E+V G+P + V
Sbjct: 435 LARPVCLAAHADEDAWRWHARLGHINFRALCKMGKEELVRGLPCLSQV 482
Score = 35.0 bits (79), Expect(3) = e-144
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +2
Query: 2 AKDGWAVLKSMYVGADRVTRAKLQTLKTEFEAL 100
A++ W +K+M VG DR+ +A Q ++ E+E+L
Sbjct: 51 AREAWECIKTMRVGNDRIRKASAQKVRAEYESL 83
Score = 219 bits (559), Expect(5) = e-108
Identities = 113/191 (59%), Positives = 135/191 (70%), Gaps = 1/191 (0%)
Frame = +2
Query: 2483 RTRDLPKGHRTISLKWVYKVKKNPKGDVIKHKARLVAKGYVQKQGVDFNEVFVPVARLET 2662
R DLP GHR I LKWVYK+KK+ +G V+KHKARLVAKGYVQ+ G+DF+EVF PVARL++
Sbjct: 893 RLVDLPSGHRPIGLKWVYKLKKDAQGVVVKHKARLVAKGYVQRAGIDFDEVFAPVARLDS 952
Query: 2663 VRMLIALAVQEDGEVHHMDVKSTFLNGELEEEVYVAQPKGF-VEGHEEKVLRLKKALYGL 2839
VR+L+ALA QE VHHMDVKS FLNGEL EEVYV QP GF ++G E KV RL KALYGL
Sbjct: 953 VRLLLALAAQEGWMVHHMDVKSAFLNGELIEEVYVVQPPGFEIDGQENKVYRLDKALYGL 1012
Query: 2840 RQVPHAWNSKLDKCLQSLGFERCPLKHAVYKKRXXXXXXXXXXXXXXXXITGSNVKDIVQ 3019
RQ P AWN+KLD L+ LGF++ PL+H +Y + I G + I
Sbjct: 1013 RQAPRAWNTKLDCTLKKLGFKQSPLEHGLYARGDGSGRLLVGVYVDDLVIVGGDSGMIKG 1072
Query: 3020 FKEQMKRLFEM 3052
FKEQMK F+M
Sbjct: 1073 FKEQMKAEFKM 1083
Score = 110 bits (275), Expect(5) = e-108
Identities = 56/89 (62%), Positives = 64/89 (71%)
Frame = +1
Query: 3082 IEVRQEPNAITISQSGYAMKILEKLKLADCNHCQVPMELRMKLSETDANPPVDTFMYRSV 3261
IEV QE IT+ Q+ YA +I+EK L CN C PME R+KLS+ A VD YRS+
Sbjct: 1095 IEVHQEAGIITLKQAAYASRIVEKAGLTGCNPCATPMEPRLKLSKESAGSLVDATEYRSL 1154
Query: 3262 VGSLRYLVNTRPDLAYSVGVVSRYMEAPT 3348
VGSLRYLVNTRPDLAYSVG VSR+ME PT
Sbjct: 1155 VGSLRYLVNTRPDLAYSVGYVSRFMEKPT 1183
Score = 83.6 bits (205), Expect(5) = e-108
Identities = 42/79 (53%), Positives = 54/79 (68%)
Frame = +3
Query: 3354 HMAAVKQILWYV*GTINHGCVYPRRKESEAGLIGHSDSDLAEDVDDHKSTTGVIYFLGES 3533
H+AAVK+I+ YV GTI+ GC Y KE E GL G+SDSD+A D+D KSTTGVI+FLG++
Sbjct: 1186 HLAAVKRIIRYVAGTIHLGCRYV--KEGEGGLQGYSDSDMAGDIDTRKSTTGVIFFLGKN 1243
Query: 3534 PITWXXXXXXXXXXXXCES 3590
P++W CES
Sbjct: 1244 PVSWQSQKQRVVALSSCES 1262
Score = 41.6 bits (96), Expect(5) = e-108
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Frame = +3
Query: 2298 EKPLRYHSLQEIYD-------ETREVEGEAALCFLSVEEPTTFEEANDSYCWKKAMAEEI 2456
+ PLR+ ++ + REV+ E L +S EEP TF +A W++AM +EI
Sbjct: 826 DAPLRFRTMDNVLGLAMLPGLANREVQEE--LMMVSGEEPATFAQAERDEDWRRAMLDEI 883
Query: 2457 AAIQRNHTCEL 2489
++I+ N T L
Sbjct: 884 SSIEENKTWRL 894
Score = 31.6 bits (70), Expect(5) = e-108
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 3587 EYVAATAVACQGVWLGR 3637
EY+AA ACQG+WL R
Sbjct: 1263 EYIAAATAACQGIWLAR 1279
>emb|CAE03128.3| OJ000114_01.9 [Oryza sativa Japonica Group]
Length = 1601
Score = 291 bits (745), Expect(3) = e-144
Identities = 139/256 (54%), Positives = 181/256 (70%)
Frame = +1
Query: 1285 QIHDGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLLVDDHSRY 1464
Q+ D C++ K PF T+FRA + L LVHG+LCG +TPATP +YF+LLVDD SRY
Sbjct: 675 QLCDVCVVTKQRRLPFPQQTSFRAKERLGLVHGDLCGPVTPATPGGRRYFLLLVDDLSRY 734
Query: 1465 MWVVMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEELGIKRYL 1644
MWV++L SK E A +A+ EA+ KL+ R+D GGEF + EF SYC + GI+R+
Sbjct: 735 MWVMVLGSKGEAADAIRHAQAAAEAECGRKLRVLRTDNGGEFTAAEFASYCADEGIQRHY 794
Query: 1645 TASYSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPTQSLEGMT 1824
TA YSPQQNGVVERRNQTV+GMAR+LLK + +PA++WGEAV TA Y+LNR+PT++L+G T
Sbjct: 795 TAPYSPQQNGVVERRNQTVVGMARALLKQRGMPAIFWGEAVVTAAYILNRSPTKALDGRT 854
Query: 1825 PYQAWMGRKPNVQHLRVLVAWHMSK**THTLKKSNRSVPMVLFGYEPGSKAYRVYDSNQK 2004
PY+AW GRKP V HLRV +K H K +RS P V GY GSKAYR+ D +
Sbjct: 855 PYEAWHGRKPAVSHLRVFGCLAFAKELGHIGKLDDRSTPGVFIGYAEGSKAYRILDPETQ 914
Query: 2005 KLHMSRDIIFDEDREW 2052
++ ++RD++FDE R W
Sbjct: 915 RVRITRDVVFDEGRGW 930
Score = 243 bits (621), Expect(3) = e-144
Identities = 158/413 (38%), Positives = 220/413 (53%), Gaps = 21/413 (5%)
Frame = +3
Query: 108 ESVDEFAVQLNTVVSKMRAMGEKM--DDTAVVKVLQAVTPKFLQIASILEQFGDLRKMTA 281
E VD+FA++LNT++ KM G+ ++ AV K+ + V K+ QIA +E DL M+
Sbjct: 279 EDVDDFALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYRQIARSIESLLDLSTMSI 338
Query: 282 EEVFGRLKAHEQLRGFGD---------TEGEHMLLI*GEWEXXXXXXXXXXHDSGWKERD 434
EE GRLK + GD T G + L +WE G + +
Sbjct: 339 EEALGRLKVVD-----GDEPRPLSGPITIGGKLHLTREQWEA----------SQGDRRKG 383
Query: 435 EGSDCXXXXXXXXXXXXXXXXXDERYNDSGKKY---------HKFDKAKIRCYNCQNYGH 587
E S R + G + HK + C NC GH
Sbjct: 384 ESSSPTGGHKPRKARGGVQLRWARRRAEGGARRGAQGVATGNHKPARDDT-CRNCGKLGH 442
Query: 588 FASECRKPKKEERAHFAEKQHDDEPTLLLTEGCESLYTAQGEREKMMFYEE-KVKPRRSS 764
+A +CR+P++ + AH A + ++EP LLL L A + +E KV
Sbjct: 443 WAKDCRQPRRGQ-AHVARVE-EEEPALLLAHASIELPPAAPAAAAFLHLDEPKVLVSLCD 500
Query: 765 EEVVFETDIWYLDTGASNHMTGCRKKFSDLNEKVCGRVKFSDGSVVEIKRRGTVMLQYQN 944
+ D WYLDTGA++HMTG R+ F++ + V G VKF D S VEIK G+V ++
Sbjct: 501 GSSNDKADGWYLDTGATHHMTGRREFFTEFDSSVRGTVKFGDASGVEIKGVGSVTFTAKS 560
Query: 945 GEHRLLTNVYYIPKLCSSIMSLGQLDESGCNIVMERGHLHIYDRSGKLLANVRKSENRLY 1124
GEHRLLT VYYIP L +SI+S+GQLDE+G +++E G + I+DR +LLA V + NRLY
Sbjct: 561 GEHRLLTGVYYIPALRNSIISVGQLDENGSRVLVEDGLMRIWDRRRRLLAKVTRGTNRLY 620
Query: 1125 ILNLKVAHPVCLMGSLGDNAWRWHARYGHLNFPALRKLVQKEMVIGMPVVEHV 1283
IL+ +VAHPVCL D AW+WH R+GHL+F AL++L KEMV GMP ++HV
Sbjct: 621 ILSAQVAHPVCLAARRDDEAWQWHERFGHLHFEALKQLSAKEMVRGMPCLDHV 673
Score = 30.8 bits (68), Expect(3) = e-144
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 2 AKDGWAVLKSMYVGADRVTRAKLQTLKTEFEAL 100
AK+ W + + +G+DR ++ LQ L+ E+E L
Sbjct: 241 AKEAWDAIAAARIGSDRARKSTLQALRKEWENL 273
Score = 215 bits (547), Expect(5) = 5e-95
Identities = 103/188 (54%), Positives = 138/188 (73%), Gaps = 1/188 (0%)
Frame = +2
Query: 2492 DLPKGHRTISLKWVYKVKKNPKGDVIKHKARLVAKGYVQKQGVDFNEVFVPVARLETVRM 2671
DLP+GHR I+LKWV+K+K++ G ++KHKARLVA+G+VQ++G+D+++ F PVAR+E+VR+
Sbjct: 1119 DLPRGHRAITLKWVFKLKRDEAGAIVKHKARLVARGFVQQEGIDYDDAFAPVARMESVRL 1178
Query: 2672 LIALAVQEDGEVHHMDVKSTFLNGELEEEVYVAQPKGFV-EGHEEKVLRLKKALYGLRQV 2848
L+ALA QE VHHMDVKS FLNG+L+EEVYV QP GFV G E KVLRL KALYGLRQ
Sbjct: 1179 LLALAAQEGWGVHHMDVKSAFLNGDLKEEVYVHQPPGFVIPGKEGKVLRLHKALYGLRQA 1238
Query: 2849 PHAWNSKLDKCLQSLGFERCPLKHAVYKKRXXXXXXXXXXXXXXXXITGSNVKDIVQFKE 3028
P AWN+KLD L+ +GFE+ P + A+Y++ ITG+ ++ FKE
Sbjct: 1239 PRAWNAKLDSTLKGMGFEQSPHEAAIYRRGNGGNALLVGVYVDDLVITGTKDAEVAAFKE 1298
Query: 3029 QMKRLFEM 3052
+MK F+M
Sbjct: 1299 EMKATFQM 1306
Score = 97.8 bits (242), Expect(5) = 5e-95
Identities = 48/90 (53%), Positives = 61/90 (67%)
Frame = +1
Query: 3082 IEVRQEPNAITISQSGYAMKILEKLKLADCNHCQVPMELRMKLSETDANPPVDTFMYRSV 3261
IEV Q+ + IT+ Q+ YA +++E L DCN PME R+KLS VD YR +
Sbjct: 1318 IEVHQDNSGITLRQTAYAKRVVELAGLTDCNPALTPMEERLKLSRDSTAEEVDATQYRRL 1377
Query: 3262 VGSLRYLVNTRPDLAYSVGVVSRYMEAPTT 3351
VGSLRYL +TRPDLA+SVG VSR+M+ PTT
Sbjct: 1378 VGSLRYLTHTRPDLAFSVGYVSRFMQRPTT 1407
Score = 67.4 bits (163), Expect(5) = 5e-95
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 3354 HMAAVKQILWYV*GTINHGCVYPRRKESEAGLIGHSDSDLAEDVDDHKSTTGVIYFLGES 3533
H AVK+I+ YV GT++HG YPR +A +G+SDSD A D+D KST+G+++FL E
Sbjct: 1409 HQQAVKRIIRYVAGTLDHGLYYPRCP-GKAHFVGYSDSDHAGDIDTSKSTSGILFFLDEC 1467
Query: 3534 PITWXXXXXXXXXXXXCES 3590
++W CE+
Sbjct: 1468 LVSWQSIKQQVVALSSCEA 1486
Score = 37.7 bits (86), Expect(5) = 5e-95
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Frame = +3
Query: 2241 ELTTTLLHNEGTPDFSTSSEKPLRYHSLQEIYDET-------REVEGEAALCFLSVEEPT 2399
E T L H+ D E+ LRY +++++ + R +E + L EP
Sbjct: 1030 EFVTPLSHDGERIDAYHDGEQ-LRYRTMEDLLGDQPVPGLVPRNLEAQLHLA-CDDGEPR 1087
Query: 2400 TFEEANDSYCWKKAMAEEIAAIQRNHTCELEIFRKG 2507
+F EA W+ AM E+ A+Q N T EL +G
Sbjct: 1088 SFAEAEKHAAWRAAMQSEMDAVQENRTWELADLPRG 1123
Score = 24.6 bits (52), Expect(5) = 5e-95
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 3587 EYVAATAVACQGVWLGR 3637
EY+AA+A + Q +WL R
Sbjct: 1487 EYMAASAASTQALWLAR 1503
>gb|AAN05503.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1586
Score = 291 bits (745), Expect(3) = e-144
Identities = 139/256 (54%), Positives = 181/256 (70%)
Frame = +1
Query: 1285 QIHDGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLLVDDHSRY 1464
Q+ D C++ K PF T+FRA + L LVHG+LCG +TPATP +YF+LLVDD SRY
Sbjct: 675 QLCDVCVVTKQRRLPFPQQTSFRAKERLGLVHGDLCGPVTPATPGGRRYFLLLVDDLSRY 734
Query: 1465 MWVVMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEELGIKRYL 1644
MWV++L SK E A +A+ EA+ KL+ R+D GGEF + EF SYC + GI+R+
Sbjct: 735 MWVMVLGSKGEAADAIRHAQAAAEAECGRKLRVLRTDNGGEFTAAEFASYCADEGIQRHY 794
Query: 1645 TASYSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPTQSLEGMT 1824
TA YSPQQNGVVERRNQTV+GMAR+LLK + +PA++WGEAV TA Y+LNR+PT++L+G T
Sbjct: 795 TAPYSPQQNGVVERRNQTVVGMARALLKQRGMPAIFWGEAVVTAAYILNRSPTKALDGRT 854
Query: 1825 PYQAWMGRKPNVQHLRVLVAWHMSK**THTLKKSNRSVPMVLFGYEPGSKAYRVYDSNQK 2004
PY+AW GRKP V HLRV +K H K +RS P V GY GSKAYR+ D +
Sbjct: 855 PYEAWHGRKPAVSHLRVFGCLAFAKELGHIGKLDDRSTPGVFIGYAEGSKAYRILDPETQ 914
Query: 2005 KLHMSRDIIFDEDREW 2052
++ ++RD++FDE R W
Sbjct: 915 RVRITRDVVFDEGRGW 930
Score = 242 bits (617), Expect(3) = e-144
Identities = 158/413 (38%), Positives = 219/413 (53%), Gaps = 21/413 (5%)
Frame = +3
Query: 108 ESVDEFAVQLNTVVSKMRAMGEKM--DDTAVVKVLQAVTPKFLQIASILEQFGDLRKMTA 281
E VD+FA++LNT++ KM G+ ++ AV K+ + V K+ QIA +E DL M+
Sbjct: 279 EDVDDFALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYRQIARSIESLLDLSTMSI 338
Query: 282 EEVFGRLKAHEQLRGFGD---------TEGEHMLLI*GEWEXXXXXXXXXXHDSGWKERD 434
EE GRLK + GD T G + L +WE G +
Sbjct: 339 EEALGRLKVVD-----GDEPRPLSGPITIGGKLHLTREQWEA----------SQGDGRKG 383
Query: 435 EGSDCXXXXXXXXXXXXXXXXXDERYNDSGKKY---------HKFDKAKIRCYNCQNYGH 587
E S R + G + HK + C NC GH
Sbjct: 384 ESSSPTGGRKPRKARGGVQLRWARRRAEGGARRGAQGVATGNHKPARDDT-CRNCGKLGH 442
Query: 588 FASECRKPKKEERAHFAEKQHDDEPTLLLTEGCESLYTAQGEREKMMFYEE-KVKPRRSS 764
+A +CR+P++ + AH A + ++EP LLL L A + +E KV
Sbjct: 443 WAKDCRQPRRGQ-AHVARVE-EEEPALLLAHASIELPPAAPAAAAFLHLDEPKVLVSLCD 500
Query: 765 EEVVFETDIWYLDTGASNHMTGCRKKFSDLNEKVCGRVKFSDGSVVEIKRRGTVMLQYQN 944
+ D WYLDTGA++HMTG R+ F++ + V G VKF D S VEIK G+V ++
Sbjct: 501 GSSNDKADGWYLDTGATHHMTGRREFFTEFDSSVRGTVKFGDASGVEIKGVGSVTFTAKS 560
Query: 945 GEHRLLTNVYYIPKLCSSIMSLGQLDESGCNIVMERGHLHIYDRSGKLLANVRKSENRLY 1124
GEHRLLT VYYIP L +SI+S+GQLDE+G +++E G + I+DR +LLA V + NRLY
Sbjct: 561 GEHRLLTGVYYIPALRNSIISVGQLDENGSRVLVEDGLMRIWDRRRRLLAKVTRGTNRLY 620
Query: 1125 ILNLKVAHPVCLMGSLGDNAWRWHARYGHLNFPALRKLVQKEMVIGMPVVEHV 1283
IL+ +VAHPVCL D AW+WH R+GHL+F AL++L KEMV GMP ++HV
Sbjct: 621 ILSAQVAHPVCLAARRDDEAWQWHERFGHLHFEALKQLSAKEMVRGMPCLDHV 673
Score = 30.8 bits (68), Expect(3) = e-144
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 2 AKDGWAVLKSMYVGADRVTRAKLQTLKTEFEAL 100
AK+ W + + +G+DR ++ LQ L+ E+E L
Sbjct: 241 AKEAWDAIAAARIGSDRARKSTLQALRKEWENL 273
Score = 209 bits (533), Expect(5) = 4e-89
Identities = 103/188 (54%), Positives = 137/188 (72%), Gaps = 1/188 (0%)
Frame = +2
Query: 2492 DLPKGHRTISLKWVYKVKKNPKGDVIKHKARLVAKGYVQKQGVDFNEVFVPVARLETVRM 2671
DLP+GHR I+LKWV+K+K++ G ++KHKARLVA+G+VQ++G+D+++ F PVAR+E+VR
Sbjct: 1119 DLPRGHRAITLKWVFKLKRDEAGAIVKHKARLVARGFVQQEGIDYDDAFAPVARMESVR- 1177
Query: 2672 LIALAVQEDGEVHHMDVKSTFLNGELEEEVYVAQPKGFV-EGHEEKVLRLKKALYGLRQV 2848
L+ALA QE VHHMDVKS FLNG+L+EEVYV QP GFV G E KVLRL KALYGLRQ
Sbjct: 1178 LLALAAQEGWGVHHMDVKSAFLNGDLKEEVYVHQPPGFVIPGKEGKVLRLHKALYGLRQA 1237
Query: 2849 PHAWNSKLDKCLQSLGFERCPLKHAVYKKRXXXXXXXXXXXXXXXXITGSNVKDIVQFKE 3028
P AWN+KLD L+ +GFE+ P + A+Y++ ITG+ ++ FKE
Sbjct: 1238 PRAWNAKLDSTLKGMGFEQSPHEAAIYRRGNGGNALLVGVYVDDLVITGTKDAEVAAFKE 1297
Query: 3029 QMKRLFEM 3052
+MK F+M
Sbjct: 1298 EMKATFQM 1305
Score = 83.2 bits (204), Expect(5) = 4e-89
Identities = 41/79 (51%), Positives = 52/79 (65%)
Frame = +1
Query: 3082 IEVRQEPNAITISQSGYAMKILEKLKLADCNHCQVPMELRMKLSETDANPPVDTFMYRSV 3261
IEV Q+ + IT+ Q+ YA +++E L DCN PME R+KLS VD YR +
Sbjct: 1317 IEVHQDNSGITLRQTAYAKRVVELAGLTDCNPALTPMEERLKLSRDSTAEEVDATQYRRL 1376
Query: 3262 VGSLRYLVNTRPDLAYSVG 3318
VGSLRYL +TRPDLA+SVG
Sbjct: 1377 VGSLRYLTHTRPDLAFSVG 1395
Score = 67.4 bits (163), Expect(5) = 4e-89
Identities = 33/76 (43%), Positives = 48/76 (63%)
Frame = +3
Query: 3363 AVKQILWYV*GTINHGCVYPRRKESEAGLIGHSDSDLAEDVDDHKSTTGVIYFLGESPIT 3542
AVK+I+ YV GT++HG YPR +A +G+SDSD A D+D KST+G+++FLGE ++
Sbjct: 1397 AVKRIIRYVAGTLDHGLYYPRCP-GKAHFVGYSDSDHAGDIDTSKSTSGILFFLGECLVS 1455
Query: 3543 WXXXXXXXXXXXXCES 3590
W CE+
Sbjct: 1456 WQSIKQQVVALSSCEA 1471
Score = 37.7 bits (86), Expect(5) = 4e-89
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Frame = +3
Query: 2241 ELTTTLLHNEGTPDFSTSSEKPLRYHSLQEIYDET-------REVEGEAALCFLSVEEPT 2399
E T L H+ D E+ LRY +++++ + R +E + L EP
Sbjct: 1030 EFVTPLSHDGERIDAYHDGEQ-LRYRTMEDLLGDQPVPGLVPRNLEAQLHLA-CDDGEPR 1087
Query: 2400 TFEEANDSYCWKKAMAEEIAAIQRNHTCELEIFRKG 2507
+F EA W+ AM E+ A+Q N T EL +G
Sbjct: 1088 SFAEAEKHAAWRAAMQSEMDAVQENRTWELADLPRG 1123
Score = 24.6 bits (52), Expect(5) = 4e-89
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 3587 EYVAATAVACQGVWLGR 3637
EY+AA+A + Q +WL R
Sbjct: 1472 EYMAASAASTQALWLAR 1488
>gb|AAG60200.1|AC084763_20 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1611
Score = 291 bits (745), Expect(3) = e-143
Identities = 139/256 (54%), Positives = 181/256 (70%)
Frame = +1
Query: 1285 QIHDGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLLVDDHSRY 1464
Q+ D C++ K PF T+FRA + L LVHG+LCG +TPATP +YF+LLVDD SRY
Sbjct: 685 QLCDVCVVTKQRRLPFPQQTSFRAKERLGLVHGDLCGPVTPATPGGRRYFLLLVDDLSRY 744
Query: 1465 MWVVMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEELGIKRYL 1644
MWV++L SK E A +A+ EA+ KL+ R+D GGEF + EF SYC + GI+R+
Sbjct: 745 MWVMVLGSKGEAADAIRHAQAAAEAECGRKLRVLRTDNGGEFTAAEFASYCADEGIQRHY 804
Query: 1645 TASYSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPTQSLEGMT 1824
TA YSPQQNGVVERRNQTV+GMAR+LLK + +PA++WGEAV TA Y+LNR+PT++L+G T
Sbjct: 805 TAPYSPQQNGVVERRNQTVVGMARALLKQRGMPAIFWGEAVVTAAYILNRSPTKALDGRT 864
Query: 1825 PYQAWMGRKPNVQHLRVLVAWHMSK**THTLKKSNRSVPMVLFGYEPGSKAYRVYDSNQK 2004
PY+AW GRKP V HLRV +K H K +RS P V GY GSKAYR+ D +
Sbjct: 865 PYEAWHGRKPAVSHLRVFGCLAFAKELGHIGKLDDRSTPGVFIGYAEGSKAYRILDPETQ 924
Query: 2005 KLHMSRDIIFDEDREW 2052
++ ++RD++FDE R W
Sbjct: 925 RVRITRDVVFDEGRGW 940
Score = 240 bits (613), Expect(3) = e-143
Identities = 155/412 (37%), Positives = 215/412 (52%), Gaps = 20/412 (4%)
Frame = +3
Query: 108 ESVDEFAVQLNTVVSKMRAMGEKM--DDTAVVKVLQAVTPKFLQIASILEQFGDLRKMTA 281
E VD+FA++LNT++ KM G+ ++ AV K+ + V K+ QIA +E DL M+
Sbjct: 289 EDVDDFALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYRQIARSIESLLDLSTMSI 348
Query: 282 EEVFGRLKAHEQLRGFGD---------TEGEHMLLI*GEWEXXXXXXXXXXHDSGWKERD 434
EE GRLK + GD T G + L +WE G +
Sbjct: 349 EEALGRLKVVD-----GDEPRPLSGPITIGGKLHLTREQWEA----------SQGDGRKG 393
Query: 435 EGSDCXXXXXXXXXXXXXXXXXDERYNDSGKKY---------HKFDKAKIRCYNCQNYGH 587
E S R + G + HK + C NC GH
Sbjct: 394 ESSSPTGGRKPRKARGGVQLRWARRRAEGGARRGAQGVATGNHKPARDDT-CRNCGKLGH 452
Query: 588 FASECRKPKKEERAHFAEKQHDDEPTLLLTEGCESLYTAQGEREKMMFYEEKVKPRRSSE 767
+A +CR+P++ + AH A + ++ LL E A + E KV
Sbjct: 453 WAKDCRQPRRGQ-AHVARVEEEESALLLAHASIELPPAAPAAAAFLHLDEPKVLVSLCDG 511
Query: 768 EVVFETDIWYLDTGASNHMTGCRKKFSDLNEKVCGRVKFSDGSVVEIKRRGTVMLQYQNG 947
+ D WYLDTGA++HMTG R+ F++ + V G VKF D S VEIK G+V ++G
Sbjct: 512 SSNDKADGWYLDTGATHHMTGRREFFTEFDSSVRGTVKFGDASGVEIKGVGSVTFTAKSG 571
Query: 948 EHRLLTNVYYIPKLCSSIMSLGQLDESGCNIVMERGHLHIYDRSGKLLANVRKSENRLYI 1127
EHRLLT VYYIP L +SI+S+GQLDE+G +++E G + I+DR +LLA V + NRLYI
Sbjct: 572 EHRLLTGVYYIPALRNSIISVGQLDENGSRVLVEDGLMRIWDRRRRLLAKVTRGTNRLYI 631
Query: 1128 LNLKVAHPVCLMGSLGDNAWRWHARYGHLNFPALRKLVQKEMVIGMPVVEHV 1283
L+ +VAHPVCL D AW+WH R+GHL+F AL++L KEMV GMP ++HV
Sbjct: 632 LSAQVAHPVCLAARRDDEAWQWHERFGHLHFEALKQLSAKEMVRGMPCLDHV 683
Score = 30.8 bits (68), Expect(3) = e-143
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 2 AKDGWAVLKSMYVGADRVTRAKLQTLKTEFEAL 100
AK+ W + + +G+DR ++ LQ L+ E+E L
Sbjct: 251 AKEAWDAIAAARIGSDRARKSTLQALRKEWENL 283
Score = 215 bits (547), Expect(5) = 8e-96
Identities = 103/188 (54%), Positives = 138/188 (73%), Gaps = 1/188 (0%)
Frame = +2
Query: 2492 DLPKGHRTISLKWVYKVKKNPKGDVIKHKARLVAKGYVQKQGVDFNEVFVPVARLETVRM 2671
DLP+GHR I+LKWV+K+K++ G ++KHKARLVA+G+VQ++G+D+++ F PVAR+E+VR+
Sbjct: 1129 DLPRGHRAITLKWVFKLKRDEAGAIVKHKARLVARGFVQQEGIDYDDAFAPVARMESVRL 1188
Query: 2672 LIALAVQEDGEVHHMDVKSTFLNGELEEEVYVAQPKGFV-EGHEEKVLRLKKALYGLRQV 2848
L+ALA QE VHHMDVKS FLNG+L+EEVYV QP GFV G E KVLRL KALYGLRQ
Sbjct: 1189 LLALAAQEGWGVHHMDVKSAFLNGDLKEEVYVHQPPGFVIPGKEGKVLRLHKALYGLRQA 1248
Query: 2849 PHAWNSKLDKCLQSLGFERCPLKHAVYKKRXXXXXXXXXXXXXXXXITGSNVKDIVQFKE 3028
P AWN+KLD L+ +GFE+ P + A+Y++ ITG+ ++ FKE
Sbjct: 1249 PRAWNAKLDSTLKGMGFEQSPHEAAIYRRGNGGNALLVGVYVDDLVITGTKDAEVAAFKE 1308
Query: 3029 QMKRLFEM 3052
+MK F+M
Sbjct: 1309 EMKATFQM 1316
Score = 97.8 bits (242), Expect(5) = 8e-96
Identities = 48/90 (53%), Positives = 61/90 (67%)
Frame = +1
Query: 3082 IEVRQEPNAITISQSGYAMKILEKLKLADCNHCQVPMELRMKLSETDANPPVDTFMYRSV 3261
IEV Q+ + IT+ Q+ YA +++E L DCN PME R+KLS VD YR +
Sbjct: 1328 IEVHQDNSGITLRQTAYAKRVVELAGLTDCNPALTPMEERLKLSRDSTAEEVDATQYRRL 1387
Query: 3262 VGSLRYLVNTRPDLAYSVGVVSRYMEAPTT 3351
VGSLRYL +TRPDLA+SVG VSR+M+ PTT
Sbjct: 1388 VGSLRYLTHTRPDLAFSVGYVSRFMQRPTT 1417
Score = 70.1 bits (170), Expect(5) = 8e-96
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = +3
Query: 3354 HMAAVKQILWYV*GTINHGCVYPRRKESEAGLIGHSDSDLAEDVDDHKSTTGVIYFLGES 3533
H AVK+I+ YV GT++HG YPR +A +G+SDSD A D+D KST+G+++FLGE
Sbjct: 1419 HQQAVKRIIRYVAGTLDHGLYYPRCP-GKAHFVGYSDSDHAGDIDTSKSTSGILFFLGEC 1477
Query: 3534 PITWXXXXXXXXXXXXCES 3590
++W CE+
Sbjct: 1478 LVSWQSIKQQVVALSSCEA 1496
Score = 37.7 bits (86), Expect(5) = 8e-96
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Frame = +3
Query: 2241 ELTTTLLHNEGTPDFSTSSEKPLRYHSLQEIYDET-------REVEGEAALCFLSVEEPT 2399
E T L H+ D E+ LRY +++++ + R +E + L EP
Sbjct: 1040 EFVTPLSHDGERIDAYHDGEQ-LRYRTMEDLLGDQPVPGLVPRNLEAQLHLA-CDDGEPR 1097
Query: 2400 TFEEANDSYCWKKAMAEEIAAIQRNHTCELEIFRKG 2507
+F EA W+ AM E+ A+Q N T EL +G
Sbjct: 1098 SFAEAEKHAAWRAAMQSEMDAVQENRTWELADLPRG 1133
Score = 24.6 bits (52), Expect(5) = 8e-96
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 3587 EYVAATAVACQGVWLGR 3637
EY+AA+A + Q +WL R
Sbjct: 1497 EYMAASAASTQALWLAR 1513
>ref|XP_010239308.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Brachypodium distachyon]
Length = 780
Score = 310 bits (794), Expect(2) = e-143
Identities = 179/419 (42%), Positives = 259/419 (61%), Gaps = 12/419 (2%)
Frame = +3
Query: 63 RNYRPSRRSSRLSVCESVDEFAVQLNTVVSKMRAMGEKMDDTAVVK-VLQAVTPKFLQIA 239
RNY S ++ E+VD FA ++ T+V+ +R +GE + + +VV+ L+ +PK++QI
Sbjct: 118 RNYE----SLKMGEDEAVDVFAARVTTLVNGIRDLGETLIEISVVRRFLRTASPKYIQIV 173
Query: 240 SILEQFGDLRKMTAEEVFGRLKAH-EQLRG-FGD-TEGEHMLLI*GEWEXXXXXXXXXXH 410
+ +EQ DL+ +T E++ G KAH E+LR FGD + EH+++ +W
Sbjct: 174 TSIEQCVDLKTLTVEDLVGCYKAHDERLRMVFGDGKDDEHLMMTRAQWSAMAARKTGDSS 233
Query: 411 DSGWKERDEGSDCXXXXXXXXXXXXXXXXXDERYNDSGKKYHKFDKAKIRCYNCQNYGHF 590
S + RD+ E + KK K D+ K++C+NC YGHF
Sbjct: 234 SSSGR-RDQAKG------EGRAQAKKAPQGTEEKGAAPKK--KIDRKKVKCHNCGIYGHF 284
Query: 591 ASECRKPKKEERAHFAEKQHDDEPTLLLTEGCESLYTAQGEREKMMFYEEKVKPRRSSEE 770
SECRKP+KE+ + ++ DD+P LL+ E CE + Q EK++ EEK + E+
Sbjct: 285 KSECRKPQKEKA--YMAREEDDDPALLMVEMCELMEKGQ---EKVI--EEKSETVTLVEK 337
Query: 771 VVFETD--------IWYLDTGASNHMTGCRKKFSDLNEKVCGRVKFSDGSVVEIKRRGTV 926
V+ D +WYLDTGASNHMTG + +F++ N + V+F DGS V I+ RGTV
Sbjct: 338 KVYLHDKARVKAGNVWYLDTGASNHMTGDKTQFAEFNLAMGSSVRFGDGSTVAIQGRGTV 397
Query: 927 MLQYQNGEHRLLTNVYYIPKLCSSIMSLGQLDESGCNIVMERGHLHIYDRSGKLLANVRK 1106
+ + + G+H++LTNVYYIPKL S+I+SLGQL+E GC IV+E G+L YDR KLL V++
Sbjct: 398 LFETRFGDHKVLTNVYYIPKLKSNIISLGQLEERGCKIVLEDGYLWGYDRQRKLLMKVKR 457
Query: 1107 SENRLYILNLKVAHPVCLMGSLGDNAWRWHARYGHLNFPALRKLVQKEMVIGMPVVEHV 1283
++NRLYIL+L P+CL+ L D AWRWHARYGHLNF +LR+L QK+MV+GMP V+HV
Sbjct: 458 AKNRLYILDLDRTEPICLLAGLDDPAWRWHARYGHLNFHSLRQLGQKDMVVGMPTVDHV 516
Score = 229 bits (585), Expect(2) = e-143
Identities = 107/175 (61%), Positives = 137/175 (78%)
Frame = +1
Query: 1285 QIHDGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLLVDDHSRY 1464
Q+ DGC++GK APF +RA+K L L HG+LCG ++PATPA N+YF+L+VDD+SRY
Sbjct: 518 QVCDGCLVGKQRRAPFPIEAKYRAEKVLDLFHGDLCGPVSPATPAGNRYFLLVVDDYSRY 577
Query: 1465 MWVVMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEELGIKRYL 1644
MWVV+LK+K + F AF K K + E +AE KLKAFR+DRGGEFIS EF +YCEE GIKR+L
Sbjct: 578 MWVVLLKTKDQAFQAFKKIKIAAEVEAEAKLKAFRTDRGGEFISHEFAAYCEEHGIKRFL 637
Query: 1645 TASYSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPTQS 1809
TA Y+PQQN VV+RRNQTV+ MARS++KSK +P +WGEAV TAV + +A T +
Sbjct: 638 TAPYTPQQNDVVKRRNQTVVAMARSMMKSKGLPRRFWGEAVTTAVITMEKATTMT 692
>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
Length = 1427
Score = 276 bits (707), Expect(3) = e-142
Identities = 135/257 (52%), Positives = 179/257 (69%), Gaps = 1/257 (0%)
Frame = +1
Query: 1285 QIHDGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLLVDDHSRY 1464
Q+ C++ K PF + NFRA++PL L+H +LCG ITP T A N+YFML+VDD SR+
Sbjct: 527 QLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFMLIVDDFSRW 586
Query: 1465 MWVVMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEELGIKRYL 1644
MW+ ++K+K + AF KFK E A ++K RSDRGGEF+S EF CE+ GI+R+L
Sbjct: 587 MWMFVIKTKDQALEAFTKFKPLAENTAGRRIKTLRSDRGGEFLSGEFAQLCEQAGIQRHL 646
Query: 1645 TASYSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPTQSLEGMT 1824
TA YSPQQNGVVERRN++V+ MARSL+K VP +WGEAVR AVYLLNR PT+++ T
Sbjct: 647 TAPYSPQQNGVVERRNRSVMAMARSLMKGMSVPGRFWGEAVRHAVYLLNRLPTKAMGDRT 706
Query: 1825 PYQAWMGRKPNVQHLRVLVAWHMSK**THTLKK-SNRSVPMVLFGYEPGSKAYRVYDSNQ 2001
P++AW GRKP + HLRV +K T KK +RS P V G E GSKA+R++D
Sbjct: 707 PFEAWTGRKPQLGHLRVFGCIAHAKITTPNQKKLDDRSAPYVYLGVEEGSKAHRLFDPRC 766
Query: 2002 KKLHMSRDIIFDEDREW 2052
++H+SRD+IF+E+ W
Sbjct: 767 GRIHVSRDVIFEENVPW 783
Score = 238 bits (606), Expect(3) = e-142
Identities = 145/406 (35%), Positives = 221/406 (54%), Gaps = 15/406 (3%)
Frame = +3
Query: 108 ESVDEFAVQLNTVVSKMRAMGEKMDDTAVVKVLQAVTP-KFLQIASILEQFGDLRKMTAE 284
E++D++A ++ + + A+G + D+A+VK L P KF+ + + +EQF ++ M E
Sbjct: 127 ETLDQYAGRITAMSVRHSALGSTLSDSAMVKKLFDTVPEKFISLVAGIEQFYEIDNMPFE 186
Query: 285 EVFGRLKAHEQ------LRGFGDTEGEHMLLI*GEWEXXXXXXXXXXHDSGWKER---DE 437
E GRLKA+E+ G T +LL EWE S K + D
Sbjct: 187 EAVGRLKAYEERVRKKKAAAGGVTADGQVLLTQAEWEARFRKDGSES-SSPQKNKPPSDG 245
Query: 438 GSDCXXXXXXXXXXXXXXXXXDERYNDS--GKKYHKFDKAKIRCYNCQNYGHFASECRKP 611
G+ N G DK+ I+CYNC+ +GH++++C P
Sbjct: 246 GNRAQGGRGRGRGRGGGGGRSSAPRNSGAGGSGGGGRDKSHIKCYNCEEFGHYSTQCPHP 305
Query: 612 KKEE-RAHFAEKQHDDEPTLLLTEGCESLYTAQGEREKMMFYEEKVKPRRSSEEVVFET- 785
KK++ AH A+ D P LLL T ++ +EE+V P+ + T
Sbjct: 306 KKKKVEAHLAQTD-DANPALLLA------VTEDEPASGLVVHEERVWPQLLLADSGAATG 358
Query: 786 DIWYLDTGASNHMTGCRKKFSDLNEKVCGRVKFSDGSVVEIKRRGTVMLQYQNGEHRLLT 965
DIW+LD GASNHMTG R KF DL+ + G VKF D S V+I+ +G+++ +NG+ LL
Sbjct: 359 DIWFLDNGASNHMTGDRAKFRDLDVSITGSVKFGDASTVKIQGKGSILFSCKNGDQWLLQ 418
Query: 966 NVYYIPKLCSSIMSLGQLDESGCNIVMERGHLHIYDRSG-KLLANVRKSENRLYILNLKV 1142
+V+YIP LC +++SLGQL E+G +VM+ L ++D+S +L+ VR++ NRLY + LK+
Sbjct: 419 DVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVFDKSPLRLVMRVRRTPNRLYRIELKL 478
Query: 1143 AHPVCLMGSLGDNAWRWHARYGHLNFPALRKLVQKEMVIGMPVVEH 1280
A PVCL+ + + AW WHAR GH+NF A++ L K M G+P + H
Sbjct: 479 ATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGGIPAITH 524
Score = 43.9 bits (102), Expect(3) = e-142
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2
Query: 2 AKDGWAVLKSMYVGADRVTRAKLQTLKTEFEALCM 106
AK+ W LK+ +VGADRV A+LQTLK EF A+ M
Sbjct: 89 AKEVWDCLKTRFVGADRVREARLQTLKGEFGAMVM 123
Score = 232 bits (592), Expect(5) = 4e-98
Identities = 115/187 (61%), Positives = 137/187 (73%), Gaps = 1/187 (0%)
Frame = +2
Query: 2495 LPKGHRTISLKWVYKVKKNPKGDVIKHKARLVAKGYVQKQGVDFNEVFVPVARLETVRML 2674
LP GH+ I LKWVYK+KKN G+VIKHKARLVAKGYVQ+QGVDF EVF PVARL+TVR++
Sbjct: 949 LPAGHKPIGLKWVYKLKKNTAGEVIKHKARLVAKGYVQRQGVDFEEVFAPVARLDTVRVI 1008
Query: 2675 IALAVQEDGEVHHMDVKSTFLNGELEEEVYVAQPKGFVE-GHEEKVLRLKKALYGLRQVP 2851
+A+A EVHH+DVKS FLNG+LEEEVYVAQP+GFV+ G E VLRL KALYGLRQ P
Sbjct: 1009 LAIAADRRWEVHHLDVKSAFLNGDLEEEVYVAQPEGFVKRGEEHLVLRLSKALYGLRQAP 1068
Query: 2852 HAWNSKLDKCLQSLGFERCPLKHAVYKKRXXXXXXXXXXXXXXXXITGSNVKDIVQFKEQ 3031
AWN++LDKCL+ LGF RC + AVY + +TG N ++I FK+Q
Sbjct: 1069 RAWNTRLDKCLKELGFARCTQEQAVYTRGKGQAGVIVGVYVDDLIVTGENPQEIAMFKQQ 1128
Query: 3032 MKRLFEM 3052
M FEM
Sbjct: 1129 MMGEFEM 1135
Score = 92.8 bits (229), Expect(5) = 4e-98
Identities = 46/91 (50%), Positives = 59/91 (64%)
Frame = +1
Query: 3082 IEVRQEPNAITISQSGYAMKILEKLKLADCNHCQVPMELRMKLSETDANPPVDTFMYRSV 3261
IEV Q N I I Q+ YA KIL + + CN +PME R L + P+D YR V
Sbjct: 1147 IEVIQGENGIAIKQAAYAKKILSQFGMQGCNPTSIPMEPRSLLHKDADGNPIDATEYRRV 1206
Query: 3262 VGSLRYLVNTRPDLAYSVGVVSRYMEAPTTL 3354
+G LRYL++TRPDL+Y+VGV SR+ME PTT+
Sbjct: 1207 IGCLRYLLHTRPDLSYAVGVASRFMERPTTM 1237
Score = 54.3 bits (129), Expect(5) = 4e-98
Identities = 28/79 (35%), Positives = 44/79 (55%)
Frame = +3
Query: 3354 HMAAVKQILWYV*GTINHGCVYPRRKESEAGLIGHSDSDLAEDVDDHKSTTGVIYFLGES 3533
H+ AVK IL Y+ GT++ G V+ S + G +DSDLA D+DD +ST G+ +++ S
Sbjct: 1238 HLKAVKMILRYLKGTLDSGLVFASGSGS-LDITGFTDSDLAGDMDDRRSTGGMAFYVNSS 1296
Query: 3534 PITWXXXXXXXXXXXXCES 3590
++W CE+
Sbjct: 1297 LVSWCSQKQKTVALSSCEA 1315
Score = 47.8 bits (112), Expect(5) = 4e-98
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Frame = +3
Query: 2292 SSEKPLRYHSLQEIYDETREVE-------GEAALCFLSVEEPTTFEEANDSYCWKKAMAE 2450
S E P+R+ SL++I E V+ G+A L +EEP+++ EA W+ AMA+
Sbjct: 876 SDEGPVRFRSLEDIMREAPRVDLVEDEHDGDALLA--EMEEPSSYREAAGQPAWENAMAQ 933
Query: 2451 EIAAIQRNHTCELEIFRKG 2507
E+ AI++N T L G
Sbjct: 934 ELQAIEKNSTWALTALPAG 952
Score = 25.8 bits (55), Expect(5) = 4e-98
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 3587 EYVAATAVACQGVWL 3631
E++AATA AC +WL
Sbjct: 1316 EFMAATAAACHALWL 1330
>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1427
Score = 276 bits (707), Expect(3) = e-142
Identities = 135/257 (52%), Positives = 179/257 (69%), Gaps = 1/257 (0%)
Frame = +1
Query: 1285 QIHDGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLLVDDHSRY 1464
Q+ C++ K PF + NFRA++PL L+H +LCG ITP T A N+YFML+VDD SR+
Sbjct: 527 QLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFMLIVDDFSRW 586
Query: 1465 MWVVMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEELGIKRYL 1644
MW+ ++K+K + AF KFK E A ++K RSDRGGEF+S EF CE+ GI+R+L
Sbjct: 587 MWMFVIKTKDQALEAFTKFKPLAENTAGRRIKTLRSDRGGEFLSGEFAQLCEQAGIQRHL 646
Query: 1645 TASYSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPTQSLEGMT 1824
TA YSPQQNGVVERRN++V+ MARSL+K VP +WGEAVR AVYLLNR PT+++ T
Sbjct: 647 TAPYSPQQNGVVERRNRSVMAMARSLMKGMSVPGRFWGEAVRHAVYLLNRLPTKAMGDRT 706
Query: 1825 PYQAWMGRKPNVQHLRVLVAWHMSK**THTLKK-SNRSVPMVLFGYEPGSKAYRVYDSNQ 2001
P++AW GRKP + HLRV +K T KK +RS P V G E GSKA+R++D
Sbjct: 707 PFEAWTGRKPQLGHLRVFGCIAHAKITTPNQKKLDDRSAPYVYLGVEEGSKAHRLFDPRC 766
Query: 2002 KKLHMSRDIIFDEDREW 2052
++H+SRD+IF+E+ W
Sbjct: 767 GRIHVSRDVIFEENVPW 783
Score = 238 bits (606), Expect(3) = e-142
Identities = 144/406 (35%), Positives = 220/406 (54%), Gaps = 15/406 (3%)
Frame = +3
Query: 108 ESVDEFAVQLNTVVSKMRAMGEKMDDTAVVKVLQAVTP-KFLQIASILEQFGDLRKMTAE 284
E++D++A ++ + + +G + D+A+VK L P KF+ + + +EQF ++ M E
Sbjct: 127 ETLDQYAGRITAMSVRHSVLGSTLSDSAIVKKLFDTVPEKFISLVAGIEQFYEIDNMPFE 186
Query: 285 EVFGRLKAHEQ------LRGFGDTEGEHMLLI*GEWEXXXXXXXXXXHDSGWKER---DE 437
E GRLKA+E+ G T +LL EWE S K + D
Sbjct: 187 EAVGRLKAYEERVRKKKAAAGGVTADGQVLLTQAEWEARFRKDGSES-SSPQKNKPPSDR 245
Query: 438 GSDCXXXXXXXXXXXXXXXXXDERYNDS--GKKYHKFDKAKIRCYNCQNYGHFASECRKP 611
G+ N G DK+ I+CYNC+ +GH++++C P
Sbjct: 246 GNRAQGGRGRGRGHGGGGGRGSAPRNSGAGGSGGGGRDKSHIKCYNCEEFGHYSTQCPHP 305
Query: 612 KKEE-RAHFAEKQHDDEPTLLLTEGCESLYTAQGEREKMMFYEEKVKPRRSSEEVVFET- 785
KK++ AH A+ D P LLL T ++ +EE+V P+ + T
Sbjct: 306 KKKKVEAHLAQTD-DANPALLLA------VTEDEPASGLVVHEERVWPQLLLADSGAATG 358
Query: 786 DIWYLDTGASNHMTGCRKKFSDLNEKVCGRVKFSDGSVVEIKRRGTVMLQYQNGEHRLLT 965
DIW+LD GASNHMTG R KF DL+ + G VKF D S V+I+ +G+++ +NG+ LL
Sbjct: 359 DIWFLDNGASNHMTGDRAKFRDLDVSITGSVKFGDASTVKIQGKGSILFSCKNGDQWLLQ 418
Query: 966 NVYYIPKLCSSIMSLGQLDESGCNIVMERGHLHIYDRSG-KLLANVRKSENRLYILNLKV 1142
+V+YIP LC +++SLGQL E+G +VM+ L ++D+S +L+ VR++ NRLY + LK+
Sbjct: 419 DVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVFDKSPLRLVMRVRRTPNRLYRIELKL 478
Query: 1143 AHPVCLMGSLGDNAWRWHARYGHLNFPALRKLVQKEMVIGMPVVEH 1280
A PVCL+ + + AW WHAR GH+NF A++ L K M G+P + H
Sbjct: 479 ATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGGIPAITH 524
Score = 43.9 bits (102), Expect(3) = e-142
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2
Query: 2 AKDGWAVLKSMYVGADRVTRAKLQTLKTEFEALCM 106
AK+ W LK+ +VGADRV A+LQTLK EF A+ M
Sbjct: 89 AKEVWDCLKTRFVGADRVREARLQTLKGEFGAMVM 123
Score = 231 bits (590), Expect(5) = 7e-98
Identities = 115/187 (61%), Positives = 136/187 (72%), Gaps = 1/187 (0%)
Frame = +2
Query: 2495 LPKGHRTISLKWVYKVKKNPKGDVIKHKARLVAKGYVQKQGVDFNEVFVPVARLETVRML 2674
LP GH+ I LKWVYK+KKN G+VIKHKARLVAKGYVQ+QGVDF EVF PVARL+TVR++
Sbjct: 949 LPAGHKPIGLKWVYKLKKNTAGEVIKHKARLVAKGYVQRQGVDFEEVFAPVARLDTVRVI 1008
Query: 2675 IALAVQEDGEVHHMDVKSTFLNGELEEEVYVAQPKGFVE-GHEEKVLRLKKALYGLRQVP 2851
+A+A EVHH+DVKS FLNG+LEEEVYVAQP+GFV+ G E VLRL KALYGLRQ P
Sbjct: 1009 LAIAADRRWEVHHLDVKSAFLNGDLEEEVYVAQPEGFVKRGEEHLVLRLSKALYGLRQAP 1068
Query: 2852 HAWNSKLDKCLQSLGFERCPLKHAVYKKRXXXXXXXXXXXXXXXXITGSNVKDIVQFKEQ 3031
AWN++LDKCL+ LGF RC + AVY + +TG N +I FK+Q
Sbjct: 1069 RAWNTRLDKCLKELGFARCTQEQAVYTRGKGQAGVIVGVYVDDLIVTGENPHEIAMFKQQ 1128
Query: 3032 MKRLFEM 3052
M FEM
Sbjct: 1129 MMGEFEM 1135
Score = 92.8 bits (229), Expect(5) = 7e-98
Identities = 46/91 (50%), Positives = 59/91 (64%)
Frame = +1
Query: 3082 IEVRQEPNAITISQSGYAMKILEKLKLADCNHCQVPMELRMKLSETDANPPVDTFMYRSV 3261
IEV Q N I I Q+ YA KIL + + CN +PME R L + P+D YR V
Sbjct: 1147 IEVIQGENGIAIKQAAYAKKILSQFGMQGCNPTSIPMEPRSLLHKDADGNPIDATEYRRV 1206
Query: 3262 VGSLRYLVNTRPDLAYSVGVVSRYMEAPTTL 3354
+G LRYL++TRPDL+Y+VGV SR+ME PTT+
Sbjct: 1207 IGCLRYLLHTRPDLSYAVGVASRFMERPTTM 1237
Score = 54.3 bits (129), Expect(5) = 7e-98
Identities = 28/79 (35%), Positives = 44/79 (55%)
Frame = +3
Query: 3354 HMAAVKQILWYV*GTINHGCVYPRRKESEAGLIGHSDSDLAEDVDDHKSTTGVIYFLGES 3533
H+ AVK IL Y+ GT++ G V+ S + G +DSDLA D+DD +ST G+ +++ S
Sbjct: 1238 HLKAVKMILRYLKGTLDSGLVFASGSGS-LDITGFTDSDLAGDMDDRRSTGGMAFYVNSS 1296
Query: 3534 PITWXXXXXXXXXXXXCES 3590
++W CE+
Sbjct: 1297 LVSWCSQKQKTVALSSCEA 1315
Score = 47.8 bits (112), Expect(5) = 7e-98
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Frame = +3
Query: 2292 SSEKPLRYHSLQEIYDETREVE-------GEAALCFLSVEEPTTFEEANDSYCWKKAMAE 2450
S E P+R+ SL++I E V+ G+A L +EEP+++ EA W+ AMA+
Sbjct: 876 SDEGPVRFRSLEDIMREAPRVDLVEDEHDGDALLA--EMEEPSSYREAAGQPAWENAMAQ 933
Query: 2451 EIAAIQRNHTCELEIFRKG 2507
E+ AI++N T L G
Sbjct: 934 ELQAIEKNSTWALTALPAG 952
Score = 25.8 bits (55), Expect(5) = 7e-98
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 3587 EYVAATAVACQGVWL 3631
E++AATA AC +WL
Sbjct: 1316 EFMAATAAACHALWL 1330
>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108710383|gb|ABF98178.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1339
Score = 263 bits (673), Expect(3) = e-142
Identities = 128/257 (49%), Positives = 172/257 (66%), Gaps = 1/257 (0%)
Frame = +1
Query: 1285 QIHDGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLLVDDHSRY 1464
Q+ C++ K PF N+ A+ PL L+H +LCG ITP+T N+YFML+VDD S +
Sbjct: 480 QLCQACLVAKQVRQPFPGMANYLAEAPLELLHMDLCGPITPSTFTGNRYFMLIVDDFSHW 539
Query: 1465 MWVVMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEELGIKRYL 1644
MWV ++KSK + AF KFK E A +K R+DRGGEF+S EF C+ GI+R+L
Sbjct: 540 MWVFVIKSKDQALAAFEKFKPLAENTAGRTIKTLRTDRGGEFLSGEFARVCDAAGIERHL 599
Query: 1645 TASYSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPTQSLEGMT 1824
T YSPQQNGVVERRN+TV+ MARSLLK VP WGEAVR AV+LLNR PT+++ T
Sbjct: 600 TVPYSPQQNGVVERRNRTVMAMARSLLKGMSVPGRMWGEAVRHAVFLLNRLPTKAMGNRT 659
Query: 1825 PYQAWMGRKPNVQHLRVL-VAWHMSK**THTLKKSNRSVPMVLFGYEPGSKAYRVYDSNQ 2001
P++AW G+KP++ HLRV H H K +RS P+V G E GSKA+R++D +
Sbjct: 660 PFEAWTGKKPHLGHLRVFGCTAHAKVTAPHLKKLDDRSNPVVYLGVEEGSKAHRLFDPRR 719
Query: 2002 KKLHMSRDIIFDEDREW 2052
+++ +SRD++FDE+ W
Sbjct: 720 RQIIVSRDVVFDENTPW 736
Score = 252 bits (644), Expect(3) = e-142
Identities = 153/404 (37%), Positives = 232/404 (57%), Gaps = 13/404 (3%)
Frame = +3
Query: 108 ESVDEFAVQLNTVVSKMRAMGEKMDDTAVVKVLQAVTP-KFLQIASILEQFGDLRKMTAE 284
E++D++A ++ T+ + A+G ++D A+VK L P KF+ + + +EQF D+ M E
Sbjct: 77 ETLDQYAGRITTMGVRYSALGATLNDAAMVKRLFDTVPEKFISLVAGIEQFYDVDTMPFE 136
Query: 285 EVFGRLKAHEQ------LRGFGDTEGEHMLLI*GEWEXXXXXXXXXXHDSGWKERDEGSD 446
E GRLKA+E+ G T +LL EWE S K + G
Sbjct: 137 EAVGRLKAYEERMRKKKATTGGVTADGQVLLTQAEWEARFKKGGGET-SSPQKNKPSGEG 195
Query: 447 CXXXXXXXXXXXXXXXXXDERYND-SGKKYHKFDKAKIRCYNCQNYGHFASECRKPKKEE 623
+ SG DK+ I+C+NC+ +GH++++C PKK++
Sbjct: 196 ANRGQAGRGRGRGRGRGGTQSSGGGSGGGSGGRDKSHIKCFNCEEFGHYSTQCPHPKKKK 255
Query: 624 -RAHFAEKQHDDEPTLLL--TEGCESLYTAQGEREKMMFYEEKVKPRRS-SEEVVFETDI 791
AH A+ + D PTLLL TE ++ + Q ++ +EE+V PR +E+ D+
Sbjct: 256 AEAHLAQTE-DAGPTLLLAVTEAVQNA-SRQDALCGLVVHEERVWPRLMLAEKGAAAGDL 313
Query: 792 WYLDTGASNHMTGCRKKFSDLNEKVCGRVKFSDGSVVEIKRRGTVMLQYQNGEHRLLTNV 971
WYLD GASNHM+G +KF +L+E V G+V+F D S V+I +G+++ +NG+ LL +V
Sbjct: 314 WYLDNGASNHMSGDHRKFRELDETVTGQVRFGDASSVQIMGKGSILFSCKNGDQWLLDDV 373
Query: 972 YYIPKLCSSIMSLGQLDESGCNIVMERGHLHIYDRS-GKLLANVRKSENRLYILNLKVAH 1148
YYIP L +++SLGQL E+G +VM+ L ++D++ +L+ VR+S NRLY + L++A
Sbjct: 374 YYIPSLYCNMVSLGQLTETGHRVVMDGDDLEVFDKNPWRLVMKVRRSSNRLYRIELQLAS 433
Query: 1149 PVCLMGSLGDNAWRWHARYGHLNFPALRKLVQKEMVIGMPVVEH 1280
PVCL+ SL D AW WHAR GH+NF AL+ LV KEM G+P V H
Sbjct: 434 PVCLLASLDDPAWLWHARLGHVNFHALKLLVDKEMAAGVPAVHH 477
Score = 41.2 bits (95), Expect(3) = e-142
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +2
Query: 2 AKDGWAVLKSMYVGADRVTRAKLQTLKTEFEALCM 106
AK+ W LK+ ++GADRV A+LQTLK EF + M
Sbjct: 39 AKEVWDCLKTRFIGADRVRDARLQTLKEEFTNMVM 73
Score = 217 bits (552), Expect = 6e-53
Identities = 107/187 (57%), Positives = 133/187 (71%), Gaps = 1/187 (0%)
Frame = +2
Query: 2495 LPKGHRTISLKWVYKVKKNPKGDVIKHKARLVAKGYVQKQGVDFNEVFVPVARLETVRML 2674
LP H+ I LKWV+K+KKN G+VIKHKARLVAKGYVQ+QGVDF+EVF PVARL+TVR +
Sbjct: 904 LPASHKAIGLKWVFKLKKNTAGEVIKHKARLVAKGYVQRQGVDFDEVFAPVARLDTVRAI 963
Query: 2675 IALAVQEDGEVHHMDVKSTFLNGELEEEVYVAQPKGFVE-GHEEKVLRLKKALYGLRQVP 2851
+ +AV +VHH+DVKS FLNG+LEEEVYV+QP+GFVE G E V +L KALYGLRQ P
Sbjct: 964 LPVAVDRRWQVHHLDVKSAFLNGDLEEEVYVSQPEGFVEKGKEHLVYKLSKALYGLRQAP 1023
Query: 2852 HAWNSKLDKCLQSLGFERCPLKHAVYKKRXXXXXXXXXXXXXXXXITGSNVKDIVQFKEQ 3031
AWN++LD+ ++ LGF RC + AVY + +TG + DI FK+Q
Sbjct: 1024 RAWNTRLDRSMKELGFSRCAQEQAVYTRGTGSTGIIVGVYVDDLIVTGESPSDITAFKQQ 1083
Query: 3032 MKRLFEM 3052
M FEM
Sbjct: 1084 MMGEFEM 1090
Score = 57.4 bits (137), Expect(3) = 1e-16
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +1
Query: 3196 LRMKLSETDANPPVDTFMYRSVVGSLRYLVNTRPDLAYSVGVVSRYMEAPTTL 3354
L ++L + VD YR V+G LRYL++TRPDL+Y+VGV SR+ME PT +
Sbjct: 1100 LGIELHKDAQGSTVDPTEYRRVIGCLRYLLHTRPDLSYAVGVASRFMERPTVM 1152
Score = 53.5 bits (127), Expect(3) = 1e-16
Identities = 29/79 (36%), Positives = 43/79 (54%)
Frame = +3
Query: 3354 HMAAVKQILWYV*GTINHGCVYPRRKESEAGLIGHSDSDLAEDVDDHKSTTGVIYFLGES 3533
H AVKQIL Y+ GTIN G ++ + + G +DSDLA D DD +ST+G+ ++ S
Sbjct: 1153 HFKAVKQILRYLKGTINCGLMFSGGNGA-VEITGFTDSDLAGDSDDRRSTSGMAFYFNGS 1211
Query: 3534 PITWXXXXXXXXXXXXCES 3590
++W CE+
Sbjct: 1212 LVSWSSQKQKTVALSSCEA 1230
Score = 25.8 bits (55), Expect(3) = 1e-16
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 3587 EYVAATAVACQGVWL 3631
E++AATA AC +WL
Sbjct: 1231 EFMAATAAACHALWL 1245
>gb|ADB85424.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1946
Score = 271 bits (692), Expect(3) = e-141
Identities = 133/256 (51%), Positives = 171/256 (66%)
Frame = +1
Query: 1285 QIHDGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLLVDDHSRY 1464
Q D C++ K PF +FRA + L LVHG+LCG +TPATP +YF LLVDD SRY
Sbjct: 1033 QFCDTCVLTKLRRLPFPRQASFRAKEKLELVHGDLCGPVTPATPGGRRYF-LLVDDVSRY 1091
Query: 1465 MWVVMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEELGIKRYL 1644
MW V+L K+ A +A+ EA+ KL+ R+D GGEF + EF +YC GI R+
Sbjct: 1092 MWAVLLDVKASAADAIKCLQATAEAECGRKLRVLRTDNGGEFTAAEFAAYCANEGIHRHF 1151
Query: 1645 TASYSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPTQSLEGMT 1824
+A Y+PQQNGVVERRNQTV+ AR+LLK + +PA YWGEAV TAV+LLNR+PT++L+G T
Sbjct: 1152 SAPYTPQQNGVVERRNQTVVATARALLKQRGMPAFYWGEAVMTAVHLLNRSPTKALDGKT 1211
Query: 1825 PYQAWMGRKPNVQHLRVLVAWHMSK**THTLKKSNRSVPMVLFGYEPGSKAYRVYDSNQK 2004
PY+AW GRKP V HLRV K H K +RS P V GY G+KAYRV D +
Sbjct: 1212 PYEAWHGRKPAVSHLRVFGCLAFVKELNHVGKLDDRSTPGVFIGYAEGAKAYRVLDPTTR 1271
Query: 2005 KLHMSRDIIFDEDREW 2052
++ ++RD++FDE R W
Sbjct: 1272 RVRITRDVVFDEGRGW 1287
Score = 254 bits (650), Expect(3) = e-141
Identities = 159/402 (39%), Positives = 221/402 (54%), Gaps = 10/402 (2%)
Frame = +3
Query: 108 ESVDEFAVQLNTVVSKMRAMGEKM--DDTAVVKVLQAVTPKFLQIASILEQFGDLRKMTA 281
E VD+FA++LNT++ K+ G+ ++ AV K+ + V K+ Q+A +E DL MT
Sbjct: 635 EDVDDFALRLNTLLQKLVQFGDDTYGEERAVEKLFRCVPEKYKQMARSIESLLDLSTMTI 694
Query: 282 EEVFGRLK---AHEQLRGFGD-TEGEHMLLI*GEWEXXXXXXXXXXHDS---GWKERDEG 440
EE GRLK + E R G T G +LL +W S G K G
Sbjct: 695 EEALGRLKVVDSDEPQRLSGPVTIGGKLLLTREQWAAGQGDRKKGEPSSTTGGRKRGKRG 754
Query: 441 SDCXXXXXXXXXXXXXXXXXDERYNDSGKKYHKFDKAKIRCYNCQNYGHFASECRKPKKE 620
C + +GK+ D + C+NC GH+A +CR+P++
Sbjct: 755 KPCKDAQAGARGRAEGDDRGGAQGGAAGKQKPARDDS---CHNCGKPGHWARDCRQPRRG 811
Query: 621 ERAHFAEKQHDDEPTLLLTEGCESLYTAQGEREKMMFYEE-KVKPRRSSEEVVFETDIWY 797
+ AH A+ + +++P L + L A ++ +E K +TD W
Sbjct: 812 Q-AHVAQAEEEEQPALFIAHASIELPPAAPAAAALLHLDEPKAHALLGDSSGNDKTDGWC 870
Query: 798 LDTGASNHMTGCRKKFSDLNEKVCGRVKFSDGSVVEIKRRGTVMLQYQNGEHRLLTNVYY 977
LDTGA++HMTG R+ FS+L+ V G VKF D S VEIK G+V+ + GEHRLLT VYY
Sbjct: 871 LDTGATHHMTGRREFFSELDSGVRGTVKFGDASAVEIKGVGSVVFVAKTGEHRLLTGVYY 930
Query: 978 IPKLCSSIMSLGQLDESGCNIVMERGHLHIYDRSGKLLANVRKSENRLYILNLKVAHPVC 1157
IP L +SI+SLGQLDE+G + +E G L I+D S +LL V +S NRLY+L+ +VA P+C
Sbjct: 931 IPALRNSIISLGQLDENGSRVEIEHGVLRIWDHSRRLLVKVNRS-NRLYVLHAQVAQPLC 989
Query: 1158 LMGSLGDNAWRWHARYGHLNFPALRKLVQKEMVIGMPVVEHV 1283
L D+ WRWH R+GHLNF ALR+L KEMV GMP V+HV
Sbjct: 990 LAARRDDDVWRWHERFGHLNFEALRQLGSKEMVRGMPHVDHV 1031
Score = 30.8 bits (68), Expect(3) = e-141
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 2 AKDGWAVLKSMYVGADRVTRAKLQTLKTEFEAL 100
AK+ W + + +G+DR ++ LQ L+ E+E L
Sbjct: 597 AKEAWDAIAAARIGSDRARKSTLQALRKEWENL 629
Score = 214 bits (546), Expect(5) = 9e-94
Identities = 107/188 (56%), Positives = 137/188 (72%), Gaps = 1/188 (0%)
Frame = +2
Query: 2492 DLPKGHRTISLKWVYKVKKNPKGDVIKHKARLVAKGYVQKQGVDFNEVFVPVARLETVRM 2671
DLP GH ISLKWV+K+KKN G+VIKHKARLVA+G+VQ++GVDF++ F PVAR+E+VR+
Sbjct: 1479 DLPAGHHAISLKWVFKLKKNEAGEVIKHKARLVARGFVQQEGVDFDDAFAPVARMESVRL 1538
Query: 2672 LIALAVQEDGEVHHMDVKSTFLNGELEEEVYVAQPKGF-VEGHEEKVLRLKKALYGLRQV 2848
L+ALA QE VHHMDVKS FLNG+L+EEVYV QP GF + G E KVLRL+KALYGLRQ
Sbjct: 1539 LLALAAQEGWCVHHMDVKSAFLNGDLKEEVYVRQPPGFIILGKESKVLRLRKALYGLRQA 1598
Query: 2849 PHAWNSKLDKCLQSLGFERCPLKHAVYKKRXXXXXXXXXXXXXXXXITGSNVKDIVQFKE 3028
P AWN+KL+ L+ +GF++ + AVY++ ITG+ K+I FK
Sbjct: 1599 PRAWNAKLNSTLKQMGFQQSAHEAAVYRRGKGGNALLIGVYVDDLVITGTKEKEIEAFKA 1658
Query: 3029 QMKRLFEM 3052
+MK F+M
Sbjct: 1659 EMKATFQM 1666
Score = 86.7 bits (213), Expect(5) = 9e-94
Identities = 43/85 (50%), Positives = 57/85 (67%)
Frame = +1
Query: 3082 IEVRQEPNAITISQSGYAMKILEKLKLADCNHCQVPMELRMKLSETDANPPVDTFMYRSV 3261
IEV Q+ + I++ Q+ YA +I+E L DCN PME R+KLS VD YR +
Sbjct: 1678 IEVHQDSSGISLRQTAYAKRIVELGGLTDCNPTHTPMEERLKLSRESTAEEVDATQYRRI 1737
Query: 3262 VGSLRYLVNTRPDLAYSVGVVSRYM 3336
VGSLRYLV+TRPD+A++VG VSR +
Sbjct: 1738 VGSLRYLVHTRPDVAFAVGYVSRIL 1762
Score = 63.9 bits (154), Expect(5) = 9e-94
Identities = 34/75 (45%), Positives = 46/75 (61%)
Frame = +3
Query: 3366 VKQILWYV*GTINHGCVYPRRKESEAGLIGHSDSDLAEDVDDHKSTTGVIYFLGESPITW 3545
V +IL YV GT ++G YPR + A IG+SDSD A D+D KST+G++YFLG+ PI+W
Sbjct: 1758 VSRILRYVAGTSDYGLHYPRCPGA-AHFIGYSDSDHAGDIDTSKSTSGILYFLGKCPISW 1816
Query: 3546 XXXXXXXXXXXXCES 3590
CE+
Sbjct: 1817 QSVKQQVVALSSCEA 1831
Score = 47.8 bits (112), Expect(5) = 9e-94
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Frame = +3
Query: 2151 SQEPYPPWSARALVELQEATSRQP----HQQEHQ-ELTTTLLHNEGTPDFSTSSEKPLRY 2315
S P PP + R+ + P H ++H E T L ++E D E PLRY
Sbjct: 1355 SPPPAPPATPRSPTPAPTPSGSAPAASAHDEQHTVEFATPLSNDEDRIDAYHGGE-PLRY 1413
Query: 2316 HSLQEIYDET-------REVEGEAALCFLSVEEPTTFEEANDSYCWKKAMAEEIAAIQRN 2474
++ ++ E ++E E L EP +F EA + W+ AM EE+ A++RN
Sbjct: 1414 RTMDDLLGEQPVPELAQHDLEAELHLA-QDDGEPRSFAEAERNAAWRAAMQEEMDAVERN 1472
Query: 2475 HTCEL 2489
T EL
Sbjct: 1473 KTWEL 1477
Score = 25.4 bits (54), Expect(5) = 9e-94
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 3587 EYVAATAVACQGVWLGR 3637
EY+AAT + Q +WL R
Sbjct: 1832 EYIAATTASTQALWLAR 1848
>gb|ABA96719.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1795
Score = 286 bits (733), Expect(3) = e-141
Identities = 137/256 (53%), Positives = 177/256 (69%)
Frame = +1
Query: 1285 QIHDGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLLVDDHSRY 1464
Q+ D C++ K PF T+FRA K L LVH +LCG +TPATP +YF+LLVDD SRY
Sbjct: 869 QLCDVCVVTKQRRLPFPQQTSFRAKKRLELVHEDLCGPVTPATPGGRRYFLLLVDDLSRY 928
Query: 1465 MWVVMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEELGIKRYL 1644
MWV++L SK E A +A+ EA+ KL+ R+D GGEF + EF SYC + GI+R+
Sbjct: 929 MWVMVLGSKGEAADAIRHAQAAAEAECGRKLRVLRTDNGGEFTAAEFASYCADEGIQRHY 988
Query: 1645 TASYSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPTQSLEGMT 1824
T YSPQQNGVVERRNQTV+GMAR+LLK + +PA++WGE V TA Y+LNR+PT++L+G T
Sbjct: 989 TTPYSPQQNGVVERRNQTVVGMARALLKQRGMPAIFWGEVVVTAAYILNRSPTKALDGRT 1048
Query: 1825 PYQAWMGRKPNVQHLRVLVAWHMSK**THTLKKSNRSVPMVLFGYEPGSKAYRVYDSNQK 2004
PY+AW GRKP V HLRV +K H K +RS P V GY GSKAYR+ D +
Sbjct: 1049 PYEAWHGRKPAVSHLRVFGCLAFAKELGHIGKLDDRSTPGVFIGYAEGSKAYRILDPETQ 1108
Query: 2005 KLHMSRDIIFDEDREW 2052
++ +RD++FDE R W
Sbjct: 1109 RVRTARDVVFDEGRGW 1124
Score = 238 bits (608), Expect(3) = e-141
Identities = 155/408 (37%), Positives = 218/408 (53%), Gaps = 16/408 (3%)
Frame = +3
Query: 108 ESVDEFAVQLNTVVSKMRAMGEKM--DDTAVVKVLQAVTPKFLQIASILEQFGDLRKMTA 281
E VD+FA++LNT++ KM G+ ++ AV K+ + V K+ QIA +E DL M+
Sbjct: 474 EDVDDFALRLNTLLQKMVQYGDDTYDEERAVEKLFRCVPEKYRQIARSIESLLDLSTMSI 533
Query: 282 EEVFGRLKAHE----QLRGFGDTEGEHMLLI*GEWEXXXXXXXXXXHDSGWKERDEGSDC 449
EE GRLK + Q T G + L +WE G + + E S
Sbjct: 534 EEALGRLKVVDGDEPQPLSGPITIGGKLHLTREQWEA----------SQGDRRKGESSSP 583
Query: 450 XXXXXXXXXXXXXXXXXDERYNDSGKKY---------HKFDKAKIRCYNCQNYGHFASEC 602
R + G + HK + C NC GH+A +C
Sbjct: 584 TGGRKPRKARGGVQLRWARRRAEGGARRGAQGVATGNHKPARDDA-CRNCGKLGHWAKDC 642
Query: 603 RKPKKEERAHFAEKQHDDEPTLLLTEGCESLYTAQGEREKMMFYEE-KVKPRRSSEEVVF 779
++P++ + AH A + +EP LLL L A + +E KV +
Sbjct: 643 QQPRRGQ-AHVARVE--EEPALLLAHASIELPPAAPAAAAFLHLDEPKVLVSLCNGSSND 699
Query: 780 ETDIWYLDTGASNHMTGCRKKFSDLNEKVCGRVKFSDGSVVEIKRRGTVMLQYQNGEHRL 959
+ D WYLDTGA++HMTG R+ F++ + V G VKF D S VEIK G+V ++GEHRL
Sbjct: 700 KADGWYLDTGATHHMTGRREFFTEFDSSVRGSVKFGDASGVEIKGVGSVTFTAKSGEHRL 759
Query: 960 LTNVYYIPKLCSSIMSLGQLDESGCNIVMERGHLHIYDRSGKLLANVRKSENRLYILNLK 1139
LT VYYIP L +SI+S+GQLDE+G +++E G + I+DR +LLA V + NRLYIL+ +
Sbjct: 760 LTGVYYIPALRNSIISVGQLDENGSRVMVEDGLMRIWDRRRRLLAKVTRGTNRLYILSAQ 819
Query: 1140 VAHPVCLMGSLGDNAWRWHARYGHLNFPALRKLVQKEMVIGMPVVEHV 1283
VA PVCL D AW+WH R+GHL+F AL++L KEMV GMP ++HV
Sbjct: 820 VAQPVCLAARRDDEAWQWHERFGHLHFEALKQLSAKEMVRGMPCLDHV 867
Score = 30.8 bits (68), Expect(3) = e-141
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 2 AKDGWAVLKSMYVGADRVTRAKLQTLKTEFEAL 100
AK+ W + + +G+DR ++ LQ L+ E+E L
Sbjct: 436 AKEAWDAIAAARIGSDRARKSTLQALRKEWENL 468
Score = 214 bits (544), Expect(5) = 5e-95
Identities = 103/188 (54%), Positives = 138/188 (73%), Gaps = 1/188 (0%)
Frame = +2
Query: 2492 DLPKGHRTISLKWVYKVKKNPKGDVIKHKARLVAKGYVQKQGVDFNEVFVPVARLETVRM 2671
DLP+GHR I+LKWV+K+K++ G +IKHKARLVA+G+VQ++G+D+++ F PVAR+E+VR+
Sbjct: 1313 DLPRGHRAITLKWVFKLKRDEAGAIIKHKARLVARGFVQQEGIDYDDAFAPVARMESVRL 1372
Query: 2672 LIALAVQEDGEVHHMDVKSTFLNGELEEEVYVAQPKGFV-EGHEEKVLRLKKALYGLRQV 2848
L+ALA QE VHHMDVKS FLNG+L+EEVYV QP GFV G E KVLRL KALYGL+Q
Sbjct: 1373 LLALAAQEGWGVHHMDVKSAFLNGDLKEEVYVHQPPGFVIPGKEGKVLRLHKALYGLQQA 1432
Query: 2849 PHAWNSKLDKCLQSLGFERCPLKHAVYKKRXXXXXXXXXXXXXXXXITGSNVKDIVQFKE 3028
P AWN+KLD L+ +GFE+ P + A+Y++ ITG+ ++ FKE
Sbjct: 1433 PRAWNAKLDSTLKGMGFEQSPHEAAIYRRGNGGNALLVGVYVDDLVITGTKDAEVAAFKE 1492
Query: 3029 QMKRLFEM 3052
+MK F+M
Sbjct: 1493 EMKATFQM 1500
Score = 96.3 bits (238), Expect(5) = 5e-95
Identities = 47/90 (52%), Positives = 61/90 (67%)
Frame = +1
Query: 3082 IEVRQEPNAITISQSGYAMKILEKLKLADCNHCQVPMELRMKLSETDANPPVDTFMYRSV 3261
IEV ++ + IT+ Q+ YA +++E L DCN PME R+KLS VD YR +
Sbjct: 1512 IEVHKDNSGITLRQTAYAKRVVELAGLTDCNPALTPMEERLKLSRDSTAEEVDATQYRRL 1571
Query: 3262 VGSLRYLVNTRPDLAYSVGVVSRYMEAPTT 3351
VGSLRYL +TRPDLA+SVG VSR+M+ PTT
Sbjct: 1572 VGSLRYLTHTRPDLAFSVGYVSRFMQRPTT 1601
Score = 68.6 bits (166), Expect(5) = 5e-95
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = +3
Query: 3354 HMAAVKQILWYV*GTINHGCVYPRRKESEAGLIGHSDSDLAEDVDDHKSTTGVIYFLGES 3533
H AVK+I+ YV GT++HG YPR +A +G+SDSD A D+D KST+G+++FLG+
Sbjct: 1603 HQQAVKRIIRYVAGTLDHGLYYPRCP-GKAHFVGYSDSDHAGDIDTSKSTSGILFFLGKC 1661
Query: 3534 PITWXXXXXXXXXXXXCES 3590
++W CE+
Sbjct: 1662 LVSWQSVKQQVVALSSCEA 1680
Score = 39.3 bits (90), Expect(5) = 5e-95
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Frame = +3
Query: 2241 ELTTTLLHNEGTPDFSTSSEKPLRYHSLQEIYDET-------REVEGEAALCFLSVEEPT 2399
E T L H+ D E+ LRY +++++ + R++E + L EP
Sbjct: 1224 EFATPLSHDGERIDAYNDGEQ-LRYRTMEDLLGDQPVPGLVPRDLEAQLHLA-CDDGEPR 1281
Query: 2400 TFEEANDSYCWKKAMAEEIAAIQRNHTCELEIFRKG 2507
+F EA W+ AM E+ A+Q N T EL +G
Sbjct: 1282 SFAEAEKHAAWRAAMQSEMDAVQENRTWELADLPRG 1317
Score = 24.6 bits (52), Expect(5) = 5e-95
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 3587 EYVAATAVACQGVWLGR 3637
EY+AA+A + Q +WL R
Sbjct: 1681 EYMAASAASTQALWLAR 1697
>ref|NP_001064098.1| Os10g0130700 [Oryza sativa Japonica Group]
gi|20514806|gb|AAM23251.1|AC092553_17 Putative pol
polyprotein [Oryza sativa Japonica Group]
gi|21326494|gb|AAM47622.1|AC122147_11 Putative pol
polyprotein [Oryza sativa Japonica Group]
gi|31430018|gb|AAP51989.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group] gi|113638707|dbj|BAF26012.1| Os10g0130700
[Oryza sativa Japonica Group]
Length = 1426
Score = 282 bits (722), Expect(2) = e-141
Identities = 139/259 (53%), Positives = 180/259 (69%), Gaps = 1/259 (0%)
Frame = +1
Query: 1279 T*QIHDGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLLVDDHS 1458
T Q+ DGC+ GK PF FRA + L LVHG+LCG ITPATP KYF+LLVDD S
Sbjct: 547 TDQLCDGCLAGKQRRLPFPEEAKFRAQEALELVHGDLCGPITPATPGGRKYFLLLVDDMS 606
Query: 1459 RYMWVVMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEELGIKR 1638
R+MW+ +L K E A +F+ VE ++ KL+A R+DRGGEF S EF YC + G++R
Sbjct: 607 RHMWIRLLSGKHEAATAIKQFQVGVELESGRKLRALRTDRGGEFTSVEFMDYCADHGMRR 666
Query: 1639 YLTASYSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPTQSLEG 1818
LTA YSPQQNGVVERRNQTV+ ARS+LK+ +PA +WGEAV AVY+LNR+PT++L G
Sbjct: 667 ELTAPYSPQQNGVVERRNQTVVAAARSMLKAAGMPACFWGEAVVAAVYVLNRSPTKALNG 726
Query: 1819 MTPYQAWMGRKPNVQHLRVLVAWHMSK**THTLKK-SNRSVPMVLFGYEPGSKAYRVYDS 1995
+TP++AW GR+P+V+HLRV K L+K +R MV GYE GSKAYR+YD
Sbjct: 727 VTPHEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDP 786
Query: 1996 NQKKLHMSRDIIFDEDREW 2052
+++ +SRD++FDE W
Sbjct: 787 VARRVCVSRDVVFDEAATW 805
Score = 249 bits (637), Expect(2) = e-141
Identities = 152/425 (35%), Positives = 229/425 (53%), Gaps = 15/425 (3%)
Frame = +3
Query: 51 E*RERNYRPSRRSSRLSVCESVDEFAVQLNTVVSKMRAMGEKMDDTAVVKVLQAVTPK-F 227
E +E+ +R S R E+ +EFA++L VV+ +R MG M+D V K L V PK +
Sbjct: 135 EAKEKGFRRQFESMRFKERETPEEFAMRLTAVVADIRDMGGVMEDEHVNKKLLRVVPKKY 194
Query: 228 LQIASILEQFGDLRKMTAEEVFGRLKAHEQLRGFGD-TEGEHMLLI*GEWEXXXXXXXXX 404
+A LEQ D++ M EE+ GRL + + ++G + L +W+
Sbjct: 195 KPVAISLEQLLDVKTMALEELVGRLSTVDSYSDDEEGSDGGKLYLTEEQWQARV------ 248
Query: 405 XHDSGWKERDEGSDCXXXXXXXXXXXXXXXXXDERYNDSGKKY-----HKFDKAKIRCYN 569
K+R++ + GK+ D ++++C+N
Sbjct: 249 ------KQREQEGSGNSGNKGRGAPGTQNHRGKPGGSPKGKEAATGANSSRDISRVKCFN 302
Query: 570 CQNYGHFASECRKPKKEERAHFAEKQH-DDEPTLLLTE-------GCESLYTAQGEREKM 725
C +GH+A +CRKP+++ R Q ++EPTLL+ G +L G +E
Sbjct: 303 CDEFGHYARQCRKPRRQRRGEANLVQAAEEEPTLLMAHVVGVSLAGEATLGRTPGGQEVH 362
Query: 726 MFYEEKVKPRRSSEEVVFETDIWYLDTGASNHMTGCRKKFSDLNEKVCGRVKFSDGSVVE 905
+ ++ + E D W+LDTGA+NHMTG R F++L+ V G VKF DGSV+E
Sbjct: 363 LTEKKVILDHEDGGEEEVTRD-WFLDTGATNHMTGVRSAFAELDTGVVGTVKFGDGSVIE 421
Query: 906 IKRRGTVMLQYQNGEHRLLTNVYYIPKLCSSIMSLGQLDESGCNIVMERGHLHIYDRSGK 1085
I+ RGTV+ + +N +HR L VYYIPKL +I+S+G+LD G + + G + D G
Sbjct: 422 IQGRGTVVFRCKNSDHRSLDTVYYIPKLRKNIISVGRLDARGYDAHIWGGVCTLRDPDGL 481
Query: 1086 LLANVRKSENRLYILNLKVAHPVCLMGSLGDNAWRWHARYGHLNFPALRKLVQKEMVIGM 1265
LLA V++ N LYIL L +A+PVC+ S GD AWRWHAR+GHLNF +LR+L Q MV G+
Sbjct: 482 LLAKVKRDINYLYILKLHIANPVCMAASGGDMAWRWHARFGHLNFQSLRRLAQGNMVRGL 541
Query: 1266 PVVEH 1280
P+++H
Sbjct: 542 PIIDH 546
Score = 217 bits (553), Expect(4) = e-101
Identities = 110/188 (58%), Positives = 134/188 (71%), Gaps = 1/188 (0%)
Frame = +2
Query: 2492 DLPKGHRTISLKWVYKVKKNPKGDVIKHKARLVAKGYVQKQGVDFNEVFVPVARLETVRM 2671
+LP GH+ I LKWVYKVKK+P G V+KHKARLVAKGYVQ+QG+DF EVF PVAR+ETVR+
Sbjct: 948 ELPVGHKAIGLKWVYKVKKDPSGVVVKHKARLVAKGYVQQQGIDFEEVFAPVARMETVRL 1007
Query: 2672 LIALAVQEDGEVHHMDVKSTFLNGELEEEVYVAQPKGFVE-GHEEKVLRLKKALYGLRQV 2848
LIA+A + E+HHMDVKS FLNG+LEEEVYV QP GF+E G E +VLRLKKALYGL+Q
Sbjct: 1008 LIAVAANKGWEIHHMDVKSAFLNGDLEEEVYVVQPPGFIEKGKEGQVLRLKKALYGLKQA 1067
Query: 2849 PHAWNSKLDKCLQSLGFERCPLKHAVYKKRXXXXXXXXXXXXXXXXITGSNVKDIVQFKE 3028
P AWN+KL L SL F + + AVY + I+G+ +I FKE
Sbjct: 1068 PRAWNAKLHNTLISLNFIKSETESAVYVRGTGSSRLIVGVYVDDLIISGAQASEIDFFKE 1127
Query: 3029 QMKRLFEM 3052
+MK+ F M
Sbjct: 1128 EMKKKFRM 1135
Score = 110 bits (275), Expect(4) = e-101
Identities = 55/93 (59%), Positives = 66/93 (70%)
Frame = +1
Query: 3082 IEVRQEPNAITISQSGYAMKILEKLKLADCNHCQVPMELRMKLSETDANPPVDTFMYRSV 3261
+EV Q+ + + +SQ+ YA KILEK + CN QVPME R+KL VD+ MYRS
Sbjct: 1147 MEVVQKDDGVFLSQTAYAAKILEKTGMEGCNSTQVPMEARLKLKRESGGEGVDSTMYRST 1206
Query: 3262 VGSLRYLVNTRPDLAYSVGVVSRYMEAPTTLTW 3360
VGSLRYLVNTRPDLAYSVG VSR+ME PT+ W
Sbjct: 1207 VGSLRYLVNTRPDLAYSVGYVSRFMEKPTSEHW 1239
Score = 81.3 bits (199), Expect(4) = e-101
Identities = 40/79 (50%), Positives = 52/79 (65%)
Frame = +3
Query: 3354 HMAAVKQILWYV*GTINHGCVYPRRKESEAGLIGHSDSDLAEDVDDHKSTTGVIYFLGES 3533
H AAVK IL Y+ GT++ GC + RR++ E LIG SDSD+A D+DD KSTTGV+Y LG+S
Sbjct: 1238 HWAAVKHILRYIAGTLDVGCWFGRREKGELRLIGFSDSDMAGDLDDRKSTTGVLYMLGDS 1297
Query: 3534 PITWXXXXXXXXXXXXCES 3590
I+W CE+
Sbjct: 1298 LISWQSQKQKVVALSSCEA 1316
Score = 32.3 bits (72), Expect(4) = e-101
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2
Query: 3587 EYVAATAVACQGVWLGR 3637
EY+AAT ACQG+WL R
Sbjct: 1317 EYIAATTGACQGIWLNR 1333
>emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group]
Length = 1425
Score = 283 bits (724), Expect(2) = e-141
Identities = 140/259 (54%), Positives = 181/259 (69%), Gaps = 1/259 (0%)
Frame = +1
Query: 1279 T*QIHDGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLLVDDHS 1458
T Q+ DGC+ GK PF FRA + L LVHG+LCG ITPATP KYF+LLVDD S
Sbjct: 547 TDQLCDGCLAGKQRRLPFPEEAKFRAQEALELVHGDLCGPITPATPGGRKYFLLLVDDMS 606
Query: 1459 RYMWVVMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEELGIKR 1638
R+MW+ +L K E A +F+A VE ++ KL+A R+DRGGEF S EF YC + G++R
Sbjct: 607 RHMWIRLLSGKHEAATAIKQFQAGVELESGRKLRALRTDRGGEFTSVEFMDYCTDRGMRR 666
Query: 1639 YLTASYSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPTQSLEG 1818
LTA YSPQQN VVERRNQTV+ ARS+LK+ +PA +WGEAV AVY+LNR+PT++L+G
Sbjct: 667 ELTAPYSPQQNRVVERRNQTVVAAARSMLKAAGLPARFWGEAVVAAVYVLNRSPTKALDG 726
Query: 1819 MTPYQAWMGRKPNVQHLRVLVAWHMSK**THTLKK-SNRSVPMVLFGYEPGSKAYRVYDS 1995
+TPY+AW GR+P+V+HLRV K L+K +R MV GYE GSKAYR+YD
Sbjct: 727 VTPYEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDP 786
Query: 1996 NQKKLHMSRDIIFDEDREW 2052
+++ +SRD++FDE W
Sbjct: 787 VAQRVCVSRDVVFDETATW 805
Score = 249 bits (635), Expect(2) = e-141
Identities = 157/428 (36%), Positives = 231/428 (53%), Gaps = 18/428 (4%)
Frame = +3
Query: 51 E*RERNYRPSRRSSRLSVCESVDEFAVQLNTVVSKMRAMGEKMDDTAVVKVLQAVTPK-F 227
E +E+ +R S R E+ +EFA++L VV+ +R MG M+D V K L V PK +
Sbjct: 135 EAKEQGFRRQFESMRFKERETPEEFAMRLTAVVADIRDMGGVMEDEHVNKKLLRVVPKKY 194
Query: 228 LQIASILEQFGDLRKMTAEEVFGRLKAHEQLRGFGDTEGEH---MLLI*GEWEXXXXXXX 398
+A LEQ D++ M EE+ GRL + D EG + + L +W+
Sbjct: 195 KPVAISLEQLLDVKTMALEELVGRLSTVDSYSD--DEEGSNGGKLYLTEEQWQARV---- 248
Query: 399 XXXHDSGWKERDEGSDCXXXXXXXXXXXXXXXXXDERYNDSGKKY-----HKFDKAKIRC 563
K+R++ + GK+ D ++++C
Sbjct: 249 --------KQREQEGSGNSGNKGRGAPGAQNHRGKPGGSPKGKEAATGANSSRDISRVKC 300
Query: 564 YNCQNYGHFASECRKPKKEERAHFAEKQH-DDEPTLLLTE------GCESLYTAQGEREK 722
+NC +GH+A +CRKP+++ R Q ++EPTLL+ E+ ++
Sbjct: 301 FNCDEFGHYARQCRKPRRQRRGEANLVQAAEEEPTLLMAHVVGVSLAGEATLGRTPSGQE 360
Query: 723 MMFYEEKV--KPRRSSEEVVFETDIWYLDTGASNHMTGCRKKFSDLNEKVCGRVKFSDGS 896
+ E+KV EE V T W+LDTGA+NHMTG R F++L+ V G VKF DGS
Sbjct: 361 VHLTEKKVILDHEDGGEEEV--TGDWFLDTGATNHMTGVRSAFAELDTGVVGTVKFGDGS 418
Query: 897 VVEIKRRGTVMLQYQNGEHRLLTNVYYIPKLCSSIMSLGQLDESGCNIVMERGHLHIYDR 1076
V+EI+ RGTV+ + +NG+HR L VYYIPKL +I+S+G+LD G + + G + D
Sbjct: 419 VIEIQGRGTVVFRCKNGDHRSLDAVYYIPKLRKNIISVGRLDARGYDAHIWGGVCTLRDP 478
Query: 1077 SGKLLANVRKSENRLYILNLKVAHPVCLMGSLGDNAWRWHARYGHLNFPALRKLVQKEMV 1256
+G LLA V++ N LYIL L +A+PVC+ S GD AWRWHAR+GHLNF +LR+L Q MV
Sbjct: 479 NGLLLAKVKRDINYLYILKLHIANPVCMAASGGDTAWRWHARFGHLNFQSLRRLAQGNMV 538
Query: 1257 IGMPVVEH 1280
G+P ++H
Sbjct: 539 RGLPTIDH 546
Score = 221 bits (562), Expect(5) = e-109
Identities = 115/193 (59%), Positives = 138/193 (71%), Gaps = 2/193 (1%)
Frame = +2
Query: 2492 DLPKGHRTISLKWVYKVKKNPKGDVIKHKARLVAKGYVQKQGVDFNEVFVPVARLETVRM 2671
+LP GH+ I LKWVYK+KK+P G ++KHKARLVAKGYVQ+QGVDF+EVF PVAR+ETVR+
Sbjct: 947 ELPAGHKAIGLKWVYKLKKDPSGAIVKHKARLVAKGYVQQQGVDFDEVFAPVARMETVRL 1006
Query: 2672 LIALAVQEDGEVHHMDVKSTFLNGELEEEVYVAQPKGFVE-GHEEKVLRLKKALYGLRQV 2848
L+ALA Q+ E+HHMDVKS FLNGELEEEVYV QP GF + + KVL+L+KALYGLRQ
Sbjct: 1007 LVALAAQKGWEIHHMDVKSAFLNGELEEEVYVVQPPGFDDKTNASKVLKLRKALYGLRQA 1066
Query: 2849 PHAWNSKLDKCLQSLGFERCPLKHAVYKKRXXXXXXXXXXXXXXXXITGSNVKDIVQFKE 3028
P AWN+KLD L SL F + + AVY + ITGS K+I FK
Sbjct: 1067 PRAWNAKLDNTLLSLKFNKSATESAVYVRGVGDSKLIVGVYVDDLIITGSQKKEIDAFKL 1126
Query: 3029 QMKRLFEMI-LGF 3064
QMK+ F M LGF
Sbjct: 1127 QMKQRFNMSDLGF 1139
Score = 108 bits (271), Expect(5) = e-109
Identities = 57/93 (61%), Positives = 66/93 (70%)
Frame = +1
Query: 3082 IEVRQEPNAITISQSGYAMKILEKLKLADCNHCQVPMELRMKLSETDANPPVDTFMYRSV 3261
+EV Q+ I +SQS YA KILEK + CN QVPME R+KLS+ VD YRS+
Sbjct: 1146 MEVVQKGEGIFLSQSAYAGKILEKTGMEGCNPTQVPMEARLKLSKEGTGECVDPTEYRSI 1205
Query: 3262 VGSLRYLVNTRPDLAYSVGVVSRYMEAPTTLTW 3360
VGSLRYLVNTRPDLAYSVG VSR+ME PT+ W
Sbjct: 1206 VGSLRYLVNTRPDLAYSVGYVSRFMEKPTSEHW 1238
Score = 73.9 bits (180), Expect(5) = e-109
Identities = 38/79 (48%), Positives = 47/79 (59%)
Frame = +3
Query: 3354 HMAAVKQILWYV*GTINHGCVYPRRKESEAGLIGHSDSDLAEDVDDHKSTTGVIYFLGES 3533
H AAVK IL Y+ GTI GC Y R + A L+G SDSD+A D+DD KSTTGV++ G S
Sbjct: 1237 HWAAVKHILRYISGTIKTGCWYGREEVGNAKLVGFSDSDMAGDLDDRKSTTGVLFRYGGS 1296
Query: 3534 PITWXXXXXXXXXXXXCES 3590
I+W CE+
Sbjct: 1297 LISWQSQKQKVVALSSCEA 1315
Score = 52.8 bits (125), Expect(5) = e-109
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = +3
Query: 2274 TPDFSTSSEK---PLRYHSLQEIYDETREVEG--EAALCFLSVEEPTTFEEANDSYCWKK 2438
TP S + E P+RY +Q+I T V + C ++ EEPT+F EA CW++
Sbjct: 869 TPPTSVTPETDGGPVRYRRVQDILSTTEPVLDFDYSDQCLIATEEPTSFVEAEKHECWRR 928
Query: 2439 AMAEEIAAIQRNHTCEL 2489
AM EE+ +++ N T L
Sbjct: 929 AMVEELRSVEENQTWSL 945
Score = 33.5 bits (75), Expect(5) = e-109
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2
Query: 3587 EYVAATAVACQGVWLGR 3637
EY+AAT ACQG+WL R
Sbjct: 1316 EYIAATTAACQGIWLSR 1332
>emb|CCI55340.1| PH01B019A14.9 [Phyllostachys edulis]
Length = 1594
Score = 276 bits (706), Expect(2) = e-140
Identities = 133/256 (51%), Positives = 172/256 (67%)
Frame = +1
Query: 1285 QIHDGCIIGKHHIAPFSHSTNFRADKPLRLVHGNLCGSITPATPASNKYFMLLVDDHSRY 1464
Q D C++ K PF +FRA + L LVHG+LCG +TPATP +YF+LLVDD SRY
Sbjct: 675 QFCDTCVLTKLRRLPFPRQASFRAKEKLELVHGDLCGPVTPATPGGRRYFLLLVDDVSRY 734
Query: 1465 MWVVMLKSKSETFGAFNKFKASVEAKAENKLKAFRSDRGGEFISKEFTSYCEELGIKRYL 1644
MW V+L K+ A +A+ EA+ KL+ R+D GGEF + EF +YC GI R+
Sbjct: 735 MWAVLLDVKASAADAIKCLQAAAEAECGRKLRVLRTDNGGEFTAAEFAAYCANEGIHRHF 794
Query: 1645 TASYSPQQNGVVERRNQTVLGMARSLLKSKHVPAVYWGEAVRTAVYLLNRAPTQSLEGMT 1824
+A Y+PQQNGVVERRNQTV+ AR+LLK + +PA YWGEAV TAV+LLNR+PT++L+G T
Sbjct: 795 SAPYTPQQNGVVERRNQTVVATARALLKQRGMPAFYWGEAVMTAVHLLNRSPTKALDGKT 854
Query: 1825 PYQAWMGRKPNVQHLRVLVAWHMSK**THTLKKSNRSVPMVLFGYEPGSKAYRVYDSNQK 2004
PY+AW GRKP V HLRV K H K +RS P V GY G+KAYRV D +
Sbjct: 855 PYEAWHGRKPAVSHLRVFGCLAFVKELNHVGKLDDRSTPGVFIGYTEGAKAYRVLDPTTR 914
Query: 2005 KLHMSRDIIFDEDREW 2052
++ ++RD++FDE R W
Sbjct: 915 RVRITRDVVFDEGRGW 930
Score = 253 bits (647), Expect(2) = e-140
Identities = 158/399 (39%), Positives = 220/399 (55%), Gaps = 7/399 (1%)
Frame = +3
Query: 108 ESVDEFAVQLNTVVSKMRAMGEKM--DDTAVVKVLQAVTPKFLQIASILEQFGDLRKMTA 281
E VD+FA++LNT++ K+ G+ ++ AV K+ + V K+ Q+A +E DL MT
Sbjct: 280 EDVDDFALRLNTLLQKLVQFGDDTYGEERAVEKLFRCVPEKYKQMARSIESLLDLSTMTI 339
Query: 282 EEVFGRLK---AHEQLRGFGD-TEGEHMLLI*GEWEXXXXXXXXXXHDSGWKERDEGSDC 449
EE GRLK + E R G T G +LL +W S R G
Sbjct: 340 EEALGRLKVVDSDEPQRLSGPVTIGGKLLLTREQWAAGQGDRKKGEPSSTTGGRKRGKPR 399
Query: 450 XXXXXXXXXXXXXXXXXDERYNDSGKKYHKFDKAKIRCYNCQNYGHFASECRKPKKEERA 629
+ +GK+ D + C+NC GH+A +CR+P++ + A
Sbjct: 400 KDAQAGARGRAEGDDRGGAQGGAAGKQKPARDDS---CHNCGKPGHWARDCRQPRRGQ-A 455
Query: 630 HFAEKQHDDEPTLLLTEGCESLYTAQGEREKMMFYEE-KVKPRRSSEEVVFETDIWYLDT 806
H A+ + +++P L + L A ++ +E K +TD W LDT
Sbjct: 456 HVAQAEEEEQPALFIAHASIELPPAAPAAAALLHLDEPKAHALLGDSSGNDKTDGWCLDT 515
Query: 807 GASNHMTGCRKKFSDLNEKVCGRVKFSDGSVVEIKRRGTVMLQYQNGEHRLLTNVYYIPK 986
GA++HMTG R+ FS+L+ V G VKF D S VEIK G+V+ + GEHRLLT VYYIP
Sbjct: 516 GATHHMTGRREFFSELDSGVRGTVKFGDASAVEIKGVGSVVFVAKTGEHRLLTGVYYIPA 575
Query: 987 LCSSIMSLGQLDESGCNIVMERGHLHIYDRSGKLLANVRKSENRLYILNLKVAHPVCLMG 1166
L +SI+SLGQLDE+G + +E G L I+D S +LL V +S NRLY+L+ +VA P+CL
Sbjct: 576 LRNSIISLGQLDENGSRVEIEHGVLRIWDHSRRLLVKVNRS-NRLYVLHAQVAQPLCLAA 634
Query: 1167 SLGDNAWRWHARYGHLNFPALRKLVQKEMVIGMPVVEHV 1283
D+AWRWH R+GHLNF ALR+L KEMV GMP V+HV
Sbjct: 635 RRDDDAWRWHERFGHLNFEALRQLGSKEMVRGMPHVDHV 673
Score = 194 bits (492), Expect(5) = 1e-92
Identities = 100/188 (53%), Positives = 128/188 (68%), Gaps = 1/188 (0%)
Frame = +2
Query: 2492 DLPKGHRTISLKWVYKVKKNPKGDVIKHKARLVAKGYVQKQGVDFNEVFVPVARLETVRM 2671
DLP GH ISLKWV+K+KKN G+VIKHKARLVA+G+VQ++GVDF++ F PVAR+E+
Sbjct: 1122 DLPAGHHAISLKWVFKLKKNEAGEVIKHKARLVARGFVQQEGVDFDDAFAPVARMES--- 1178
Query: 2672 LIALAVQEDGEVHHMDVKSTFLNGELEEEVYVAQPKGF-VEGHEEKVLRLKKALYGLRQV 2848
E VHHM+VKS FLNG+L+EEVYV QP GF + G E KVLRL+KALYGLRQ
Sbjct: 1179 -------EGWCVHHMNVKSAFLNGDLKEEVYVRQPPGFIIPGKESKVLRLRKALYGLRQA 1231
Query: 2849 PHAWNSKLDKCLQSLGFERCPLKHAVYKKRXXXXXXXXXXXXXXXXITGSNVKDIVQFKE 3028
P AWN+KLD L+ +GF++ + AVY++ ITG+ K+I FK
Sbjct: 1232 PRAWNAKLDSTLKQMGFQQSAHEAAVYRQGKGGNALLIGVYVDDLVITGTKEKEIEAFKA 1291
Query: 3029 QMKRLFEM 3052
+MK F+M
Sbjct: 1292 EMKATFQM 1299
Score = 97.8 bits (242), Expect(5) = 1e-92
Identities = 48/90 (53%), Positives = 62/90 (68%)
Frame = +1
Query: 3082 IEVRQEPNAITISQSGYAMKILEKLKLADCNHCQVPMELRMKLSETDANPPVDTFMYRSV 3261
IEV Q+ + I++ Q+ YA +I+E L DCN PME R+KLS VD YR +
Sbjct: 1311 IEVHQDSSGISLRQTAYAKRIVELGGLTDCNPAHTPMEERLKLSRESTAEEVDATQYRRI 1370
Query: 3262 VGSLRYLVNTRPDLAYSVGVVSRYMEAPTT 3351
VGSLRYLV+TRPDLA++VG VSR+M+ PTT
Sbjct: 1371 VGSLRYLVHTRPDLAFAVGYVSRFMQRPTT 1400
Score = 70.1 bits (170), Expect(5) = 1e-92
Identities = 37/79 (46%), Positives = 49/79 (62%)
Frame = +3
Query: 3354 HMAAVKQILWYV*GTINHGCVYPRRKESEAGLIGHSDSDLAEDVDDHKSTTGVIYFLGES 3533
H AVK+IL YV GT ++G YPR + A IG+SDSD A D+D KST+G++YFLG+
Sbjct: 1402 HQQAVKRILRYVAGTSDYGLHYPRCPGA-AHFIGYSDSDHAGDIDTSKSTSGILYFLGKC 1460
Query: 3534 PITWXXXXXXXXXXXXCES 3590
PI+W CE+
Sbjct: 1461 PISWQSVKQQVVALSSCEA 1479
Score = 47.4 bits (111), Expect(5) = 1e-92
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Frame = +3
Query: 2151 SQEPYPPWSARALVELQEATSRQP----HQQEHQ-ELTTTLLHNEGTPDFSTSSEKPLRY 2315
S P PP + R+ + P H ++H E T L ++E D E PLRY
Sbjct: 998 SPPPAPPATPRSPTPAPTPSGSAPAASAHDEQHTVEFATPLSNDEDRIDAYHGGE-PLRY 1056
Query: 2316 HSLQEIYDET-------REVEGEAALCFLSVEEPTTFEEANDSYCWKKAMAEEIAAIQRN 2474
++ ++ E R++E E L EP +F EA + W+ AM EE+ A++RN
Sbjct: 1057 RTMDDLLGEQPVPELAQRDLEAELHLA-QDDGEPRSFAEAERNAAWRAAMQEEMDAVERN 1115
Query: 2475 HTCEL 2489
EL
Sbjct: 1116 KMWEL 1120
Score = 25.4 bits (54), Expect(5) = 1e-92
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 3587 EYVAATAVACQGVWLGR 3637
EY+AAT + Q +WL R
Sbjct: 1480 EYIAATTASTQALWLAR 1496