BLASTX nr result
ID: Anemarrhena21_contig00010924
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00010924
(4536 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010929653.1| PREDICTED: RNA polymerase II C-terminal doma... 1194 0.0
ref|XP_008791049.1| PREDICTED: RNA polymerase II C-terminal doma... 1160 0.0
ref|XP_009421039.1| PREDICTED: RNA polymerase II C-terminal doma... 1079 0.0
ref|XP_009386584.1| PREDICTED: RNA polymerase II C-terminal doma... 1069 0.0
ref|XP_010249185.1| PREDICTED: RNA polymerase II C-terminal doma... 1033 0.0
ref|XP_006662962.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera... 976 0.0
ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphat... 965 0.0
ref|XP_012088736.1| PREDICTED: RNA polymerase II C-terminal doma... 940 0.0
ref|XP_008678156.1| PREDICTED: RNA polymerase II C-terminal doma... 934 0.0
gb|AFW60862.1| hypothetical protein ZEAMMB73_799152, partial [Ze... 931 0.0
ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Popu... 921 0.0
ref|XP_010656789.1| PREDICTED: RNA polymerase II C-terminal doma... 920 0.0
ref|XP_011036157.1| PREDICTED: RNA polymerase II C-terminal doma... 919 0.0
ref|XP_010656786.1| PREDICTED: RNA polymerase II C-terminal doma... 917 0.0
ref|XP_010656784.1| PREDICTED: RNA polymerase II C-terminal doma... 912 0.0
ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citr... 911 0.0
gb|KDO83165.1| hypothetical protein CISIN_1g000897mg [Citrus sin... 910 0.0
ref|XP_003577532.1| PREDICTED: RNA polymerase II C-terminal doma... 910 0.0
gb|KDO83166.1| hypothetical protein CISIN_1g000897mg [Citrus sin... 908 0.0
ref|XP_002304714.2| hypothetical protein POPTR_0003s16280g [Popu... 908 0.0
>ref|XP_010929653.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Elaeis guineensis]
Length = 1268
Score = 1194 bits (3088), Expect = 0.0
Identities = 667/1145 (58%), Positives = 783/1145 (68%), Gaps = 63/1145 (5%)
Frame = -3
Query: 3877 IGEFDKRFGXXXXXXXXXXXXXXASSFEEVCSRLQKCFASLKQMFSQGHGPV--LDVLVQ 3704
IGEFD+R SF+ VCSRL++ F LK MF++ PV LD LVQ
Sbjct: 186 IGEFDRRVSLILEELETVTEEEVEKSFDGVCSRLRQSFEMLKPMFAETESPVPVLDALVQ 245
Query: 3703 QAFMGIQTVYSAFSSGNLKKMDQNKELLLRLLIHIKNQYSVFLTPEQVKEIDVRVHALAS 3524
QAF GI+TV+S S NLKK +QNK+LLLRLLIHIKNQYS L+PEQVKEID RV +L
Sbjct: 246 QAFAGIKTVHSVLGSENLKKKEQNKDLLLRLLIHIKNQYSNILSPEQVKEIDTRVQSLVF 305
Query: 3523 ESVSVGKTT------GNVNGSADPAERSGISEEKLRLDPRG--SHVVRNNDGRACLSKLE 3368
E S ++ N N AE+S IS L + + + +A L L+
Sbjct: 306 EDDSYKESKLHAGSGTNTNDKTHLAEKSDISPHSLVSSENSLADSSIGSKNVKAGLPNLD 365
Query: 3367 LPTNSRSRVDFSPLLNLHADYDEDSLPSPTRDNAPPLPVLKPIGFGTGAAARTQLIAPKN 3188
PT SR R+ SPLL+LHA+YDE++LPSPTR+NAPPLP+ KPIGFGTG T+ I PKN
Sbjct: 366 TPTISRGRM-VSPLLDLHAEYDEENLPSPTRENAPPLPIHKPIGFGTGTVVFTEPITPKN 424
Query: 3187 VDTENGTLHPYITDAFKAVSSYQQKYGKNSIIASNRLPSPTPSEDGNDGGDDIHGEVSSS 3008
V+ E+ T HPYITDAFKAVSSYQQKY ASNRLPSPTPSE+GND DD H EVSSS
Sbjct: 425 VEAEDDTPHPYITDAFKAVSSYQQKY----FFASNRLPSPTPSEEGNDK-DDAHDEVSSS 479
Query: 3007 SLAGNVRTVGPSINAANTNSSGSFQMPSVNSTGGFQMPSVNSTGGFQMLSVNSTGGFPMA 2828
S AN N+ VN+T +A
Sbjct: 480 S--------------ANRNAG----------------------------CVNTTSQIQVA 497
Query: 2827 PVNSLAAQMAPINSSAAQMAPVKAVGQVGLEPNHVIKASAKSRDPRLRFMNSEVGNA--- 2657
++ +SS+ Q VK VGQ+G PN + + KSRDPRLRF++SE G+A
Sbjct: 498 TSSAACTD----SSSSHQPGTVKPVGQLGSAPNLATRPALKSRDPRLRFVSSESGSASDP 553
Query: 2656 -----------PQNGIAAGLSNSRKHKTVDDHVPDDHNLKRQKNGSKSSRDVQVTSGRGG 2510
P NG G++N RKHK VD+ +P++H LKRQ+NG +S DVQ+ GRGG
Sbjct: 554 NTQVMSLDSSAPNNGPVGGITNPRKHKAVDESLPENHTLKRQRNGLTNSGDVQMIPGRGG 613
Query: 2509 -WIEDSGSIASQTSNRVQSNKNMAVGNRNTGGEVGCDGRXXXXXXXXXXXXXSVPNMSTG 2333
W++DS ++ SQ S++++ ++NM + +N VG D R + P S+
Sbjct: 614 GWLDDSSAVGSQPSDKIRLSENMEIETKNPVSVVGSDRRPDSNPNIHVSNTGTCPIPSST 673
Query: 2332 AAPV------------VSLPSLLKDIAVNPTMLMQLVKMEQQRIAAEAQQKSAG------ 2207
AAP VS PSLLKDIAVNPTMLMQL++MEQQR++AEAQQK+ G
Sbjct: 674 AAPASSTAPSSSAAASVSFPSLLKDIAVNPTMLMQLIQMEQQRLSAEAQQKTVGLMQNMA 733
Query: 2206 --PAVNGLSNAISSVS-------EAGQNPASKPQMPPQTTSMN---DMGKIRMKPRDPRR 2063
++N LS A+SS + E GQNP +PQ+PPQT S N D+G+IRMKPRDPRR
Sbjct: 734 HASSLNVLSGAVSSATVASMKSTEVGQNPGGRPQVPPQTVSTNSQSDVGRIRMKPRDPRR 793
Query: 2062 ILHXXXXXXXXXXXXEPIKTSGSLSSDAQSSKDHSTVQEQGEQSQAIVLPSQPIVQPDIS 1883
+LH K +G+LSSD QSSKD S + EQGEQ+QA LP+Q
Sbjct: 794 VLHNMVQKNETVVSERA-KPNGTLSSDPQSSKDQSAIGEQGEQAQATTLPTQ-------- 844
Query: 1882 RQFTKNLQNLADLVSNSQASAPSIAGTQNISQPIASKISND--------TTEPKTVPALS 1727
QF KN +NL D+ S Q++ A +Q ISQPI KI+ ++PKT+ A++
Sbjct: 845 -QFAKNTKNLGDISSTLQSTTTPPAASQIISQPIQLKINKVDPRPAAAVVSDPKTLSAVT 903
Query: 1726 NQGGPMSSASQSANPWGDVDHLLDGYDDQQKAAIQKERARRIAEQNKMFAARKXXXXXXX 1547
++G + A+ S NPWGDVDHLLDGYDDQQKAAIQ+ERARRIAEQNKMFAARK
Sbjct: 904 SEGST-TGATPSTNPWGDVDHLLDGYDDQQKAAIQRERARRIAEQNKMFAARKLCLVLDL 962
Query: 1546 XXXXLNSAKFVEVDPIHEEILRKKEEQDKQRPERHLYRIPHMGMWTKLRPGIWNFLEKAS 1367
LNSAKFVEVDP+HEEILRKKEEQD+++P+RHL+R HMGMWTKLRPGIW FLEKAS
Sbjct: 963 DHTLLNSAKFVEVDPVHEEILRKKEEQDREKPQRHLFRFQHMGMWTKLRPGIWTFLEKAS 1022
Query: 1366 QLYELHLYTMGNKLYATEMAKVLDPKGTLFSGRVISRGDDGDPFDGDERVPKSKDLDGVL 1187
+LYE+HLYTMGNKLYATEMAKVLDP GTLF+GRVISRGDDGDPFDGDERVPKSKDLDGVL
Sbjct: 1023 KLYEMHLYTMGNKLYATEMAKVLDPTGTLFAGRVISRGDDGDPFDGDERVPKSKDLDGVL 1082
Query: 1186 GMESAVVIIDDSLRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTL 1007
GMESAVVIIDDS+RVWPHNKLNLIVVERYTYFP SRRQFGL GPSLLEIDHDERPEDGTL
Sbjct: 1083 GMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLFGPSLLEIDHDERPEDGTL 1142
Query: 1006 ASSLAVIERIHRNFFSHHSLNEIDVRNILAAEQRKILAGCKIVFSRVFPVGEANPHLHPL 827
ASSLAVIERIH+NFFSHHSLN+IDVRNILAAEQRKILAGCKIVFSRVFPVGEANPHLHPL
Sbjct: 1143 ASSLAVIERIHQNFFSHHSLNDIDVRNILAAEQRKILAGCKIVFSRVFPVGEANPHLHPL 1202
Query: 826 WQTAEQFGAECTNQIDEQVTHVVANSRGTDKVNWALSTGRFVVYPGWVEASALLYRRANE 647
WQ AEQFGA CTNQIDEQVTHVVANS GTDKVNWALSTGRFVV+PGWVEASALLYRR +E
Sbjct: 1203 WQMAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRVSE 1262
Query: 646 QDFAV 632
DFAV
Sbjct: 1263 HDFAV 1267
Score = 80.5 bits (197), Expect = 1e-11
Identities = 41/59 (69%), Positives = 47/59 (79%)
Frame = -3
Query: 4264 LKEISADDFKQQDARVPSRSGVWMGDLVRYPVHRNYNQDLYSFAWAQAVQNKPLGFDVK 4088
L+EISA+DFKQ DAR P RS VW+G YP+ RNY +LYSFAWAQAVQNKPLG D+K
Sbjct: 48 LEEISAEDFKQ-DARAPPRSKVWVG----YPMSRNYAPNLYSFAWAQAVQNKPLGLDLK 101
>ref|XP_008791049.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Phoenix dactylifera]
Length = 1269
Score = 1160 bits (3002), Expect = 0.0
Identities = 663/1147 (57%), Positives = 770/1147 (67%), Gaps = 65/1147 (5%)
Frame = -3
Query: 3877 IGEFDKRFGXXXXXXXXXXXXXXASSFEEVCSRLQKCFASLKQMFSQGHGPV--LDVLVQ 3704
IGEFD+R SF+ VC RL++ F LK MF++ PV LD LVQ
Sbjct: 187 IGEFDRRVSLILEELETVTEEEAEKSFDGVCLRLRQSFEMLKPMFAETESPVPVLDALVQ 246
Query: 3703 QAFMGIQTVYSAFSSGNLKKMDQNKELLLRLLIHIKNQYSVFLTPEQVKEIDVRVHALAS 3524
QAF GI+TV+S S NLKK +QNK+ LLRLLIHIKNQYS L+PEQVKEID RV +L
Sbjct: 247 QAFEGIKTVHSVLRSENLKKKEQNKDFLLRLLIHIKNQYSNILSPEQVKEIDTRVQSLVF 306
Query: 3523 ESVS-------VGKTTGNVNGSADPAERSGISEEKLRLDPRGSHVVRN---NDGRACLSK 3374
E S G T N N E+ IS L + SHVV + + +A L K
Sbjct: 307 EDDSNKESKLYAGSGT-NTNDKTHLPEKPDISSFGL-VSSGNSHVVSSIGSKNVQAGLPK 364
Query: 3373 LELPTNSRSRVDFSPLLNLHADYDEDSLPSPTRDNAPPLPVLKPIGFGTGAAARTQLIAP 3194
L+ PT SR R+ SPLL+LHA+YDE+SLPSPTR+NAPPLP+ KPIGFGTG T+ I
Sbjct: 365 LDTPTISRGRI-VSPLLDLHAEYDEESLPSPTRENAPPLPIHKPIGFGTGTVVFTEPITT 423
Query: 3193 KNVDTENGTLHPYITDAFKAVSSYQQKYGKNSIIASNRLPSPTPSEDGNDGGDDIHGEVS 3014
KNV+ E+ T HPYITDAFKAVSSYQQKY SN+LPSPTPSE+ +D DD H EVS
Sbjct: 424 KNVEAEDDTPHPYITDAFKAVSSYQQKY----FFTSNKLPSPTPSEECDD-KDDAHDEVS 478
Query: 3013 SSSLAGNVRTVGPSINAANTNSSGSFQMPSVNSTGGFQMPSVNSTGGFQMLSVNSTGGFP 2834
SSS GN VN+T Q+ +
Sbjct: 479 SSSANGNA--------------------GCVNTTSEIQVAT------------------- 499
Query: 2833 MAPVNSLAAQMAPINSSAAQMAPVKAVGQVGLEPNHVIKASAKSRDPRLRFMNSEVGN-- 2660
NS A +SS Q PVK VGQ+G PN I+ + KSRDPRLRF+NSE GN
Sbjct: 500 ----NSAA---CTDSSSRHQPGPVKPVGQLGSAPNPAIRPALKSRDPRLRFVNSESGNAS 552
Query: 2659 ------------APQNGIAAGLSNSRKHKTVDDHVPDDHNLKRQKNGSKSSRDVQVTSGR 2516
AP N + G++N RKHK VD+ P++H LKRQKNG +S DVQ+T GR
Sbjct: 553 DPNRRAMSLDFSAPNNDLVGGITNPRKHKAVDESFPENHTLKRQKNGLTNSSDVQMTPGR 612
Query: 2515 -GGWIEDSGSIASQTSNRVQSNKNMAVGNRNTGGEVGCDGR--XXXXXXXXXXXXXSVPN 2345
GGW+EDS S+ SQ S++++ N+NM + +N G V D R +P+
Sbjct: 613 GGGWLEDSSSVRSQLSDKIRLNENMEIEIKNPGNVVMSDRRPDSNPNIQVTNTGTCMIPS 672
Query: 2344 MST----------GAAPVVSLPSLLKDIAVNPTMLMQLVKMEQQRIAAEAQQKSAG---- 2207
+T AA VS PSLLKDIAVNPTMLMQL+++EQQR++AEAQQK+ G
Sbjct: 673 STTAPSSGTAPSSSAAASVSFPSLLKDIAVNPTMLMQLIQIEQQRLSAEAQQKTVGLMHN 732
Query: 2206 ----PAVNGLSNAISSV-------SEAGQNPASKPQMPPQTTSMN---DMGKIRMKPRDP 2069
++N L A+SS +E G NP+ +PQ+ QT S N D+G+IRMKPRDP
Sbjct: 733 MAHASSLNVLPGAVSSANVASMKSAEVGHNPSGRPQVTAQTVSTNSQSDVGRIRMKPRDP 792
Query: 2068 RRILHXXXXXXXXXXXXEPIKTSGSLSSDAQSSKDHSTVQEQGEQSQAIVLPSQPIVQPD 1889
RRILH K +G+LSSD QSSKDH + EQGEQ+QA LP
Sbjct: 793 RRILHNMVQKNETIVSER-AKPNGTLSSDPQSSKDHLAIGEQGEQAQATGLP-------- 843
Query: 1888 ISRQFTKNLQNLADLVSNSQASAPSIAGTQNISQPIASKISN--------DTTEPKTVPA 1733
+ Q KN +NL D+ S Q + +A Q ISQPI I+ +PKT+
Sbjct: 844 -TLQLAKNPKNLGDISSPLQLTTTPLAVPQIISQPIQFNINKVDLRPAAAVVNDPKTLST 902
Query: 1732 LSNQGGPMSSASQSANPWGDVDHLLDGYDDQQKAAIQKERARRIAEQNKMFAARKXXXXX 1553
++++G + A+QS N WGDVDHLLDGYDDQQKAAIQ+ERARRIAEQNKMFAARK
Sbjct: 903 VASEGS-TTVATQSTNAWGDVDHLLDGYDDQQKAAIQRERARRIAEQNKMFAARKLCLVL 961
Query: 1552 XXXXXXLNSAKFVEVDPIHEEILRKKEEQDKQRPERHLYRIPHMGMWTKLRPGIWNFLEK 1373
LNSAKFVEVDP+HEEILRKKEEQD+++P+RHL+R HMGMWTKLRPGIWNFLEK
Sbjct: 962 DLDHTLLNSAKFVEVDPVHEEILRKKEEQDREKPQRHLFRFQHMGMWTKLRPGIWNFLEK 1021
Query: 1372 ASQLYELHLYTMGNKLYATEMAKVLDPKGTLFSGRVISRGDDGDPFDGDERVPKSKDLDG 1193
AS+LYE+HLYTMGNKLYATEMAKVLDP GTLF+GRVISRGDD +PFDGDERVPKSKDLDG
Sbjct: 1022 ASKLYEMHLYTMGNKLYATEMAKVLDPTGTLFAGRVISRGDDSEPFDGDERVPKSKDLDG 1081
Query: 1192 VLGMESAVVIIDDSLRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDG 1013
VLGMESAVVIIDDS+RVWPHNKLNLIVVERYTYFP SRRQFGL GPSLLEIDHDERPEDG
Sbjct: 1082 VLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLFGPSLLEIDHDERPEDG 1141
Query: 1012 TLASSLAVIERIHRNFFSHHSLNEIDVRNILAAEQRKILAGCKIVFSRVFPVGEANPHLH 833
TLASSL VIERIH +FFSH SLN++DVRNILAAEQRKILAGCKIVFSRVFPVGEANPHLH
Sbjct: 1142 TLASSLTVIERIHDDFFSHRSLNDVDVRNILAAEQRKILAGCKIVFSRVFPVGEANPHLH 1201
Query: 832 PLWQTAEQFGAECTNQIDEQVTHVVANSRGTDKVNWALSTGRFVVYPGWVEASALLYRRA 653
PLWQ AEQFGA CTNQIDEQVTHVVANS GTDKVNWALSTGRFVV+P WVEASALLYRR
Sbjct: 1202 PLWQMAEQFGAACTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPSWVEASALLYRRV 1261
Query: 652 NEQDFAV 632
NEQDFAV
Sbjct: 1262 NEQDFAV 1268
Score = 76.6 bits (187), Expect = 2e-10
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = -3
Query: 4264 LKEISADDFKQQDARVPSRSGVWMGDLVRYPVHRNYNQDLYSFAWAQAVQNKPLGFDVK 4088
L+EISA+DFKQ DAR P S VW+G YP+ RNY +LYSFAWAQAVQNKPLG D+K
Sbjct: 48 LEEISAEDFKQ-DARDPPGSKVWVG----YPMSRNYAPNLYSFAWAQAVQNKPLGLDLK 101
>ref|XP_009421039.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Musa acuminata subsp. malaccensis]
Length = 1228
Score = 1079 bits (2790), Expect = 0.0
Identities = 633/1121 (56%), Positives = 727/1121 (64%), Gaps = 37/1121 (3%)
Frame = -3
Query: 3871 EFDKRFGXXXXXXXXXXXXXXASSFEEVCSRLQKCFASLKQMFS--QGHGPVLDVLVQQA 3698
+FD+R +SFE VC+RL+K F LK MF+ + VL +VQQA
Sbjct: 187 DFDRRVSLILEELEMITMEEAEASFEGVCARLRKSFEDLKPMFTGIESSDTVLHAVVQQA 246
Query: 3697 FMGIQTVYSAFSSGNLKKMDQNKELLLRLLIHIKNQYSVFLTPEQVKEIDVRVHALASES 3518
MGIQT YSA S ++K +QNK+LLLRLLIHIKNQY LTPEQV+EID V++L E
Sbjct: 247 VMGIQTTYSALDSFAIQK-EQNKQLLLRLLIHIKNQYYTLLTPEQVREIDTLVNSLVFEE 305
Query: 3517 VSVGKTTGNVNGSADPAERSGISEEKLRLDPRGSHVVRNNDGRACLSKLELPTNSRSRVD 3338
E+ G L R S V L LE PT SR+RV+
Sbjct: 306 -----------DHDKEKEQHGDGLVCLETPCRASKTVN-------LPNLEFPTPSRNRVE 347
Query: 3337 FSPLLNLHADYDEDSLPSPTRDNAPPLPVLKPIGFGTGAAARTQLIAPKNVDTENGTLHP 3158
FSPLL+LHADYD DSLPSPTR+N P + KPIG G +Q KN + E TLHP
Sbjct: 348 FSPLLDLHADYDADSLPSPTRENLPQFSIPKPIGLGMLPVVSSQPRTAKNEEAEEATLHP 407
Query: 3157 YITDAFKAVSSYQQKYGKNSIIASNRLPSPTPSEDGNDGGDDIHGEVSSSSLAGNVRTVG 2978
Y+TDA KAVS YQQ+YG S ++ NRLPSPTPSE+G D DD H E SSSS+ N T
Sbjct: 408 YVTDALKAVSCYQQRYGSTSFLSINRLPSPTPSEEG-DKDDDSHEEASSSSVVSNAETAC 466
Query: 2977 PSINAANTNSSGSFQMPSVNSTGGFQMPSVNSTGGFQMLSVNSTGGFPMAPVNSLAAQMA 2798
N A +SS + A
Sbjct: 467 TIQNQAVKSSSTA----------------------------------------------A 480
Query: 2797 PINSSAA-QMAPVKAVGQVGLEPNHVIKASAKSRDPRLRFMNSEV-----------GNAP 2654
NSSA Q PVK VGQVG K + K RDPRL+ MN+EV NA
Sbjct: 481 CSNSSAGDQPYPVKLVGQVGSGSKSSAKPALKRRDPRLKLMNNEVRGPSVGDKGIDSNAL 540
Query: 2653 QNGIAAGLSNSRKHKTVDDHVPDDHNLKRQKNGSKSSRDVQVTSGRGGWIEDSGSIASQT 2474
N + G N+RKHK+VD+ V DH +KRQKNG SRD+Q+TSGRGGW+EDS Q
Sbjct: 541 DNRLVGGSMNTRKHKSVDEPVTGDHKMKRQKNGFTGSRDMQMTSGRGGWLEDSS--IPQP 598
Query: 2473 SNRVQSNKNMAVGNRNTG-GEVGCDGRXXXXXXXXXXXXXSVPNMSTGAAPVVSLPSLLK 2297
S+R Q N+N V R G GEVG G+ +PN S +SLP LLK
Sbjct: 599 SDRNQINENFQVEVRKPGSGEVG-SGKKSDSNMNFSMLNGLIPNPSGNLPNTLSLPPLLK 657
Query: 2296 DIAVNPTMLMQLVKMEQQRIAAEAQQKSAGPA--------VNGLSNAISSVS-------E 2162
AVNPT+ +QL++MEQ R+AAE Q VNGL A+SSV+ E
Sbjct: 658 --AVNPTIFVQLLQMEQHRLAAENHQIVTASTSDVTNVSKVNGLPGAVSSVNSTPLKSQE 715
Query: 2161 AGQNPASKPQMPPQTTSM---NDMGKIRMKPRDPRRILHXXXXXXXXXXXXEPIKTSGSL 1991
GQN Q+P Q+ S+ ND+G+IRMKPRDPRR LH E K + ++
Sbjct: 716 VGQNHLGMSQIPSQSASVSSQNDVGRIRMKPRDPRRALHNNMVQMKNVIVSEQNKINEAI 775
Query: 1990 SSDAQSSKDHSTVQEQGEQSQAIVLPSQPIVQPDISRQFTKNLQNLADLVSNSQASAPSI 1811
QSS HST +E GEQ+QA VL +Q + QP++SRQ TKNL N+ VS+SQ +A S
Sbjct: 776 PGP-QSSMGHSTAREPGEQAQASVLATQFVPQPNMSRQLTKNLGNI---VSSSQLAATSQ 831
Query: 1810 AGTQNI----SQPIASKISNDTTEPKTVPALSNQGGPMSSASQSANPWGDVDHLLDGYDD 1643
A Q I +Q S + + KT+ + + G SQS N WGDVDH LDGY+D
Sbjct: 832 AVPQYIPSKANQVNVRPASAELNDSKTLVSEATAKG----VSQSVNAWGDVDHFLDGYND 887
Query: 1642 QQKAAIQKERARRIAEQNKMFAARKXXXXXXXXXXXLNSAKFVEVDPIHEEILRKKEEQD 1463
+Q+AAIQKERARRIAEQNKMFAARK LNSAKFVEVDP+HEEILR+KEEQD
Sbjct: 888 EQRAAIQKERARRIAEQNKMFAARKLCLVLDLDHTLLNSAKFVEVDPVHEEILRRKEEQD 947
Query: 1462 KQRPERHLYRIPHMGMWTKLRPGIWNFLEKASQLYELHLYTMGNKLYATEMAKVLDPKGT 1283
+++P+RHL+ HMGMWTKLRPGIWNFL+KAS+LYELHLYTMGNKLYATEMAKVLDP GT
Sbjct: 948 REKPQRHLFCFHHMGMWTKLRPGIWNFLDKASKLYELHLYTMGNKLYATEMAKVLDPTGT 1007
Query: 1282 LFSGRVISRGDDGDPFDGDERVPKSKDLDGVLGMESAVVIIDDSLRVWPHNKLNLIVVER 1103
LFSGRVISRGDD D DGDERVPKSKDLDGVLGMESAVVIIDDSLRVWP NKLNLIVVER
Sbjct: 1008 LFSGRVISRGDDADTVDGDERVPKSKDLDGVLGMESAVVIIDDSLRVWPLNKLNLIVVER 1067
Query: 1102 YTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHRNFFSHHSLNEIDVRNI 923
YTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIH+NFFSHHSL ++DVRNI
Sbjct: 1068 YTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHQNFFSHHSLKDVDVRNI 1127
Query: 922 LAAEQRKILAGCKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTNQIDEQVTHVVANSRG 743
LAAEQRKILAGC+IVFSRVFPVGEANPHLHPLWQTAEQFGA CTNQIDEQVTHVVANS G
Sbjct: 1128 LAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAICTNQIDEQVTHVVANSLG 1187
Query: 742 TDKVNWALSTGRFVVYPGWVEASALLYRRANEQDFAV*T*T 620
TDKVNWALSTGRFVV+PGWVEASALLYRRANE DFAV T T
Sbjct: 1188 TDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFAVKTMT 1228
Score = 66.2 bits (160), Expect = 2e-07
Identities = 36/58 (62%), Positives = 44/58 (75%)
Frame = -3
Query: 4264 LKEISADDFKQQDARVPSRSGVWMGDLVRYPVHRNYNQDLYSFAWAQAVQNKPLGFDV 4091
L+EISA+DFKQ+ AR RS V+MG YP+ +NY LYSFAWAQAV+NKPLG D+
Sbjct: 46 LEEISAEDFKQE-ARA-GRSSVFMG----YPMSKNYGPSLYSFAWAQAVRNKPLGLDL 97
>ref|XP_009386584.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Musa acuminata subsp. malaccensis]
Length = 1251
Score = 1069 bits (2765), Expect = 0.0
Identities = 617/1131 (54%), Positives = 732/1131 (64%), Gaps = 49/1131 (4%)
Frame = -3
Query: 3877 IGEFDKRFGXXXXXXXXXXXXXXASSFEEVCSRLQKCFASLKQMFS--QGHGPVLDVLVQ 3704
+G+FD+R +SFE+VC RL+K F LK MF+ + VL+ LVQ
Sbjct: 184 MGDFDRRVSLILEELETITIDEALASFEDVCLRLRKSFEDLKPMFTGIESSDTVLNALVQ 243
Query: 3703 QAFMGIQTVYSAFSSGNLKKMDQNKELLLRLLIHIKNQYSVFLTPEQVKEIDVRVHALAS 3524
QAFMGIQT YS +S ++ + N++LLLRLLIHIKNQYSV LT EQVKEID V+ L
Sbjct: 244 QAFMGIQTAYSVLNSDTFQRKELNQQLLLRLLIHIKNQYSVLLTSEQVKEIDTLVNLLVF 303
Query: 3523 ESVSVGKT------TGNVNGSADPAERSG--ISEEKLRLDPRGSHVVRNNDGRACLSKLE 3368
E + K N+N S +P S +S K L P+ L L
Sbjct: 304 EDHNKKKEQHGGIGNNNLNLSKEPGVSSDGLVSLGKPYLAPKA----------VSLPMLG 353
Query: 3367 LPTNSRSRVDFSPLLNLHADYDEDSLPSPTRDNAPPLPVLKPIGFGTGAAARTQLIAPKN 3188
LP R+RV+FSPLL+LHADYDEDSLPSPTR+ P PV KP+G +Q + K+
Sbjct: 354 LPMPPRNRVEFSPLLDLHADYDEDSLPSPTRETMPRFPVPKPVGHAMVPVLSSQSLTAKS 413
Query: 3187 VDTENGTLHPYITDAFKAVSSYQQKYGKNSIIASNRLPSPTPSEDGNDGGDDIHGEVSSS 3008
+ E T Y+TDA KAVS YQQKYGKNSI+++NRLPSPTPSE+G D DD H EVSSS
Sbjct: 414 EEAEGATSQLYVTDALKAVSFYQQKYGKNSILSNNRLPSPTPSEEG-DKDDDSHEEVSSS 472
Query: 3007 SLAGNVRTVGPSINAANTNSSGSFQMPSVNSTGGFQMPSVNSTGGFQMLSVNSTGGFPMA 2828
S+AGN +T + + +SS +
Sbjct: 473 SVAGNAKTFYTATQQVSKSSSNATHT---------------------------------- 498
Query: 2827 PVNSLAAQMAPINSSAAQMAPVKAVGQVGLEPNHVIKASAKSRDPRLRFMNSEVG----- 2663
NSS PVK QV +K + K RDPRLRFMN+EV
Sbjct: 499 ------------NSSPVDRCPVKLAEQVQSGTKPAVKPALKRRDPRLRFMNNEVRGPSEE 546
Query: 2662 ------NAPQNGIAAGLSNSRKHKTVDDHVPD-DHNLKRQKNGSKSSRDVQVTSGRGGWI 2504
NAP +G G N+RKHK D+ D +KRQ+NGS SSR++ V SG W+
Sbjct: 547 RSGIRCNAPDDGFLGGTINARKHKIADESAAVVDQTMKRQRNGSMSSRNMHVISGSSEWL 606
Query: 2503 EDSGSIASQTSNRVQSNKNMAVGNRNTG-GEVGCDGRXXXXXXXXXXXXXSVPNMSTGAA 2327
E SI Q S R Q N+N+ R G GEVG D + PN S+ A
Sbjct: 607 EGD-SIIPQPSERSQVNENLHADIRKAGTGEVGFD-KEPNSNANFSMLNGLKPNSSSNPA 664
Query: 2326 PVVSLPSLLKDIAVNPTMLMQLVKMEQQRIAAEAQQKSAGP--------AVNGLSNAISS 2171
+SLPSLLK AVNPT+L+QL+KMEQQR+AAE QQ +V+GL A+SS
Sbjct: 665 GPISLPSLLK--AVNPTILVQLLKMEQQRLAAENQQNVTTSTSDITNVSSVSGLPGAVSS 722
Query: 2170 V-------SEAGQNPASKPQMPPQTTSM---NDMGKIRMKPRDPRRILHXXXXXXXXXXX 2021
V +E GQN Q+ PQ+ SM ND+G+IRMKPRDPRRILH
Sbjct: 723 VISTPVRSNEPGQNQLGISQVSPQSASMSSQNDLGRIRMKPRDPRRILHNNIVQKNEVVA 782
Query: 2020 XEPIKTSGSLSSDAQSSKDHSTVQEQGEQSQAIVLPSQPIVQPDISRQFTKNLQNLADLV 1841
E +G+ ++ Q + H T +E GEQ+Q+ +LP+Q PD S + TKNL + V
Sbjct: 783 SEQNNINGA-TAGPQGTMGHLTAREAGEQAQSNILPTQFSPPPDRSEELTKNLPTI---V 838
Query: 1840 SNSQASAPSIAGTQNISQPIASKISN--------DTTEPKTVPALSNQGGPMSSASQSAN 1685
S+ Q + S SQPI+SK + + +PKTV + ++ + S+S N
Sbjct: 839 SSLQLTTTSPTIPHGNSQPISSKGNQMDVKLALAEVNDPKTVSDVLSERS--AGVSESTN 896
Query: 1684 PWGDVDHLLDGYDDQQKAAIQKERARRIAEQNKMFAARKXXXXXXXXXXXLNSAKFVEVD 1505
WGDVDHLLDGY+D+QKAAIQ+ERARRI EQNKMFAARK LNSAKFVEVD
Sbjct: 897 LWGDVDHLLDGYNDEQKAAIQRERARRIVEQNKMFAARKLCLVLDLDHTLLNSAKFVEVD 956
Query: 1504 PIHEEILRKKEEQDKQRPERHLYRIPHMGMWTKLRPGIWNFLEKASQLYELHLYTMGNKL 1325
P+HEE+LR+KEEQD+++P+RH+Y HMGMWTKLRPGIWNFLEKAS+LYELHLYTMGNKL
Sbjct: 957 PVHEEVLRRKEEQDREKPQRHIYCFQHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKL 1016
Query: 1324 YATEMAKVLDPKGTLFSGRVISRGDDGDPFDGDERVPKSKDLDGVLGMESAVVIIDDSLR 1145
YATEMAKVLDP G+LFSGRVISRGDDGDP +GDERVPKSKDLDGVLGMESAVVIIDDS+R
Sbjct: 1017 YATEMAKVLDPTGSLFSGRVISRGDDGDPLNGDERVPKSKDLDGVLGMESAVVIIDDSVR 1076
Query: 1144 VWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHRNF 965
VWPHNKLNLIVVERYT+FPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIH+NF
Sbjct: 1077 VWPHNKLNLIVVERYTFFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHQNF 1136
Query: 964 FSHHSLNEIDVRNILAAEQRKILAGCKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTNQ 785
FSHHS+ + DVRNILA+EQRKIL GC+IVFSRVFPVGEANPHLHPLWQTAEQFGA CT+Q
Sbjct: 1137 FSHHSIKDADVRNILASEQRKILTGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTSQ 1196
Query: 784 IDEQVTHVVANSRGTDKVNWALSTGRFVVYPGWVEASALLYRRANEQDFAV 632
IDEQVTHVVANS GTDKVNWALSTGRFVV+PGWVEASALLYRR NE DFAV
Sbjct: 1197 IDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRVNEHDFAV 1247
Score = 69.7 bits (169), Expect = 2e-08
Identities = 38/58 (65%), Positives = 42/58 (72%)
Frame = -3
Query: 4264 LKEISADDFKQQDARVPSRSGVWMGDLVRYPVHRNYNQDLYSFAWAQAVQNKPLGFDV 4091
L+EISADDFK+ D R RSGVWMG Y + NY LYSFAWAQAVQNKPLG D+
Sbjct: 46 LEEISADDFKK-DTRT-GRSGVWMG----YRMSNNYGPSLYSFAWAQAVQNKPLGLDL 97
>ref|XP_010249185.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Nelumbo nucifera]
Length = 1313
Score = 1033 bits (2670), Expect = 0.0
Identities = 586/1145 (51%), Positives = 734/1145 (64%), Gaps = 65/1145 (5%)
Frame = -3
Query: 3871 EFDKRFGXXXXXXXXXXXXXXASSFEEVCSRLQKCFASLKQMFSQGHGPVLDVLVQQAFM 3692
EF+KR SF+ +C R++ SL+ M S+ P +D L++Q+F
Sbjct: 219 EFEKRLNSIRECLETVTVKEADKSFDAICFRMRTSLESLQAMISENRVPAMDDLIEQSFT 278
Query: 3691 GIQTVYSAFSSGNLKKMDQNKELLLRLLIHIKNQYSVFLTPEQVKEIDVRVHALA----- 3527
GIQT+ S + S ++ +QNK++ RL++H+K Q V +P+++KEI+ V +L
Sbjct: 279 GIQTINSVYCSMTPQQQEQNKDIFSRLIVHLKIQEPVLFSPDRMKEIESMVRSLDCPSAL 338
Query: 3526 -------SESVSVGKTTGNVNGSADPAERSGIS---EEKLRLDPRGSHVVR--NNDGRAC 3383
E ++ N+ S+ +E++G +K +L+P N + R+
Sbjct: 339 SNIKVLNQEKEALVGVRENIKNSSILSEKAGNGVDFSKKFQLEPMPVKYGDWDNLNTRSE 398
Query: 3382 LSKLELPTNSRSRVDFSPLLNLHADYDEDSLPSPTRDNAPPLPVLKPIGFGTGAAAR--- 3212
SK L SRSR+ F PLL+LH D+D DSLPSPTR PPLP+ KP+ G
Sbjct: 399 TSKAGLSFGSRSRIGFGPLLDLHRDHDADSLPSPTRKAPPPLPMQKPLSISDGTPRSDLV 458
Query: 3211 TQLIAPKNVDTENGTLHPYITDAFKAVSSYQQKYGKNSIIASNRLPSPTPSEDGNDGGDD 3032
T ++ K DT LHPY TDA KAVS+YQQK+G+ S++ S+RLPSPTPSE+ +DG D
Sbjct: 459 TNIVEDKMDDT---ALHPYETDALKAVSTYQQKFGRTSLLLSDRLPSPTPSEECDDGDGD 515
Query: 3031 IHGEVSSSSLAGNVRTVGPSINAANTNSSGSFQMPSVNSTGGFQMPSVNSTGGFQMLSVN 2852
I+GEVSSS+ G V T+ S + +S+ S+
Sbjct: 516 INGEVSSSTTVGGVATINSSTSLKTVSSATSYAD-------------------------- 549
Query: 2851 STGGFPMAPVNSLAAQMAPINSSAAQMAPVKAVGQVGLEPNHVIKASAKSRDPRLRFMNS 2672
N S + P +VGQ+G +HVI+ +AK+RDPRLR+ NS
Sbjct: 550 --------------------NLSGQGLVPAVSVGQLGSMSSHVIR-TAKNRDPRLRYANS 588
Query: 2671 EVG-----NAPQNGI--------AAGLSNSRKHKTVDDHVPDDHNLKRQKNG---SKSSR 2540
EVG P +G G+ SRKHK V++ + DDH KRQ+NG S +S
Sbjct: 589 EVGPLDLNQRPPSGDHDIRKSEPLGGIMGSRKHKIVEESLLDDHTFKRQRNGLINSGASG 648
Query: 2539 DVQVTSGRGGWIEDSGSIASQTSNRVQSNKNMAVGNRNTG-GEVGCDGRXXXXXXXXXXX 2363
DVQV SG GGW+E+S S+ Q ++R + + R G GE +
Sbjct: 649 DVQVVSGSGGWLEESSSMGLQPTDRSRLIEKRESDPRKLGSGEASFGNKQDTGCSTYNVT 708
Query: 2362 XXSVPNMS-TGAAPVVSLPSLLKDIAVNPTMLMQLVKMEQQRIAAEAQQKSAGPAVNGLS 2186
++ +G VSLPSLLKDIAVNPTMLM L+KME QR+A EA QK PA + +
Sbjct: 709 TGGNEQLTASGIGSTVSLPSLLKDIAVNPTMLMHLIKMEHQRLAVEALQKCGNPAQSTMQ 768
Query: 2185 NAISSV---------------SEAGQNPASKPQMPPQTTSM---NDMGKIRMKPRDPRRI 2060
++ SSV SE + A Q+ QT SM D+GKIRMKPRDPRRI
Sbjct: 769 SSSSSVMPGKIASVNIASKTLSEPEKKSAGNSQISVQTASMIPHGDLGKIRMKPRDPRRI 828
Query: 2059 LHXXXXXXXXXXXXEPIKTSGSLSSDAQSSKDHSTVQEQGEQSQAIVLPSQPIVQPDISR 1880
LH E K +G+ S + + +D+ V++QGEQ+Q L SQ PDI++
Sbjct: 829 LHSNTFQKSDSSGPERFKANGTPSPNTPTCRDNLIVRQQGEQAQTNSLLSQSTAPPDIAQ 888
Query: 1879 QFTKNLQNLADLVSNSQA-SAPSIAGTQNISQPIASK--------ISNDTTEPKTVPALS 1727
QFTK L+N+A+++S SQA + PS+ SQP+ +K ++ D+ + ++ AL+
Sbjct: 889 QFTKKLKNIANILSASQAINTPSVVPQTISSQPVPAKMDKVDMKVVATDSNDQRSWSALT 948
Query: 1726 NQGGPMSSASQSANPWGDVDHLLDGYDDQQKAAIQKERARRIAEQNKMFAARKXXXXXXX 1547
+ +SQ+A WGDV+HL +GYDDQQKAAIQ+ERARRI EQN+MFAARK
Sbjct: 949 PEERAAGPSSQNA--WGDVEHLFEGYDDQQKAAIQRERARRIEEQNQMFAARKLCLVLDL 1006
Query: 1546 XXXXLNSAKFVEVDPIHEEILRKKEEQDKQRPERHLYRIPHMGMWTKLRPGIWNFLEKAS 1367
LNSAKFVEVDP+HEE+LRKKEEQD+++P+RHL+R HMGMWTKLRPGIWNFLEKAS
Sbjct: 1007 DHTLLNSAKFVEVDPVHEEMLRKKEEQDREKPQRHLFRFTHMGMWTKLRPGIWNFLEKAS 1066
Query: 1366 QLYELHLYTMGNKLYATEMAKVLDPKGTLFSGRVISRGDDGDPFDGDERVPKSKDLDGVL 1187
+LYELHLYTMGNKLYATEMAKVLDP G LF+GRVISRGDDGDPFDGDER PKSKDLDGVL
Sbjct: 1067 KLYELHLYTMGNKLYATEMAKVLDPTGVLFAGRVISRGDDGDPFDGDERQPKSKDLDGVL 1126
Query: 1186 GMESAVVIIDDSLRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTL 1007
GMESAVVIIDDS+RVWPHNKLNLIVVERYTYFP SRRQ GL GPSLLEIDHDERPEDGTL
Sbjct: 1127 GMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQLGLHGPSLLEIDHDERPEDGTL 1186
Query: 1006 ASSLAVIERIHRNFFSHHSLNEIDVRNILAAEQRKILAGCKIVFSRVFPVGEANPHLHPL 827
ASSLAVIERIH+NFFSH +LN++DVRNILAAEQ+KILAGC+IVFSRVFPVGEANPHLHPL
Sbjct: 1187 ASSLAVIERIHQNFFSHQNLNDVDVRNILAAEQQKILAGCRIVFSRVFPVGEANPHLHPL 1246
Query: 826 WQTAEQFGAECTNQIDEQVTHVVANSRGTDKVNWALSTGRFVVYPGWVEASALLYRRANE 647
WQTAEQFGA CTNQIDEQVTHVVA S GTDKVNWALSTGRFVV+PGWVEASALLYRRANE
Sbjct: 1247 WQTAEQFGAVCTNQIDEQVTHVVAISLGTDKVNWALSTGRFVVHPGWVEASALLYRRANE 1306
Query: 646 QDFAV 632
DFA+
Sbjct: 1307 HDFAI 1311
>ref|XP_006662962.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
phosphatase-like 3-like [Oryza brachyantha]
Length = 1267
Score = 976 bits (2523), Expect = 0.0
Identities = 579/1147 (50%), Positives = 709/1147 (61%), Gaps = 67/1147 (5%)
Frame = -3
Query: 3871 EFDKRFGXXXXXXXXXXXXXXASSFEEVCSRLQKCFASLKQMFSQGHGPV--LDVLVQQA 3698
+FD+R G SFE C+RL+ F +LK +F + P+ LD LVQQA
Sbjct: 186 DFDQRVGSILEELETISIEEAEKSFEGACTRLRTSFENLKPLFPETGSPMPMLDTLVQQA 245
Query: 3697 FMGIQTVYSAFSSGNLKKMDQNKELLLRLLIHIKNQYSVFLTPEQVKEIDVRVHALASES 3518
F+ I T+ + +S ++ K +Q K +LL+LL HIKN+YS LTP+Q E+D RV L E
Sbjct: 246 FIAIDTITTVANSYDMPKREQTKNMLLKLLFHIKNRYSYMLTPDQRNELDSRVRQLVFED 305
Query: 3517 VSVGKTTGN-------VNGSADPAERSGISEEKLRLDPRGSHVVRNNDGRACLSKLELPT 3359
GK T N N S A + E+L + N + K+E+P+
Sbjct: 306 ---GKDTANCPNATCGTNTSNVAATSGQVLSERLPFESGAG----NTFSGTSMLKVEIPS 358
Query: 3358 NSRSRVDFSPLLNLHADYDEDSLPSPTRDNAPPLPVLKPIGFGTGAAARTQLIAPKNVDT 3179
+R SPLL+LHADYDE+SLPSPTRD+ PP PV KPIGFGT A + + V+
Sbjct: 359 KNRM---ISPLLDLHADYDENSLPSPTRDSTPPFPVPKPIGFGTFLMAPDRPSIMERVEP 415
Query: 3178 ENGTLHPYITDAFKAVSSYQQKYGKNSIIASNRLPSPTPSEDGNDGGD---DIHGEVSSS 3008
+ +P + DA KAVSSYQQKYG+ S AS+ LPSPTPS DG+ GD DI GEVSS
Sbjct: 416 VKNSSYPSLNDALKAVSSYQQKYGQKSTFASDDLPSPTPSGDGDKSGDKGGDIFGEVSSF 475
Query: 3007 SLAGNVRTVGPSINAANTNSSGSFQMPSVNSTGGFQMPSVNSTGGFQMLSVNSTGGFPMA 2828
+ + V P +N QMP PS ST +S+ F
Sbjct: 476 PASNKI--VLPVVN----------QMP----------PSRPSTVS------SSSDSFAGG 507
Query: 2827 PVNSLAAQMAPINSSAAQMAPVKAVGQVGLEPNHVIKASAKSRDPRLRFMNSEVGNA--- 2657
P P++ S NH++KA+AKSRDPRLRF+N + G
Sbjct: 508 PPGYAKQIENPVSGS-----------------NHMLKATAKSRDPRLRFLNRDAGVVADA 550
Query: 2656 ----------PQNGIAAGLS---NSRKHKTVDDHVPDDHNLKRQKNGSKSSRDVQVTSGR 2516
P G+ NSRKHKTVD+ + D++ LKR + G+ + RDV +GR
Sbjct: 551 NRRLNFAEPNPSKDRTMGVGVPINSRKHKTVDEPLVDENMLKRSRGGNGNPRDVLTPAGR 610
Query: 2515 GGWIEDSGSIASQTSNRVQSNKNMAVGNRNTGGE---------VGCDGRXXXXXXXXXXX 2363
GGW +D +++S +S+ Q N+N +GN TG +
Sbjct: 611 GGWAKDGVNVSSYSSDGFQPNQNTRLGNSTTGSHNVRTDSTLVSNTNNMTNSSGINTGVV 670
Query: 2362 XXSVPNMS--TGAAPVVSLPSLLKDIAVNPTMLMQLVKMEQQRIAAEAQQKSAGPAVNGL 2189
N S T +AP VSLP++LKDIAVNPTMLMQ ++MEQQ+++A + +V
Sbjct: 671 QAPQTNSSPQTSSAPSVSLPAMLKDIAVNPTMLMQWIQMEQQKMSATEPLQKVTASVGMT 730
Query: 2188 SN----------AISSVSEAGQNPASKPQMPPQTT---SMNDMGKIRMKPRDPRRILHXX 2048
SN S +EA P+ + Q+P QT S ND G IRMKPRDPRRILH
Sbjct: 731 SNETAGMVLPLSCASKTTEAAPVPSVRSQVPMQTAAVHSQNDAGVIRMKPRDPRRILHSN 790
Query: 2047 XXXXXXXXXXEPI---KTSGSLSSDAQSSKDHSTVQEQ-GEQSQAIVLPSQPIVQPDISR 1880
+ K +G+ D+Q SKDH EQ EQ Q LPSQP+ +R
Sbjct: 791 IAQKNDTVPPVGVEQAKINGTALPDSQGSKDHLLNHEQQAEQLQTSALPSQPVTPS--AR 848
Query: 1879 QFTKNLQNLADLVSNSQASAPSI---------AGTQNISQPIASKISNDTTEPKTVPALS 1727
Q T N A+ VSNSQ +A ++ + + N + P + N+T +
Sbjct: 849 QVTMN----ANPVSNSQLAATALMPHGSTQQTSSSVNKADPRLTAGQNETNDDAVTST-- 902
Query: 1726 NQGGPMSS--ASQSANPWGDVDHLLDGYDDQQKAAIQKERARRIAEQNKMFAARKXXXXX 1553
GP+++ A A+PWGDVDHLLDGYDDQQKA IQKERARRI EQ KMFAA+K
Sbjct: 903 ---GPLTAPDAVLPASPWGDVDHLLDGYDDQQKALIQKERARRIMEQQKMFAAQKLCLVL 959
Query: 1552 XXXXXXLNSAKFVEVDPIHEEILRKKEEQDKQRPERHLYRIPHMGMWTKLRPGIWNFLEK 1373
LNSAKF EV+PIHEEILRKKEEQD++R +RHL+ HMGMWTKLRPGIWNFLEK
Sbjct: 960 DLDHTLLNSAKFAEVEPIHEEILRKKEEQDRERADRHLFCFHHMGMWTKLRPGIWNFLEK 1019
Query: 1372 ASQLYELHLYTMGNKLYATEMAKVLDPKGTLFSGRVISRGDDGDPFDGDERVPKSKDLDG 1193
AS+LYELHLYTMGNK+YATEMA+VLDP GTLF+GRVISRGDDGD D DERVPKSKDLDG
Sbjct: 1020 ASKLYELHLYTMGNKIYATEMARVLDPTGTLFAGRVISRGDDGDTLDSDERVPKSKDLDG 1079
Query: 1192 VLGMESAVVIIDDSLRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDG 1013
VLGMESAVVIIDDS+RVWPHNK NLIVVERYTYFP SRRQFGL GPSLLEID DERPEDG
Sbjct: 1080 VLGMESAVVIIDDSVRVWPHNKHNLIVVERYTYFPCSRRQFGLPGPSLLEIDRDERPEDG 1139
Query: 1012 TLASSLAVIERIHRNFFSHHSLNEIDVRNILAAEQRKILAGCKIVFSRVFPVGEANPHLH 833
TLASSLAVIERIH+NFF+H +LN+ DVR+ILA+EQ++IL GC+IVFSR+FPVGEANPH+H
Sbjct: 1140 TLASSLAVIERIHQNFFTHPNLNDADVRSILASEQQRILGGCRIVFSRIFPVGEANPHMH 1199
Query: 832 PLWQTAEQFGAECTNQIDEQVTHVVANSRGTDKVNWALSTGRFVVYPGWVEASALLYRRA 653
PLWQTAEQFGA CTNQID++VTHVVANS GTDKVNWALSTGRFVV+PGWVEASALLYRRA
Sbjct: 1200 PLWQTAEQFGAVCTNQIDDRVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRA 1259
Query: 652 NEQDFAV 632
+E DFAV
Sbjct: 1260 SELDFAV 1266
>ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
[Theobroma cacao] gi|508707765|gb|EOX99661.1| RNA
polymerase II C-terminal domain phosphatase-like 3,
putative [Theobroma cacao]
Length = 1290
Score = 965 bits (2495), Expect = 0.0
Identities = 564/1108 (50%), Positives = 696/1108 (62%), Gaps = 51/1108 (4%)
Frame = -3
Query: 3802 SFEEVCSRLQKCFASLKQMFSQGHGPVLDVLVQQAFMGIQTVYSAFSSGNLKKMDQNKEL 3623
SFE VCSRL SL+ + + P D L+Q AF I SAF + N +QN +
Sbjct: 235 SFEGVCSRLHNALESLRALILECSVPAKDALIQLAFGAIN---SAFVALNCNSKEQNVAI 291
Query: 3622 LLRLLIHIKNQYSVFLTPEQVKEIDVRVHALASESVSVG-----KTTGNVNGSADPAERS 3458
L RLL +K P+++KEIDV + +L S + ++ K VN A
Sbjct: 292 LSRLLSIVKGHDPSLFPPDKMKEIDVMLISLNSPARAIDTEKDMKVVDGVNKKDPDALPE 351
Query: 3457 GISEEKLRLD--PRGSHVVRNNDGRACLSKLELPT-NSRSRVDFSPLLNLHADYDEDSLP 3287
I + + P + V NN A L+ N R+R PLL+LH D+D DSLP
Sbjct: 352 NICHDLTVTNKLPSSAKFVINNKPNALTETLKPGVPNFRNRGISLPLLDLHKDHDADSLP 411
Query: 3286 SPTRDNAPPLPVLKPIGFGTGAAARTQLIAPKNVDTENGTLHPYITDAFKAVSSYQQKYG 3107
SPTR+ P LPV KP+ G + + D E LHPY TDA KA S+YQQK+G
Sbjct: 412 SPTRETTPCLPVNKPLTSGDVMVKSGFMTGKGSHDAEGDKLHPYETDALKAFSTYQQKFG 471
Query: 3106 KNSIIASNRLPSPTPSEDGNDGGDDIHGEVSSSSLAGNVRTVGPSINAANTNSSGSFQMP 2927
+ S +S+RLPSPTPSE+ D G D GEVSSSS GN + P + P
Sbjct: 472 QGSFFSSDRLPSPTPSEESGDEGGDNGGEVSSSSSIGNFKPNLPILG-----------HP 520
Query: 2926 SVNSTGGFQMPSVNSTGGFQMLSVNSTGGFPMAPVNSLAAQMAPINSSAAQMAPVKAVGQ 2747
V+S P V+S + + PM+ V+
Sbjct: 521 IVSSA-----PLVDSASSSLQGQITTRNATPMSSVS------------------------ 551
Query: 2746 VGLEPNHVIKASAKSRDPRLRFMNSEVG----------NAPQNGIAAGLSNSRKHKTVDD 2597
N V K+ AKSRDPRL F NS NA + G+ +SRK K+V++
Sbjct: 552 -----NIVSKSLAKSRDPRLWFANSNASALDLNERLLHNASKVAPVGGIMDSRKKKSVEE 606
Query: 2596 HVPDDHNLKRQKNGSKS---SRDVQVTSGRGGWIEDSGSIASQTSNRVQSNKNMAVGNRN 2426
+ D LKRQ+N ++ +RDVQ SG GGW+ED+ +I SQ +NR Q+ +N+ +R
Sbjct: 607 PILDSPALKRQRNELENLGVARDVQTVSGIGGWLEDTDAIGSQITNRNQTAENLESNSRK 666
Query: 2425 TGGEVGCDGRXXXXXXXXXXXXXSVPNMSTGAAPVVSLPSLLKDIAVNPTMLMQLVKM-E 2249
V VP ST SLP+LLKDIAVNPTML+ ++KM +
Sbjct: 667 MDNGVTSSSTLSGKTNITVGTNEQVPVTSTSTP---SLPALLKDIAVNPTMLINILKMGQ 723
Query: 2248 QQRIAAEAQQKSAG--------PAVNGLSNAISS-----------VSEAGQNPASKPQMP 2126
QQR+ AEAQQKS P+ N L +SS V +SKP
Sbjct: 724 QQRLGAEAQQKSPDPVKSTFHQPSSNSLLGVVSSTNVIPSPSVNNVPSISSGISSKPAGN 783
Query: 2125 PQTTSMNDMGKIRMKPRDPRRILHXXXXXXXXXXXXEPIKTSGSLSSDAQSSKDHSTVQE 1946
Q S ++ GKIRMKPRDPRR+LH + +KT+G+L+S Q SKD+ Q+
Sbjct: 784 LQVPSPDESGKIRMKPRDPRRVLHGNSLQRSGSMGLDQLKTNGALTSSTQGSKDNLNAQK 843
Query: 1945 QGEQSQAIVLPSQPIVQPDISRQFTKNLQNLADLVSNSQA--SAPSIAGTQNISQPIASK 1772
Q+++ + SQ + PDI++QFT NL+N+AD++S SQA S P ++ + QP+ K
Sbjct: 844 LDSQTESKPMQSQLVPPPDITQQFTNNLKNIADIMSVSQALTSLPPVSHNL-VPQPVLIK 902
Query: 1771 --------ISNDTTEPKTVPALSNQGGPMSSASQSANPWGDVDHLLDGYDDQQKAAIQKE 1616
+ +++ + +T L+ + G ++ +S N WGDV+HL + YDDQQKAAIQ+E
Sbjct: 903 SDSMDMKALVSNSEDQQTGAGLAPEAG--ATGPRSQNAWGDVEHLFERYDDQQKAAIQRE 960
Query: 1615 RARRIAEQNKMFAARKXXXXXXXXXXXLNSAKFVEVDPIHEEILRKKEEQDKQRPERHLY 1436
RARRI EQ KMF+ARK LNSAKF+EVDP+HEEILRKKEEQD+++PERHL+
Sbjct: 961 RARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFIEVDPVHEEILRKKEEQDREKPERHLF 1020
Query: 1435 RIPHMGMWTKLRPGIWNFLEKASQLYELHLYTMGNKLYATEMAKVLDPKGTLFSGRVISR 1256
R HMGMWTKLRPGIWNFLEKAS+LYELHLYTMGNKLYATEMAKVLDPKG LF+GRVISR
Sbjct: 1021 RFHHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISR 1080
Query: 1255 GDDGDPFDGDERVPKSKDLDGVLGMESAVVIIDDSLRVWPHNKLNLIVVERYTYFPSSRR 1076
GDDGDPFDGDERVP+SKDL+GVLGMESAVVIIDDS+RVWPHNKLNLIVVERYTYFP SRR
Sbjct: 1081 GDDGDPFDGDERVPRSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRR 1140
Query: 1075 QFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHRNFFSHHSLNEIDVRNILAAEQRKIL 896
QFGLLGPSLLEIDHDERPEDGTLASSLAVIERIH++FFSH +L+++DVRNILA+EQRKIL
Sbjct: 1141 QFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHQDFFSHQNLDDVDVRNILASEQRKIL 1200
Query: 895 AGCKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTNQIDEQVTHVVANSRGTDKVNWALS 716
AGC+IVFSRVFPVGEANPHLHPLWQTAEQFGA CTNQIDE VTHVVANS GTDKVNWALS
Sbjct: 1201 AGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALS 1260
Query: 715 TGRFVVYPGWVEASALLYRRANEQDFAV 632
TG+FVV+PGWVEASALLYRRANE DFA+
Sbjct: 1261 TGKFVVHPGWVEASALLYRRANEVDFAI 1288
>ref|XP_012088736.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Jatropha curcas] gi|643708360|gb|KDP23276.1|
hypothetical protein JCGZ_23109 [Jatropha curcas]
Length = 1283
Score = 940 bits (2429), Expect = 0.0
Identities = 559/1106 (50%), Positives = 688/1106 (62%), Gaps = 49/1106 (4%)
Frame = -3
Query: 3802 SFEEVCSRLQKCFASLKQMFSQGHGPVLDVLVQQAFMGIQTVYSAFSSGNLKKMDQNKEL 3623
SFE CS L SL+++ + + P D L+Q + +Q+V S F+S N K +QNK+
Sbjct: 242 SFETACSMLGNTLKSLREVIGKNNIPTKDNLLQLSSNAVQSVNSVFTSMNHKLREQNKDS 301
Query: 3622 LLRLLIHIKNQYSVFLTPEQVKEIDVRVHALASESVSVGKTT------GNVNGSADPAER 3461
R L + + L+PE +KEI+V +L+S S K + GN A+
Sbjct: 302 FSRFLSVVNSHVPSLLSPELIKEIEVMTSSLSSISGEKEKESLIFSDEGNKKDDMS-AKS 360
Query: 3460 SGISEEKLRLDPRGSHVVRNNDGRACLSKLELPTNS-RSRVDFSPLLNLHADYDEDSLPS 3284
SG S + + +N L ++ ++ +SR PLL+LH D+D DSLPS
Sbjct: 361 SGHSLTTAKKLSSFAGSFASNKPNMSLEAPKMGVSTFKSRAGLLPLLDLHKDHDADSLPS 420
Query: 3283 PTRDNAPPLPVLKPIGFGTGAAARTQLIAPKNVDTENGTLHPYITDAFKAVSSYQQKYGK 3104
PTR+ APPLPV + T +A N DT+ +HPY TDA KAVSSYQQK+ +
Sbjct: 421 PTREAAPPLPVRR---------VSTPKVALDNEDTK---MHPYETDALKAVSSYQQKFNR 468
Query: 3103 NSIIASNRLPSPTPSEDGNDGGDDIHGEVSSSSLAGNVRTVGPSINAANTNSSGSFQMPS 2924
+S ++RLPSPTPSE+ +G D+ GEVSSSS G R AN +SG
Sbjct: 469 SSFAVNDRLPSPTPSEESGNGDGDVGGEVSSSSAVGQFR-------PANPPNSGQ----- 516
Query: 2923 VNSTGGFQMPSVNSTGGFQMLSVNSTGGFPMAPVNSLAAQMAPINSSAAQMAPVKAVGQV 2744
S+ ST P +S+ + P K G V
Sbjct: 517 ---------------------SIVSTSPHPE-------------SSNMQGVVPAKNAGPV 542
Query: 2743 GLEPNHVIKASAKSRDPRLRFMNSE------------VGNAPQNGIAAGLSNSRKHKTVD 2600
+ +KASAKSRDPRLRF+NS+ V N P+ G N +K K+VD
Sbjct: 543 SSGSSLTVKASAKSRDPRLRFVNSDANALDQNHVLPLVNNTPKVEYLGGPMNLKKQKSVD 602
Query: 2599 DHVPDDHNLKRQKNGSKSS---RDVQVTSGRGGWIEDSGSIASQTSNRVQSNKNMAVGNR 2429
D V D +LKRQ+N + S +V+ GGW+ED+ + QT NR Q +N
Sbjct: 603 DSVLDGPSLKRQRNVLEHSGGVGNVKTMIASGGWLEDTDMVRPQTMNRNQLVENSDPRRM 662
Query: 2428 NTGGEVGCDGRXXXXXXXXXXXXXSVPNMSTGA-----------APVVSLPSLLKDIAVN 2282
+ G V C P + TGA SLP LLK+IAVN
Sbjct: 663 DNG--VACPSTVSGISSVSISGNEQKPVIGTGAITEGEQIQMTGTSEASLPDLLKNIAVN 720
Query: 2281 PTMLMQLVKM-EQQRIAAEAQQKSAGPA--------VNGLSNAISSVSEAGQNPASKP-- 2135
PTML+ L+KM +QQR A +AQQK + PA N + ++ V+ P+ P
Sbjct: 721 PTMLLNLLKMGQQQRSAIDAQQKPSDPAKTSKHPLNANAILGSVPVVNVVPPQPSVMPRP 780
Query: 2134 ----QMPPQTTSMNDMGKIRMKPRDPRRILHXXXXXXXXXXXXEPIKTSGSLSSDAQSSK 1967
Q+PPQ ++ ++GKIRMKPRDPRR+LH E KT+ + Q +K
Sbjct: 781 AGTLQVPPQ-AAVEELGKIRMKPRDPRRVLHYQTLQKNGNMGYEQFKTNLTSPPTDQGTK 839
Query: 1966 DHSTVQEQGEQSQAIVLPSQPIVQPDISRQFTKNLQNLADLVSNSQASAPSIAGTQNI-S 1790
D+ VQ+Q Q++ +P Q +V PDIS FTK+L+N+AD+VS S AS +QN+ S
Sbjct: 840 DNQIVQKQDGQAETEPVPLQSLVVPDISLPFTKSLKNIADIVSVSHASTSPTVVSQNLAS 899
Query: 1789 QPIASKISNDTTEPKTVPALSNQGGPMSSASQSANPWGDVDHLLDGYDDQQKAAIQKERA 1610
QP + +SN + +P + + + P+ Q A WGDV+HL +GY DQQKAAIQ+ERA
Sbjct: 900 QPTRTIVSN-SEQPAGIGS-APCVAPVGPRPQDA--WGDVEHLFEGYSDQQKAAIQRERA 955
Query: 1609 RRIAEQNKMFAARKXXXXXXXXXXXLNSAKFVEVDPIHEEILRKKEEQDKQRPERHLYRI 1430
RRI EQ KMFAARK LNSAKFVEVDP+H+EILRKKEEQD+++P RHL+R
Sbjct: 956 RRIEEQKKMFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPYRHLFRF 1015
Query: 1429 PHMGMWTKLRPGIWNFLEKASQLYELHLYTMGNKLYATEMAKVLDPKGTLFSGRVISRGD 1250
PHMGMWTKLRPGIWNFLEKAS+LYELHLYTMGNKLYATEMAKVLDP G LF+GRVISRGD
Sbjct: 1016 PHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGVLFNGRVISRGD 1075
Query: 1249 DGDPFDGDERVPKSKDLDGVLGMESAVVIIDDSLRVWPHNKLNLIVVERYTYFPSSRRQF 1070
D D FD DERVPKSKDL+GVLGMESAVVIIDDS+RVWPHNKLNLIVVERY YFP SRRQF
Sbjct: 1076 DTDSFDSDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQF 1135
Query: 1069 GLLGPSLLEIDHDERPEDGTLASSLAVIERIHRNFFSHHSLNEIDVRNILAAEQRKILAG 890
GL GPSLLEIDHDERPEDGTLA SLAVIE+IH++FF+H SL++ DVRNILA+EQRKILAG
Sbjct: 1136 GLPGPSLLEIDHDERPEDGTLACSLAVIEKIHQHFFTHPSLDDADVRNILASEQRKILAG 1195
Query: 889 CKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTNQIDEQVTHVVANSRGTDKVNWALSTG 710
C+IVFSRVFPVGEANPHLHPLWQTAEQFGA CTNQIDEQVTHVVANS GTDKVNWALSTG
Sbjct: 1196 CRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTG 1255
Query: 709 RFVVYPGWVEASALLYRRANEQDFAV 632
RFVVYPGWVEASALLYRRANEQDFA+
Sbjct: 1256 RFVVYPGWVEASALLYRRANEQDFAI 1281
>ref|XP_008678156.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Zea mays]
Length = 1369
Score = 934 bits (2413), Expect = 0.0
Identities = 559/1127 (49%), Positives = 687/1127 (60%), Gaps = 49/1127 (4%)
Frame = -3
Query: 3865 DKRFGXXXXXXXXXXXXXXASSFEEVCSRLQKCFASLKQMFSQGHG----PVLDVLVQQA 3698
D+R G SFE C+RL CF +LK +F + +L+ L+QQA
Sbjct: 330 DQRVGSILEELEMVSIEEAEKSFEGACARLHTCFENLKPLFQELENGSPMAILEPLMQQA 389
Query: 3697 FMGIQTVYSAFSSGNLKKMDQNKELLLRLLIHIKNQYSVFLTPEQVKEIDVRVHALASES 3518
F+GI T+ + + NL + +QNK LL+LL HIKN+YS LTPEQ +E+D RV L
Sbjct: 390 FIGIDTLTTVANLYNLPRREQNKTTLLKLLFHIKNRYSDMLTPEQREEMDSRVRKLVF-- 447
Query: 3517 VSVGKTTGNVNGSADPAERSGISEEKLRLDPRGSHVVRNNDGR----------ACLSKLE 3368
G + +DP+ G S + P G V N G + L +LE
Sbjct: 448 -------GEKDNVSDPSTSCGTSAINVSA-PSGQ--VSNTGGLPFESGAANLFSSLPRLE 497
Query: 3367 LPTNSRSRVDFSPLLNLHADYDEDSLPSPTRDNAPPLPVLKPIGFGTGAAARTQLIAPKN 3188
+P S PLLNLHADYDE+SLPSPTRDNAPP P LKPIGFG +L
Sbjct: 498 VPAKRNS-----PLLNLHADYDENSLPSPTRDNAPPFPALKPIGFGAFPMVPEKLSFLDR 552
Query: 3187 VDTENGTLHPYITDAFKAVSSYQQKYGKNSIIASNRLPSPTPSEDGN---DGGDDIHGEV 3017
V+ +L+P + D KAVSSYQQKYG+ S+ S+ LPSPTPS D D G DI +V
Sbjct: 553 VEPTKNSLYPPLNDPLKAVSSYQQKYGQKSVYPSDDLPSPTPSGDEGKPADKGGDIFSDV 612
Query: 3016 SSSSLAGNVRTVGPSINAANTNSSGSFQMPSVNSTGGFQMPSVNSTGGFQMLSVNSTGGF 2837
SS V SI +T+ + Q +V+S+ S + Q ++V+S+G
Sbjct: 613 SSFP-------VPKSIVLPSTSQMPASQPSTVSSSSISYASSTSQMAASQPITVSSSG-- 663
Query: 2836 PMAPVNSLAAQMAPINSSAAQMAPVKAVGQVGLEPNHVIKASAKSRDPRLRFMNSEVGNA 2657
I+ ++ K + Q PNH IKA++KSRDPRLRF+N + A
Sbjct: 664 --------------ISYASGPPGFAKQIEQSTAGPNHAIKAASKSRDPRLRFLNRDSAGA 709
Query: 2656 P-----------QNGIAAGLS-NSRKHKTVDDHVPDDHNLKRQKNGSKSSRDVQVTSGRG 2513
++G G+S +RK K VDD DD+ LKR + G + RD+Q T
Sbjct: 710 TDVNWRANFSELKDGNLGGVSVGNRKQKAVDDPQVDDNALKRFRGGIANQRDMQPTGNPN 769
Query: 2512 GWIE-----DSGSIASQTSNRVQSNKNMAVGNRNTGGEVGCDGRXXXXXXXXXXXXXSVP 2348
+ S SI +T Q+ P
Sbjct: 770 QLMNIRAPTHSSSINMKTLQPPQTT---------------------------------AP 796
Query: 2347 NMSTGAAPVVSLPS-LLKDIAVNPTMLMQLVKMEQQRIAAEAQQ--KSAGPAVNGLSNAI 2177
++S AAP V LP LLKDIAVNP +LM L++ME Q+ +A Q S+G NG++ +
Sbjct: 797 HVS--AAPAVPLPPMLLKDIAVNPALLMHLIQMEHQKKSASESQGGMSSGMTNNGIAGMV 854
Query: 2176 SS------VSEAGQNPASKPQMPPQT---TSMNDMGKIRMKPRDPRRILHXXXXXXXXXX 2024
+ ++EA Q P+ +PQ+P QT S ND G +RMKPRDPRRILH
Sbjct: 855 FTPGNAPKITEAAQVPSVRPQVPVQTPPLNSQNDGGIVRMKPRDPRRILHNNIAQKSDAM 914
Query: 2023 XXEPIKTSGSLSSDAQSSKDHSTVQEQGEQSQAIVLPSQPIVQPDISRQFTKNLQNLADL 1844
E +K +G+ D+Q +KD +T +PSQP + I+R F+ D
Sbjct: 915 SLEQVKNNGTTQPDSQGTKDQTTP-----------VPSQPALPSSIARPFSSAKH--VDP 961
Query: 1843 VSNSQASAPSI-AGTQNISQ--PIASKISNDTTEPKTVPALSNQGGPMSSASQSANPWGD 1673
VSNSQ +A +I A TQ +S + +++ + + A+Q +PWGD
Sbjct: 962 VSNSQLAATAIMAPTQALSSVNKVDPRLAVEQNGQNADATTNGASATTLEATQPVSPWGD 1021
Query: 1672 VDHLLDGYDDQQKAAIQKERARRIAEQNKMFAARKXXXXXXXXXXXLNSAKFVEVDPIHE 1493
VDHLLDGYDDQQKA IQKERARRI EQ+KMF+ARK LNSAKF+EV+PIHE
Sbjct: 1022 VDHLLDGYDDQQKALIQKERARRITEQHKMFSARKLCLVLDLDHTLLNSAKFIEVEPIHE 1081
Query: 1492 EILRKKEEQDKQRPERHLYRIPHMGMWTKLRPGIWNFLEKASQLYELHLYTMGNKLYATE 1313
E+LRKKEEQD+ PERHLYR HM MWTKLRPGIWNFL+KAS L+ELHLYTMGNKLYATE
Sbjct: 1082 EMLRKKEEQDRTLPERHLYRFHHMNMWTKLRPGIWNFLQKASNLFELHLYTMGNKLYATE 1141
Query: 1312 MAKVLDPKGTLFSGRVISRGDDGDPFDGDERVPKSKDLDGVLGMESAVVIIDDSLRVWPH 1133
MAKVLDP GTLF+GRVISRGDDGDPFD DERVPKSKDLDGVLGMESAVVIIDDS+RVWPH
Sbjct: 1142 MAKVLDPTGTLFAGRVISRGDDGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSVRVWPH 1201
Query: 1132 NKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHRNFFSHH 953
N+ NLIVVERYTYFP SRRQFGL GPSLLEID DERPEDGTLASSLAVIERIH NFFSH
Sbjct: 1202 NRHNLIVVERYTYFPCSRRQFGLPGPSLLEIDRDERPEDGTLASSLAVIERIHHNFFSHP 1261
Query: 952 SLNEIDVRNILAAEQRKILAGCKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTNQIDEQ 773
+LNE DVR+ILA+EQR+IL GC+IVFSRVFPVG+A+PHLHPLWQTAEQFGA CTN +D++
Sbjct: 1262 NLNEADVRSILASEQRRILTGCRIVFSRVFPVGDASPHLHPLWQTAEQFGAVCTNLVDDR 1321
Query: 772 VTHVVANSRGTDKVNWALSTGRFVVYPGWVEASALLYRRANEQDFAV 632
VTH+VANS GTDKVNWALS G+FVV+PGWVEASALLYRRANE DFAV
Sbjct: 1322 VTHIVANSPGTDKVNWALSKGKFVVHPGWVEASALLYRRANEHDFAV 1368
>gb|AFW60862.1| hypothetical protein ZEAMMB73_799152, partial [Zea mays]
Length = 1234
Score = 931 bits (2407), Expect = 0.0
Identities = 555/1105 (50%), Positives = 682/1105 (61%), Gaps = 49/1105 (4%)
Frame = -3
Query: 3802 SFEEVCSRLQKCFASLKQMFSQGHG----PVLDVLVQQAFMGIQTVYSAFSSGNLKKMDQ 3635
SFE C+RL CF +LK +F + +L+ L+QQAF+GI T+ + + NL + +Q
Sbjct: 218 SFEGACARLHTCFENLKPLFQELENGSPMAILEPLMQQAFIGIDTLTTVANLYNLPRREQ 277
Query: 3634 NKELLLRLLIHIKNQYSVFLTPEQVKEIDVRVHALASESVSVGKTTGNVNGSADPAERSG 3455
NK LL+LL HIKN+YS LTPEQ +E+D RV L G + +DP+ G
Sbjct: 278 NKTTLLKLLFHIKNRYSDMLTPEQREEMDSRVRKLVF---------GEKDNVSDPSTSCG 328
Query: 3454 ISEEKLRLDPRGSHVVRNNDGR----------ACLSKLELPTNSRSRVDFSPLLNLHADY 3305
S + P G V N G + L +LE+P S PLLNLHADY
Sbjct: 329 TSAINVSA-PSGQ--VSNTGGLPFESGAANLFSSLPRLEVPAKRNS-----PLLNLHADY 380
Query: 3304 DEDSLPSPTRDNAPPLPVLKPIGFGTGAAARTQLIAPKNVDTENGTLHPYITDAFKAVSS 3125
DE+SLPSPTRDNAPP P LKPIGFG +L V+ +L+P + D KAVSS
Sbjct: 381 DENSLPSPTRDNAPPFPALKPIGFGAFPMVPEKLSFLDRVEPTKNSLYPPLNDPLKAVSS 440
Query: 3124 YQQKYGKNSIIASNRLPSPTPSEDGN---DGGDDIHGEVSSSSLAGNVRTVGPSINAANT 2954
YQQKYG+ S+ S+ LPSPTPS D D G DI +VSS V SI +T
Sbjct: 441 YQQKYGQKSVYPSDDLPSPTPSGDEGKPADKGGDIFSDVSSFP-------VPKSIVLPST 493
Query: 2953 NSSGSFQMPSVNSTGGFQMPSVNSTGGFQMLSVNSTGGFPMAPVNSLAAQMAPINSSAAQ 2774
+ + Q +V+S+ S + Q ++V+S+G I+ ++
Sbjct: 494 SQMPASQPSTVSSSSISYASSTSQMAASQPITVSSSG----------------ISYASGP 537
Query: 2773 MAPVKAVGQVGLEPNHVIKASAKSRDPRLRFMNSEVGNAP-----------QNGIAAGLS 2627
K + Q PNH IKA++KSRDPRLRF+N + A ++G G+S
Sbjct: 538 PGFAKQIEQSTAGPNHAIKAASKSRDPRLRFLNRDSAGATDVNWRANFSELKDGNLGGVS 597
Query: 2626 -NSRKHKTVDDHVPDDHNLKRQKNGSKSSRDVQVTSGRGGWIE-----DSGSIASQTSNR 2465
+RK K VDD DD+ LKR + G + RD+Q T + S SI +T
Sbjct: 598 VGNRKQKAVDDPQVDDNALKRFRGGIANQRDMQPTGNPNQLMNIRAPTHSSSINMKTLQP 657
Query: 2464 VQSNKNMAVGNRNTGGEVGCDGRXXXXXXXXXXXXXSVPNMSTGAAPVVSLPS-LLKDIA 2288
Q+ P++S AAP V LP LLKDIA
Sbjct: 658 PQTT---------------------------------APHVS--AAPAVPLPPMLLKDIA 682
Query: 2287 VNPTMLMQLVKMEQQRIAAEAQQ--KSAGPAVNGLSNAISS------VSEAGQNPASKPQ 2132
VNP +LM L++ME Q+ +A Q S+G NG++ + + ++EA Q P+ +PQ
Sbjct: 683 VNPALLMHLIQMEHQKKSASESQGGMSSGMTNNGIAGMVFTPGNAPKITEAAQVPSVRPQ 742
Query: 2131 MPPQT---TSMNDMGKIRMKPRDPRRILHXXXXXXXXXXXXEPIKTSGSLSSDAQSSKDH 1961
+P QT S ND G +RMKPRDPRRILH E +K +G+ D+Q +KD
Sbjct: 743 VPVQTPPLNSQNDGGIVRMKPRDPRRILHNNIAQKSDAMSLEQVKNNGTTQPDSQGTKDQ 802
Query: 1960 STVQEQGEQSQAIVLPSQPIVQPDISRQFTKNLQNLADLVSNSQASAPSI-AGTQNISQ- 1787
+T +PSQP + I+R F+ D VSNSQ +A +I A TQ +S
Sbjct: 803 TTP-----------VPSQPALPSSIARPFSSAKH--VDPVSNSQLAATAIMAPTQALSSV 849
Query: 1786 -PIASKISNDTTEPKTVPALSNQGGPMSSASQSANPWGDVDHLLDGYDDQQKAAIQKERA 1610
+ +++ + + A+Q +PWGDVDHLLDGYDDQQKA IQKERA
Sbjct: 850 NKVDPRLAVEQNGQNADATTNGASATTLEATQPVSPWGDVDHLLDGYDDQQKALIQKERA 909
Query: 1609 RRIAEQNKMFAARKXXXXXXXXXXXLNSAKFVEVDPIHEEILRKKEEQDKQRPERHLYRI 1430
RRI EQ+KMF+ARK LNSAKF+EV+PIHEE+LRKKEEQD+ PERHLYR
Sbjct: 910 RRITEQHKMFSARKLCLVLDLDHTLLNSAKFIEVEPIHEEMLRKKEEQDRTLPERHLYRF 969
Query: 1429 PHMGMWTKLRPGIWNFLEKASQLYELHLYTMGNKLYATEMAKVLDPKGTLFSGRVISRGD 1250
HM MWTKLRPGIWNFL+KAS L+ELHLYTMGNKLYATEMAKVLDP GTLF+GRVISRGD
Sbjct: 970 HHMNMWTKLRPGIWNFLQKASNLFELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISRGD 1029
Query: 1249 DGDPFDGDERVPKSKDLDGVLGMESAVVIIDDSLRVWPHNKLNLIVVERYTYFPSSRRQF 1070
DGDPFD DERVPKSKDLDGVLGMESAVVIIDDS+RVWPHN+ NLIVVERYTYFP SRRQF
Sbjct: 1030 DGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNRHNLIVVERYTYFPCSRRQF 1089
Query: 1069 GLLGPSLLEIDHDERPEDGTLASSLAVIERIHRNFFSHHSLNEIDVRNILAAEQRKILAG 890
GL GPSLLEID DERPEDGTLASSLAVIERIH NFFSH +LNE DVR+ILA+EQR+IL G
Sbjct: 1090 GLPGPSLLEIDRDERPEDGTLASSLAVIERIHHNFFSHPNLNEADVRSILASEQRRILTG 1149
Query: 889 CKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTNQIDEQVTHVVANSRGTDKVNWALSTG 710
C+IVFSRVFPVG+A+PHLHPLWQTAEQFGA CTN +D++VTH+VANS GTDKVNWALS G
Sbjct: 1150 CRIVFSRVFPVGDASPHLHPLWQTAEQFGAVCTNLVDDRVTHIVANSPGTDKVNWALSKG 1209
Query: 709 RFVVYPGWVEASALLYRRANEQDFA 635
+FVV+PGWVEASALLYRRANE DFA
Sbjct: 1210 KFVVHPGWVEASALLYRRANEHDFA 1234
>ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
gi|550343308|gb|EEE79627.2| hypothetical protein
POPTR_0003s16280g [Populus trichocarpa]
Length = 1247
Score = 921 bits (2380), Expect = 0.0
Identities = 561/1117 (50%), Positives = 684/1117 (61%), Gaps = 60/1117 (5%)
Frame = -3
Query: 3802 SFEEVCSRLQKCFASLKQMF--SQGHGPVLDVLVQQAFMGIQTVYSAFSSGNLKKMDQNK 3629
SFE VC +L SLK++ ++ P D LV+ F I V S FSS N K +QNK
Sbjct: 197 SFEAVCLKLHNALESLKELVRVNENGFPSKDSLVRLLFTAIGAVNSFFSSMNQKLKEQNK 256
Query: 3628 ELLLRLLIHIKNQYSVFLTPEQVKEI------DVRVHALASESVSVGKTTGNVNGSADPA 3467
+ +R L + + F +PE KE+ D R+ +L + ++ N A
Sbjct: 257 GVFMRFLSLVNSHDPSFFSPEHTKEVCDFCNFDFRIVSLCYDLTTM-------NRLPSAA 309
Query: 3466 ERSGISEEKLRLDPRGSHVVRNNDGRACLSKLELPTNSRSRVDFSPLLNLHADYDEDSLP 3287
E ++ ++P V + +SR PLL+L +DEDSLP
Sbjct: 310 ESFVHNKPNFSIEPPKPGV----------------PSFKSRGVLLPLLDLKKFHDEDSLP 353
Query: 3286 SPTRDNAPPLPVLKPIGFGTGAAARTQLIAPKNVD-TENGTLHPYITDAFKAVSSYQQKY 3110
SPTR+ AP PV + + G G + + L PK TE +HPY TDA KAVSSYQ+K+
Sbjct: 354 SPTRETAPSFPVQRLLPIGDGMIS-SGLPVPKVASITEEPRVHPYETDALKAVSSYQKKF 412
Query: 3109 GKNSIIASNRLPSPTPSEDGNDGGDDIHGEVSSSSLAGNVRTVGPSINAANTNSSGSFQM 2930
NS +N LPSPTPSE+ +G D GEVSSSS N RTV P ++ + S
Sbjct: 413 NLNSFF-TNELPSPTPSEESGNGDGDTAGEVSSSSTV-NYRTVNPPVSDRKSASPSPSPP 470
Query: 2929 PSVNSTGGFQMPSVNSTGGFQMLSVNSTGGFPMAPVNSLAAQMAPINSSAAQMAPVKAVG 2750
P P P L NSS + P +
Sbjct: 471 PPPPP--------------------------PPPPPPHLN------NSSIRVVIPTRNSA 498
Query: 2749 QVGLEPNHVIKASAKSRDPRLRFMNSE-------------VGNAPQNGIAAGLSNSRKHK 2609
V + +KASAKSRDPRLR++N++ V N P+ + ++ SRK K
Sbjct: 499 PVSSGTSSTVKASAKSRDPRLRYVNTDASALDQNQRTLLMVNNPPRAEPSGAIAGSRKQK 558
Query: 2608 TVDDHVPDDHNLKRQKNGSKS---SRDVQVTSGRGGWIEDSGSIASQTSNRVQSNKNMAV 2438
+++ V D +LKRQ+N + RD++ +G GGW+ED+ QT N+ Q +N
Sbjct: 559 -IEEDVLDGTSLKRQRNSFDNFGVVRDIRSMTGTGGWLEDTDMAEPQTVNKNQWAENAEP 617
Query: 2437 GNRNTGGEVGCDGRXXXXXXXXXXXXXSVPNMSTGA------APV-----VSLPSLLKDI 2291
G R G V C VP M APV SLP LLKDI
Sbjct: 618 GQRINNGVV-CPSTGSVMSSVSCSGNVQVPVMGINTIAGSEQAPVTSTTTASLPDLLKDI 676
Query: 2290 AVNPTMLMQLVKM-EQQRIAAEAQQKSAGPA--------VNGLSNAISSVSEAGQNP--- 2147
VNPTML+ ++KM +QQR+A + QQK A PA N + AI V+ P
Sbjct: 677 TVNPTMLINILKMGQQQRLALDGQQKLADPAKSTSHPPSSNTVLGAIPEVNAVSSLPSGI 736
Query: 2146 ----ASKPQMPPQTTSMNDMGKIRMKPRDPRRILHXXXXXXXXXXXXEPIKTSGSLSSDA 1979
A K Q P Q + ++ GKIRMKPRDPRR+LH E KT+ +L+S
Sbjct: 737 LPRSAGKAQGPSQIATTDESGKIRMKPRDPRRVLHNNALQRAGSLGSEQFKTT-TLTSTT 795
Query: 1978 QSSKDHSTVQEQGEQSQAIVLPSQPIVQPDISRQFTKNLQNLADLVSNSQASAPSIAGTQ 1799
Q +KD+ +Q+Q ++ +P+V PDIS FTK+L+N+AD+VS SQ +Q
Sbjct: 796 QGTKDNQNLQKQEGLAEL-----KPVVPPDISSPFTKSLKNIADIVSVSQTCTTPPFVSQ 850
Query: 1798 NI-SQPIASKISNDTTEPKTVPALSNQG-GPMSS------ASQSANPWGDVDHLLDGYDD 1643
N+ SQP+ +I +D + KT + S+Q GP SS +S S N W DV+HL +GYDD
Sbjct: 851 NVASQPV--QIKSDRVDGKTGISNSDQKMGPASSPEVVAASSLSQNTWEDVEHLFEGYDD 908
Query: 1642 QQKAAIQKERARRIAEQNKMFAARKXXXXXXXXXXXLNSAKFVEVDPIHEEILRKKEEQD 1463
QQKAAIQ+ERARRI EQ K+FAARK LNSAKFVEVDP+H+EILRKKEEQD
Sbjct: 909 QQKAAIQRERARRIEEQKKLFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQD 968
Query: 1462 KQRPERHLYRIPHMGMWTKLRPGIWNFLEKASQLYELHLYTMGNKLYATEMAKVLDPKGT 1283
+++P RHL+R PHMGMWTKLRPGIWNFLEKAS+LYELHLYTMGNKLYATEMAKVLDPKG
Sbjct: 969 REKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGV 1028
Query: 1282 LFSGRVISRGDDGDPFDGDERVPKSKDLDGVLGMESAVVIIDDSLRVWPHNKLNLIVVER 1103
LF+GRV+SRGDDGD DGDERVPKSKDL+GVLGMES VVIIDDSLRVWPHNKLNLIVVER
Sbjct: 1029 LFAGRVVSRGDDGDLLDGDERVPKSKDLEGVLGMESGVVIIDDSLRVWPHNKLNLIVVER 1088
Query: 1102 YTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHRNFFSHHSLNEIDVRNI 923
Y YFP SRRQFGL GPSLLEIDHDERPEDGTLA SLAVIERIH+NFF+HHSL+E DVRNI
Sbjct: 1089 YIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLACSLAVIERIHQNFFTHHSLDEADVRNI 1148
Query: 922 LAAEQRKILAGCKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTNQIDEQVTHVVANSRG 743
LA+EQRKILAGC+IVFSRVFPVGE NPHLHPLWQ+AEQFGA CTNQIDEQVTHVVANS G
Sbjct: 1149 LASEQRKILAGCRIVFSRVFPVGEVNPHLHPLWQSAEQFGAVCTNQIDEQVTHVVANSLG 1208
Query: 742 TDKVNWALSTGRFVVYPGWVEASALLYRRANEQDFAV 632
TDKVNWALSTGRFVV+PGWVEASALLYRRANEQDFA+
Sbjct: 1209 TDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAI 1245
>ref|XP_010656789.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
isoform X3 [Vitis vinifera]
Length = 1273
Score = 920 bits (2379), Expect = 0.0
Identities = 548/1110 (49%), Positives = 688/1110 (61%), Gaps = 53/1110 (4%)
Frame = -3
Query: 3802 SFEEVCSRLQKCFASLKQMFSQ-----GHGPVLDVLVQQAFMGIQTVYSAFSSGNLKKMD 3638
SF VCSRLQ SL+++F + P D L QQ I+ + F S N + +
Sbjct: 218 SFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQKE 277
Query: 3637 QNKELLLRLLIHIKNQYSVFLTPEQVKEIDVRVHAL----------ASESVSVGKTTGNV 3488
NK++ RLL ++ S + + +KE++V + L AS+ V+ + T +
Sbjct: 278 LNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSFLDTPAAQSSAEASDKVNDVQVTDGM 337
Query: 3487 N-----GSADPAERSGISEEKLRLDPRGSHVVRNNDGRACLSKLELPTNSRSRVDFSPLL 3323
N S + + R+ S +KL LD N+ A L ++SR R F PLL
Sbjct: 338 NRNILDSSVESSGRAFASAKKLSLDSISVESYNQNNPDALKPGL---SSSRGRFIFGPLL 394
Query: 3322 NLHADYDEDSLPSPTRDNAPPLPVLKPIGFGTGAAARTQLIAPKNV-DTENGTLHPYITD 3146
+LH D+DEDSLPSPT PV K ++L+ K +T++ +HPY TD
Sbjct: 395 DLHKDHDEDSLPSPTGKAPQCFPVNK-----------SELVTAKVAHETQDSIMHPYETD 443
Query: 3145 AFKAVSSYQQKYGKNSIIASNRLPSPTPSEDGNDGGDDIHGEVSSSSLAGNVRTVGPSIN 2966
A KAVS+YQQK+G S + ++LPSPTPSE+ D DI GEVSSSS +I+
Sbjct: 444 ALKAVSTYQQKFGLTSFLPIDKLPSPTPSEESGDTYGDISGEVSSSS----------TIS 493
Query: 2965 AANTNSSGSFQMPSVNSTGGFQMPSVNSTGGFQMLSVNSTGGFPMAPVNSLAAQMAPINS 2786
A T ++ + P V+S P ++S+ G + SL + ++S
Sbjct: 494 APITANAPALGHPIVSSA-----PQMDSS---------IVQGPTVGRNTSLVSSGPHLDS 539
Query: 2785 SAAQMAPV-KAVGQVGLEPNHVIKASAKSRDPRLRFMNSEVG-------------NAPQN 2648
S Q V + G V N +++ASAKSRDPRLR +S+ G N+P+
Sbjct: 540 SVVQGLVVPRNTGAVNSRFNSILRASAKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKV 599
Query: 2647 GIAAGLSNSRKHKTVDDHVPDDHNLKRQKNGSKSS---RDVQVTSGRGGWIEDSGSIASQ 2477
+ +SRK K+ ++ + D KRQ+NG S RD Q GGW+EDS ++ Q
Sbjct: 600 DPLGEIVSSRKQKSAEEPLLDGPVTKRQRNGLTSPATVRDAQTVVASGGWLEDSNTVIPQ 659
Query: 2476 TSNRVQSNKNMAVGNRNTGGEVGCDGRXXXXXXXXXXXXXSVPNMSTGAAPVVSLPSLLK 2297
NR Q +N + +V G +P ++T SL SLLK
Sbjct: 660 MMNRNQLIENTGTDPKKLESKVTVTGIGCDKPYVTVNGNEHLPVVATSTT--ASLQSLLK 717
Query: 2296 DIAVNPTMLMQLV-KMEQQRIAAEAQQKSAGPAVNGLSNAISSVSEAGQNPASKPQMP-- 2126
DIAVNP + M + K+EQQ+ A+ P N + + S A P++ Q P
Sbjct: 718 DIAVNPAVWMNIFNKVEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAG 777
Query: 2125 ----PQTTSMNDMGKIRMKPRDPRRILHXXXXXXXXXXXXEPIKTSGSLSSDAQSSKDHS 1958
PQT M++ GK+RMKPRDPRRILH S S + S + +
Sbjct: 778 ALQVPQTGPMDESGKVRMKPRDPRRILHA---------------NSFQRSGSSGSEQFKT 822
Query: 1957 TVQEQGEQSQAIVLPSQPIVQPDISRQFTKNLQNLADLVSNSQASA-----PSIAGTQNI 1793
Q+Q +Q++ +PS + PDIS+QFTKNL+N+ADL+S SQAS+ P I +Q++
Sbjct: 823 NAQKQEDQTETKSVPSHSVNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQSV 882
Query: 1792 SQPIASKISNDTTEPKTVPALSNQGGPMSSAS---QSANPWGDVDHLLDGYDDQQKAAIQ 1622
Q ++ T + L+ G SA+ QS N WGDV+HL DGYDDQQKAAIQ
Sbjct: 883 -QVNTDRMDVKATVSDSGDQLTANGSKPESAAGPPQSKNTWGDVEHLFDGYDDQQKAAIQ 941
Query: 1621 KERARRIAEQNKMFAARKXXXXXXXXXXXLNSAKFVEVDPIHEEILRKKEEQDKQRPERH 1442
+ERARRI EQ KMF+ARK LNSAKFVEVDP+H+EILRKKEEQD+++ +RH
Sbjct: 942 RERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRH 1001
Query: 1441 LYRIPHMGMWTKLRPGIWNFLEKASQLYELHLYTMGNKLYATEMAKVLDPKGTLFSGRVI 1262
L+R PHMGMWTKLRPGIWNFLEKAS+LYELHLYTMGNKLYATEMAKVLDPKG LF+GRVI
Sbjct: 1002 LFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVI 1061
Query: 1261 SRGDDGDPFDGDERVPKSKDLDGVLGMESAVVIIDDSLRVWPHNKLNLIVVERYTYFPSS 1082
S+GDDGD DGDERVPKSKDL+GVLGMESAVVIIDDS+RVWPHNKLNLIVVERYTYFP S
Sbjct: 1062 SKGDDGDVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCS 1121
Query: 1081 RRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHRNFFSHHSLNEIDVRNILAAEQRK 902
RRQFGL GPSLLEIDHDERPEDGTLASSLAVIERIH++FFS+ +L+E+DVRNILA+EQRK
Sbjct: 1122 RRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRK 1181
Query: 901 ILAGCKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTNQIDEQVTHVVANSRGTDKVNWA 722
ILAGC+IVFSRVFPVGEANPHLHPLWQTAE FGA CTNQIDEQVTHVVANS GTDKVNWA
Sbjct: 1182 ILAGCRIVFSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWA 1241
Query: 721 LSTGRFVVYPGWVEASALLYRRANEQDFAV 632
LSTGRFVV+PGWVEASALLYRRANEQDFA+
Sbjct: 1242 LSTGRFVVHPGWVEASALLYRRANEQDFAI 1271
>ref|XP_011036157.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Populus euphratica]
Length = 1100
Score = 919 bits (2376), Expect = 0.0
Identities = 561/1130 (49%), Positives = 693/1130 (61%), Gaps = 73/1130 (6%)
Frame = -3
Query: 3802 SFEEVCSRLQKCFASLKQMFS--QGHGPVLDVLVQQAFMGIQTVYSAFSSGNLKKMDQNK 3629
SFE VC +L K SLK++ P D LVQ FM I V S F S N K +QNK
Sbjct: 28 SFEAVCLKLHKVLESLKELVGGKDNSFPSKDGLVQLLFMAIGVVNSVFCSMNKKLKEQNK 87
Query: 3628 ELLLRLLIHIKNQYSVFLTPEQVKEIDVRVHALASESVSVGKTTG-----------NVNG 3482
+ R + + Y+ F +P Q KEI++ V ++ S + TG N N
Sbjct: 88 GVFSRFFSLLNSHYTPFFSPGQNKEIELMVSSMGSYYILSSSRTGEDREAQVSGEVNENH 147
Query: 3481 SADPAERSG----ISEEKLRLDPRGSHVVRNNDGRACLSKLELPT-----NSRSRVDFSP 3329
+ A+ +G I EKL P V+N ++ +E P + +SR P
Sbjct: 148 NDSLAKTAGYDLTIMNEKL---PAAGTFVQNKPNKS----IEAPKPPGVPSFKSRGVLLP 200
Query: 3328 LLNLHADYDEDSLPSPTRDNAPPLPVLKPIGFGTGAAARTQLIAPKNVDT-ENGTLHPYI 3152
LL+L +DEDSLPSPT++ P PV + G G + ++L PK E +HPY
Sbjct: 201 LLDLKKYHDEDSLPSPTQETTP-FPVQRLFAIGDGMVS-SELSVPKMAPVAEEPRMHPYE 258
Query: 3151 TDAFKAVSSYQQKYGKNSIIASNRLPSPTPSEDGNDGGDDIHGEVSSSSLAGNVRTVGPS 2972
TDA KAVSSYQQK+ +NS +N LPSPTPSE+ +G D GEVSSSS N RTV P
Sbjct: 259 TDALKAVSSYQQKFNRNSFF-TNELPSPTPSEESGNGDVDTAGEVSSSSTVVNYRTVNPP 317
Query: 2971 INAANTNSSGSFQMPSVNSTGGFQMPSVNSTGGFQMLSVNSTGGFPMAPVNSLAAQMAPI 2792
++ N++ P P +S P
Sbjct: 318 VSDQK----------------------------------NASPPPPPPPPSS-----HPD 338
Query: 2791 NSSAAQMAPVKAVGQVGLEPNHVIKASAKSRDPRLRFMNSE-------------VGNAPQ 2651
+S+ + P + V P+ IKASAKSRDPRLR++N + V N P+
Sbjct: 339 SSNILGVVPTRNCAPVSSGPSSTIKASAKSRDPRLRYVNIDASALDHNQRALPMVNNLPR 398
Query: 2650 NGIAAGLSNSRKHKTVDDHVPDDHNLKRQKNGSK---SSRDVQVTSGRGGWIEDSGSIAS 2480
A + S+K K +++ V D +LKRQ+N + RD++ +G GGW+ED+
Sbjct: 399 VEPAGAIVGSKKQK-IEEDVLDGPSLKRQRNSFDNYGAVRDIESMTGTGGWLEDTDMAEP 457
Query: 2479 QTSNRVQSNKNMAVGNRNTGGEVGCDGRXXXXXXXXXXXXXSVPNMS----TG------- 2333
QT N+ Q +N+ G+R G V C P M TG
Sbjct: 458 QTVNKNQWAENVEPGHRINNGFV-CPSSGSVKSNVNGSGNAQSPFMGISNITGSEQAQVT 516
Query: 2332 AAPVVSLPSLLKDIAVNPTMLMQLVKM-EQQRIAAEAQQKSAGPA--------VNGLSNA 2180
+ SLP LLKDIAVNPTML+ ++KM +QQR+A + QQ + PA N + A
Sbjct: 517 STATTSLPDLLKDIAVNPTMLINILKMGQQQRLALDGQQTLSDPAKSTSHPSISNSVLGA 576
Query: 2179 ISSVSEAGQNPA------SKPQMPPQTTSMNDMGKIRMKPRDPRRILHXXXXXXXXXXXX 2018
IS+V+ A P+ + Q+P Q + ++ GKIRMKPRDPRR LH
Sbjct: 577 ISTVNVASSQPSGILPRPAGTQVPSQIATSDESGKIRMKPRDPRRFLHNNSLQRAGSLGS 636
Query: 2017 EPIKTSGSLSSDAQSSKDHSTVQEQGEQSQAIVLPSQPIVQPDISRQFTKNLQNLADLVS 1838
E KT+ +L+ Q +KD VQEQ ++ + V PDIS FTK+L+N+AD++S
Sbjct: 637 EQFKTT-TLTPTTQGTKDDQNVQEQEGLAEL-----KSTVPPDISFPFTKSLENIADILS 690
Query: 1837 NSQASAPSIAGTQNI-SQPIASKISNDTTEPKTVPALSNQ-GGPMSSA------SQSANP 1682
SQAS +QN+ SQP+ +K ++ + KT ++S+Q GP SSA S N
Sbjct: 691 VSQASTTPPFISQNVASQPMQTK--SERVDGKTGISISDQKTGPASSAEVVAASSHLQNT 748
Query: 1681 WGDVDHLLDGYDDQQKAAIQKERARRIAEQNKMFAARKXXXXXXXXXXXLNSAKFVEVDP 1502
W DV+HL +GYDDQQKAAIQ+ERARR+ EQ KMFAARK LNSAKFVEVDP
Sbjct: 749 WKDVEHLFEGYDDQQKAAIQRERARRMEEQKKMFAARKLCLVLDLDHTLLNSAKFVEVDP 808
Query: 1501 IHEEILRKKEEQDKQRPERHLYRIPHMGMWTKLRPGIWNFLEKASQLYELHLYTMGNKLY 1322
+H+EILRKKEEQD+++P RH++R PHMGMWTKLRPGIWNFLEKAS+L+ELHLYTMGNKLY
Sbjct: 809 VHDEILRKKEEQDREKPYRHIFRFPHMGMWTKLRPGIWNFLEKASKLFELHLYTMGNKLY 868
Query: 1321 ATEMAKVLDPKGTLFSGRVISRGDDGDPFDGDERVPKSKDLDGVLGMESAVVIIDDSLRV 1142
ATEMAKVLDPKG LF+GRVISRGDDGDPFDGDERVPKSKDL+GVLGMES VVIIDDS+RV
Sbjct: 869 ATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESGVVIIDDSVRV 928
Query: 1141 WPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHRNFF 962
WPHNKLNLIVVERY YFP SRRQFGL GPSLLEIDHDERPEDGTLA SLAVIE+IH+NFF
Sbjct: 929 WPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLACSLAVIEKIHQNFF 988
Query: 961 SHHSLNEIDVRNILAAEQRKILAGCKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTNQI 782
+H SL+E DVRNILA+EQRKIL GC+I+FSRVFPVGE PHLHPLWQ AEQFGA C NQI
Sbjct: 989 THRSLDEADVRNILASEQRKILGGCRILFSRVFPVGEVKPHLHPLWQMAEQFGAVCINQI 1048
Query: 781 DEQVTHVVANSRGTDKVNWALSTGRFVVYPGWVEASALLYRRANEQDFAV 632
DEQVTHVVANS GTDKVNWALSTGR VV+PGWVEASALLYRRANEQDFA+
Sbjct: 1049 DEQVTHVVANSLGTDKVNWALSTGRIVVHPGWVEASALLYRRANEQDFAI 1098
>ref|XP_010656786.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
isoform X2 [Vitis vinifera]
Length = 1276
Score = 917 bits (2370), Expect = 0.0
Identities = 549/1113 (49%), Positives = 688/1113 (61%), Gaps = 56/1113 (5%)
Frame = -3
Query: 3802 SFEEVCSRLQKCFASLKQMFSQ-----GHGPVLDVLVQQAFMGIQTVYSAFSSGNLKKMD 3638
SF VCSRLQ SL+++F + P D L QQ I+ + F S N + +
Sbjct: 218 SFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQKE 277
Query: 3637 QNKELLLRLLIHIKNQYSVFLTPEQVKEIDVRVHAL----------ASESVSVGKTTGNV 3488
NK++ RLL ++ S + + +KE++V + L AS+ V+ + T +
Sbjct: 278 LNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSFLDTPAAQSSAEASDKVNDVQVTDGM 337
Query: 3487 N-----GSADPAERSGISEEKLRLDPRGSHVVRNNDGRACLSKLELPTNSRSRVDFSPLL 3323
N S + + R+ S +KL LD N+ A L ++SR R F PLL
Sbjct: 338 NRNILDSSVESSGRAFASAKKLSLDSISVESYNQNNPDALKPGL---SSSRGRFIFGPLL 394
Query: 3322 NLHADYDEDSLPSPTRDNAPPLPVLKPIGFGTGAAARTQLIAPKNV-DTENGTLHPYITD 3146
+LH D+DEDSLPSPT PV K ++L+ K +T++ +HPY TD
Sbjct: 395 DLHKDHDEDSLPSPTGKAPQCFPVNK-----------SELVTAKVAHETQDSIMHPYETD 443
Query: 3145 AFKAVSSYQQKYGKNSIIASNRLPSPTPSEDGNDGGDDIHGEVSSSSLAGNVRTVGPSIN 2966
A KAVS+YQQK+G S + ++LPSPTPSE+ D DI GEVSSSS +I+
Sbjct: 444 ALKAVSTYQQKFGLTSFLPIDKLPSPTPSEESGDTYGDISGEVSSSS----------TIS 493
Query: 2965 AANTNSSGSFQMPSVNSTGGFQMPSVNSTGGFQMLSVNSTGGFPMAPVNSLAAQMAPINS 2786
A T ++ + P V+S P ++S+ G + SL + ++S
Sbjct: 494 APITANAPALGHPIVSSA-----PQMDSS---------IVQGPTVGRNTSLVSSGPHLDS 539
Query: 2785 SAAQMAPV-KAVGQVGLEPNHVIKASAKSRDPRLRFMNSEVG-------------NAPQN 2648
S Q V + G V N +++ASAKSRDPRLR +S+ G N+P+
Sbjct: 540 SVVQGLVVPRNTGAVNSRFNSILRASAKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKV 599
Query: 2647 GIAAGLSNSRKHKTVDDHVPDDHNLKRQKNGSKSS---RDVQVTSGRGGWIEDSGSIASQ 2477
+ +SRK K+ ++ + D KRQ+NG S RD Q GGW+EDS ++ Q
Sbjct: 600 DPLGEIVSSRKQKSAEEPLLDGPVTKRQRNGLTSPATVRDAQTVVASGGWLEDSNTVIPQ 659
Query: 2476 TSNRVQSNKNMAVGNRNTGGEVGCDGRXXXXXXXXXXXXXSVPNMSTGAAPVVSLPSLLK 2297
NR Q +N + +V G +P ++T SL SLLK
Sbjct: 660 MMNRNQLIENTGTDPKKLESKVTVTGIGCDKPYVTVNGNEHLPVVATSTT--ASLQSLLK 717
Query: 2296 DIAVNPTMLMQLV-KMEQQRIAAEAQQKSAGPAVNGLSNAISSVSEAGQNPASKPQMP-- 2126
DIAVNP + M + K+EQQ+ A+ P N + + S A P++ Q P
Sbjct: 718 DIAVNPAVWMNIFNKVEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAG 777
Query: 2125 ----PQTTSMN---DMGKIRMKPRDPRRILHXXXXXXXXXXXXEPIKTSGSLSSDAQSSK 1967
PQT MN + GK+RMKPRDPRRILH S S + S +
Sbjct: 778 ALQVPQTGPMNPQDESGKVRMKPRDPRRILHA---------------NSFQRSGSSGSEQ 822
Query: 1966 DHSTVQEQGEQSQAIVLPSQPIVQPDISRQFTKNLQNLADLVSNSQASA-----PSIAGT 1802
+ Q+Q +Q++ +PS + PDIS+QFTKNL+N+ADL+S SQAS+ P I +
Sbjct: 823 FKTNAQKQEDQTETKSVPSHSVNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQILSS 882
Query: 1801 QNISQPIASKISNDTTEPKTVPALSNQGGPMSSAS---QSANPWGDVDHLLDGYDDQQKA 1631
Q++ Q ++ T + L+ G SA+ QS N WGDV+HL DGYDDQQKA
Sbjct: 883 QSV-QVNTDRMDVKATVSDSGDQLTANGSKPESAAGPPQSKNTWGDVEHLFDGYDDQQKA 941
Query: 1630 AIQKERARRIAEQNKMFAARKXXXXXXXXXXXLNSAKFVEVDPIHEEILRKKEEQDKQRP 1451
AIQ+ERARRI EQ KMF+ARK LNSAKFVEVDP+H+EILRKKEEQD+++
Sbjct: 942 AIQRERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKS 1001
Query: 1450 ERHLYRIPHMGMWTKLRPGIWNFLEKASQLYELHLYTMGNKLYATEMAKVLDPKGTLFSG 1271
+RHL+R PHMGMWTKLRPGIWNFLEKAS+LYELHLYTMGNKLYATEMAKVLDPKG LF+G
Sbjct: 1002 QRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAG 1061
Query: 1270 RVISRGDDGDPFDGDERVPKSKDLDGVLGMESAVVIIDDSLRVWPHNKLNLIVVERYTYF 1091
RVIS+GDDGD DGDERVPKSKDL+GVLGMESAVVIIDDS+RVWPHNKLNLIVVERYTYF
Sbjct: 1062 RVISKGDDGDVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYF 1121
Query: 1090 PSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHRNFFSHHSLNEIDVRNILAAE 911
P SRRQFGL GPSLLEIDHDERPEDGTLASSLAVIERIH++FFS+ +L+E+DVRNILA+E
Sbjct: 1122 PCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASE 1181
Query: 910 QRKILAGCKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTNQIDEQVTHVVANSRGTDKV 731
QRKILAGC+IVFSRVFPVGEANPHLHPLWQTAE FGA CTNQIDEQVTHVVANS GTDKV
Sbjct: 1182 QRKILAGCRIVFSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKV 1241
Query: 730 NWALSTGRFVVYPGWVEASALLYRRANEQDFAV 632
NWALSTGRFVV+PGWVEASALLYRRANEQDFA+
Sbjct: 1242 NWALSTGRFVVHPGWVEASALLYRRANEQDFAI 1274
>ref|XP_010656784.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
isoform X1 [Vitis vinifera]
Length = 1285
Score = 912 bits (2356), Expect = 0.0
Identities = 548/1122 (48%), Positives = 688/1122 (61%), Gaps = 65/1122 (5%)
Frame = -3
Query: 3802 SFEEVCSRLQKCFASLKQMFSQ-----GHGPVLDVLVQQAFMGIQTVYSAFSSGNLKKMD 3638
SF VCSRLQ SL+++F + P D L QQ I+ + F S N + +
Sbjct: 218 SFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQKE 277
Query: 3637 QNKELLLRLLIHIKNQYSVFLTPEQVKEIDVRVHAL----------ASESVSVGKTTGNV 3488
NK++ RLL ++ S + + +KE++V + L AS+ V+ + T +
Sbjct: 278 LNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSFLDTPAAQSSAEASDKVNDVQVTDGM 337
Query: 3487 N-----GSADPAERSGISEEKLRLDPRGSHVVRNNDGRACLSKLELPTNSRSRVDFSPLL 3323
N S + + R+ S +KL LD N+ A L ++SR R F PLL
Sbjct: 338 NRNILDSSVESSGRAFASAKKLSLDSISVESYNQNNPDALKPGL---SSSRGRFIFGPLL 394
Query: 3322 NLHADYDEDSLPSPTRDNAPPLPVLKPIGFGTGAAARTQLIAPKNV-DTENGTLHPYITD 3146
+LH D+DEDSLPSPT PV K ++L+ K +T++ +HPY TD
Sbjct: 395 DLHKDHDEDSLPSPTGKAPQCFPVNK-----------SELVTAKVAHETQDSIMHPYETD 443
Query: 3145 AFKAVSSYQQKYGKNSIIASNRLPSPTPSEDGNDGGDDIHGEVSSSSLAGNVRTVGPSIN 2966
A KAVS+YQQK+G S + ++LPSPTPSE+ D DI GEVSSSS +I+
Sbjct: 444 ALKAVSTYQQKFGLTSFLPIDKLPSPTPSEESGDTYGDISGEVSSSS----------TIS 493
Query: 2965 AANTNSSGSFQMPSVNSTGGFQMPSVNSTGGFQMLSVNSTGGFPMAPVNSLAAQMAPINS 2786
A T ++ + P V+S P ++S+ G + SL + ++S
Sbjct: 494 APITANAPALGHPIVSSA-----PQMDSS---------IVQGPTVGRNTSLVSSGPHLDS 539
Query: 2785 SAAQMAPV-KAVGQVGLEPNHVIKASAKSRDPRLRFMNSEVG-------------NAPQN 2648
S Q V + G V N +++ASAKSRDPRLR +S+ G N+P+
Sbjct: 540 SVVQGLVVPRNTGAVNSRFNSILRASAKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKV 599
Query: 2647 GIAAGLSNSRKHKTVDDHVPDDHNLKRQKNGSKSS---RDVQVTSGRGGWIEDSGSIASQ 2477
+ +SRK K+ ++ + D KRQ+NG S RD Q GGW+EDS ++ Q
Sbjct: 600 DPLGEIVSSRKQKSAEEPLLDGPVTKRQRNGLTSPATVRDAQTVVASGGWLEDSNTVIPQ 659
Query: 2476 TSNRVQSNKNMAVGNRNTGGEVGCDGRXXXXXXXXXXXXXSVPNMSTGAAPVVSLPSLLK 2297
NR Q +N + +V G +P ++T SL SLLK
Sbjct: 660 MMNRNQLIENTGTDPKKLESKVTVTGIGCDKPYVTVNGNEHLPVVATSTT--ASLQSLLK 717
Query: 2296 DIAVNPTMLMQLV-KMEQQRIAAEAQQKSAGPAVNGLSNAISSVSEAGQNPASKPQMP-- 2126
DIAVNP + M + K+EQQ+ A+ P N + + S A P++ Q P
Sbjct: 718 DIAVNPAVWMNIFNKVEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAG 777
Query: 2125 ----PQTTSM------------NDMGKIRMKPRDPRRILHXXXXXXXXXXXXEPIKTSGS 1994
PQT M ++ GK+RMKPRDPRRILH S
Sbjct: 778 ALQVPQTGPMLVTSCNNAQNPQDESGKVRMKPRDPRRILHA---------------NSFQ 822
Query: 1993 LSSDAQSSKDHSTVQEQGEQSQAIVLPSQPIVQPDISRQFTKNLQNLADLVSNSQASA-- 1820
S + S + + Q+Q +Q++ +PS + PDIS+QFTKNL+N+ADL+S SQAS+
Sbjct: 823 RSGSSGSEQFKTNAQKQEDQTETKSVPSHSVNPPDISQQFTKNLKNIADLMSASQASSMT 882
Query: 1819 ---PSIAGTQNISQPIASKISNDTTEPKTVPALSNQGGPMSSAS---QSANPWGDVDHLL 1658
P I +Q++ Q ++ T + L+ G SA+ QS N WGDV+HL
Sbjct: 883 PTFPQILSSQSV-QVNTDRMDVKATVSDSGDQLTANGSKPESAAGPPQSKNTWGDVEHLF 941
Query: 1657 DGYDDQQKAAIQKERARRIAEQNKMFAARKXXXXXXXXXXXLNSAKFVEVDPIHEEILRK 1478
DGYDDQQKAAIQ+ERARRI EQ KMF+ARK LNSAKFVEVDP+H+EILRK
Sbjct: 942 DGYDDQQKAAIQRERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRK 1001
Query: 1477 KEEQDKQRPERHLYRIPHMGMWTKLRPGIWNFLEKASQLYELHLYTMGNKLYATEMAKVL 1298
KEEQD+++ +RHL+R PHMGMWTKLRPGIWNFLEKAS+LYELHLYTMGNKLYATEMAKVL
Sbjct: 1002 KEEQDREKSQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVL 1061
Query: 1297 DPKGTLFSGRVISRGDDGDPFDGDERVPKSKDLDGVLGMESAVVIIDDSLRVWPHNKLNL 1118
DPKG LF+GRVIS+GDDGD DGDERVPKSKDL+GVLGMESAVVIIDDS+RVWPHNKLNL
Sbjct: 1062 DPKGVLFAGRVISKGDDGDVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNL 1121
Query: 1117 IVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHRNFFSHHSLNEI 938
IVVERYTYFP SRRQFGL GPSLLEIDHDERPEDGTLASSLAVIERIH++FFS+ +L+E+
Sbjct: 1122 IVVERYTYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEV 1181
Query: 937 DVRNILAAEQRKILAGCKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTNQIDEQVTHVV 758
DVRNILA+EQRKILAGC+IVFSRVFPVGEANPHLHPLWQTAE FGA CTNQIDEQVTHVV
Sbjct: 1182 DVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVV 1241
Query: 757 ANSRGTDKVNWALSTGRFVVYPGWVEASALLYRRANEQDFAV 632
ANS GTDKVNWALSTGRFVV+PGWVEASALLYRRANEQDFA+
Sbjct: 1242 ANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAI 1283
>ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
gi|568858958|ref|XP_006483010.1| PREDICTED: RNA
polymerase II C-terminal domain phosphatase-like 3-like
[Citrus sinensis] gi|557541056|gb|ESR52100.1|
hypothetical protein CICLE_v10030535mg [Citrus
clementina]
Length = 1234
Score = 911 bits (2354), Expect = 0.0
Identities = 544/1091 (49%), Positives = 689/1091 (63%), Gaps = 34/1091 (3%)
Frame = -3
Query: 3802 SFEEVCSRLQKCFASLKQMFSQGHGPVLDVLVQQAFMGIQTVYSAFSSGNLKKMDQNKEL 3623
SFE VCS+L+ SL+++ ++ + P D L+Q AF +Q+V+S F S N +QNKE+
Sbjct: 192 SFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEI 251
Query: 3622 LLRLLIHIKNQYSVFLTPEQVKEIDVRVHALASESVSVGKTTGNVNGSADPAERSGISEE 3443
L RLL IK+ + Q+KE++ + +L + + K ++G + + + ++E
Sbjct: 252 LSRLLSVIKSHEPPLFSSNQIKEMEAMLSSLVTRANDKEKDMLAMHG-VNGKDSNIVTEN 310
Query: 3442 KLRLDPRGSHVVRNNDGRACLSKLEL----PTNSRSRVDFSPLLNLHADYDEDSLPSPTR 3275
+ V D LE P RSR PLL+ H +D DSLPSPTR
Sbjct: 311 AVNDLNFKEKVPLPVDSLMQNKPLEASKPGPPGYRSRGVLLPLLDPHKVHDVDSLPSPTR 370
Query: 3274 DNAPPLPVLKPIGFGTGAAARTQLIAPKNVDTENGTLHPYITDAFKAVSSYQQKYGKNSI 3095
+ P +PV + + G G A + + E Y TDA +A SSYQQK+G+NS
Sbjct: 371 ETTPSVPVQRALVVGDGVVKSWAAAAKLSHNAEVHKTPHYETDALRAFSSYQQKFGRNSF 430
Query: 3094 IASNRLPSPTPSEDGNDGGDDIHGEVSSSSLAGNVRTVGPSINAANTNSSGSFQMPSVNS 2915
++ LPSPTPSE+ DG D GE+SS++ + V MP++
Sbjct: 431 FMNSELPSPTPSEESGDGDGDTGGEISSATAVDQPKPVN---------------MPTLG- 474
Query: 2914 TGGFQMPSVNSTGGFQMLSVNSTGGFPMAPVNSLAAQMAPINSSAAQMAPVKAVGQVGLE 2735
Q P V+S Q + ++ PM ++S+ A NS AP + ++
Sbjct: 475 ----QQP-VSS----QPMDISQ----PM-DISSVQALTTANNS-----APASSGYNPVVK 515
Query: 2734 PNHVIKASAKSRDPRLRFMNSE-----------VGNAPQNGIAAGLSNSRKHKTVDDHVP 2588
PN V+KA KSRDPRLRF +S + NAP+ + +SRK KTV++ V
Sbjct: 516 PNPVVKAPIKSRDPRLRFASSNALNLNHQPAPILHNAPKVEPVGRVMSSRKQKTVEEPVL 575
Query: 2587 DDHNLKRQKNGSKSS---RDVQVTSGRGGWIEDSGSIASQTSNRVQSNKNMAVGNRNTGG 2417
D LKRQ+NG ++S RD + G GGW+ED+ Q NR N+ V + +
Sbjct: 576 DGPALKRQRNGFENSGVVRDEKNIYGSGGWLEDTDMFEPQIMNR-----NLLVDSAESNS 630
Query: 2416 EVGCDGRXXXXXXXXXXXXXS--VPNMSTGAAPVVSLPSLLKDIAVNPTMLMQLVKM-EQ 2246
+G S P +T + VSLP+LLKDIAVNPTML+ ++KM +Q
Sbjct: 631 RKLDNGATSPITSGTPNVVVSGNEPAPATTPSTTVSLPALLKDIAVNPTMLLNILKMGQQ 690
Query: 2245 QRIAAEAQQKSAGPAVNGLSNAISS----VSEAGQNPASKPQMPPQTTSMNDMGKIRMKP 2078
Q++AA+AQQKS ++N + I S VS P+ P M+++GK+RMKP
Sbjct: 691 QKLAADAQQKSNDSSMNTMHPPIPSSIPPVSVTCSIPSGILSKP-----MDELGKVRMKP 745
Query: 2077 RDPRRILHXXXXXXXXXXXXEPIKTSGSLSSDAQSSKDHSTVQEQGEQSQAIVLPSQPIV 1898
RDPRR+LH E KT G + Q SK++ Q+Q +A + SQ ++
Sbjct: 746 RDPRRVLHGNALQRSGSLGPE-FKTDGPSAPCTQGSKENLNFQKQLGAPEAKPVLSQSVL 804
Query: 1897 QPDISRQFTKNLQNLADLVSNSQ--ASAPSIAGTQNISQPIASKISNDTT-------EPK 1745
QPDI++QFTKNL+++AD +S SQ S P ++ I QP K D + +
Sbjct: 805 QPDITQQFTKNLKHIADFMSVSQPLTSEPMVSQNSPI-QPGQIKSGADMKAVVTNHDDKQ 863
Query: 1744 TVPALSNQGGPMSSASQSANPWGDVDHLLDGYDDQQKAAIQKERARRIAEQNKMFAARKX 1565
T + GP+ + QSA WGDV+HL +GYDDQQKAAIQKER RR+ EQ KMF+ARK
Sbjct: 864 TGTGSGPEAGPVGAHPQSA--WGDVEHLFEGYDDQQKAAIQKERTRRLEEQKKMFSARKL 921
Query: 1564 XXXXXXXXXXLNSAKFVEVDPIHEEILRKKEEQDKQRPERHLYRIPHMGMWTKLRPGIWN 1385
LNSAKF EVDP+H+EILRKKEEQD+++P RHL+R PHMGMWTKLRPGIW
Sbjct: 922 CLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWT 981
Query: 1384 FLEKASQLYELHLYTMGNKLYATEMAKVLDPKGTLFSGRVISRGDDGDPFDGDERVPKSK 1205
FLE+AS+L+E+HLYTMGNKLYATEMAKVLDPKG LF+GRVISRGDDGDPFDGDERVPKSK
Sbjct: 982 FLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSK 1041
Query: 1204 DLDGVLGMESAVVIIDDSLRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDER 1025
DL+GVLGMESAVVIIDDS+RVWPHNKLNLIVVERYTYFP SRRQFGLLGPSLLEIDHDER
Sbjct: 1042 DLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDER 1101
Query: 1024 PEDGTLASSLAVIERIHRNFFSHHSLNEIDVRNILAAEQRKILAGCKIVFSRVFPVGEAN 845
EDGTLASSL VIER+H+ FFSH SL+++DVRNILAAEQRKILAGC+IVFSRVFPVGEAN
Sbjct: 1102 SEDGTLASSLGVIERLHKIFFSHQSLDDVDVRNILAAEQRKILAGCRIVFSRVFPVGEAN 1161
Query: 844 PHLHPLWQTAEQFGAECTNQIDEQVTHVVANSRGTDKVNWALSTGRFVVYPGWVEASALL 665
PHLHPLWQTAEQFGA CT ID+QVTHVVANS GTDKVNWALSTGRFVV+PGWVEASALL
Sbjct: 1162 PHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALL 1221
Query: 664 YRRANEQDFAV 632
YRRANEQDFA+
Sbjct: 1222 YRRANEQDFAI 1232
>gb|KDO83165.1| hypothetical protein CISIN_1g000897mg [Citrus sinensis]
Length = 1234
Score = 910 bits (2353), Expect = 0.0
Identities = 544/1091 (49%), Positives = 689/1091 (63%), Gaps = 34/1091 (3%)
Frame = -3
Query: 3802 SFEEVCSRLQKCFASLKQMFSQGHGPVLDVLVQQAFMGIQTVYSAFSSGNLKKMDQNKEL 3623
SFE VCS+L+ SL+++ ++ + P D L+Q AF +Q+V+S F S N +QNKE+
Sbjct: 192 SFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEI 251
Query: 3622 LLRLLIHIKNQYSVFLTPEQVKEIDVRVHALASESVSVGKTTGNVNGSADPAERSGISEE 3443
L RLL IK+ + Q+KE++ + +L + + K ++G + + + ++E
Sbjct: 252 LSRLLSLIKSHEPPLFSSNQIKEMEAMLSSLVTRANDKEKDMLAMHG-VNGKDSNIVTEN 310
Query: 3442 KLRLDPRGSHVVRNNDGRACLSKLEL----PTNSRSRVDFSPLLNLHADYDEDSLPSPTR 3275
+ V D LE P RSR PLL+ H +D DSLPSPTR
Sbjct: 311 AVNDLNFKEKVPLPVDSLMQNKPLEASKPGPPGYRSRGVLLPLLDPHKVHDVDSLPSPTR 370
Query: 3274 DNAPPLPVLKPIGFGTGAAARTQLIAPKNVDTENGTLHPYITDAFKAVSSYQQKYGKNSI 3095
+ P +PV + + G G A + + E Y TDA +A SSYQQK+G+NS
Sbjct: 371 ETTPSVPVQRALVVGDGMVKSWAAAAKLSHNAEVHKTPHYETDALRAFSSYQQKFGRNSF 430
Query: 3094 IASNRLPSPTPSEDGNDGGDDIHGEVSSSSLAGNVRTVGPSINAANTNSSGSFQMPSVNS 2915
++ LPSPTPSE+ DG D GE+SS++ + V MP++
Sbjct: 431 FMNSELPSPTPSEESGDGDGDTGGEISSATAVDQPKPVN---------------MPTLG- 474
Query: 2914 TGGFQMPSVNSTGGFQMLSVNSTGGFPMAPVNSLAAQMAPINSSAAQMAPVKAVGQVGLE 2735
Q P V+S Q + ++ PM ++S+ A NS AP + ++
Sbjct: 475 ----QQP-VSS----QPMDISQ----PM-DISSVQALTTANNS-----APASSGYNPVVK 515
Query: 2734 PNHVIKASAKSRDPRLRFMNSE-----------VGNAPQNGIAAGLSNSRKHKTVDDHVP 2588
PN V+KA KSRDPRLRF +S + NAP+ + +SRK KTV++ V
Sbjct: 516 PNPVVKAPIKSRDPRLRFASSNALNLNHQPAPILHNAPKVEPVGRVMSSRKQKTVEEPVL 575
Query: 2587 DDHNLKRQKNGSKSS---RDVQVTSGRGGWIEDSGSIASQTSNRVQSNKNMAVGNRNTGG 2417
D LKRQ+NG ++S RD + G GGW+ED+ Q NR N+ V + +
Sbjct: 576 DGPALKRQRNGFENSGVVRDEKNIYGSGGWLEDTDMFEPQIMNR-----NLLVDSAESNS 630
Query: 2416 EVGCDGRXXXXXXXXXXXXXS--VPNMSTGAAPVVSLPSLLKDIAVNPTMLMQLVKM-EQ 2246
+G S P +T + VSLP+LLKDIAVNPTML+ ++KM +Q
Sbjct: 631 RKLDNGATSPITSGTPNVVVSGNEPAPATTPSTTVSLPALLKDIAVNPTMLLNILKMGQQ 690
Query: 2245 QRIAAEAQQKSAGPAVNGLSNAISS----VSEAGQNPASKPQMPPQTTSMNDMGKIRMKP 2078
Q++AA+AQQKS ++N + I S VS P+ P M+++GK+RMKP
Sbjct: 691 QKLAADAQQKSNDSSMNTMHPPIPSSIPPVSVTCSIPSGILSKP-----MDELGKVRMKP 745
Query: 2077 RDPRRILHXXXXXXXXXXXXEPIKTSGSLSSDAQSSKDHSTVQEQGEQSQAIVLPSQPIV 1898
RDPRR+LH E KT G + Q SK++ Q+Q +A + SQ ++
Sbjct: 746 RDPRRVLHGNALQRSGSLGPE-FKTDGPSAPCTQGSKENLNFQKQLGAPEAKPVLSQSVL 804
Query: 1897 QPDISRQFTKNLQNLADLVSNSQ--ASAPSIAGTQNISQPIASKISNDTT-------EPK 1745
QPDI++QFTKNL+++AD +S SQ S P ++ I QP K D + +
Sbjct: 805 QPDITQQFTKNLKHIADFMSVSQPLTSEPMVSQNSPI-QPGQIKSGADMKAVVTNHDDKQ 863
Query: 1744 TVPALSNQGGPMSSASQSANPWGDVDHLLDGYDDQQKAAIQKERARRIAEQNKMFAARKX 1565
T + GP+ + QSA WGDV+HL +GYDDQQKAAIQKER RR+ EQ KMF+ARK
Sbjct: 864 TGTGSGPEAGPVGAHPQSA--WGDVEHLFEGYDDQQKAAIQKERTRRLEEQKKMFSARKL 921
Query: 1564 XXXXXXXXXXLNSAKFVEVDPIHEEILRKKEEQDKQRPERHLYRIPHMGMWTKLRPGIWN 1385
LNSAKF EVDP+H+EILRKKEEQD+++P RHL+R PHMGMWTKLRPGIW
Sbjct: 922 CLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWT 981
Query: 1384 FLEKASQLYELHLYTMGNKLYATEMAKVLDPKGTLFSGRVISRGDDGDPFDGDERVPKSK 1205
FLE+AS+L+E+HLYTMGNKLYATEMAKVLDPKG LF+GRVISRGDDGDPFDGDERVPKSK
Sbjct: 982 FLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSK 1041
Query: 1204 DLDGVLGMESAVVIIDDSLRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDER 1025
DL+GVLGMESAVVIIDDS+RVWPHNKLNLIVVERYTYFP SRRQFGLLGPSLLEIDHDER
Sbjct: 1042 DLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDER 1101
Query: 1024 PEDGTLASSLAVIERIHRNFFSHHSLNEIDVRNILAAEQRKILAGCKIVFSRVFPVGEAN 845
EDGTLASSL VIER+H+ FFSH SL+++DVRNILAAEQRKILAGC+IVFSRVFPVGEAN
Sbjct: 1102 SEDGTLASSLGVIERLHKIFFSHQSLDDVDVRNILAAEQRKILAGCRIVFSRVFPVGEAN 1161
Query: 844 PHLHPLWQTAEQFGAECTNQIDEQVTHVVANSRGTDKVNWALSTGRFVVYPGWVEASALL 665
PHLHPLWQTAEQFGA CT ID+QVTHVVANS GTDKVNWALSTGRFVV+PGWVEASALL
Sbjct: 1162 PHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALL 1221
Query: 664 YRRANEQDFAV 632
YRRANEQDFA+
Sbjct: 1222 YRRANEQDFAI 1232
>ref|XP_003577532.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
[Brachypodium distachyon]
Length = 1259
Score = 910 bits (2353), Expect = 0.0
Identities = 551/1136 (48%), Positives = 688/1136 (60%), Gaps = 56/1136 (4%)
Frame = -3
Query: 3871 EFDKRFGXXXXXXXXXXXXXXASSFEEVCSRLQKCFASLKQMFSQGHGPV--LDVLVQQA 3698
+FD+R G SFE C RL+ CF +LK +F + P+ LD LVQQ
Sbjct: 187 DFDQRVGSILEELEMVSIEEAEKSFEGACERLRTCFENLKPLFLESGSPMPMLDALVQQG 246
Query: 3697 FMGIQTVYSAFSSGNLKKMDQNKELLLRLLIHIKNQYSVFLTPEQVKEIDVRVHALA--- 3527
F+GI T+ + +S + K QNKE+LL+LL H++N+YS LTP+Q E+D RV LA
Sbjct: 247 FVGIDTITTVANSYAMPKRVQNKEMLLKLLFHLRNRYSDMLTPDQRVELDSRVRQLAFVD 306
Query: 3526 -SESVSVGKTTGNVNGSADPAERSGISEEKLRLDPRGSHVVRNNDGRACLSKLELPTNSR 3350
E+ + + N + + E+L + + N + L LE T +R
Sbjct: 307 GEENTDGPNASCSTNSTNVVVPTGQVPSERLPFESGAT----NPFSGSSLPWLETQTKNR 362
Query: 3349 SRVDFSPLLNLHADYDEDSLPSPTRDNAPPLPVLKPIGFGTGAAARTQLIAPKNVDTENG 3170
SPLL+LHAD+DE+SLPSPTRDNAP V KPIGFG + + + +
Sbjct: 363 M---VSPLLDLHADHDENSLPSPTRDNAPQFSVPKPIGFGAFPMGPDRSLTER-AEPSKK 418
Query: 3169 TLHPYITDAFKAVSSYQQKYGKNSIIASNRLPSPTPSEDGNDGGD---DIHGEVSSSSLA 2999
L+P + D+ VSSY+QKY + S A++ LPSPTPS DG+ D D+ GE+SS S
Sbjct: 419 NLYPSVNDSLD-VSSYKQKYSQKSNFANDDLPSPTPSGDGDKSEDKDGDMFGEISSFS-- 475
Query: 2998 GNVRTVGPSINAANTNSSGSFQMPSVNSTGGFQMPSVNSTGGFQMLSVNSTGGFPMAPVN 2819
SS +PSV+ + +V+S+ G S + G+
Sbjct: 476 ----------------SSNKTALPSVSQIPASRPSTVSSSNG----SFSGPPGY------ 509
Query: 2818 SLAAQMAPINSSAAQMAPVKAVGQVGLEPNHVIKASAKSRDPRLRFMNSEVGNA------ 2657
K + Q PN +K SAKSRDPRLR++N + G+A
Sbjct: 510 ------------------AKKIEQSVSGPNLALKPSAKSRDPRLRYLNRDPGDANRCMNF 551
Query: 2656 --PQNGIAAGLSNSRKHKTVDDHVPDDHNLKRQKNGSKSSRDVQVTSGRGGWIEDSGSIA 2483
P + L KHK V + D++ +KR + + RD+QV GR D +I+
Sbjct: 552 AEPNASLGGTLG---KHKAVGQPLMDENMVKRARGSIGNPRDLQVPPGR-----DGSNIS 603
Query: 2482 SQTSNRVQSNKNMAVGNRNTGG-EVGCDGRXXXXXXXXXXXXXSVPNM----------ST 2336
S+RVQSN+N + + TG + D + + T
Sbjct: 604 FYPSDRVQSNQNTRLDTKTTGNPNLRADSQLLSNVSSITNSSVTSTKTLNAGQPDSVPQT 663
Query: 2335 GAAPVVSLPSLLKDIAVNPTMLMQLVKMEQQ-RIAAEAQQ--KSAGPAVNGLSN------ 2183
AAP VSLP++LKDIAVNPT+LM ++MEQQ R A+E QQ + G +G+ N
Sbjct: 664 SAAPSVSLPAVLKDIAVNPTVLMHWIQMEQQKRSASEPQQTVNTLGGISSGMINNDTAGM 723
Query: 2182 -----AISSVSEAGQNPASKPQMPPQTT---SMNDMGKIRMKPRDPRRILHXXXXXXXXX 2027
+ ++A Q P+ +PQ P QT S D G IRMKPRDPRRILH
Sbjct: 724 VIPPGSALKTADAAQIPSIRPQCPTQTAPVISQTDAGVIRMKPRDPRRILHNNTSPKNDT 783
Query: 2026 XXXEPIKTSGSLSSDAQSSKDHSTVQEQ-GEQSQAIVLPSQPIVQPDISRQFTKNLQNLA 1850
E +++G + +Q SKD+ +EQ EQ Q LPSQP+ +I+R T + ++
Sbjct: 784 TNSEQARSNGIVLPVSQDSKDNMINREQQAEQLQTGALPSQPVSLSNIARPSTMSA-SMV 842
Query: 1849 DLVSNSQASAPSIAGTQNISQPIAS---KISNDTTEPKTVPALSNQGGPMSSASQSANPW 1679
D VSNSQ +A S+ Q S I +++ +P A + A+ AN W
Sbjct: 843 DPVSNSQLAASSLMAPQQTSGSINRADPRLAPGQNDPNADAATNASPATTLGAAPPANQW 902
Query: 1678 GDVDHLLDGYDDQQKAAIQKERARRIAEQNKMFAARKXXXXXXXXXXXLNSAKFVEVDPI 1499
GD+D LL GYDDQQKA IQKERARRI EQ KMF+ARK LNSAKF+EVDPI
Sbjct: 903 GDLDDLLSGYDDQQKALIQKERARRIMEQQKMFSARKLCLVLDLDHTLLNSAKFLEVDPI 962
Query: 1498 HEEILRKKEEQDKQRPERHLYRIPHMGMWTKLRPGIWNFLEKASQLYELHLYTMGNKLYA 1319
HEEILRKKEEQD++RPERHL+R+ HM MWTKLRPGIWNFLEKAS+LYELHLYTMGNKLYA
Sbjct: 963 HEEILRKKEEQDRERPERHLFRLHHMSMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYA 1022
Query: 1318 TEMAKVLDPKGTLFSGRVISRGDDG-------DPFDGDERVPKSKDLDGVLGMESAVVII 1160
TEMAKVLDP G LF GRVISRG DG D FD D+RVPKSKDLDGVLGMESAVVII
Sbjct: 1023 TEMAKVLDPTGALFEGRVISRGGDGTSRGGDGDSFDSDDRVPKSKDLDGVLGMESAVVII 1082
Query: 1159 DDSLRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIER 980
DDS+RVWPHNK N+IVVERYTYFP SRRQFGL GPSLLEID DERPEDGTLASSLAVI R
Sbjct: 1083 DDSVRVWPHNKNNMIVVERYTYFPCSRRQFGLPGPSLLEIDRDERPEDGTLASSLAVIGR 1142
Query: 979 IHRNFFSHHSLNEIDVRNILAAEQRKILAGCKIVFSRVFPVGEANPHLHPLWQTAEQFGA 800
IH+NFFSH +LN+ DVR+ILA+EQR+ILAGC+IVFSR+FPVGEANPHLHPLWQ+AEQFGA
Sbjct: 1143 IHQNFFSHPNLNDADVRSILASEQRRILAGCRIVFSRIFPVGEANPHLHPLWQSAEQFGA 1202
Query: 799 ECTNQIDEQVTHVVANSRGTDKVNWALSTGRFVVYPGWVEASALLYRRANEQDFAV 632
CTNQID++VTHVVANS GTDKVNWAL TGR+VV+PGWVEASALLYRRA+E DFAV
Sbjct: 1203 VCTNQIDDRVTHVVANSLGTDKVNWALQTGRYVVHPGWVEASALLYRRASEHDFAV 1258
>gb|KDO83166.1| hypothetical protein CISIN_1g000897mg [Citrus sinensis]
Length = 1218
Score = 908 bits (2347), Expect = 0.0
Identities = 541/1087 (49%), Positives = 686/1087 (63%), Gaps = 30/1087 (2%)
Frame = -3
Query: 3802 SFEEVCSRLQKCFASLKQMFSQGHGPVLDVLVQQAFMGIQTVYSAFSSGNLKKMDQNKEL 3623
SFE VCS+L+ SL+++ ++ + P D L+Q AF +Q+V+S F S N +QNKE+
Sbjct: 192 SFEGVCSKLEFTLESLRELVNENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEI 251
Query: 3622 LLRLLIHIKNQYSVFLTPEQVKEIDVRVHALASESVSVGKTTGNVNGSADPAERSGISEE 3443
L RLL IK+ + Q+KE++ + +L + + K ++G + + + ++E
Sbjct: 252 LSRLLSLIKSHEPPLFSSNQIKEMEAMLSSLVTRANDKEKDMLAMHG-VNGKDSNIVTEN 310
Query: 3442 KLRLDPRGSHVVRNNDGRACLSKLEL----PTNSRSRVDFSPLLNLHADYDEDSLPSPTR 3275
+ V D LE P RSR PLL+ H +D DSLPSPTR
Sbjct: 311 AVNDLNFKEKVPLPVDSLMQNKPLEASKPGPPGYRSRGVLLPLLDPHKVHDVDSLPSPTR 370
Query: 3274 DNAPPLPVLKPIGFGTGAAARTQLIAPKNVDTENGTLHPYITDAFKAVSSYQQKYGKNSI 3095
+ P +PV + + G G A + + E Y TDA +A SSYQQK+G+NS
Sbjct: 371 ETTPSVPVQRALVVGDGMVKSWAAAAKLSHNAEVHKTPHYETDALRAFSSYQQKFGRNSF 430
Query: 3094 IASNRLPSPTPSEDGNDGGDDIHGEVSSSSLAGNVRTVGPSINAANTNSSGSFQMPSVNS 2915
++ LPSPTPSE+ DG D GE+SS++ + V MP++
Sbjct: 431 FMNSELPSPTPSEESGDGDGDTGGEISSATAVDQPKPVN---------------MPTLG- 474
Query: 2914 TGGFQMPSVNSTGGFQMLSVNSTGGFPMAPVNSLAAQMAPINSSAAQMAPVKAVGQVGLE 2735
Q P V+S Q + ++ PM ++S+ A NS AP + ++
Sbjct: 475 ----QQP-VSS----QPMDISQ----PM-DISSVQALTTANNS-----APASSGYNPVVK 515
Query: 2734 PNHVIKASAKSRDPRLRFMNSE-----------VGNAPQNGIAAGLSNSRKHKTVDDHVP 2588
PN V+KA KSRDPRLRF +S + NAP+ + +SRK KTV++ V
Sbjct: 516 PNPVVKAPIKSRDPRLRFASSNALNLNHQPAPILHNAPKVEPVGRVMSSRKQKTVEEPVL 575
Query: 2587 DDHNLKRQKNGSKSS---RDVQVTSGRGGWIEDSGSIASQTSNRVQSNKNMAVGNRNTGG 2417
D LKRQ+NG ++S RD + G GGW+ED+ Q NR N+ V + +
Sbjct: 576 DGPALKRQRNGFENSGVVRDEKNIYGSGGWLEDTDMFEPQIMNR-----NLLVDSAESNS 630
Query: 2416 EVGCDGRXXXXXXXXXXXXXS--VPNMSTGAAPVVSLPSLLKDIAVNPTMLMQLVKM-EQ 2246
+G S P +T + VSLP+LLKDIAVNPTML+ ++KM +Q
Sbjct: 631 RKLDNGATSPITSGTPNVVVSGNEPAPATTPSTTVSLPALLKDIAVNPTMLLNILKMGQQ 690
Query: 2245 QRIAAEAQQKSAGPAVNGLSNAISSVSEAGQNPASKPQMPPQTTSMNDMGKIRMKPRDPR 2066
Q++AA+AQQKS ++N + I S +PP +++GK+RMKPRDPR
Sbjct: 691 QKLAADAQQKSNDSSMNTMHPPIPS------------SIPP-----DELGKVRMKPRDPR 733
Query: 2065 RILHXXXXXXXXXXXXEPIKTSGSLSSDAQSSKDHSTVQEQGEQSQAIVLPSQPIVQPDI 1886
R+LH E KT G + Q SK++ Q+Q +A + SQ ++QPDI
Sbjct: 734 RVLHGNALQRSGSLGPE-FKTDGPSAPCTQGSKENLNFQKQLGAPEAKPVLSQSVLQPDI 792
Query: 1885 SRQFTKNLQNLADLVSNSQ--ASAPSIAGTQNISQPIASKISNDTT-------EPKTVPA 1733
++QFTKNL+++AD +S SQ S P ++ I QP K D + +T
Sbjct: 793 TQQFTKNLKHIADFMSVSQPLTSEPMVSQNSPI-QPGQIKSGADMKAVVTNHDDKQTGTG 851
Query: 1732 LSNQGGPMSSASQSANPWGDVDHLLDGYDDQQKAAIQKERARRIAEQNKMFAARKXXXXX 1553
+ GP+ + QSA WGDV+HL +GYDDQQKAAIQKER RR+ EQ KMF+ARK
Sbjct: 852 SGPEAGPVGAHPQSA--WGDVEHLFEGYDDQQKAAIQKERTRRLEEQKKMFSARKLCLVL 909
Query: 1552 XXXXXXLNSAKFVEVDPIHEEILRKKEEQDKQRPERHLYRIPHMGMWTKLRPGIWNFLEK 1373
LNSAKF EVDP+H+EILRKKEEQD+++P RHL+R PHMGMWTKLRPGIW FLE+
Sbjct: 910 DLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLER 969
Query: 1372 ASQLYELHLYTMGNKLYATEMAKVLDPKGTLFSGRVISRGDDGDPFDGDERVPKSKDLDG 1193
AS+L+E+HLYTMGNKLYATEMAKVLDPKG LF+GRVISRGDDGDPFDGDERVPKSKDL+G
Sbjct: 970 ASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEG 1029
Query: 1192 VLGMESAVVIIDDSLRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDG 1013
VLGMESAVVIIDDS+RVWPHNKLNLIVVERYTYFP SRRQFGLLGPSLLEIDHDER EDG
Sbjct: 1030 VLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERSEDG 1089
Query: 1012 TLASSLAVIERIHRNFFSHHSLNEIDVRNILAAEQRKILAGCKIVFSRVFPVGEANPHLH 833
TLASSL VIER+H+ FFSH SL+++DVRNILAAEQRKILAGC+IVFSRVFPVGEANPHLH
Sbjct: 1090 TLASSLGVIERLHKIFFSHQSLDDVDVRNILAAEQRKILAGCRIVFSRVFPVGEANPHLH 1149
Query: 832 PLWQTAEQFGAECTNQIDEQVTHVVANSRGTDKVNWALSTGRFVVYPGWVEASALLYRRA 653
PLWQTAEQFGA CT ID+QVTHVVANS GTDKVNWALSTGRFVV+PGWVEASALLYRRA
Sbjct: 1150 PLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRA 1209
Query: 652 NEQDFAV 632
NEQDFA+
Sbjct: 1210 NEQDFAI 1216
>ref|XP_002304714.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
gi|550343307|gb|EEE79693.2| hypothetical protein
POPTR_0003s16280g [Populus trichocarpa]
Length = 1030
Score = 908 bits (2346), Expect = 0.0
Identities = 545/1072 (50%), Positives = 662/1072 (61%), Gaps = 64/1072 (5%)
Frame = -3
Query: 3655 NLKKMDQNKELLLRLLIHIKNQYSVFLTPEQVKEIDVRVHALASESVSVGKTTGN----- 3491
N K +QNK + +R L + + F +PE KEI++ V +L S + G
Sbjct: 2 NQKLKEQNKGVFMRFLSLVNSHDPSFFSPEHTKEIELMVSSLDSHDILSSSRAGEERETQ 61
Query: 3490 VNGSADPAERSGISEEK-------LRLDPRGSHVVRNNDGRACLSKLELPTNSRSRVDFS 3332
V+G + + +S+ RL V N + + +SR
Sbjct: 62 VSGKVNERDNDSLSKTAGYDLTTMNRLPSAAESFVHNKPNFSIEPPKPGVPSFKSRGVLL 121
Query: 3331 PLLNLHADYDEDSLPSPTRDNAPPLPVLKPIGFGTGAAARTQLIAPKNVD-TENGTLHPY 3155
PLL+L +DEDSLPSPTR+ AP PV + + G G + + L PK TE +HPY
Sbjct: 122 PLLDLKKFHDEDSLPSPTRETAPSFPVQRLLPIGDGMIS-SGLPVPKVASITEEPRVHPY 180
Query: 3154 ITDAFKAVSSYQQKYGKNSIIASNRLPSPTPSEDGNDGGDDIHGEVSSSSLAGNVRTVGP 2975
TDA KAVSSYQ+K+ NS +N LPSPTPSE+ +G D GEVSSSS N RTV P
Sbjct: 181 ETDALKAVSSYQKKFNLNSFF-TNELPSPTPSEESGNGDGDTAGEVSSSSTV-NYRTVNP 238
Query: 2974 SINAANTNSSGSFQMPSVNSTGGFQMPSVNSTGGFQMLSVNSTGGFPMAPVNSLAAQMAP 2795
++ + S P P P L
Sbjct: 239 PVSDRKSASPSPSPPPPPPP--------------------------PPPPPPHLN----- 267
Query: 2794 INSSAAQMAPVKAVGQVGLEPNHVIKASAKSRDPRLRFMNSE-------------VGNAP 2654
NSS + P + V + +KASAKSRDPRLR++N++ V N P
Sbjct: 268 -NSSIRVVIPTRNSAPVSSGTSSTVKASAKSRDPRLRYVNTDASALDQNQRTLLMVNNPP 326
Query: 2653 QNGIAAGLSNSRKHKTVDDHVPDDHNLKRQKNGSKS---SRDVQVTSGRGGWIEDSGSIA 2483
+ + ++ SRK K +++ V D +LKRQ+N + RD++ +G GGW+ED+
Sbjct: 327 RAEPSGAIAGSRKQK-IEEDVLDGTSLKRQRNSFDNFGVVRDIRSMTGTGGWLEDTDMAE 385
Query: 2482 SQTSNRVQSNKNMAVGNRNTGGEVGCDGRXXXXXXXXXXXXXSVPNMSTGA------APV 2321
QT N+ Q +N G R G V C VP M APV
Sbjct: 386 PQTVNKNQWAENAEPGQRINNGVV-CPSTGSVMSSVSCSGNVQVPVMGINTIAGSEQAPV 444
Query: 2320 -----VSLPSLLKDIAVNPTMLMQLVKM-EQQRIAAEAQQKSAGPA--------VNGLSN 2183
SLP LLKDI VNPTML+ ++KM +QQR+A + QQK A PA N +
Sbjct: 445 TSTTTASLPDLLKDITVNPTMLINILKMGQQQRLALDGQQKLADPAKSTSHPPSSNTVLG 504
Query: 2182 AISSVSEAGQNP-------ASKPQMPPQTTSMNDMGKIRMKPRDPRRILHXXXXXXXXXX 2024
AI V+ P A K Q P Q + ++ GKIRMKPRDPRR+LH
Sbjct: 505 AIPEVNAVSSLPSGILPRSAGKAQGPSQIATTDESGKIRMKPRDPRRVLHNNALQRAGSL 564
Query: 2023 XXEPIKTSGSLSSDAQSSKDHSTVQEQGEQSQAIVLPSQPIVQPDISRQFTKNLQNLADL 1844
E KT+ +L+S Q +KD+ +Q+Q ++ +P+V PDIS FTK+L+N+AD+
Sbjct: 565 GSEQFKTT-TLTSTTQGTKDNQNLQKQEGLAEL-----KPVVPPDISSPFTKSLKNIADI 618
Query: 1843 VSNSQASAPSIAGTQNI-SQPIASKISNDTTEPKTVPALSNQG-GPMSS------ASQSA 1688
VS SQ +QN+ SQP+ +I +D + KT + S+Q GP SS +S S
Sbjct: 619 VSVSQTCTTPPFVSQNVASQPV--QIKSDRVDGKTGISNSDQKMGPASSPEVVAASSLSQ 676
Query: 1687 NPWGDVDHLLDGYDDQQKAAIQKERARRIAEQNKMFAARKXXXXXXXXXXXLNSAKFVEV 1508
N W DV+HL +GYDDQQKAAIQ+ERARRI EQ K+FAARK LNSAKFVEV
Sbjct: 677 NTWEDVEHLFEGYDDQQKAAIQRERARRIEEQKKLFAARKLCLVLDLDHTLLNSAKFVEV 736
Query: 1507 DPIHEEILRKKEEQDKQRPERHLYRIPHMGMWTKLRPGIWNFLEKASQLYELHLYTMGNK 1328
DP+H+EILRKKEEQD+++P RHL+R PHMGMWTKLRPGIWNFLEKAS+LYELHLYTMGNK
Sbjct: 737 DPVHDEILRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK 796
Query: 1327 LYATEMAKVLDPKGTLFSGRVISRGDDGDPFDGDERVPKSKDLDGVLGMESAVVIIDDSL 1148
LYATEMAKVLDPKG LF+GRV+SRGDDGD DGDERVPKSKDL+GVLGMES VVIIDDSL
Sbjct: 797 LYATEMAKVLDPKGVLFAGRVVSRGDDGDLLDGDERVPKSKDLEGVLGMESGVVIIDDSL 856
Query: 1147 RVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHRN 968
RVWPHNKLNLIVVERY YFP SRRQFGL GPSLLEIDHDERPEDGTLA SLAVIERIH+N
Sbjct: 857 RVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLACSLAVIERIHQN 916
Query: 967 FFSHHSLNEIDVRNILAAEQRKILAGCKIVFSRVFPVGEANPHLHPLWQTAEQFGAECTN 788
FF+HHSL+E DVRNILA+EQRKILAGC+IVFSRVFPVGE NPHLHPLWQ+AEQFGA CTN
Sbjct: 917 FFTHHSLDEADVRNILASEQRKILAGCRIVFSRVFPVGEVNPHLHPLWQSAEQFGAVCTN 976
Query: 787 QIDEQVTHVVANSRGTDKVNWALSTGRFVVYPGWVEASALLYRRANEQDFAV 632
QIDEQVTHVVANS GTDKVNWALSTGRFVV+PGWVEASALLYRRANEQDFA+
Sbjct: 977 QIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAI 1028