BLASTX nr result

ID: Anemarrhena21_contig00012406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00012406
         (745 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010910774.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-09
ref|XP_008792408.1| PREDICTED: pentatricopeptide repeat-containi...    69   4e-09
ref|XP_009395249.1| PREDICTED: pentatricopeptide repeat-containi...    59   3e-06

>ref|XP_010910774.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Elaeis guineensis]
          Length = 440

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 56/166 (33%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
 Frame = -1

Query: 739 TYNALVAASCKAQDFPTTCQQFE--ADER*CVPAFC--GHLFVLI*DTVNLVILHEGFQS 572
           TYN L+AASCKA DFP   Q      D+  C P+    G L        NL    + FQ+
Sbjct: 269 TYNTLIAASCKAGDFPAVDQLLNKMVDDG-CKPSVVTYGALIHGYCKAGNLDEALKNFQN 327

Query: 571 MAHNAVPSKTVEYNILLDESAKKKLFTLQCVSWLRCGTRVFLPILLPSNAMFKGFLRKNI 392
           M    VP  TV YN L+D   K +   +          +   P ++  NA+FKG    N+
Sbjct: 328 MDTAGVPPNTVIYNSLIDSLCKDRKIDIAISLMDEMQKKGVPPDVITYNAIFKGLCDSNM 387

Query: 391 CLNT-QADE*MKEQGVRS**CTMENFKEWV*AITKI*RLRCFVQGK 257
                +  + M+++G      TM+   EW+ AI ++ RLRCFV GK
Sbjct: 388 SDKAFELMDRMRQEGCNPDYVTMDILTEWLSAIGEMERLRCFVNGK 433


>ref|XP_008792408.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Phoenix dactylifera]
          Length = 653

 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 57/165 (34%), Positives = 78/165 (47%), Gaps = 4/165 (2%)
 Frame = -1

Query: 739 TYNALVAASCKAQDFPTTCQQF-EADER*CVPAFC--GHLFVLI*DTVNLVILHEGFQSM 569
           TYN L+AASCKA DFPT  Q   +     C P+    G L        NL    + FQ+M
Sbjct: 482 TYNTLIAASCKAGDFPTVGQLLNKMVNDGCKPSVVTYGALIHGYCKAGNLDEASKIFQNM 541

Query: 568 AHNAVPSKTVEYNILLDESAKKKLFTLQCVSWLRCGTRVFLPILLPSNAMFKGFLRKNIC 389
               VP  TV YN L+D   K +   +          +   P ++  NAMFKG   +N+ 
Sbjct: 542 DAAGVPPNTVIYNSLIDSLCKDRKIDIAISLMDEMQKKGVPPDVITYNAMFKGLRDRNMS 601

Query: 388 LNT-QADE*MKEQGVRS**CTMENFKEWV*AITKI*RLRCFVQGK 257
               Q  + M+++G      TM+   EW+ AI ++ RLR FV GK
Sbjct: 602 DEAFQLMDRMRQEGCNPDYVTMDILTEWLSAIGEMERLRRFVNGK 646


>ref|XP_009395249.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Musa acuminata subsp. malaccensis]
          Length = 621

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
 Frame = -1

Query: 739 TYNALVAASCKAQDFPTTCQQFEADER*CVPAFCGHLFVLI*DTVN-------LVILHEG 581
           TYN L+AASCKA DF T  Q         V   C    V     +N       L    + 
Sbjct: 445 TYNTLIAASCKAGDFATVNQLLNK----MVDDGCKLSVVTYGALINGYCKAGELDQAMKT 500

Query: 580 FQSMAHNAVPSKTVEYNILLDESAKKKLFTLQCVSWLRCGTRVFLPILLPSNAMFKGFLR 401
           F+++  + VP+ TV YNIL+D   K K   +          +   P +   NA+FKG   
Sbjct: 501 FENLGASMVPANTVIYNILIDSLCKNKKVDIAVSLVEEMQVKGVPPSVTTYNAIFKGLRD 560

Query: 400 KNICLNT-QADE*MKEQGVRS**CTMENFKEWV*AITKI*RLRCFVQ 263
           +++     +  + M EQG +    TM+   EW+ AI ++ RL+ FVQ
Sbjct: 561 RHMSDKAFKLMDRMSEQGCKPDCVTMDVLTEWLTAIGEMERLKRFVQ 607


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