BLASTX nr result

ID: Anemarrhena21_contig00012428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00012428
         (783 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas]     60   2e-06
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              57   1e-05
dbj|BAE79383.1| unnamed protein product [Ipomoea batatas]              57   1e-05
dbj|BAE79381.1| unnamed protein product [Ipomoea batatas]              57   1e-05

>gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas]
          Length = 1836

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
 Frame = +3

Query: 3   PLIPAIQVLNFFQRVQYEGIRVACFNCGVVGHNRERCPQLK--TPSSPESTDTQHT 164
           PL+  + V N+ Q V+YEG+ V CF+CGVVGH  + CP  K   P +P    TQ+T
Sbjct: 242 PLVSEVWVGNYLQTVEYEGLHVICFSCGVVGHREQSCPDSKQNVPETPNVEQTQNT 297


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 57.4 bits (137), Expect = 1e-05
 Identities = 26/57 (45%), Positives = 36/57 (63%)
 Frame = +3

Query: 3   PLIPAIQVLNFFQRVQYEGIRVACFNCGVVGHNRERCPQLKTPSSPESTDTQHTSVT 173
           PL+  I V+   Q+V+YEG+ V CF CGVVGH  + CP L  P++PE+  T   + T
Sbjct: 243 PLVSEIWVMGDVQKVEYEGLHVVCFGCGVVGHREQACP-LARPTAPETMATGSNTET 298


>dbj|BAE79383.1| unnamed protein product [Ipomoea batatas]
          Length = 532

 Score = 57.4 bits (137), Expect = 1e-05
 Identities = 26/57 (45%), Positives = 36/57 (63%)
 Frame = +3

Query: 3   PLIPAIQVLNFFQRVQYEGIRVACFNCGVVGHNRERCPQLKTPSSPESTDTQHTSVT 173
           PL+  I V+   Q+V+YEG+ V CF CGVVGH  + CP L  P++PE+  T   + T
Sbjct: 243 PLVSEIWVMGDVQKVEYEGLHVVCFGCGVVGHREQACP-LARPTAPETMATGSNTET 298


>dbj|BAE79381.1| unnamed protein product [Ipomoea batatas]
          Length = 532

 Score = 57.4 bits (137), Expect = 1e-05
 Identities = 26/57 (45%), Positives = 36/57 (63%)
 Frame = +3

Query: 3   PLIPAIQVLNFFQRVQYEGIRVACFNCGVVGHNRERCPQLKTPSSPESTDTQHTSVT 173
           PL+  I V+   Q+V+YEG+ V CF CGVVGH  + CP L  P++PE+  T   + T
Sbjct: 243 PLVSEIWVMGDVQKVEYEGLHVVCFGCGVVGHREQACP-LARPTAPETMATGSNTET 298


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