BLASTX nr result
ID: Anemarrhena21_contig00011502
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00011502
(1481 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010937236.1| PREDICTED: DNA-directed RNA polymerase I sub... 400 e-108
ref|XP_008783442.1| PREDICTED: DNA-directed RNA polymerase I sub... 396 e-107
ref|XP_009386771.1| PREDICTED: uncharacterized protein LOC103973... 393 e-106
ref|XP_010273794.1| PREDICTED: DNA-directed RNA polymerase I sub... 331 8e-88
ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I sub... 330 2e-87
emb|CBI35920.3| unnamed protein product [Vitis vinifera] 318 9e-84
ref|XP_006426597.1| hypothetical protein CICLE_v10025597mg [Citr... 301 1e-78
ref|XP_006465974.1| PREDICTED: uncharacterized protein LOC102616... 300 1e-78
ref|XP_010062676.1| PREDICTED: DNA-directed RNA polymerase I sub... 298 6e-78
ref|XP_010087702.1| DNA-directed RNA polymerase I subunit rpa49 ... 292 4e-76
gb|EMT03118.1| DNA-directed RNA polymerase I subunit rpa49 [Aegi... 290 2e-75
ref|XP_009769327.1| PREDICTED: DNA-directed RNA polymerase I sub... 290 3e-75
ref|XP_012068922.1| PREDICTED: DNA-directed RNA polymerase I sub... 288 6e-75
ref|XP_012068924.1| PREDICTED: DNA-directed RNA polymerase I sub... 288 6e-75
ref|XP_009620774.1| PREDICTED: DNA-directed RNA polymerase I sub... 288 1e-74
ref|XP_007039490.1| DNA-directed RNA polymerase I subunit rpa49,... 286 4e-74
dbj|BAJ90975.1| predicted protein, partial [Hordeum vulgare subs... 285 6e-74
dbj|BAJ94402.1| predicted protein, partial [Hordeum vulgare subs... 285 6e-74
ref|XP_011014273.1| PREDICTED: DNA-directed RNA polymerase I sub... 284 1e-73
ref|XP_006369274.1| hypothetical protein POPTR_0001s20580g [Popu... 283 2e-73
>ref|XP_010937236.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Elaeis
guineensis]
Length = 425
Score = 400 bits (1029), Expect = e-108
Identities = 234/427 (54%), Positives = 294/427 (68%), Gaps = 9/427 (2%)
Frame = -2
Query: 1453 DNEVENRMEKRKKQKKRLHVELSALTDTPDRIAPVVGYFSSGYKPYDSQEP----PEVRV 1286
++ VE R E +KK +KR+ VE+ L++T DRIAP+VGYF SGY P+++ P VRV
Sbjct: 2 EDAVEGRTESKKK-RKRVEVEMEVLSETTDRIAPIVGYFPSGYDPHNAASAAAGGPSVRV 60
Query: 1285 FRNKNHRLSRLDLVVKPKESNVEFVGKSYEGEAAIPQLCHYALGILDKDTQTLKVVPIAA 1106
FRN+ + SRL+LVV P++SNVEFVG SY GEAA PQLC Y LG+LDK+T TLK+VPIAA
Sbjct: 61 FRNQMYS-SRLELVVSPRDSNVEFVGTSYSGEAAGPQLCTYTLGVLDKETHTLKIVPIAA 119
Query: 1105 NKIFRLEPRVMKSSSAE-EPTEGL-EEGLSAVEAGRKISDLTSLYGTKKQRNMDKKFRSL 932
NKIFRLEPR+ K+ S + EP+EGL EEGL+ + RKI+DLT+LYGTKK R+ D ++RSL
Sbjct: 120 NKIFRLEPRLTKNLSTDTEPSEGLAEEGLAEGKVERKIADLTNLYGTKKDRDKDNRWRSL 179
Query: 931 VEQTNDPSARENL---XXXXXXXXXXXXAFKDTNGTAGPNIPPHDLSAVTPEKAYLLDEI 761
+Q NDPSARE L + +D A PNIPPHD SA T EKAYLLDEI
Sbjct: 180 NQQRNDPSAREQLASENPGGDDDDIDNESHEDVKEAAVPNIPPHDRSANTSEKAYLLDEI 239
Query: 760 ILKGERDYLFDILELLHSGIGEKDTFWEENYYPSFVVNRIPKLKEIQDEEEKKKHAFILS 581
I K ER YL DILE L G +D YP+FV NRI KL+EIQD++EK+K A ILS
Sbjct: 240 IPKAERPYLLDILENLQYG---EDL--ASKSYPTFVYNRIHKLREIQDDKEKEKLACILS 294
Query: 580 YITHLVNFWKLTASPRQSKSRDIIYGDAINKYKIPRIIYQKFAKLFLDSVSNVLATDKKG 401
YITHL FW+ R SK + G + KIPRIIYQK ++F++ S++++ +KK
Sbjct: 295 YITHLHTFWERI---RFSKHKAKFLGMTADAPKIPRIIYQKVVRMFVNPESDIVSMEKKE 351
Query: 400 LVIGYILVLTLFADSFCSNPSDIAKDLGMTRSQLRLYFRQLGCKLSTDSRFGVHRTEYFW 221
L+IGYILVLTLFAD F S+PSDIA+DL MT L+ YF QLGCK+ + F + F
Sbjct: 352 LLIGYILVLTLFADKFRSDPSDIARDLKMTVHSLKPYFLQLGCKIFHEGAF----QQSFM 407
Query: 220 TLHVPLK 200
TL VPL+
Sbjct: 408 TLPVPLQ 414
>ref|XP_008783442.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Phoenix
dactylifera]
Length = 430
Score = 396 bits (1017), Expect = e-107
Identities = 235/433 (54%), Positives = 292/433 (67%), Gaps = 11/433 (2%)
Frame = -2
Query: 1465 MADSDNEVENRMEKRKKQKKRLHVELSALTDTPDRIAPVVGYFSSGYKPYDSQ----EPP 1298
M + VE R KK +KR+ VE+ L++T DRIAP+VGYF SGY P+++ P
Sbjct: 1 MLAMEEAVEGRTASTKK-RKRVEVEMEVLSETTDRIAPIVGYFPSGYDPHNAAFAAAGSP 59
Query: 1297 EVRVFRNKNHRLSRLDLVVKPKESNVEFVGKSYEGEAAIPQLCHYALGILDKDTQTLKVV 1118
VRVFRN+ H SRL+LVV P+ESNVEFVG SY GEAA PQLC Y LG+LDK+TQTLK++
Sbjct: 60 SVRVFRNQRHS-SRLELVVSPRESNVEFVGTSYSGEAAGPQLCTYTLGVLDKETQTLKIL 118
Query: 1117 PIAANKIFRLEPRVMKSSSAE-EPTEGL-EEGLSAVEAGRKISDLTSLYGTKKQRNMDKK 944
PIAANKIFRLEPR+ K+ SA+ EP+EGL EEGL+ + RKI+DLT+LYGTKK R+ D +
Sbjct: 119 PIAANKIFRLEPRLTKNLSADTEPSEGLAEEGLAEGKVERKIADLTNLYGTKKDRDKDNR 178
Query: 943 FRSLVEQTNDPS-----ARENLXXXXXXXXXXXXAFKDTNGTAGPNIPPHDLSAVTPEKA 779
+R L +Q NDPS A ENL A +D A PNIPPHD SA TPEKA
Sbjct: 179 WRLLNQQRNDPSTQEQLANENLGGGGDDDDVDNEAPEDVKEAAVPNIPPHDRSANTPEKA 238
Query: 778 YLLDEIILKGERDYLFDILELLHSGIGEKDTFWEENYYPSFVVNRIPKLKEIQDEEEKKK 599
YLLDEI+ + ER YL DILE L G +D YP+FV NRI KL+E+QD++EK+K
Sbjct: 239 YLLDEIMPRAERAYLLDILENLQYG---EDL--ASKSYPAFVYNRIHKLREVQDDKEKEK 293
Query: 598 HAFILSYITHLVNFWKLTASPRQSKSRDIIYGDAINKYKIPRIIYQKFAKLFLDSVSNVL 419
A ILSYITHL FW R SK + G KIPRIIYQK ++F++ S+++
Sbjct: 294 LACILSYITHLHAFW---GRIRFSKHKARFVGMTAGGPKIPRIIYQKLLRMFVNPDSDLV 350
Query: 418 ATDKKGLVIGYILVLTLFADSFCSNPSDIAKDLGMTRSQLRLYFRQLGCKLSTDSRFGVH 239
+ +KK L+IGYILVLTLF D F S+PSDIA+DL MT L+ Y+ QLGCKL D+ F
Sbjct: 351 SMEKKELLIGYILVLTLFVDKFHSDPSDIARDLKMTVHSLKPYYLQLGCKLFQDAAF--- 407
Query: 238 RTEYFWTLHVPLK 200
+ F TL VPL+
Sbjct: 408 -QQAFMTLPVPLQ 419
>ref|XP_009386771.1| PREDICTED: uncharacterized protein LOC103973833 [Musa acuminata
subsp. malaccensis]
Length = 424
Score = 393 bits (1009), Expect = e-106
Identities = 219/428 (51%), Positives = 292/428 (68%), Gaps = 2/428 (0%)
Frame = -2
Query: 1465 MADSDNEVENRMEKRKKQKKRLHVELSALTDTPDRIAPVVGYFSSGYKPYDSQEPPEVRV 1286
MA++ + + +K+KK+ KR+ VE+ AL++ DR+APVVGYF SGY P P ++V
Sbjct: 1 MAEATDGRSDTKKKKKKRNKRVSVEMEALSEAADRVAPVVGYFPSGYDPRGEGADPSIKV 60
Query: 1285 FRNKNHRLSRLDLVVKPKESNVEFVGKSYEGEAAIPQLCHYALGILDKDTQTLKVVPIAA 1106
FRNK R +RL+LVV P + V+FVGKSY GEAA Q+C YALG+LDK++QTL++VPIA+
Sbjct: 61 FRNKK-RPNRLELVVSPSGTGVDFVGKSYAGEAAGAQICSYALGVLDKESQTLRIVPIAS 119
Query: 1105 NKIFRLEPRVMKSSSAE-EPTEGL-EEGLSAVEAGRKISDLTSLYGTKKQRNMDKKFRSL 932
NKI RLEPR+ + A+ E ++GL EE ++ + RK+ DLTSLYGTKK R+ D K+RSL
Sbjct: 120 NKILRLEPRLKMNPFADTEVSDGLAEESIATSKTERKMVDLTSLYGTKKDRDKDNKWRSL 179
Query: 931 VEQTNDPSARENLXXXXXXXXXXXXAFKDTNGTAGPNIPPHDLSAVTPEKAYLLDEIILK 752
++Q ND SARE+L +DT T NIPP+D SA TPEKAYLLDEII K
Sbjct: 180 IQQRNDSSAREHLENINLNADGESQVLEDTLETTTRNIPPYDASADTPEKAYLLDEIIPK 239
Query: 751 GERDYLFDILELLHSGIGEKDTFWEENYYPSFVVNRIPKLKEIQDEEEKKKHAFILSYIT 572
GER +L DIL+ LHSG T YPSFV NR+ KL+EIQDE+E++K A I SYI+
Sbjct: 240 GERVHLLDILDDLHSG-----TDIPSKSYPSFVFNRMHKLREIQDEKEREKLACIFSYIS 294
Query: 571 HLVNFWKLTASPRQSKSRDIIYGDAINKYKIPRIIYQKFAKLFLDSVSNVLATDKKGLVI 392
HL NFW+ + R KS + + + KIPRI+YQK ++FLD SNVL+T+K L+I
Sbjct: 295 HLQNFWERSRPSRHFKSAS--HDKSTDHLKIPRIVYQKLLRMFLDRESNVLSTEKNELLI 352
Query: 391 GYILVLTLFADSFCSNPSDIAKDLGMTRSQLRLYFRQLGCKLSTDSRFGVHRTEYFWTLH 212
G+ILVLTLFAD F ++PSDIA+DL MT L+ Y++QLGCK+ +S F L+
Sbjct: 353 GHILVLTLFADCFQTDPSDIARDLKMTVQTLKPYYQQLGCKIFRES----PSAPMFMILN 408
Query: 211 VPLKSADL 188
PL+ ++
Sbjct: 409 APLQFPEI 416
>ref|XP_010273794.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Nelumbo
nucifera]
Length = 406
Score = 331 bits (849), Expect = 8e-88
Identities = 198/393 (50%), Positives = 251/393 (63%), Gaps = 5/393 (1%)
Frame = -2
Query: 1426 KRKKQKKRLHVELSALTDTPDRIAPVVGYFSSGYKPYDSQEPP--EVRVFRNKNHRLSRL 1253
K+ K++KRL V++ PD+I P+VGYF SG+ P S+E +VRV+ NKN R +RL
Sbjct: 5 KKNKKRKRLDVKMEIFHQHPDKIPPLVGYFPSGFNPKRSEEEDSTKVRVYSNKN-RPNRL 63
Query: 1252 DLVVKPKESNVEFVGKSYEGEAAIPQLCHYALGILDKDTQTLKVVPIAANKIFRLEPRVM 1073
LVV P S VEFVG SY EAA Q+C YALG+LDK+TQTLK+VPIA+NKIFRLEPRV
Sbjct: 64 QLVVSPNSSKVEFVGTSYSSEAAAAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVR 123
Query: 1072 KSSSAEEPTEG--LEEGLSAVEAGRKISDLTSLYGTKKQRNMDKKFRSLVEQTNDPSARE 899
S +++ G EE L+A + KI DLT+LYGTKK + KK SL +Q DP +++
Sbjct: 124 GSEVSDKEPRGELQEEDLTAEQKADKIRDLTNLYGTKKSISRAKKMESL-KQKEDPISQD 182
Query: 898 NLXXXXXXXXXXXXAFKDTNGTAGPNIPPHDLSAVTPEKAYLLDEIILKGERDYLFDILE 719
+ A + N+PPHD +A TP+KAY L++II KGE DYL D+LE
Sbjct: 183 AVDKKIEGFVINKDALETAAVYTARNVPPHDPTATTPDKAYPLNKIIFKGEWDYLLDVLE 242
Query: 718 LLHSGIGEKDTFWEENYYPSFVVNRIPKLKEIQDEEEKKKHAFILSYITHLVNFWKLTAS 539
LL SG + YPSFV NRI KL+EIQDE EKK+ A ILSYITHL+ F
Sbjct: 243 LLQSG-----ATISSDAYPSFVCNRIYKLEEIQDEMEKKRLACILSYITHLIKF------ 291
Query: 538 PRQSKSRDIIYGDAINKY-KIPRIIYQKFAKLFLDSVSNVLATDKKGLVIGYILVLTLFA 362
K + + G + KY K P II QKF LF +S + LA DK+ L+I Y+LVLTLF
Sbjct: 292 ----KDQRSVDGASSAKYHKFPPIILQKFLTLFANSETYRLADDKQDLLISYVLVLTLFI 347
Query: 361 DSFCSNPSDIAKDLGMTRSQLRLYFRQLGCKLS 263
D F ++ SDIAKDL MT LRL+++ LGCKLS
Sbjct: 348 DKFSTDMSDIAKDLRMTPVSLRLHYQNLGCKLS 380
>ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Vitis
vinifera]
Length = 421
Score = 330 bits (846), Expect = 2e-87
Identities = 193/415 (46%), Positives = 268/415 (64%), Gaps = 7/415 (1%)
Frame = -2
Query: 1426 KRKKQKKRLHVELSALTDTPDRIAPVVGYFSSGYKPYDSQE-----PPEVRVFRNKNHRL 1262
K++K+KK ++V++ + + P++I P+VGYF SG+ P+ Q+ PP V+VFRNK R
Sbjct: 19 KKRKKKKHVNVKMEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKA-RA 77
Query: 1261 SRLDLVVKPKESNVEFVGKSYEGEAAIPQLCHYALGILDKDTQTLKVVPIAANKIFRLEP 1082
+RL LVV P +S V FVG SY GEAA Q+C YALG+LDK+TQTLK+VPIA+NKIFRLEP
Sbjct: 78 NRLQLVVSPNDSKVNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEP 137
Query: 1081 RVMKS-SSAEEPTEGLEEGLSAVEAGRKISDLTSLYGTKKQRNMDKKFRSLVEQTNDPSA 905
RV S +S +EP+ L+ +A E ++ DLT+LYGTKK KK ++L Q +DP +
Sbjct: 138 RVGGSDASVDEPSSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQAL-NQKDDPRS 196
Query: 904 RENLXXXXXXXXXXXXAFKDTNGTAGPNIPPHDLSAVTPEKAYLLDEIILKGERDYLFDI 725
+++L A + T+ + NIPP+D +A TP++AY LD+II KGE DYL DI
Sbjct: 197 QKDLDRKLKEVVINKEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDI 256
Query: 724 LELLHSGIGEKDTFWEENYYPSFVVNRIPKLKEIQDEEEKKKHAFILSYITHLVNFWKLT 545
L+LL +G+ E + Y SFV NRI KLKE++DE EK A I SYI HL+ +
Sbjct: 257 LDLLQAGVEV-----ESSAYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKY---- 307
Query: 544 ASPRQSKSRDIIYGDAINKYKIPRIIYQKFAKLF-LDSVSNVLATDKKGLVIGYILVLTL 368
K R+ + + +KIP I+ QKF+ +F LDS S L +KK L+I Y+LVLTL
Sbjct: 308 ------KDRNSMDASSAKHHKIPGILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTL 361
Query: 367 FADSFCSNPSDIAKDLGMTRSQLRLYFRQLGCKLSTDSRFGVHRTEYFWTLHVPL 203
+AD F ++PSDIA+DL M+ +LR +F LGCKL + ++ + TL VPL
Sbjct: 362 YADEFRTDPSDIARDLRMSAVKLRAHFEHLGCKLVSQNKVTMA------TLPVPL 410
>emb|CBI35920.3| unnamed protein product [Vitis vinifera]
Length = 391
Score = 318 bits (814), Expect = 9e-84
Identities = 188/403 (46%), Positives = 257/403 (63%), Gaps = 7/403 (1%)
Frame = -2
Query: 1390 LSALTDTPDRIAPVVGYFSSGYKPYDSQE-----PPEVRVFRNKNHRLSRLDLVVKPKES 1226
+ + + P++I P+VGYF SG+ P+ Q+ PP V+VFRNK R +RL LVV P +S
Sbjct: 1 MEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKA-RANRLQLVVSPNDS 59
Query: 1225 NVEFVGKSYEGEAAIPQLCHYALGILDKDTQTLKVVPIAANKIFRLEPRVMKS-SSAEEP 1049
V FVG SY GEAA Q+C YALG+LDK+TQTLK+VPIA+NKIFRLEPRV S +S +EP
Sbjct: 60 KVNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSDASVDEP 119
Query: 1048 TEGLEEGLSAVEAGRKISDLTSLYGTKKQRNMDKKFRSLVEQTNDPSARENLXXXXXXXX 869
+ L+ +A E ++ DLT+LYGTKK KK ++L Q +DP ++++L
Sbjct: 120 SSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQAL-NQKDDPRSQKDLDRKLKEVV 178
Query: 868 XXXXAFKDTNGTAGPNIPPHDLSAVTPEKAYLLDEIILKGERDYLFDILELLHSGIGEKD 689
A + T+ + NIPP+D +A TP++AY LD+II KGE DYL DIL+LL +G+
Sbjct: 179 INKEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGVEV-- 236
Query: 688 TFWEENYYPSFVVNRIPKLKEIQDEEEKKKHAFILSYITHLVNFWKLTASPRQSKSRDII 509
E + Y SFV NRI KLKE++DE EK A I SYI HL+ + K R+ +
Sbjct: 237 ---ESSAYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKY----------KDRNSM 283
Query: 508 YGDAINKYKIPRIIYQKFAKLF-LDSVSNVLATDKKGLVIGYILVLTLFADSFCSNPSDI 332
+ +KIP I+ QKF+ +F LDS S L +KK L+I Y+LVLTL+AD F ++PSDI
Sbjct: 284 DASSAKHHKIPGILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDI 343
Query: 331 AKDLGMTRSQLRLYFRQLGCKLSTDSRFGVHRTEYFWTLHVPL 203
A+DL M+ +LR +F LGCKL + ++ + TL VPL
Sbjct: 344 ARDLRMSAVKLRAHFEHLGCKLVSQNKVTMA------TLPVPL 380
>ref|XP_006426597.1| hypothetical protein CICLE_v10025597mg [Citrus clementina]
gi|557528587|gb|ESR39837.1| hypothetical protein
CICLE_v10025597mg [Citrus clementina]
Length = 447
Score = 301 bits (770), Expect = 1e-78
Identities = 188/446 (42%), Positives = 264/446 (59%), Gaps = 25/446 (5%)
Frame = -2
Query: 1462 ADSDNEVENRMEKRKKQKK------------------RLHVELSALTDTPDRIAPVVGYF 1337
+ + E E +K KK+KK R+ ++ + + P++ P+VGYF
Sbjct: 15 SQQEQETEGPKKKNKKRKKDKANTTIDEQPEPELEPERVKAKVQFIPEQPNKAPPLVGYF 74
Query: 1336 SSGYKPY----DSQEPPEVRVFRNKN---HRLSRLDLVVKPKESNVEFVGKSYEGEAAIP 1178
S YKP D + P+VRV+RN N +R R++LVV P++S+V++VG SY GEA P
Sbjct: 75 PSIYKPDVDHPDEEMRPKVRVYRNMNEKKNRTGRMELVVSPRDSSVDYVGTSYSGEAMAP 134
Query: 1177 QLCHYALGILDKDTQTLKVVPIAANKIFRLEPRVMKSSSAEEPTEGLEEGLSAVEAGRKI 998
Q CHYA+G+LD++TQTLK+VPIAANKIFRLEPRV S A++ G E + V+A K
Sbjct: 135 QFCHYAVGVLDRNTQTLKIVPIAANKIFRLEPRVRGSDVADKDA-GKGEISAEVQANMK- 192
Query: 997 SDLTSLYGTKKQRNMDKKFRSLVEQTNDPSARENLXXXXXXXXXXXXAFKDTNGTAGPNI 818
+ L + YGTKK KK +L + NDP ++++L A + T N+
Sbjct: 193 AMLDTRYGTKKSLRQSKKMHAL-NKENDPESQKDLALKMKSVKINKEALESTTSDTVLNV 251
Query: 817 PPHDLSAVTPEKAYLLDEIILKGERDYLFDILELLHSGIGEKDTFWEENYYPSFVVNRIP 638
PP+D +A TP++AY LD+IILKGE D++ DI H G + + YPSFV NRI
Sbjct: 252 PPYDANATTPQQAYPLDKIILKGEWDFVQDIFN--HVSAGSEVI---SDAYPSFVCNRIH 306
Query: 637 KLKEIQDEEEKKKHAFILSYITHLVNFWKLTASPRQSKSRDIIYGDAINKYKIPRIIYQK 458
KL+EIQD+ EK+ A I SYITHLV F + S D G + +++IP+I++QK
Sbjct: 307 KLREIQDDVEKQTLASIFSYITHLVKF-------KDQHSMD--GGASAKQHRIPKILHQK 357
Query: 457 FAKLFLDSVSNVLATDKKGLVIGYILVLTLFADSFCSNPSDIAKDLGMTRSQLRLYFRQL 278
F F D+ S L+ DK L+I Y+LVLTL AD F +NP+DIAKDL M+ +LR +F +L
Sbjct: 358 FLTSFSDAESKRLSDDKIHLLISYVLVLTLHADDFRTNPTDIAKDLRMSEFKLRDHFEKL 417
Query: 277 GCKLSTDSRFGVHRTEYFWTLHVPLK 200
GCKL + + + TL VPL+
Sbjct: 418 GCKLLRE------KNMLYATLPVPLQ 437
>ref|XP_006465974.1| PREDICTED: uncharacterized protein LOC102616137 [Citrus sinensis]
gi|641846247|gb|KDO65131.1| hypothetical protein
CISIN_1g013236mg [Citrus sinensis]
Length = 447
Score = 300 bits (769), Expect = 1e-78
Identities = 188/446 (42%), Positives = 263/446 (58%), Gaps = 25/446 (5%)
Frame = -2
Query: 1462 ADSDNEVENRMEKRKKQKK------------------RLHVELSALTDTPDRIAPVVGYF 1337
+ + E E +K KK+KK R+ ++ + + P++ P+VGYF
Sbjct: 15 SQQEQETEGPKKKNKKRKKDKANTTIDEQPEPELEPERVKAKVQFIPEQPNKAPPLVGYF 74
Query: 1336 SSGYKPY----DSQEPPEVRVFRNKN---HRLSRLDLVVKPKESNVEFVGKSYEGEAAIP 1178
S YKP D + P+VRV+RN N +R R++LVV P++S+V++VG SY GEA P
Sbjct: 75 PSIYKPDVDHPDEEMRPKVRVYRNMNEKKNRTGRMELVVSPRDSSVDYVGTSYSGEAMAP 134
Query: 1177 QLCHYALGILDKDTQTLKVVPIAANKIFRLEPRVMKSSSAEEPTEGLEEGLSAVEAGRKI 998
Q CHYA+G+LD+ TQTLK+VPIAANKIFRLEPRV S A++ G E + V+A K
Sbjct: 135 QFCHYAVGVLDRSTQTLKIVPIAANKIFRLEPRVRGSDVADKDA-GKGEISAEVQANMK- 192
Query: 997 SDLTSLYGTKKQRNMDKKFRSLVEQTNDPSARENLXXXXXXXXXXXXAFKDTNGTAGPNI 818
+ L + YGTKK KK +L + NDP ++++L A + T N+
Sbjct: 193 AMLDTRYGTKKSLRQSKKMHAL-NKENDPESQKDLALKMKSVKINKEALESTTSDTVLNV 251
Query: 817 PPHDLSAVTPEKAYLLDEIILKGERDYLFDILELLHSGIGEKDTFWEENYYPSFVVNRIP 638
PP+D +A TP++AY LD+IILKGE D++ DI H G + + YPSFV NRI
Sbjct: 252 PPYDANATTPQQAYPLDKIILKGEWDFVQDIFN--HVSAGSEVI---SDAYPSFVCNRIH 306
Query: 637 KLKEIQDEEEKKKHAFILSYITHLVNFWKLTASPRQSKSRDIIYGDAINKYKIPRIIYQK 458
KL+EIQD+ EK+ A I SYITHLV F + S D G + +++IP+I++QK
Sbjct: 307 KLREIQDDVEKQTLASIFSYITHLVKF-------KDQHSMD--GGASAKQHRIPKILHQK 357
Query: 457 FAKLFLDSVSNVLATDKKGLVIGYILVLTLFADSFCSNPSDIAKDLGMTRSQLRLYFRQL 278
F F D+ S L+ DK L+I Y+LVLTL AD F +NP+DIAKDL M+ +LR +F +L
Sbjct: 358 FLTSFSDAESKRLSDDKIHLLISYVLVLTLHADDFRTNPTDIAKDLRMSEFKLRDHFEKL 417
Query: 277 GCKLSTDSRFGVHRTEYFWTLHVPLK 200
GCKL + + + TL VPL+
Sbjct: 418 GCKLLRE------KNMLYATLPVPLQ 437
>ref|XP_010062676.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Eucalyptus
grandis] gi|629104338|gb|KCW69807.1| hypothetical protein
EUGRSUZ_F03167 [Eucalyptus grandis]
Length = 415
Score = 298 bits (764), Expect = 6e-78
Identities = 183/422 (43%), Positives = 253/422 (59%), Gaps = 8/422 (1%)
Frame = -2
Query: 1429 EKRKKQKKRLHVELSALTDTPDRIAPVVGYFSSGYKPY--------DSQEPPEVRVFRNK 1274
+++K+ +++L + AL D+ D+I P+VGYF SG+ P D E P VRV+RN
Sbjct: 10 KRKKRPREKLSATIHALPDSADKIPPLVGYFPSGFDPSSGGGGGGGDPPEEPGVRVYRNG 69
Query: 1273 NHRLSRLDLVVKPKESNVEFVGKSYEGEAAIPQLCHYALGILDKDTQTLKVVPIAANKIF 1094
+RL LVV+P ESNV FVG S GE Q C YALG+LDK++QTLKVVPIA NKIF
Sbjct: 70 KWP-NRLQLVVRPPESNVTFVGSSSSGEYTGVQSCTYALGVLDKESQTLKVVPIACNKIF 128
Query: 1093 RLEPRVMKSSSAEEPTEGLEEGLSAVEAGRKISDLTSLYGTKKQRNMDKKFRSLVEQTND 914
RLEPRV EEP E +SA E K+ +L L+GTK+ DKK +SL Q +D
Sbjct: 129 RLEPRVASDLPEEEPPELGRGEISAKEKADKVRELNLLFGTKRSVTQDKKMQSL-RQEDD 187
Query: 913 PSARENLXXXXXXXXXXXXAFKDTNGTAGPNIPPHDLSAVTPEKAYLLDEIILKGERDYL 734
P+++++L A + T+ NIPP++ SA P+ AY L++IILKGE DY+
Sbjct: 188 PNSQKDLDRKIKEVAINKEALESTDAHIARNIPPYNSSATVPKDAYPLEKIILKGEWDYI 247
Query: 733 FDILELLHSGIGEKDTFWEENYYPSFVVNRIPKLKEIQDEEEKKKHAFILSYITHLVNFW 554
DI + L G+K + + YP+FV NRI KL E+QDE EK+ ILSYI HL+ F
Sbjct: 248 KDIFQFLEE--GQKVS---PDAYPTFVCNRIHKLGEMQDEMEKETLGCILSYINHLIKFK 302
Query: 553 KLTASPRQSKSRDIIYGDAINKYKIPRIIYQKFAKLFLDSVSNVLATDKKGLVIGYILVL 374
++ S S++ +KIP I+ QKF+ +F ++ S L ++K L+I Y+LVL
Sbjct: 303 DQHSADGASSSKN---------HKIPSILRQKFSTMFSNAESKWLPSEKIDLLISYVLVL 353
Query: 373 TLFADSFCSNPSDIAKDLGMTRSQLRLYFRQLGCKLSTDSRFGVHRTEYFWTLHVPLKSA 194
TLFAD F ++P+DIAKDL M+ +R +F LGCK S + + + L VPLK
Sbjct: 354 TLFADDFRTDPTDIAKDLRMSSVTIRQHFEHLGCKFSRE------KNVLYAKLPVPLKFP 407
Query: 193 DL 188
+L
Sbjct: 408 EL 409
>ref|XP_010087702.1| DNA-directed RNA polymerase I subunit rpa49 [Morus notabilis]
gi|587839011|gb|EXB29690.1| DNA-directed RNA polymerase I
subunit rpa49 [Morus notabilis]
Length = 438
Score = 292 bits (748), Expect = 4e-76
Identities = 176/420 (41%), Positives = 250/420 (59%), Gaps = 6/420 (1%)
Frame = -2
Query: 1429 EKRKKQKKRLHVELSALTDTPDRIAPVVGYFSSGYKPYDSQEPPEV----RVFRNKNHRL 1262
+ +KK+K ++ + + + P+R P+VGYF SG+ P D + RVFRN+N +
Sbjct: 34 KSKKKRKNKVEATIQVVQNQPERAPPLVGYFPSGFDPKDGDDESSATAMARVFRNRN-KP 92
Query: 1261 SRLDLVVKPKESNVEFVGKSYEGEA-AIPQLCHYALGILDKDTQTLKVVPIAANKIFRLE 1085
RL LVV P +NV+FVG +Y GEA A Q C+YALG+LDK+TQTLK+VPIA+NKIFRLE
Sbjct: 93 KRLQLVVSPNGANVDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLE 152
Query: 1084 PRVMKSSSAEEPTEGLEEG-LSAVEAGRKISDLTSLYGTKKQRNMDKKFRSLVEQTNDPS 908
P+V + + L EG SA+ KI LT YGT K KK R + Q +DP
Sbjct: 153 PKVRGLRLPNKDSGSLAEGERSALSKSEKIKGLTDRYGTNKSIREAKK-RDALYQNDDPE 211
Query: 907 ARENLXXXXXXXXXXXXAFKDTNGTAGPNIPPHDLSAVTPEKAYLLDEIILKGERDYLFD 728
++++ A + T NIPP++ +A + ++AY +++IILKGE D+L D
Sbjct: 212 TQKDMDEKIKQIVIKKDALESTQVHTDRNIPPYNAAATSSQEAYPIEKIILKGEWDFLED 271
Query: 727 ILELLHSGIGEKDTFWEENYYPSFVVNRIPKLKEIQDEEEKKKHAFILSYITHLVNFWKL 548
I LL +++ + + YPSF+ NRI L+E +DEEEKK+ A I SYITHL+ F L
Sbjct: 272 IYRLL-----QEEAELKSDDYPSFISNRIQNLRETEDEEEKKRRACIFSYITHLIKFKDL 326
Query: 547 TASPRQSKSRDIIYGDAINKYKIPRIIYQKFAKLFLDSVSNVLATDKKGLVIGYILVLTL 368
+ S ++ ++K P I+ QKF+ +FL S LA+ + L+I Y+LVLTL
Sbjct: 327 HSMDGVSSAK---------RHKFPSILRQKFSAMFLSSEVKKLASKENDLLISYVLVLTL 377
Query: 367 FADSFCSNPSDIAKDLGMTRSQLRLYFRQLGCKLSTDSRFGVHRTEYFWTLHVPLKSADL 188
+AD F +N +DIAKDL MT LR+++ QLGCKL + +F TL VPL+ DL
Sbjct: 378 YADRFQTNLTDIAKDLRMTSVTLRVHYEQLGCKLVRQNNL------WFATLPVPLQFPDL 431
>gb|EMT03118.1| DNA-directed RNA polymerase I subunit rpa49 [Aegilops tauschii]
Length = 421
Score = 290 bits (743), Expect = 2e-75
Identities = 177/411 (43%), Positives = 238/411 (57%), Gaps = 1/411 (0%)
Frame = -2
Query: 1429 EKRKKQKKRLHVELSALTDTPDRIAPVVGYFSSGYKPYDSQEPPEVRVFRNKNHRLSRLD 1250
+K++ KKR +E++ P APVVGYF +GY P + EPP VR+FR++ H +R++
Sbjct: 16 KKKRHSKKRKAIEVTVDASFPGAAAPVVGYFPTGYDPLAAAEPPRVRLFRHEKHH-NRVE 74
Query: 1249 LVVKPKESNVEFVGKSYEGEAAIPQLCHYALGILDKDTQTLKVVPIAANKIFRLEPRVMK 1070
LVV +FVG+SY GEAA PQLC YALG+LDK T TLK+VPIA+NKI RLEP
Sbjct: 75 LVVGAPGGGPDFVGRSYAGEAAAPQLCGYALGVLDKATGTLKIVPIASNKILRLEPHFEA 134
Query: 1069 SSSAEEPTEGLEEGLSAVEAGRKISDLTSLYGTKKQRNMDKKFRSLVEQTNDPSARENLX 890
A E G S + DLT YGTKK ++ D K++SL EQ NDPSA +L
Sbjct: 135 QQPAHSQQSAAEAGSSVADTELNRQDLTQAYGTKKDKDKDNKWKSLKEQRNDPSAYLDLD 194
Query: 889 XXXXXXXXXXXAFKDTNGTAGPNIPPHDLSAVTPEKAYLLDEIILKGERDYLFDILELLH 710
+ + NIPP+D +A T EKAYL DEII K R +L DI+
Sbjct: 195 LGESKTTADATDSEAS--VEVRNIPPYDPAADTSEKAYLFDEIIPKNIRPHLLDIVGHFE 252
Query: 709 SG-IGEKDTFWEENYYPSFVVNRIPKLKEIQDEEEKKKHAFILSYITHLVNFWKLTASPR 533
SG G K Y SFV NR+ KL+E+Q E++++ A+ILSYITHL++ +S
Sbjct: 253 SGEFGLKG-------YGSFVSNRVNKLQELQGEDQERL-AWILSYITHLLSLLARNSSMS 304
Query: 532 QSKSRDIIYGDAINKYKIPRIIYQKFAKLFLDSVSNVLATDKKGLVIGYILVLTLFADSF 353
+ K ++ I IP+ +++K +F + S+ L+T+K L++ YILVLTLFAD F
Sbjct: 305 KQKRKE--KDQTIRGPMIPQAVHRKLLLMFTEPGSSSLSTEKHELLVNYILVLTLFADDF 362
Query: 352 CSNPSDIAKDLGMTRSQLRLYFRQLGCKLSTDSRFGVHRTEYFWTLHVPLK 200
S P+DI DL M R L+ Y+ QLGCK + F +F TL PLK
Sbjct: 363 RSEPTDICVDLKMNRQMLKPYYDQLGCKSVSTGAF----KPFFMTLPAPLK 409
>ref|XP_009769327.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like isoform
X1 [Nicotiana sylvestris]
Length = 446
Score = 290 bits (741), Expect = 3e-75
Identities = 179/418 (42%), Positives = 250/418 (59%), Gaps = 1/418 (0%)
Frame = -2
Query: 1450 NEVENRMEKRKKQKKRLHVELSALTDTPDRIAPVVGYFSSGYKPYDSQEPPEVRVFRNKN 1271
++V++ K+KK++K+L V + + ++P++ +P+VGYFSSGY P + + +++RN
Sbjct: 42 DKVKSDNTKKKKKEKQLAVTIETIAESPNKTSPIVGYFSSGYDPLRNNDS-NAQLYRNVK 100
Query: 1270 HRLSRLDLVVKPKESNVEFVGKSYEGEAAIPQLCHYALGILDKDTQTLKVVPIAANKIFR 1091
R +RL LVV P + V+FVG +Y GEA QLC Y+LG+LDK+TQTLK+VPIAANKI R
Sbjct: 101 -RNNRLQLVVSPNGAPVDFVGTNYSGEATSAQLCTYSLGVLDKETQTLKIVPIAANKIIR 159
Query: 1090 LEPRVMKSSSAE-EPTEGLEEGLSAVEAGRKISDLTSLYGTKKQRNMDKKFRSLVEQTND 914
LEPRV S + E E + +++ L+A E K+ +LT +Y +KK +K SL +Q +
Sbjct: 160 LEPRVRGSDAPENEDPDTVKQELTAEERTDKMRELTQMYSSKKSIRQARKLDSLRQQEDT 219
Query: 913 PSARENLXXXXXXXXXXXXAFKDTNGTAGPNIPPHDLSAVTPEKAYLLDEIILKGERDYL 734
+ E T A NIPPHDL+A PE AY L+ IIL+GE DYL
Sbjct: 220 GNQEEFDRNIAGAINKEALEVAVTTDNA-RNIPPHDLAATAPELAYPLNRIILEGEWDYL 278
Query: 733 FDILELLHSGIGEKDTFWEENYYPSFVVNRIPKLKEIQDEEEKKKHAFILSYITHLVNFW 554
D+L+L +G K + YPSFV NR KL+ IQ+EEEK++ A ILSYITHLV F
Sbjct: 279 LDVLKLTEAGAEMK-----PDLYPSFVCNRSYKLEHIQNEEEKRRLAGILSYITHLVKF- 332
Query: 553 KLTASPRQSKSRDIIYGDAINKYKIPRIIYQKFAKLFLDSVSNVLATDKKGLVIGYILVL 374
+ S D + + +KIP +++QKF+ +F S + +KK L+I Y+LVL
Sbjct: 333 ------KDKHSMDGV--SSAKHHKIPGMLFQKFSSMFAVPDSKRIPDEKKALLINYVLVL 384
Query: 373 TLFADSFCSNPSDIAKDLGMTRSQLRLYFRQLGCKLSTDSRFGVHRTEYFWTLHVPLK 200
TLF D F S+ SDIAKDL M LR ++ LGCKL + TL VPLK
Sbjct: 385 TLFVDDFRSDLSDIAKDLRMDIGALRPHYEYLGCKLVREKHV------LLATLPVPLK 436
>ref|XP_012068922.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 isoform X1
[Jatropha curcas] gi|802577298|ref|XP_012068923.1|
PREDICTED: DNA-directed RNA polymerase I subunit rpa49
isoform X1 [Jatropha curcas]
Length = 466
Score = 288 bits (738), Expect = 6e-75
Identities = 182/425 (42%), Positives = 245/425 (57%), Gaps = 20/425 (4%)
Frame = -2
Query: 1414 QKKRLHVELSALTDTPDRIAPVVGYFSSGYKPYDSQE-----PPEVRVFRN--------- 1277
+++ + V++ A+ D DR AP+VGYF SGYKP ++E VR +R+
Sbjct: 51 EQQSVDVKVEAIYDRADRSAPIVGYFPSGYKPQKNEENLSPQQSTVRFYRSTRAKMEKSS 110
Query: 1276 -----KNHRLSRLDLVVKPKESNVEFVGKSYEGEAAIPQLCHYALGILDKDTQTLKVVPI 1112
K RL+LVV P SNV+FVGKSY+GEA QLC YALG+ DK TQTLK+VPI
Sbjct: 111 SEKDEKRRTSERLELVVSPHWSNVDFVGKSYKGEAMAAQLCTYALGVFDKMTQTLKIVPI 170
Query: 1111 AANKIFRLEPRVMKSSSAEEPTEGLEEGLSAVEAGRKISDLTSLYGTKKQRNMDKKFRSL 932
A NKIFRLEP+V +A+E LE S K +L LYGTK+ DKK ++L
Sbjct: 171 AGNKIFRLEPKVRGLDTADEEPSVLENEPSGENRTDKRRELAVLYGTKRSIAGDKKLQAL 230
Query: 931 VEQTNDPSARENLXXXXXXXXXXXXAFKDTNGTAGPNIPPHDLSAVTPEKAYLLDEIILK 752
Q ++P ++E+L A T+ NIPP++ SA TP++AY L+ IIL
Sbjct: 231 -RQGDNPESQEDLGNKIDNIVVNKEALASTSAQVARNIPPYNSSATTPQEAYPLNGIILA 289
Query: 751 GERDYLFDILELLHSGIGEKDTFWEENYYPSFVVNRIPKLKEIQDEEEKKKHAFILSYIT 572
GE D+L D+ E+L +G G N YP+FV NRI KL+EIQDE EKK + I SYIT
Sbjct: 290 GEWDFLEDVYEILKTGAGV-----SSNAYPTFVRNRIHKLQEIQDEVEKKTLSRIFSYIT 344
Query: 571 HLVNFWKLTASPRQSKSRDIIYGDAINKYKIPRIIYQKFAKLFLDSVSNVLATDKKGLVI 392
HL+ F + + + +++ ++ P I+ QKF +F S L +K L+I
Sbjct: 345 HLIKFKDMHSLDGAASAKN---------HRFPSILRQKFMNMFTPG-SRTLPIEKIDLLI 394
Query: 391 GYILVLTLFADSFCSNPSDIAKDLGMTRSQLRLYFRQLGCKLSTDSRFGVHRTEYF-WTL 215
Y+LVLTL+ D F SNP+DIAKDL M+ LR++F LGCK GV+ + F TL
Sbjct: 395 SYVLVLTLYVDDFRSNPTDIAKDLRMSPVDLRVHFENLGCK-------GVNENKSFVATL 447
Query: 214 HVPLK 200
VPLK
Sbjct: 448 PVPLK 452
>ref|XP_012068924.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 isoform X2
[Jatropha curcas] gi|643733893|gb|KDP40736.1|
hypothetical protein JCGZ_24735 [Jatropha curcas]
Length = 458
Score = 288 bits (738), Expect = 6e-75
Identities = 182/425 (42%), Positives = 245/425 (57%), Gaps = 20/425 (4%)
Frame = -2
Query: 1414 QKKRLHVELSALTDTPDRIAPVVGYFSSGYKPYDSQE-----PPEVRVFRN--------- 1277
+++ + V++ A+ D DR AP+VGYF SGYKP ++E VR +R+
Sbjct: 43 EQQSVDVKVEAIYDRADRSAPIVGYFPSGYKPQKNEENLSPQQSTVRFYRSTRAKMEKSS 102
Query: 1276 -----KNHRLSRLDLVVKPKESNVEFVGKSYEGEAAIPQLCHYALGILDKDTQTLKVVPI 1112
K RL+LVV P SNV+FVGKSY+GEA QLC YALG+ DK TQTLK+VPI
Sbjct: 103 SEKDEKRRTSERLELVVSPHWSNVDFVGKSYKGEAMAAQLCTYALGVFDKMTQTLKIVPI 162
Query: 1111 AANKIFRLEPRVMKSSSAEEPTEGLEEGLSAVEAGRKISDLTSLYGTKKQRNMDKKFRSL 932
A NKIFRLEP+V +A+E LE S K +L LYGTK+ DKK ++L
Sbjct: 163 AGNKIFRLEPKVRGLDTADEEPSVLENEPSGENRTDKRRELAVLYGTKRSIAGDKKLQAL 222
Query: 931 VEQTNDPSARENLXXXXXXXXXXXXAFKDTNGTAGPNIPPHDLSAVTPEKAYLLDEIILK 752
Q ++P ++E+L A T+ NIPP++ SA TP++AY L+ IIL
Sbjct: 223 -RQGDNPESQEDLGNKIDNIVVNKEALASTSAQVARNIPPYNSSATTPQEAYPLNGIILA 281
Query: 751 GERDYLFDILELLHSGIGEKDTFWEENYYPSFVVNRIPKLKEIQDEEEKKKHAFILSYIT 572
GE D+L D+ E+L +G G N YP+FV NRI KL+EIQDE EKK + I SYIT
Sbjct: 282 GEWDFLEDVYEILKTGAGV-----SSNAYPTFVRNRIHKLQEIQDEVEKKTLSRIFSYIT 336
Query: 571 HLVNFWKLTASPRQSKSRDIIYGDAINKYKIPRIIYQKFAKLFLDSVSNVLATDKKGLVI 392
HL+ F + + + +++ ++ P I+ QKF +F S L +K L+I
Sbjct: 337 HLIKFKDMHSLDGAASAKN---------HRFPSILRQKFMNMFTPG-SRTLPIEKIDLLI 386
Query: 391 GYILVLTLFADSFCSNPSDIAKDLGMTRSQLRLYFRQLGCKLSTDSRFGVHRTEYF-WTL 215
Y+LVLTL+ D F SNP+DIAKDL M+ LR++F LGCK GV+ + F TL
Sbjct: 387 SYVLVLTLYVDDFRSNPTDIAKDLRMSPVDLRVHFENLGCK-------GVNENKSFVATL 439
Query: 214 HVPLK 200
VPLK
Sbjct: 440 PVPLK 444
>ref|XP_009620774.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Nicotiana
tomentosiformis]
Length = 442
Score = 288 bits (736), Expect = 1e-74
Identities = 178/411 (43%), Positives = 243/411 (59%), Gaps = 1/411 (0%)
Frame = -2
Query: 1429 EKRKKQKKRLHVELSALTDTPDRIAPVVGYFSSGYKPYDSQEPPEVRVFRNKNHRLSRLD 1250
+K+KK++K+L V + + + P++ +P+VGYFSSGY P + +++RN R +RL
Sbjct: 45 KKKKKKEKQLAVTIETIAENPNKTSPIVGYFSSGYDPLRNNNN-SAQLYRNVK-RNNRLQ 102
Query: 1249 LVVKPKESNVEFVGKSYEGEAAIPQLCHYALGILDKDTQTLKVVPIAANKIFRLEPRVMK 1070
LVV P + V+FVG +Y GEA QLC Y+LG+LDK+TQTLK+VPIAANKI RLEPRV
Sbjct: 103 LVVSPNGAQVDFVGTNYSGEATSAQLCTYSLGVLDKETQTLKIVPIAANKIIRLEPRVRG 162
Query: 1069 SSSAE-EPTEGLEEGLSAVEAGRKISDLTSLYGTKKQRNMDKKFRSLVEQTNDPSARENL 893
S E E + +++ L+A E K+ +LT +Y +KK +K SL +Q + + E
Sbjct: 163 SDVPENEDPDTVKQELTAEERNDKMRELTQMYSSKKSIRQARKLDSLRQQEDTGNQEEFD 222
Query: 892 XXXXXXXXXXXXAFKDTNGTAGPNIPPHDLSAVTPEKAYLLDEIILKGERDYLFDILELL 713
T A NIPPHDL+A P+ AY L+ IIL+GE DYL D+L+L
Sbjct: 223 RNIAGAINKEALEVAITTDNA-RNIPPHDLAATVPQLAYPLNRIILEGEWDYLLDVLKLT 281
Query: 712 HSGIGEKDTFWEENYYPSFVVNRIPKLKEIQDEEEKKKHAFILSYITHLVNFWKLTASPR 533
+G K + YPSFV NR KL+ IQ+EEEK++ A ILSYITHLV F +
Sbjct: 282 EAGAEMK-----PDLYPSFVCNRSYKLEHIQNEEEKRRLAGILSYITHLVKF-------K 329
Query: 532 QSKSRDIIYGDAINKYKIPRIIYQKFAKLFLDSVSNVLATDKKGLVIGYILVLTLFADSF 353
S D + + +KIP +++QKF+ +F S L +KK L+I Y+LVLTLF D F
Sbjct: 330 DKHSMDGV--SSAKHHKIPGMLFQKFSSMFAVPDSKRLPEEKKSLLINYVLVLTLFVDDF 387
Query: 352 CSNPSDIAKDLGMTRSQLRLYFRQLGCKLSTDSRFGVHRTEYFWTLHVPLK 200
S+ SDIAKDL M LR ++ LGCKL + TL VPLK
Sbjct: 388 RSDLSDIAKDLRMNIGTLRPHYEYLGCKLVREKHV------LLATLPVPLK 432
>ref|XP_007039490.1| DNA-directed RNA polymerase I subunit rpa49, putative [Theobroma
cacao] gi|508776735|gb|EOY23991.1| DNA-directed RNA
polymerase I subunit rpa49, putative [Theobroma cacao]
Length = 457
Score = 286 bits (731), Expect = 4e-74
Identities = 175/438 (39%), Positives = 248/438 (56%), Gaps = 23/438 (5%)
Frame = -2
Query: 1444 VENRMEKRKKQKKRLHVELSALTDTPDRIAPVVGYFSSGYKPY----------------- 1316
+E + +K+ V++ D P++I P+V YF SGY P
Sbjct: 29 IEPMSQNLGAKKENFQVKIQLFQDQPNKIPPLVAYFPSGYNPCKTDPQTRQGEEEEEEEE 88
Query: 1315 ----DSQEPPEVRVFRNKNHR-LSRLDLVVKPKESNVEFVGKSYEGEAAIPQLCHYALGI 1151
+ P V+V+RN R +RL +VV P SNV+FVG +Y GEAA Q+C Y+LG+
Sbjct: 89 EGPDNKSNQPRVKVYRNMAQRKTNRLQVVVSPSGSNVDFVGSNYSGEAAAAQVCRYSLGV 148
Query: 1150 LDKDTQTLKVVPIAANKIFRLEPRVMKSSSA-EEPTEGLEEGLSAVEAGRKISDLTSLYG 974
LD++T+TLK++PIA+NKIFRLEPRV S +A ++ + ++ L+ + K+ +LT+LYG
Sbjct: 149 LDRETRTLKIIPIASNKIFRLEPRVRSSETANKDVSSSVKSELTTEDKEDKMGELTALYG 208
Query: 973 TKKQRNMDKKFRSLVEQTNDPSARENLXXXXXXXXXXXXAFKDTNGTAGPNIPPHDLSAV 794
TKK R K +L ++ DP ++++L A +T+ NIPPHD SA
Sbjct: 209 TKKDRKKRKDLNNLKKEV-DPESQKSLDEKIEQVAFNKEALGNTSALVARNIPPHDSSAT 267
Query: 793 TPEKAYLLDEIILKGERDYLFDILELLHSGIGEKDTFWEENYYPSFVVNRIPKLKEIQDE 614
TP +AY LD+IILKG+ ++L DI LL G N YP+FV NRI KL+ IQDE
Sbjct: 268 TPVEAYPLDKIILKGDWEFLGDIYGLLEVGAEV-----ASNAYPTFVCNRINKLEGIQDE 322
Query: 613 EEKKKHAFILSYITHLVNFWKLTASPRQSKSRDIIYGDAINKYKIPRIIYQKFAKLFLDS 434
EK+K + + S+ITHLV F + R + ++ +KIP II Q+F +F D
Sbjct: 323 TEKRKLSCVFSFITHLVKFNDQFSMDRVASAKG---------HKIPSIIRQRFFTMFTDP 373
Query: 433 VSNVLATDKKGLVIGYILVLTLFADSFCSNPSDIAKDLGMTRSQLRLYFRQLGCKLSTDS 254
+ D+ L+I Y+LVLTL AD F ++PSDIAKDL M+ LR +F LGCKL ++
Sbjct: 374 GLRKPSRDQINLLISYVLVLTLHADGFRTDPSDIAKDLRMSSIGLRPHFENLGCKLVREN 433
Query: 253 RFGVHRTEYFWTLHVPLK 200
F TL VPLK
Sbjct: 434 ------NSIFTTLPVPLK 445
>dbj|BAJ90975.1| predicted protein, partial [Hordeum vulgare subsp. vulgare]
Length = 431
Score = 285 bits (729), Expect = 6e-74
Identities = 178/414 (42%), Positives = 236/414 (57%), Gaps = 4/414 (0%)
Frame = -2
Query: 1429 EKRKKQKKRLHVELSALTDTPDRIAPVVGYFSSGYKPYDSQEPPEVRVFRNKNHRLSRLD 1250
+K+K KKR +E++ P APVVGYF +GY P + +PP R+FR++ H +R++
Sbjct: 27 KKKKHSKKRKAIEVTVDASFPGAAAPVVGYFPTGYDPLAAADPPRARLFRHEKHH-NRVE 85
Query: 1249 LVVKPKESNVEFVGKSYEGEAAIPQLCHYALGILDKDTQTLKVVPIAANKIFRLEPRVMK 1070
LVV +FVG+SY GEAA PQLC YALG+LDK T TLK+VPIA+NKI RLEP
Sbjct: 86 LVVDAPGGGPDFVGRSYAGEAAAPQLCGYALGVLDKATGTLKIVPIASNKILRLEPHFEV 145
Query: 1069 SSSAEEPTEGLEEGLSAVEAGRKISDLTSLYGTKKQRNMDKKFRSLVEQTNDPSARENLX 890
A E S + DLT YGTKK ++ D K++SL EQ NDPSA +L
Sbjct: 146 QQPAHSQQSAAEACSSVADTELNRQDLTQAYGTKKDKDKDNKWKSLKEQRNDPSAYLDLD 205
Query: 889 XXXXXXXXXXXAFKDTNGTAG---PNIPPHDLSAVTPEKAYLLDEIILKGERDYLFDILE 719
T+ A NIPP+D +A T EKAYL DEII K R +L DI+
Sbjct: 206 LGESKTADA------TDSQASMEVRNIPPYDPAADTSEKAYLFDEIIPKNIRPHLLDIVG 259
Query: 718 LLHSG-IGEKDTFWEENYYPSFVVNRIPKLKEIQDEEEKKKHAFILSYITHLVNFWKLTA 542
SG G K Y SFV NR+ KL E+Q E++++ A+ILSYITHL++ +
Sbjct: 260 HFESGEFGLKG-------YGSFVSNRVNKLHELQGEDQERL-AWILSYITHLLSLLARNS 311
Query: 541 SPRQSKSRDIIYGDAINKYKIPRIIYQKFAKLFLDSVSNVLATDKKGLVIGYILVLTLFA 362
S + K ++ I IP+ +++K +F + S+ L+T+K L+I YILVLTLFA
Sbjct: 312 SMSKQKRKE--KDQTIRGPMIPQAVHRKLLLMFTEPGSSSLSTEKYELLINYILVLTLFA 369
Query: 361 DSFCSNPSDIAKDLGMTRSQLRLYFRQLGCKLSTDSRFGVHRTEYFWTLHVPLK 200
D F S P+DI DL M R L+ Y+ QLGCK + F +F TL PLK
Sbjct: 370 DDFRSEPTDICADLKMNRQMLKPYYDQLGCKSVSTGAF----KPFFMTLPAPLK 419
>dbj|BAJ94402.1| predicted protein, partial [Hordeum vulgare subsp. vulgare]
gi|326529171|dbj|BAK00979.1| predicted protein, partial
[Hordeum vulgare subsp. vulgare]
Length = 433
Score = 285 bits (729), Expect = 6e-74
Identities = 178/414 (42%), Positives = 236/414 (57%), Gaps = 4/414 (0%)
Frame = -2
Query: 1429 EKRKKQKKRLHVELSALTDTPDRIAPVVGYFSSGYKPYDSQEPPEVRVFRNKNHRLSRLD 1250
+K+K KKR +E++ P APVVGYF +GY P + +PP R+FR++ H +R++
Sbjct: 29 KKKKHSKKRKAIEVTVDASFPGAAAPVVGYFPTGYDPLAAADPPRARLFRHEKHH-NRVE 87
Query: 1249 LVVKPKESNVEFVGKSYEGEAAIPQLCHYALGILDKDTQTLKVVPIAANKIFRLEPRVMK 1070
LVV +FVG+SY GEAA PQLC YALG+LDK T TLK+VPIA+NKI RLEP
Sbjct: 88 LVVDAPGGGPDFVGRSYAGEAAAPQLCGYALGVLDKATGTLKIVPIASNKILRLEPHFEV 147
Query: 1069 SSSAEEPTEGLEEGLSAVEAGRKISDLTSLYGTKKQRNMDKKFRSLVEQTNDPSARENLX 890
A E S + DLT YGTKK ++ D K++SL EQ NDPSA +L
Sbjct: 148 QQPAHSQQSAAEACSSVADTELNRQDLTQAYGTKKDKDKDNKWKSLKEQRNDPSAYLDLD 207
Query: 889 XXXXXXXXXXXAFKDTNGTAG---PNIPPHDLSAVTPEKAYLLDEIILKGERDYLFDILE 719
T+ A NIPP+D +A T EKAYL DEII K R +L DI+
Sbjct: 208 LGESKTADA------TDSQASMEVRNIPPYDPAADTSEKAYLFDEIIPKNIRPHLLDIVG 261
Query: 718 LLHSG-IGEKDTFWEENYYPSFVVNRIPKLKEIQDEEEKKKHAFILSYITHLVNFWKLTA 542
SG G K Y SFV NR+ KL E+Q E++++ A+ILSYITHL++ +
Sbjct: 262 HFESGEFGLKG-------YGSFVSNRVNKLHELQGEDQERL-AWILSYITHLLSLLARNS 313
Query: 541 SPRQSKSRDIIYGDAINKYKIPRIIYQKFAKLFLDSVSNVLATDKKGLVIGYILVLTLFA 362
S + K ++ I IP+ +++K +F + S+ L+T+K L+I YILVLTLFA
Sbjct: 314 SMSKQKRKE--KDQTIRGPMIPQAVHRKLLLMFTEPGSSSLSTEKYELLINYILVLTLFA 371
Query: 361 DSFCSNPSDIAKDLGMTRSQLRLYFRQLGCKLSTDSRFGVHRTEYFWTLHVPLK 200
D F S P+DI DL M R L+ Y+ QLGCK + F +F TL PLK
Sbjct: 372 DDFRSEPTDICADLKMNRQMLKPYYDQLGCKSVSTGAF----KPFFMTLPAPLK 421
>ref|XP_011014273.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Populus
euphratica]
Length = 472
Score = 284 bits (726), Expect = 1e-73
Identities = 177/435 (40%), Positives = 255/435 (58%), Gaps = 30/435 (6%)
Frame = -2
Query: 1414 QKKRLHVELSALTDTPDRIAPVVGYFSSGYKPY------DSQEP-------PEVRVFRN- 1277
++ RL V+L + + D+ PVVGYF SGY P+ D+QEP P V+++RN
Sbjct: 50 EQPRLDVKLELVNNHVDKTPPVVGYFPSGYNPHKTNDINDAQEPNLPLAAPPSVKLYRNA 109
Query: 1276 --------------KNHRLSRLDLVVKPKESNVEFVGKSYEGEAAIPQLCHYALGILDKD 1139
K RL+LVV P SN+EFVG SY+GEA QLC YALG+LDK
Sbjct: 110 QRAKVEKSSGEKNEKGRTSERLELVVSPNGSNIEFVGNSYKGEAMAAQLCTYALGVLDKT 169
Query: 1138 TQTLKVVPIAANKIFRLEPRVMKSSSAEEPTEGLEEG-LSAVEAGRKISDLTSLYGTKKQ 962
TQTLK++PIA NKI RLEP++ S +A++ E G ++A + +I L YG KK
Sbjct: 170 TQTLKIMPIAGNKILRLEPKLRGSLAADKEHANFENGEITAEQRAARIRQLNVQYGPKKS 229
Query: 961 RNMDKKFRSLVEQTNDPSARENLXXXXXXXXXXXXAFKDTNGTAGPNIPPHDLSAVTPEK 782
DKK ++L + +DP ++++L A + T+G + NIPP++ SA+TP++
Sbjct: 230 IIQDKKMQAL-RKGDDPLSQKDLGRKIENAPINKDALESTSGHSARNIPPYNSSAITPQE 288
Query: 781 AYLLDEIILKGERDYLFDILELLHSGIGEKDTFWEENYYPSFVVNRIPKLKEIQDEEEKK 602
AY LD IIL GE D+L DI ++L +G GE N YP+FV NRI KL+EIQDE EKK
Sbjct: 289 AYPLDGIILTGEWDFLEDIYKILQAG-GEV----ASNAYPTFVCNRIQKLREIQDEMEKK 343
Query: 601 KHAFILSYITHLVNFWKLTASPRQSKSRDIIYGDA-INKYKIPRIIYQKFAKLFLDSVSN 425
+ + I SYITHL+ F K + + G A ++ P II QKF ++F + +
Sbjct: 344 RLSCIFSYITHLIKF----------KDQHSLDGAASARNHQFPSIIRQKFLEMF-NPETR 392
Query: 424 VLATDKKGLVIGYILVLTLFADSFCSNPSDIAKDLGMTRSQLRLYFRQLGCKLSTDSRFG 245
L+ +K L+I Y+LVLTL+AD F + P+D++ DL M + ++ ++R LGCK+ +
Sbjct: 393 RLSVEKIDLLISYVLVLTLYADDFRTFPADVSNDLRMNPATVKSHYRNLGCKMERE---- 448
Query: 244 VHRTEYFWTLHVPLK 200
+ +Y TL VPL+
Sbjct: 449 --KNKYLVTLSVPLE 461
>ref|XP_006369274.1| hypothetical protein POPTR_0001s20580g [Populus trichocarpa]
gi|550347732|gb|ERP65843.1| hypothetical protein
POPTR_0001s20580g [Populus trichocarpa]
Length = 472
Score = 283 bits (725), Expect = 2e-73
Identities = 177/434 (40%), Positives = 252/434 (58%), Gaps = 29/434 (6%)
Frame = -2
Query: 1414 QKKRLHVELSALTDTPDRIAPVVGYFSSGYKPY------DSQEP-------PEVRVFRN- 1277
++ RL V+L + + D+ PVVGYF SGY P+ D+QEP P V+++RN
Sbjct: 50 EQPRLDVKLELVNNQVDKTPPVVGYFPSGYNPHKTNDINDAQEPILPLAAPPSVKLYRNA 109
Query: 1276 --------------KNHRLSRLDLVVKPKESNVEFVGKSYEGEAAIPQLCHYALGILDKD 1139
K RL+LVV P SNVEFVG SY+GEA QLC YALG+LDK
Sbjct: 110 QRAKVEKSSGEKNEKGRTSERLELVVSPNGSNVEFVGNSYKGEAMAAQLCTYALGVLDKA 169
Query: 1138 TQTLKVVPIAANKIFRLEPRVMKSSSAEEPTEGLEEG-LSAVEAGRKISDLTSLYGTKKQ 962
TQTLK++PIA NKI RLEP++ S +A++ E G ++A + +I L YG KK
Sbjct: 170 TQTLKIMPIAGNKILRLEPKLRGSLAADKEHANFENGEITAEQRAARIRQLNVQYGPKKS 229
Query: 961 RNMDKKFRSLVEQTNDPSARENLXXXXXXXXXXXXAFKDTNGTAGPNIPPHDLSAVTPEK 782
DKK ++L + +DP ++++L A + T+G + NIPP++ SA+TP++
Sbjct: 230 IIQDKKMQAL-RKGDDPLSQKDLGRKIENAPINKDALESTSGHSARNIPPYNSSAITPQE 288
Query: 781 AYLLDEIILKGERDYLFDILELLHSGIGEKDTFWEENYYPSFVVNRIPKLKEIQDEEEKK 602
AY LD IIL GE D+L DI ++L G GE N YP+FV NRI KL+EIQDE EKK
Sbjct: 289 AYPLDGIILTGEWDFLEDIYKILQVG-GEV----ASNAYPTFVCNRIQKLREIQDEVEKK 343
Query: 601 KHAFILSYITHLVNFWKLTASPRQSKSRDIIYGDAINKYKIPRIIYQKFAKLFLDSVSNV 422
+ + I SYITHL+ F + + +R+ ++ P II QKF ++F
Sbjct: 344 RLSCIFSYITHLLKFKDQHSMDGAASARN---------HQFPSIIRQKFFEMFKPETRR- 393
Query: 421 LATDKKGLVIGYILVLTLFADSFCSNPSDIAKDLGMTRSQLRLYFRQLGCKLSTDSRFGV 242
L+ DK L+I Y+LVLTL+AD F + P+D++ DL M + ++ ++R LGCK+ +
Sbjct: 394 LSVDKIDLLISYVLVLTLYADDFRTFPADVSNDLRMNPATVKSHYRNLGCKMERE----- 448
Query: 241 HRTEYFWTLHVPLK 200
+ +Y TL VPL+
Sbjct: 449 -KNKYLVTLSVPLE 461