BLASTX nr result

ID: Anemarrhena21_contig00010708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00010708
         (207 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010910041.1| PREDICTED: nuclear pore complex protein NUP9...    62   1e-07
ref|XP_008800302.1| PREDICTED: nuclear pore complex protein Nup9...    61   3e-07
ref|XP_008800301.1| PREDICTED: nuclear pore complex protein Nup9...    61   3e-07
ref|XP_008800300.1| PREDICTED: nuclear pore complex protein Nup9...    61   3e-07
ref|XP_009381267.1| PREDICTED: uncharacterized protein DDB_G0274...    60   7e-07
ref|XP_009381251.1| PREDICTED: uncharacterized protein DDB_G0274...    60   7e-07
ref|XP_010914822.1| PREDICTED: nuclear pore complex protein NUP9...    59   2e-06
ref|XP_010914821.1| PREDICTED: nuclear pore complex protein NUP9...    59   2e-06
ref|XP_009393138.1| PREDICTED: nuclear pore complex protein Nup9...    58   3e-06
ref|XP_009393137.1| PREDICTED: nuclear pore complex protein Nup9...    58   3e-06
ref|XP_009393136.1| PREDICTED: nuclear pore complex protein Nup9...    58   3e-06

>ref|XP_010910041.1| PREDICTED: nuclear pore complex protein NUP98A-like [Elaeis
           guineensis]
          Length = 1053

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 32/53 (60%), Positives = 39/53 (73%), Gaps = 7/53 (13%)
 Frame = +2

Query: 11  SMTSSFGSQFRVGQTNSAGTNPFAQKPFG-------PSGSSLYGRTATGVFGQ 148
           S TS FGSQ  +GQT+SA +NPFAQKPFG        +GSS++G T+TGVFGQ
Sbjct: 49  SSTSPFGSQSVIGQTSSASSNPFAQKPFGSPNPFGSATGSSVFGGTSTGVFGQ 101


>ref|XP_008800302.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X3
           [Phoenix dactylifera]
          Length = 1006

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 7/53 (13%)
 Frame = +2

Query: 11  SMTSSFGSQFRVGQTNSAGTNPFAQKPFG-------PSGSSLYGRTATGVFGQ 148
           S TS FGSQ   GQT+SA +NPFAQKPFG        +GSS++G T+TGVFGQ
Sbjct: 11  SSTSPFGSQSVFGQTSSASSNPFAQKPFGSPKPFGYATGSSVFGGTSTGVFGQ 63


>ref|XP_008800301.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X2
           [Phoenix dactylifera]
          Length = 1009

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 7/53 (13%)
 Frame = +2

Query: 11  SMTSSFGSQFRVGQTNSAGTNPFAQKPFG-------PSGSSLYGRTATGVFGQ 148
           S TS FGSQ   GQT+SA +NPFAQKPFG        +GSS++G T+TGVFGQ
Sbjct: 11  SSTSPFGSQSVFGQTSSASSNPFAQKPFGSPKPFGYATGSSVFGGTSTGVFGQ 63


>ref|XP_008800300.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
           [Phoenix dactylifera]
          Length = 1010

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 7/53 (13%)
 Frame = +2

Query: 11  SMTSSFGSQFRVGQTNSAGTNPFAQKPFG-------PSGSSLYGRTATGVFGQ 148
           S TS FGSQ   GQT+SA +NPFAQKPFG        +GSS++G T+TGVFGQ
Sbjct: 11  SSTSPFGSQSVFGQTSSASSNPFAQKPFGSPKPFGYATGSSVFGGTSTGVFGQ 63


>ref|XP_009381267.1| PREDICTED: uncharacterized protein DDB_G0274915-like isoform X2
           [Musa acuminata subsp. malaccensis]
          Length = 1024

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 31/53 (58%), Positives = 37/53 (69%), Gaps = 7/53 (13%)
 Frame = +2

Query: 11  SMTSSFGSQFRVGQTNSAGTNPFAQKPFGPS-------GSSLYGRTATGVFGQ 148
           S +SSFGSQ   GQT+S+G NPFA KPFG S       G S++G T+TGVFGQ
Sbjct: 11  SSSSSFGSQSVFGQTSSSGNNPFAPKPFGSSNPFGSQTGGSVFGSTSTGVFGQ 63


>ref|XP_009381251.1| PREDICTED: uncharacterized protein DDB_G0274915-like isoform X1
           [Musa acuminata subsp. malaccensis]
           gi|695002651|ref|XP_009381259.1| PREDICTED:
           uncharacterized protein DDB_G0274915-like isoform X1
           [Musa acuminata subsp. malaccensis]
          Length = 1028

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 31/53 (58%), Positives = 37/53 (69%), Gaps = 7/53 (13%)
 Frame = +2

Query: 11  SMTSSFGSQFRVGQTNSAGTNPFAQKPFGPS-------GSSLYGRTATGVFGQ 148
           S +SSFGSQ   GQT+S+G NPFA KPFG S       G S++G T+TGVFGQ
Sbjct: 11  SSSSSFGSQSVFGQTSSSGNNPFAPKPFGSSNPFGSQTGGSVFGSTSTGVFGQ 63


>ref|XP_010914822.1| PREDICTED: nuclear pore complex protein NUP98A isoform X2 [Elaeis
           guineensis]
          Length = 1027

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
 Frame = +2

Query: 11  SMTSSFGSQFRVGQTNSAGTNPFAQKPFG-------PSGSSLYGRTATGVFGQAXXXXXX 169
           S +S FGSQ   GQT+S+ TNPFA KPFG        +GSS++G T+TGVFGQ+      
Sbjct: 11  SSSSPFGSQSVFGQTSSSSTNPFAPKPFGSPNPFGLQTGSSIFGGTSTGVFGQSSSPLSS 70

Query: 170 XXXXXXLPTAAF 205
                   T+AF
Sbjct: 71  TPTFGASSTSAF 82


>ref|XP_010914821.1| PREDICTED: nuclear pore complex protein NUP98A isoform X1 [Elaeis
           guineensis]
          Length = 1028

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
 Frame = +2

Query: 11  SMTSSFGSQFRVGQTNSAGTNPFAQKPFG-------PSGSSLYGRTATGVFGQAXXXXXX 169
           S +S FGSQ   GQT+S+ TNPFA KPFG        +GSS++G T+TGVFGQ+      
Sbjct: 11  SSSSPFGSQSVFGQTSSSSTNPFAPKPFGSPNPFGLQTGSSIFGGTSTGVFGQSSSPLSS 70

Query: 170 XXXXXXLPTAAF 205
                   T+AF
Sbjct: 71  TPTFGASSTSAF 82


>ref|XP_009393138.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X3
           [Musa acuminata subsp. malaccensis]
          Length = 1028

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 7/51 (13%)
 Frame = +2

Query: 17  TSSFGSQFRVGQTNSAGTNPFAQKPFG-------PSGSSLYGRTATGVFGQ 148
           +S FGSQ   GQT+++GTNPF+ KPFG        +GSS++G T+TGVFGQ
Sbjct: 12  SSPFGSQSMFGQTSTSGTNPFSPKPFGSPNPFGSQTGSSIFGSTSTGVFGQ 62


>ref|XP_009393137.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X2
           [Musa acuminata subsp. malaccensis]
          Length = 1032

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 7/51 (13%)
 Frame = +2

Query: 17  TSSFGSQFRVGQTNSAGTNPFAQKPFG-------PSGSSLYGRTATGVFGQ 148
           +S FGSQ   GQT+++GTNPF+ KPFG        +GSS++G T+TGVFGQ
Sbjct: 12  SSPFGSQSMFGQTSTSGTNPFSPKPFGSPNPFGSQTGSSIFGSTSTGVFGQ 62


>ref|XP_009393136.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
           [Musa acuminata subsp. malaccensis]
          Length = 1033

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 7/51 (13%)
 Frame = +2

Query: 17  TSSFGSQFRVGQTNSAGTNPFAQKPFG-------PSGSSLYGRTATGVFGQ 148
           +S FGSQ   GQT+++GTNPF+ KPFG        +GSS++G T+TGVFGQ
Sbjct: 12  SSPFGSQSMFGQTSTSGTNPFSPKPFGSPNPFGSQTGSSIFGSTSTGVFGQ 62


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