BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00009519
         (5583 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I sub...  2203   0.0  
ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I sub...  2193   0.0  
gb|AIO05696.1| putative RNA polymerase AI large subunit, partial...  2179   0.0  
ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I sub...  2093   0.0  
ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I sub...  2082   0.0  
ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I sub...  1810   0.0  
ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I sub...  1735   0.0  
emb|CBI29879.3| unnamed protein product [Vitis vinifera]             1729   0.0  
ref|XP_010238655.1| PREDICTED: DNA-directed RNA polymerase I sub...  1667   0.0  
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...  1624   0.0  
ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I sub...  1589   0.0  
gb|EMS52925.1| DNA-directed RNA polymerase I subunit rpa1 [Triti...  1588   0.0  
emb|CDP10074.1| unnamed protein product [Coffea canephora]           1578   0.0  
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...  1572   0.0  
ref|XP_009790932.1| PREDICTED: DNA-directed RNA polymerase I sub...  1571   0.0  
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...  1569   0.0  
ref|XP_010036455.1| PREDICTED: DNA-directed RNA polymerase I sub...  1556   0.0  
ref|XP_010036456.1| PREDICTED: DNA-directed RNA polymerase I sub...  1555   0.0  
ref|XP_011075204.1| PREDICTED: DNA-directed RNA polymerase I sub...  1551   0.0  
ref|XP_010546965.1| PREDICTED: DNA-directed RNA polymerase I sub...  1546   0.0  

>ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Phoenix
            dactylifera]
          Length = 1665

 Score = 2203 bits (5708), Expect = 0.0
 Identities = 1131/1670 (67%), Positives = 1306/1670 (78%), Gaps = 24/1670 (1%)
 Frame = -3

Query: 5515 ANEAPSEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINETDS 5336
            + EA SE+VD+++FSFY+AE+I+KISVKKIT PDLLD K   VP+GLYDPALGPIN+TDS
Sbjct: 6    SEEAASEVVDSVRFSFYTAEEIRKISVKKITKPDLLDSKNASVPDGLYDPALGPINDTDS 65

Query: 5335 CKTCGLLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQYVAK 5156
            CK+CG L++RCPGHCGHIDL +PLYNPLLF  L+NLLQITCF C +FR  E+KV++Y  +
Sbjct: 66   CKSCGQLSFRCPGHCGHIDLARPLYNPLLFRNLQNLLQITCFFCRKFRLNEEKVQRYAEQ 125

Query: 5155 LEHIARGDVVAAKKTETSLLAEAFSEDEDNGKDIKEKNAGVASCELETDSKDAKQK-TWT 4979
            L  IA+GD+V AK  E     E +  +E+     + K+A + + E  +   + KQ+ TWT
Sbjct: 126  LCLIAKGDIVGAKTLEAHSWGEFYFPNEE-----ETKSAAIHTSESLSKITNLKQQQTWT 180

Query: 4978 SLQYAEAVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLSKTTKDSDIRADFIRGSDVG 4799
            SLQ++EA+S+LS  ++ + KKCANC R NP I+SPTFGWL+K  + SDIR++FI  SD+G
Sbjct: 181  SLQHSEALSILSKFLREKSKKCANCSRKNPTITSPTFGWLNKAIQASDIRSNFIMESDLG 240

Query: 4798 LSSTAEDKS--ADANGDGTSQSEEELLAPTNVS----EQLRNLPPDFFKRLYSSAGQKHL 4637
            LSST +  +  + + GD  SQ +EE  + T V     +Q R+LPP+  K++ SS  +KHL
Sbjct: 241  LSSTEDQNTEGSQSRGDSASQLDEEPSSITKVQRKTKKQSRDLPPEIAKQMLSSGQKKHL 300

Query: 4636 LPSEAQLILEGLWRNEAQLCSLICDIQQNNLNVTGKNKAYAMFFLKVLLVPPSKFRPCAF 4457
            LPSE + IL+ LW NEA++C+LICD+Q+ +LN  G++K YAMFFLK LLVPPSKFRP A 
Sbjct: 301  LPSEVEAILKDLWNNEAKICALICDVQRRSLNRLGRDKGYAMFFLKTLLVPPSKFRPPAG 360

Query: 4456 GG-RQVVEHPQNLLLSKVQESNIALQELITSDPDHPNTIRRWMDLQRSVTVLFDSSKGLA 4280
             G R V+EHPQN+LLSKVQESNIAL+ +I + PDHP+ +R WMDLQR+V +LFDSSKG  
Sbjct: 361  SGTRGVLEHPQNVLLSKVQESNIALRNVIANGPDHPDIVRSWMDLQRNVNLLFDSSKGWV 420

Query: 4279 KSEKDTNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALKLTY 4100
            K+E++ NGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAL+LTY
Sbjct: 421  KTEREVNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTY 480

Query: 4099 PERVTPWNVNKLRHAVINGADIHPGASHYMDKDRLYKLQVSRSMRNAIGRKLPTSRGVTS 3920
            PERVTPWNVNKLRHA+INGADIHPGA+HY D +R+YKLQ+ R+MRN+I RKLPTSRGV  
Sbjct: 481  PERVTPWNVNKLRHAIINGADIHPGATHYKDNERMYKLQLGRNMRNSISRKLPTSRGVLV 540

Query: 3919 QSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGEKTLRMHYANCS 3740
            Q GKGPE +FEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL GEKTLRMHYANCS
Sbjct: 541  QQGKGPESEFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYANCS 600

Query: 3739 TYNADFDGDEMNVHFPQDEISRAEAMNIVNANKQYIVPTSGDPIRGLIQDHIVSAVLLSK 3560
            TYNADFDGDEMNVH PQDEISRAEA+NIVNANKQY+VPTSGDPIRGLIQDHIVSAVLL+K
Sbjct: 601  TYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYVVPTSGDPIRGLIQDHIVSAVLLTK 660

Query: 3559 QDTFLTREQYHQLLYASCLPPAVNSLQPGIFGQKVSVLNSDDEIQPIPPAIWKPKPLWTG 3380
             DTFLTREQYHQLLYASC+PP  +S QPG FG+ V  L+SDDEIQP+ PAIWKP PLWTG
Sbjct: 661  LDTFLTREQYHQLLYASCMPPIASS-QPGRFGRNVCTLSSDDEIQPLLPAIWKPIPLWTG 719

Query: 3379 KQVITAILCHITRGRSPFTIEKDGRIPKEYFAKDSKEFSMHIYKNEFIHGIIDKAQFGKY 3200
            KQVITAIL HITRGR PFT+E  GRIPKEY  K+  E  + IY N+ IHG++DKAQFGKY
Sbjct: 720  KQVITAILNHITRGRPPFTVENKGRIPKEYLGKNHNELKLLIYNNDLIHGMVDKAQFGKY 779

Query: 3199 GLVHIVHELYGADTAGSLLSIFSRLFTTFLQMHAFTCGVDDLLLLQEADMGREVMLEKSE 3020
            GLVH +HELYGADTAG LLS+FSRLFT FLQMH FTCGVDDLLL Q +DM R+ +LEKSE
Sbjct: 780  GLVHTIHELYGADTAGILLSVFSRLFTLFLQMHGFTCGVDDLLLDQSSDMERKRILEKSE 839

Query: 3019 AQSGDVHFRFTGTKRGDIDPLDLCREIEKVVRSNGESATARLDRMMSNSLNVLTSEVNKA 2840
            A S DVH RFT  K GD DP+ L REIEKV+  N ESAT  LDRMMS+S+NVLTSEVN+ 
Sbjct: 840  ALSEDVHIRFTAFKDGDRDPMKLQREIEKVLCRNRESATTLLDRMMSSSMNVLTSEVNQT 899

Query: 2839 LFPAGLQKPFPRNCLSLMTTTGAKGGLVNLTQISSLLGQQELEGKRVPRMISGKTLPSFP 2660
            LFP+GLQKPF RNCLSLMTTTGAKGGLVN+TQISSLLGQQELEGKRVPRM+SGKTLP FP
Sbjct: 900  LFPSGLQKPFLRNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRVPRMVSGKTLPCFP 959

Query: 2659 PWDTSCRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLIKNLESL 2480
            PWD SCRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTA+KTSRSGYLQRCL+KNLE L
Sbjct: 960  PWDVSCRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLVKNLECL 1019

Query: 2479 KVCYDYTVRDADGSVVQFAYGEDGVDVLKTSYITEVQVLSNNQRVVLESLSCQLEDAHLS 2300
            KV YD+TVRDADGSV+QF YGEDGVDVLKTS+I+E+  L+ NQ VVL+ LS QLEDAHLS
Sbjct: 1020 KVSYDHTVRDADGSVIQFMYGEDGVDVLKTSFISELGALAANQTVVLDRLSSQLEDAHLS 1079

Query: 2299 KSNSFIKELPDSLRERATNLSRQLSKS--GSRHQIXXXXXXXXXXXXXXXXLAEPGEPVG 2126
            KSN +IKELP  LRE AT  +R LSK+  GS HQI                LAEPGEPVG
Sbjct: 1080 KSNGYIKELPYLLRENATTFAR-LSKNHQGSLHQIKRKDLMKLMKLKYLSSLAEPGEPVG 1138

Query: 2125 VIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMSAKEAIRTPIMTCPLLDGM 1946
            VIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILM+A   IRTP+MTCPL DG 
Sbjct: 1139 VIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVDIRTPVMTCPLHDGR 1198

Query: 1945 TKEDGERFAAKLRRICVADIVESMEVSTVPFYIHKRRVSTLYKLKMKLYPCGLYPPHIDI 1766
            T+ED ER A+KLRR+C+ADIVESMEV +VPF IH   VST+YKLKM LYP  LYPPH  +
Sbjct: 1199 TREDAERLASKLRRVCLADIVESMEVCSVPFCIHGNEVSTIYKLKMNLYPPELYPPHSSL 1258

Query: 1765 SLEDCRAILRTTFISAMEDAIKKHLDLISRISGIEVVSGKGD-NSXXXXXXXXXGSKSXX 1589
            +LEDC   LRT FI AMEDAI KHLD+I +IS I  V+ K + N          GSKS  
Sbjct: 1259 TLEDCMITLRTDFIGAMEDAIAKHLDMICKISDISSVTAKEESNLAEGTDEDEHGSKS-- 1316

Query: 1588 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEKRKKQTCDELEYEDGMEKQTSVSVDEHD 1409
                                          AEKRKK+  DE+EYEDG+EK++S   DEHD
Sbjct: 1317 --THGEDKDNSSGFDGVDDDDGINEDEGMDAEKRKKRASDEMEYEDGIEKESSAKADEHD 1374

Query: 1408 GVSSSGFESEVDQAEAEEDYEIGGD------DPVTVAEEKMPEDDLGVVADEESPDN--- 1256
            G + SGFESE+DQ EA+EDY +GGD      DP    EE++PE            D    
Sbjct: 1375 GETQSGFESEIDQVEADEDYTVGGDHSMEVEDPSLEVEEEIPESPSKAEPTPTLEDGKKQ 1434

Query: 1255 ----PVPXXXXXXXXXXXXXXXKEVDYAIFVEAKGLNFEAHFALSGEHHILLAEIAQKTA 1088
                                  K+++  IFV+AKGLNFE H+    E  ILLAE+AQK A
Sbjct: 1435 QKLADSKESKSESNKTTTKPRKKKINRTIFVDAKGLNFEVHYIFKKEPRILLAEVAQKAA 1494

Query: 1087 RRVYVKESKNIDRCSVVEPKRSTDRIALQTAGVNFLAFWDLQDDLDINRVVTNDIHAMLN 908
            + VYVKESKNI+ CSV EPK+  + ++LQTAGVNF AFWDL+D LDIN++ +NDIHAMLN
Sbjct: 1495 KSVYVKESKNIELCSVTEPKKD-EPLSLQTAGVNFQAFWDLEDHLDINKITSNDIHAMLN 1553

Query: 907  TYGVEAARATIINEVKAVFEPYGIRVNTRHLSLIADFMSAHGGYRPMNRIGMMEFNTSPF 728
            TYGVEAARATII EVK VF+ YGIRVN RHL LIADFM+ HGGYRPMNRIGM +FNTSPF
Sbjct: 1554 TYGVEAARATIIKEVKGVFDAYGIRVNIRHLMLIADFMTFHGGYRPMNRIGMTDFNTSPF 1613

Query: 727  SKMTFETATRFIVEAAFHGESDVLQSPSASVCLGQPVKFGTGTFGLLQKL 578
             KMTFETAT+FIV +AFHGE D L +PSASVCLGQPVK GTG F L+Q L
Sbjct: 1614 GKMTFETATKFIVGSAFHGEVDTLDAPSASVCLGQPVKMGTGCFDLMQNL 1663


>ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Elaeis
            guineensis]
          Length = 1674

 Score = 2193 bits (5682), Expect = 0.0
 Identities = 1125/1680 (66%), Positives = 1308/1680 (77%), Gaps = 34/1680 (2%)
 Frame = -3

Query: 5515 ANEAPSEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINETDS 5336
            + EA SE+VD+++F FY+AE+I++ISVKKIT PDLLD K  PVP+GLYDPA+GPIN+TDS
Sbjct: 6    SEEAASEVVDSVRFRFYTAEEIRRISVKKITKPDLLDSKNAPVPDGLYDPAMGPINDTDS 65

Query: 5335 CKTCGLLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQYVAK 5156
            CK+CG L++RCPGHCGHIDL KPLYNPLLF  L+NLLQITCF C RFR  E+KV++Y  +
Sbjct: 66   CKSCGQLSFRCPGHCGHIDLAKPLYNPLLFRNLQNLLQITCFFCRRFRLNEEKVQRYAEQ 125

Query: 5155 LEHIARGDVVAAKKTETSLLAEAFSEDEDNGKDIKEKNAGVASCELETDSKDAKQK-TWT 4979
            L+ IA+GDVV A+  E     E +  D       + ++A +++ E      + KQ+ TWT
Sbjct: 126  LDLIAKGDVVGARTLEAHSWGEYYFPDGG-----ETESAVISTNESLLKITNLKQQQTWT 180

Query: 4978 SLQYAEAVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLSKTTKDSDIRADFIRGSDVG 4799
            SLQY+EA+S++S  ++ + KKCANCGR NP I+SPTFGWL+K  + SDIR +FI G D+G
Sbjct: 181  SLQYSEAISIMSKFLREKSKKCANCGRKNPTITSPTFGWLNKAMQASDIRTNFIIGYDLG 240

Query: 4798 LSSTAEDKSADAN---GDGTSQSEEELLAPTNVS--------------EQLRNLPPDFFK 4670
            LSST ED++A+ +   GD  SQ++EE  +   V               +Q R+LPP+  K
Sbjct: 241  LSST-EDQNAEGSQPRGDSASQTDEEPSSTAKVEGKTKKQSRNLQKTKKQSRDLPPEIAK 299

Query: 4669 RLYSSAGQKHLLPSEAQLILEGLWRNEAQLCSLICDIQQNNLNVTGKNKAYAMFFLKVLL 4490
            ++ SS  +KHLLPSE + IL+ LW+N+A++C+LICD+Q+ +LN +G++K YAMFFLK LL
Sbjct: 300  QILSSGQKKHLLPSEVEAILKDLWKNQAKICALICDLQRRSLNASGRDKGYAMFFLKTLL 359

Query: 4489 VPPSKFRPCAFGG-RQVVEHPQNLLLSKVQESNIALQELITSDPDHPNTIRRWMDLQRSV 4313
            VPPSKFRP A  G R V+EHPQN+LLSKVQESNIAL+ +IT  PDHP+ +RRWMDLQR+V
Sbjct: 360  VPPSKFRPPAGSGTRGVLEHPQNVLLSKVQESNIALRNVITDGPDHPDIVRRWMDLQRNV 419

Query: 4312 TVLFDSSKGLAKSEKDTNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIG 4133
             VLFDS+KG  K+E++ NGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIG
Sbjct: 420  NVLFDSTKGWVKTEREVNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIG 479

Query: 4132 IPPYFALKLTYPERVTPWNVNKLRHAVINGADIHPGASHYMDKDRLYKLQVSRSMRNAIG 3953
            IPPYFAL+LTYPERVTPWNVNKLR+A+INGADIHPGA+HY DK+R+YKLQ+ R+MRNAI 
Sbjct: 480  IPPYFALRLTYPERVTPWNVNKLRYAIINGADIHPGATHYKDKERMYKLQLGRNMRNAIS 539

Query: 3952 RKLPTSRGVTSQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGE 3773
            RKLPTS+GV  Q GKGPE +FEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL GE
Sbjct: 540  RKLPTSKGVLVQQGKGPESEFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGE 599

Query: 3772 KTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAMNIVNANKQYIVPTSGDPIRGLIQ 3593
            KTLRMHYANCSTYNADFDGDEMNVH PQDEISRAEA+NIVNANKQY+VPTSGDPIRGLIQ
Sbjct: 600  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYVVPTSGDPIRGLIQ 659

Query: 3592 DHIVSAVLLSKQDTFLTREQYHQLLYASCLPPAVNSLQPGIFGQKVSVLNSDDEIQPIPP 3413
            DHIVSAVLL+K DTFLTRE+YHQLLYAS +PP  +S QPG FG+KV  L+SD EIQP+ P
Sbjct: 660  DHIVSAVLLTKLDTFLTREEYHQLLYASFMPPIASS-QPGRFGRKVCTLSSDAEIQPLLP 718

Query: 3412 AIWKPKPLWTGKQVITAILCHITRGRSPFTIEKDGRIPKEYFAKDSKEFSMHIYKNEFIH 3233
            AIWKP PLWTGKQVITAIL HITRGR PFT+E  GRIPKEY  KD  E  + IYKN+ IH
Sbjct: 719  AIWKPIPLWTGKQVITAILNHITRGRPPFTVENKGRIPKEYLGKDHNELKLLIYKNDLIH 778

Query: 3232 GIIDKAQFGKYGLVHIVHELYGADTAGSLLSIFSRLFTTFLQMHAFTCGVDDLLLLQEAD 3053
            G++DKAQFGKYGLVH VHELYGADTAG LLS+FSRLFT FLQMH FTCGVDDLLL Q +D
Sbjct: 779  GMVDKAQFGKYGLVHTVHELYGADTAGILLSVFSRLFTLFLQMHGFTCGVDDLLLDQSSD 838

Query: 3052 MGREVMLEKSEAQSGDVHFRFTGTKRGDIDPLDLCREIEKVVRSNGESATARLDRMMSNS 2873
            M R+ +LEKSEA S DVH RFT  K GD DP+ L REIEK +  N ESATA LDRMMS+S
Sbjct: 839  MERKRILEKSEALSEDVHIRFTAFKDGDRDPVKLQREIEKTLCRNRESATASLDRMMSSS 898

Query: 2872 LNVLTSEVNKALFPAGLQKPFPRNCLSLMTTTGAKGGLVNLTQISSLLGQQELEGKRVPR 2693
            +NVLTSEVN+ LFP+GLQKPF RNCLSLMTTTGAKGGLVN+TQISSLLGQQELEGKRVPR
Sbjct: 899  MNVLTSEVNQTLFPSGLQKPFLRNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRVPR 958

Query: 2692 MISGKTLPSFPPWDTSCRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYL 2513
            M+SGKTLP FPPWD SCRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTA+KTSRSGYL
Sbjct: 959  MVSGKTLPCFPPWDISCRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYL 1018

Query: 2512 QRCLIKNLESLKVCYDYTVRDADGSVVQFAYGEDGVDVLKTSYITEVQVLSNNQRVVLES 2333
            QRCL+KNLE LKV YD+TVRDADGSV+QF YGEDGVDVLKTS+I+E+  L+ NQ VVL+ 
Sbjct: 1019 QRCLVKNLECLKVSYDHTVRDADGSVIQFMYGEDGVDVLKTSFISELGALAANQTVVLDR 1078

Query: 2332 LSCQLEDAHLSKSNSFIKELPDSLRERATNLSRQLSKS--GSRHQIXXXXXXXXXXXXXX 2159
            LS QLEDAHLSKSN ++KELP  LRE AT  +R LSK+  GS  QI              
Sbjct: 1079 LSSQLEDAHLSKSNGYLKELPYLLRENATTFAR-LSKNHQGSLRQIRRKDLMKLMKLKYL 1137

Query: 2158 XXLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMSAKEAIRT 1979
              LAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILM+A   IRT
Sbjct: 1138 SSLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASADIRT 1197

Query: 1978 PIMTCPLLDGMTKEDGERFAAKLRRICVADIVESMEVSTVPFYIHKRRVSTLYKLKMKLY 1799
            P+M CPL DG T+E  E+ A+KLRR+C+ADIVESMEV +VPF IH   VST+YKL+M LY
Sbjct: 1198 PVMKCPLHDGRTREAAEQLASKLRRVCLADIVESMEVCSVPFCIHGNEVSTIYKLRMNLY 1257

Query: 1798 PCGLYPPHIDISLEDCRAILRTTFISAMEDAIKKHLDLISRISGIEVVSGKGD-NSXXXX 1622
            P  LYPPH D++LEDC   LRT FI AMEDAI KHLD+I +IS I  V+ KG+ N     
Sbjct: 1258 PPELYPPHSDLTLEDCMTTLRTYFIDAMEDAIAKHLDMICKISDINSVTAKGESNLEEGT 1317

Query: 1621 XXXXXGSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEKRKKQTCDELEYEDGME 1442
                 GSKS                                AEKRKK+  DE+EYEDG+E
Sbjct: 1318 DEDEHGSKS----THREDKDNSRGFDDVDDDDGINEDEGMDAEKRKKRASDEMEYEDGIE 1373

Query: 1441 KQTSVSVDEHDGVSSSGFESEVDQAEAEEDYEIGGDDPVTVAEEKMPEDDLGVVADEESP 1262
            K+ S   DEHDG + SGFESE+DQ EA+EDY +GGD  + V +  +  ++      +  P
Sbjct: 1374 KENSAKADEHDGETQSGFESEIDQVEADEDYTVGGDPSMEVEDPSLEAEETPESPSKAEP 1433

Query: 1261 DNPVPXXXXXXXXXXXXXXXKE------------VDYAIFVEAKGLNFEAHFALSGEHHI 1118
               +                 E            ++  IFV+AKGL FE H+    E  I
Sbjct: 1434 TPTLEDGKKKQKLADNKESKSESKKKTTKPRKKKINRTIFVDAKGLTFEVHYIFKKEPRI 1493

Query: 1117 LLAEIAQKTARRVYVKESKNIDRCSVVEPKRSTDRIALQTAGVNFLAFWDLQDDLDINRV 938
            LLAE+AQK A+ VYVKESKNI+ CSV EPK+  + ++LQTAGVNF AFWDL+D LDIN++
Sbjct: 1494 LLAEVAQKAAKSVYVKESKNIELCSVPEPKKD-EPLSLQTAGVNFQAFWDLEDHLDINKI 1552

Query: 937  VTNDIHAMLNTYGVEAARATIINEVKAVFEPYGIRVNTRHLSLIADFMSAHGGYRPMNRI 758
             +NDIHAMLNTYGVEAARATII EVK VF+ YGIRVN RHL+LIADFM+ HGGYRPMNRI
Sbjct: 1553 TSNDIHAMLNTYGVEAARATIIKEVKGVFDAYGIRVNIRHLTLIADFMTFHGGYRPMNRI 1612

Query: 757  GMMEFNTSPFSKMTFETATRFIVEAAFHGESDVLQSPSASVCLGQPVKFGTGTFGLLQKL 578
            GM  FNTSPF KMTFETAT+FIV +AFHGE D L +PSASVCLGQPVK GTG F L+Q L
Sbjct: 1613 GMNNFNTSPFGKMTFETATKFIVGSAFHGEVDTLDAPSASVCLGQPVKMGTGCFDLMQNL 1672


>gb|AIO05696.1| putative RNA polymerase AI large subunit, partial [Cocos nucifera]
          Length = 1669

 Score = 2179 bits (5645), Expect = 0.0
 Identities = 1120/1679 (66%), Positives = 1304/1679 (77%), Gaps = 33/1679 (1%)
 Frame = -3

Query: 5515 ANEAPSEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINETDS 5336
            + EA SE+VD++ F FY+AE+I+KISVKKIT P LLD K  PVP+GLYDPA+GPIN+TDS
Sbjct: 6    SEEAASEVVDSVHFHFYTAEEIRKISVKKITKPGLLDSKNAPVPDGLYDPAMGPINDTDS 65

Query: 5335 CKTCGLLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQYVAK 5156
            CK+CG L++RCPGHCGHIDL K LYNPLLF  L+NLLQITCF CHRFR  E+KV++Y  +
Sbjct: 66   CKSCGQLSFRCPGHCGHIDLAKQLYNPLLFRNLQNLLQITCFFCHRFRLNEEKVQRYAKQ 125

Query: 5155 LEHIARGDVVAAKKTETSLLAEAFSEDEDNGKDIKEKNAGVASCELETDSKDAKQKTWTS 4976
            L+ IA+GD+V A+  E    +  F E E+    +   N  +      T+ K  +Q+TWTS
Sbjct: 126  LDLIAKGDIVGARTLEAR--SWGFPEGEETKSAVISTNESLLKI---TNLK--QQQTWTS 178

Query: 4975 LQYAEAVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLSKTTKDSDIRADFIRGSDVGL 4796
            LQY+EA+S++S  ++ + KKCANCGR NP I+SPTFGWL+K  + SDIR +FI G D+GL
Sbjct: 179  LQYSEALSIMSKFLREKSKKCANCGRKNPTITSPTFGWLNKAMQASDIRTNFIIGYDLGL 238

Query: 4795 SSTAEDKSADAN---GDGTSQSEEELLAPTNVS--------------EQLRNLPPDFFKR 4667
            SST ED++A+A+   GD  SQ++EE  +   V               +Q  +LPP+  K+
Sbjct: 239  SST-EDQNAEASQSRGDSASQTDEEPSSIAKVERKTKKQSRDLQKTKKQSMDLPPEIAKQ 297

Query: 4666 LYSSAGQKHLLPSEAQLILEGLWRNEAQLCSLICDIQQNNLNVTGKNKAYAMFFLKVLLV 4487
            + SS  +KHLLPSE + IL+ LW+N+A++C+L+CD+Q  +LN +G++K YAMFFLK LLV
Sbjct: 298  MLSSGQKKHLLPSEVEAILKDLWKNQAKICALMCDLQHRSLNASGRDKGYAMFFLKTLLV 357

Query: 4486 PPSKFRPCAFGG-RQVVEHPQNLLLSKVQESNIALQELITSDPDHPNTIRRWMDLQRSVT 4310
            PPSKFRP A  G R V+EHPQN+LLSKVQESNIAL+ +I + PDHP+ +RRWMDLQR+V 
Sbjct: 358  PPSKFRPPAGSGTRGVLEHPQNVLLSKVQESNIALRNVIANGPDHPDIVRRWMDLQRNVN 417

Query: 4309 VLFDSSKGLAKSEKDTNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGI 4130
            VLFDS+KG  K+E++ NGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGI
Sbjct: 418  VLFDSTKGWVKTEREVNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGI 477

Query: 4129 PPYFALKLTYPERVTPWNVNKLRHAVINGADIHPGASHYMDKDRLYKLQVSRSMRNAIGR 3950
            PPYFAL+LTYPERVTPWNVNKLR+A+INGADIHPGA+HY DK+R+YKLQ+ R+MRNAI R
Sbjct: 478  PPYFALRLTYPERVTPWNVNKLRYAIINGADIHPGATHYKDKERMYKLQLGRNMRNAISR 537

Query: 3949 KLPTSRGVTSQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGEK 3770
            KLPTSRGV  Q GKGPE +FEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL GEK
Sbjct: 538  KLPTSRGVLVQQGKGPESEFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEK 597

Query: 3769 TLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAMNIVNANKQYIVPTSGDPIRGLIQD 3590
            TLRMHYANCSTYNADFDGDEMNVH PQDEISRAEA+NIVNANKQYIVPTSGDPIRGLIQD
Sbjct: 598  TLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGLIQD 657

Query: 3589 HIVSAVLLSKQDTFLTREQYHQLLYASCLPPAVNSLQPGIFGQKVSVLNSDDEIQPIPPA 3410
            HIVSAVLL+K DTFLTRE+YHQLLYAS +PP  +S QPG FG+KV +L+ DDEIQP+ PA
Sbjct: 658  HIVSAVLLTKLDTFLTREEYHQLLYASFMPPIASS-QPGRFGRKVCILSLDDEIQPLLPA 716

Query: 3409 IWKPKPLWTGKQVITAILCHITRGRSPFTIEKDGRIPKEYFAKDSKEFSMHIYKNEFIHG 3230
            IWKP PLWTGKQVITAIL HIT+GR PFT+E  GRIPKEY  KD  E  + IYKN+ IHG
Sbjct: 717  IWKPIPLWTGKQVITAILNHITQGRPPFTVENKGRIPKEYLGKDHNELKLLIYKNDLIHG 776

Query: 3229 IIDKAQFGKYGLVHIVHELYGADTAGSLLSIFSRLFTTFLQMHAFTCGVDDLLLLQEADM 3050
            +IDKAQFGKYGLVH VHELYGADTAG LLS+FSRLFT FLQMH FTCGVDDLLL Q +DM
Sbjct: 777  MIDKAQFGKYGLVHTVHELYGADTAGILLSVFSRLFTLFLQMHGFTCGVDDLLLDQSSDM 836

Query: 3049 GREVMLEKSEAQSGDVHFRFTGTKRGDIDPLDLCREIEKVVRSNGESATARLDRMMSNSL 2870
             R+ +LEKSEA S DVH RFT  K GD DP+ L  EIE + R N ESAT  LDRMMS+S+
Sbjct: 837  ERKRILEKSEALSEDVHIRFTAFKDGDRDPVKLQMEIEVLCR-NRESATTLLDRMMSSSM 895

Query: 2869 NVLTSEVNKALFPAGLQKPFPRNCLSLMTTTGAKGGLVNLTQISSLLGQQELEGKRVPRM 2690
            NVLTSEVN+ LFP+GLQKPF RNCLSLMTTTGAKGGLVN+TQISSLLGQQELEGKRVPRM
Sbjct: 896  NVLTSEVNQTLFPSGLQKPFLRNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRVPRM 955

Query: 2689 ISGKTLPSFPPWDTSCRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQ 2510
            +SGKTLP FPPWD SCRAGGFISDRFL+GLRPQEYYFHCMAGRDGLVDTA+KTSRSGYLQ
Sbjct: 956  VSGKTLPCFPPWDISCRAGGFISDRFLSGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQ 1015

Query: 2509 RCLIKNLESLKVCYDYTVRDADGSVVQFAYGEDGVDVLKTSYITEVQVLSNNQRVVLESL 2330
            RCL+KNLE LKV YD+TVRDADGSV+QF YGEDGVDVLKTS+I+E+  L+ NQ VVL+ L
Sbjct: 1016 RCLVKNLECLKVSYDHTVRDADGSVIQFMYGEDGVDVLKTSFISELGALAANQTVVLDRL 1075

Query: 2329 SCQLEDAHLSKSNSFIKELPDSLRERATNLSRQLSKS--GSRHQIXXXXXXXXXXXXXXX 2156
            S QLEDAHLSKSN +IKELP  LRE AT  +R LSK+  GS HQI               
Sbjct: 1076 SSQLEDAHLSKSNGYIKELPYLLRENATTFAR-LSKNHQGSLHQIRRRDLMKLMKLKYMS 1134

Query: 2155 XLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMSAKEAIRTP 1976
             LAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILM+A   IRTP
Sbjct: 1135 SLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASADIRTP 1194

Query: 1975 IMTCPLLDGMTKEDGERFAAKLRRICVADIVESMEVSTVPFYIHKRRVSTLYKLKMKLYP 1796
            +M CPL DG T+ED ER A+KLRR+C+ADIVESMEV +VPF IH   VST+YKL+M LYP
Sbjct: 1195 VMKCPLHDGRTREDAERLASKLRRVCLADIVESMEVCSVPFCIHGNEVSTIYKLRMNLYP 1254

Query: 1795 CGLYPPHIDISLEDCRAILRTTFISAMEDAIKKHLDLISRISGIEVVSGKGD-NSXXXXX 1619
              LYP H D++LEDC   LRT FI  MEDAI KHLD+I +IS I  V+ KG+ N      
Sbjct: 1255 PELYPQHSDLTLEDCMTTLRTNFIDDMEDAIAKHLDMICKISDINSVTAKGESNLAEGTD 1314

Query: 1618 XXXXGSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEKRKKQTCDELEYEDGMEK 1439
                GSKS                                AEKRK++  DE+EYEDG+EK
Sbjct: 1315 EGEHGSKS----THGEDKDNSRGFDDVDDDDGINEDEGMDAEKRKQRASDEMEYEDGIEK 1370

Query: 1438 QTSVSVDEHDGVSSSGFESEVDQAEAEEDYEIGGDDPVTVAEEKMPEDDLGVVADEESPD 1259
            ++S   DEHDG + SGFESE+DQ EA+EDY +GGD  + V +  +  ++      +  P 
Sbjct: 1371 ESSAKADEHDGDTQSGFESEIDQVEADEDYTVGGDPSMEVEDPSLEVEETPESPSKAEPT 1430

Query: 1258 NPVPXXXXXXXXXXXXXXXKE------------VDYAIFVEAKGLNFEAHFALSGEHHIL 1115
              +                 E            ++  IFV+AKGL FE H+    E  IL
Sbjct: 1431 PTLEDGKKKQKLADSKESKSESKKKKTKSRKKKINRTIFVDAKGLKFEVHYIFKEEPRIL 1490

Query: 1114 LAEIAQKTARRVYVKESKNIDRCSVVEPKRSTDRIALQTAGVNFLAFWDLQDDLDINRVV 935
            LAE+AQKTA+ VYV++SKNI+ CSV EPK+  + ++LQTAGVNF AFWDL+D LD+N++ 
Sbjct: 1491 LAEVAQKTAKSVYVRDSKNIELCSVAEPKKD-EPLSLQTAGVNFQAFWDLEDHLDVNKIT 1549

Query: 934  TNDIHAMLNTYGVEAARATIINEVKAVFEPYGIRVNTRHLSLIADFMSAHGGYRPMNRIG 755
            +NDIHAMLNTYGVE ARATII EVK VF+ YGIRVN RHL+LIADFM+ HGGYRPMNRIG
Sbjct: 1550 SNDIHAMLNTYGVEVARATIIKEVKGVFDAYGIRVNIRHLTLIADFMTFHGGYRPMNRIG 1609

Query: 754  MMEFNTSPFSKMTFETATRFIVEAAFHGESDVLQSPSASVCLGQPVKFGTGTFGLLQKL 578
            M  FNTSPF KMTFETAT+FIV +AFHGE D L +PSASVCLGQPVK GTG F L+Q L
Sbjct: 1610 MNNFNTSPFGKMTFETATKFIVGSAFHGEVDALDAPSASVCLGQPVKMGTGCFDLMQNL 1668


>ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Musa
            acuminata subsp. malaccensis]
          Length = 1640

 Score = 2093 bits (5423), Expect = 0.0
 Identities = 1076/1657 (64%), Positives = 1266/1657 (76%), Gaps = 13/1657 (0%)
 Frame = -3

Query: 5509 EAPSEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINETDSCK 5330
            EA S +VD++ FSFY++E+++KISVKKIT PDLLD K  PVP+GLYDPALGP+N+TDSCK
Sbjct: 5    EAASGVVDSVYFSFYTSEEVRKISVKKITKPDLLDAKNSPVPDGLYDPALGPLNDTDSCK 64

Query: 5329 TCGLLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQYVAKLE 5150
            +CG L+  CPGHCGHIDL +PLYNPLLF  L+ LLQITCF CH+F+  E+KVK+YVA L+
Sbjct: 65   SCGQLSVCCPGHCGHIDLARPLYNPLLFKTLQGLLQITCFFCHKFKINEEKVKRYVALLD 124

Query: 5149 HIARGDVVAAKKTETSLLAEAFSEDEDNGKDIKEKNAGVASCELETDSKDAKQKTWTSLQ 4970
             I +GD+  A+  E +  +E F  +E   + +   N              AK  TWTSLQ
Sbjct: 125  LIVKGDINGARSLEANSWSEIFFPEEGTAESVTPSNFD-----------KAKHLTWTSLQ 173

Query: 4969 YAEAVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLSKTTKDSDIRADFIRGSDVGLSS 4790
             +EA+SVLS  M+ R KKC NCG+ NP I SP FGWL+KTT+ SDIRA+FI  S++ LSS
Sbjct: 174  QSEALSVLSKFMRERRKKCDNCGKKNPTIHSPIFGWLNKTTQGSDIRANFIIDSNLDLSS 233

Query: 4789 TAEDKSA--DANGDGTSQSEEELLAP---TNVSEQLRNLPPDFFKRLYSSAGQKHLLPSE 4625
            +    S+   + G+  S+ +EE   P       ++L +LPP+F K++ SS+GQKHLLPSE
Sbjct: 234  SEAKYSSLTQSRGESASEMDEESPLPQKKVKEDKELCDLPPEFIKQM-SSSGQKHLLPSE 292

Query: 4624 AQLILEGLWRNEAQLCSLICDIQQNNLNVTGKNKAYAMFFLKVLLVPPSKFRPCA-FGGR 4448
             +LIL  LW+NEA LC LI  I   + +++  NK  AMFFLK LLVPPSKFRP A   GR
Sbjct: 293  VELILNNLWKNEANLCMLISGIHCKSSSISRGNKGCAMFFLKTLLVPPSKFRPAARTSGR 352

Query: 4447 QVVEHPQNLLLSKVQESNIALQELITSDPDHPNTIRRWMDLQRSVTVLFDSSKGLAKSEK 4268
             V+EHPQN LLSKVQ++NI L+  I +D DHP+ +RRWMDLQ++V VLFD +KG AKS+K
Sbjct: 353  GVLEHPQNTLLSKVQQANIGLKNCIIADLDHPDILRRWMDLQKTVNVLFDGTKGFAKSDK 412

Query: 4267 DTNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALKLTYPERV 4088
            + +GIRQLLEKK+GILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAL+LTYPERV
Sbjct: 413  EASGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERV 472

Query: 4087 TPWNVNKLRHAVINGADIHPGASHYMDKDRLYKLQVSRSMRNAIGRKLPTSRGVTSQSGK 3908
            TPWNVNKLR A+INGA+IHPGA+HY DK+R+YKLQ S++MR+AI RKLPTSRG+T+Q G 
Sbjct: 473  TPWNVNKLRCAIINGANIHPGATHYKDKERMYKLQASQTMRSAISRKLPTSRGMTAQLGM 532

Query: 3907 GPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGEKTLRMHYANCSTYNA 3728
            GPE +FEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL GEKTLRMHYANCSTYNA
Sbjct: 533  GPESEFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYANCSTYNA 592

Query: 3727 DFDGDEMNVHFPQDEISRAEAMNIVNANKQYIVPTSGDPIRGLIQDHIVSAVLLSKQDTF 3548
            DFDGDEMNVH PQDEISRAEA+NIVNANKQYIVPTSG PIRGLIQDHIVSAVLL+K DTF
Sbjct: 593  DFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGHPIRGLIQDHIVSAVLLTKMDTF 652

Query: 3547 LTREQYHQLLYASCLPPAVNSLQPGIFGQKVSVLNSDDEIQPIPPAIWKPKPLWTGKQVI 3368
            LTRE+YHQLLYASC+PP   S + G FGQKVSV  SD EIQP+PPAIWKP PLWTGKQVI
Sbjct: 653  LTREEYHQLLYASCVPPTSYSQRNG-FGQKVSVSWSDYEIQPLPPAIWKPTPLWTGKQVI 711

Query: 3367 TAILCHITRGRSPFTIEKDGRIPKEYFAKDSKEFSMHIYKNEFIHGIIDKAQFGKYGLVH 3188
            TAIL  +TRG  P TIEK GRI KEY  +D     +HI+ N+ +HG+IDKAQFG YGLVH
Sbjct: 712  TAILNFVTRGHLPLTIEKRGRIQKEYIGEDHTLLVLHIHNNDLVHGMIDKAQFGTYGLVH 771

Query: 3187 IVHELYGADTAGSLLSIFSRLFTTFLQMHAFTCGVDDLLLLQEADMGREVMLEKSEAQSG 3008
             VHELYG D AG LLS+FSRLFT+FLQMH FTCGVDDLLL Q++DM R+ +LEKSE Q+ 
Sbjct: 772  AVHELYGPDVAGMLLSVFSRLFTSFLQMHGFTCGVDDLLLSQKSDMERKKILEKSETQAE 831

Query: 3007 DVHFRFTGTKRGDIDPLDLCREIEKVVRSNGESATARLDRMMSNSLNVLTSEVNKALFPA 2828
            +VH RFT TK GD DP++L REIEKV+R NG+SATA LDRMMSNSLN LTSE+N+ LFP 
Sbjct: 832  EVHMRFTRTKDGDGDPMELQREIEKVLRGNGDSATALLDRMMSNSLNSLTSEINQTLFPN 891

Query: 2827 GLQKPFPRNCLSLMTTTGAKGGLVNLTQISSLLGQQELEGKRVPRMISGKTLPSFPPWDT 2648
            GL KPF +NCLSLMTTTGAKGGLVN+TQISSLLGQQELEGKRVPRM+SGKTLP FPPWD 
Sbjct: 892  GLSKPFLKNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRVPRMVSGKTLPCFPPWDI 951

Query: 2647 SCRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLIKNLESLKVCY 2468
            S R+GGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLIKNLE LKV Y
Sbjct: 952  SSRSGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLIKNLECLKVSY 1011

Query: 2467 DYTVRDADGSVVQFAYGEDGVDVLKTSYITEVQVLSNNQRVVLESLSCQLEDAHLSKSNS 2288
            D+TVRDADGSVVQF YGEDGVDVLKTSYI+E ++LS+N+ VVL+  S Q+ D  L+KSN+
Sbjct: 1012 DHTVRDADGSVVQFIYGEDGVDVLKTSYISEFKMLSDNRNVVLQKFSDQIVDTSLAKSNA 1071

Query: 2287 FIKELPDSLRERATNLSRQLSKSGSRHQIXXXXXXXXXXXXXXXXLAEPGEPVGVIAAQS 2108
            +I+ELP SLR+ AT+   +  KS S HQI                LAEPGE VGV+AAQS
Sbjct: 1072 YIRELPCSLRDNATDFVLKKQKS-SPHQINKKDFMKLMKLKYLSSLAEPGEAVGVVAAQS 1130

Query: 2107 VGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMSAKEAIRTPIMTCPLLDGMTKEDGE 1928
            VGEPSTQMTLNTFHLAG+G+MNVTLGIPRLQEILM+A + IRTP+M CPL    TK+D E
Sbjct: 1131 VGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKDIRTPLMNCPLHAWKTKDDAE 1190

Query: 1927 RFAAKLRRICVADIVESMEVSTVPFYIHKRRVSTLYKLKMKLYPCGLYPPHIDISLEDCR 1748
            R AAKLRR+ VAD+VE MEV TVPF IH+ ++ST+YKLKM LYP  LYP   +++LEDCR
Sbjct: 1191 RLAAKLRRVSVADVVERMEVCTVPFSIHRNQISTIYKLKMTLYPSELYPSFSELTLEDCR 1250

Query: 1747 AILRTTFISAMEDAIKKHLDLISRISGIEVVSGKGDNSXXXXXXXXXGSKSXXXXXXXXX 1568
             +L  TF+ AMEDAI KH+D IS+IS I+VVSGK +N            +          
Sbjct: 1251 EVLEMTFVEAMEDAIAKHVDTISKISDIKVVSGKEEND---------FEEGVDEDESRNK 1301

Query: 1567 XXXXXXXXXXXXXXXXXXXXXXXAEKRKKQTCDELEYEDGMEKQTSVSVDEHDGVSSSGF 1388
                                    ++RK+Q  DE+EY+DG+EK++ V+  EHD  + SGF
Sbjct: 1302 SSMEENADGGDEDDESGDDQGIDYKRRKQQANDEVEYDDGIEKESFVAAGEHDEETQSGF 1361

Query: 1387 ESEVDQAEAEEDYEIGGDDPVTVAEEKMPE-----DDLGVVADEESPDNPVP--XXXXXX 1229
            ESE+D  EA+EDY +GG  P    +   PE     D   +  D++     V         
Sbjct: 1362 ESEIDHLEADEDYLMGGGSPGVDMDLATPESPSKADSTPISEDDKKKSKSVEKGKKETKS 1421

Query: 1228 XXXXXXXXXKEVDYAIFVEAKGLNFEAHFALSGEHHILLAEIAQKTARRVYVKESKNIDR 1049
                     K++   I+V A+GL FE H+    E  ILLAEIAQ+TA+RVYVKE KNI+R
Sbjct: 1422 KAKKPKRSKKKIRRTIYVMAEGLKFEVHYIFRSEPRILLAEIAQRTAKRVYVKEYKNIER 1481

Query: 1048 CSVVEPKRSTDRIALQTAGVNFLAFWDLQDDLDINRVVTNDIHAMLNTYGVEAARATIIN 869
            CS+ E K+STD   LQ AGVNF   WDL++ LDIN + +NDIHAMLNTYGVEAARATII 
Sbjct: 1482 CSLKENKKSTDPFMLQIAGVNFKTLWDLEEYLDINHIYSNDIHAMLNTYGVEAARATIIQ 1541

Query: 868  EVKAVFEPYGIRVNTRHLSLIADFMSAHGGYRPMNRIGMMEFNTSPFSKMTFETATRFIV 689
            EV  VF  YGI+VN RHLSLIADFM+ HGGYRPMNR+GM +FNTSPF KMTFETAT+FIV
Sbjct: 1542 EVTDVFGLYGIQVNIRHLSLIADFMTFHGGYRPMNRVGMGDFNTSPFGKMTFETATKFIV 1601

Query: 688  EAAFHGESDVLQSPSASVCLGQPVKFGTGTFGLLQKL 578
            E+AFHGE D L+SPSASV LGQPVK GTG F L+Q L
Sbjct: 1602 ESAFHGEVDTLESPSASVSLGQPVKMGTGCFDLMQNL 1638


>ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Musa
            acuminata subsp. malaccensis]
          Length = 1641

 Score = 2082 bits (5395), Expect = 0.0
 Identities = 1065/1658 (64%), Positives = 1262/1658 (76%), Gaps = 13/1658 (0%)
 Frame = -3

Query: 5512 NEAPSEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINETDSC 5333
            ++A S +V  + F+FY++E+I+KISVKKIT PDLLD K  P+P+GLYDPALGP+N+ DSC
Sbjct: 3    DQAASGVVKYVHFNFYTSEEIRKISVKKITKPDLLDAKNSPIPDGLYDPALGPLNDNDSC 62

Query: 5332 KTCGLLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQYVAKL 5153
            K+CG L+ RCPGHCGHIDL KPLYNPLLF  L+ LLQITCF CH+F+  E+KVK+YVA+L
Sbjct: 63   KSCGQLSVRCPGHCGHIDLAKPLYNPLLFKTLQGLLQITCFFCHKFKINEEKVKRYVAQL 122

Query: 5152 EHIARGDVVAAKKTETSLLAEAFSEDEDNGKDIKEKNAGVASCELETDSKDAKQKTWTSL 4973
            + I +GD+  A+  E +  +E F  +E+  + I              D+ ++K  TWTSL
Sbjct: 123  DLIVKGDINGARSLEANTWSEIFFPEEETAESITSN----------FDNANSKHLTWTSL 172

Query: 4972 QYAEAVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLSKTTKDSDIRADFIRGSDVGLS 4793
            Q +EA+S+ S  M+ R KKC NCG+ NP I+SP FGWL+KTT++SDIRA+FI  S +  S
Sbjct: 173  QQSEALSIFSKFMRERRKKCDNCGKKNPTINSPIFGWLNKTTQESDIRANFILDSSLDQS 232

Query: 4792 STAEDKSADANGDGTSQSEEELLAPTNVSE-QLRNLPPDFFKRLYSSAGQKHLLPSEAQL 4616
            S+    S+     G S SE +  +P +  + +L +LPP+F K++ SS+GQKHLLPSE + 
Sbjct: 233  SSEAKYSSITQSRGESASEMDEESPLSKKKVKLGDLPPEFIKQM-SSSGQKHLLPSEVEF 291

Query: 4615 ILEGLWRNEAQLCSLICDIQQNNLNVTGKNKAYAMFFLKVLLVPPSKFRPCA-FGGRQVV 4439
            IL  LW+NEA LC LI DI   NL+++  NK +AMFFLK LL+PPSKFRP A   GR V+
Sbjct: 292  ILNNLWKNEANLCMLISDIHCKNLSISRGNKGFAMFFLKTLLIPPSKFRPAAGSSGRGVL 351

Query: 4438 EHPQNLLLSKVQESNIALQELITSDPDHPNTIRRWMDLQRSVTVLFDSSKGLAKSEKDTN 4259
            EHPQN LLSKVQ++NIAL+  I ++PDHP+ +R WMDLQ+ V VLFDS+KG AKS+K+ +
Sbjct: 352  EHPQNTLLSKVQQANIALKNCIVANPDHPDILRSWMDLQKCVNVLFDSTKGFAKSDKEAS 411

Query: 4258 GIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALKLTYPERVTPW 4079
            GIRQLLEKK+GILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYF+L+LTYPERVTPW
Sbjct: 412  GIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFSLRLTYPERVTPW 471

Query: 4078 NVNKLRHAVINGADIHPGASHYMDKDRLYKLQVSRSMRNAIGRKLPTSRGVTSQSGKGPE 3899
            NVNKLR A+INGADIHPGA+HY DK+R+YKLQ S++MR+AI RKLPTSRG+T+Q G GPE
Sbjct: 472  NVNKLRCAIINGADIHPGATHYKDKERMYKLQASQNMRSAISRKLPTSRGMTAQLGTGPE 531

Query: 3898 YDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGEKTLRMHYANCSTYNADFD 3719
             +FEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL GEKTLRMHYANCSTYNADFD
Sbjct: 532  SEFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGEKTLRMHYANCSTYNADFD 591

Query: 3718 GDEMNVHFPQDEISRAEAMNIVNANKQYIVPTSGDPIRGLIQDHIVSAVLLSKQDTFLTR 3539
            GDEMNVH PQDEISRAEA+NIVNANKQYIVPTSG PIRGLIQDHIVSAVLL+K DTFLTR
Sbjct: 592  GDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGHPIRGLIQDHIVSAVLLTKMDTFLTR 651

Query: 3538 EQYHQLLYASCLPPAVNSLQPGIFGQKVSVLNSDDEIQPIPPAIWKPKPLWTGKQVITAI 3359
            E+YHQLLYAS +PP   S Q   FGQKVSV  SD EIQP+PPAIWKP PLWTGKQVITAI
Sbjct: 652  EEYHQLLYASSVPPTSYS-QRNRFGQKVSVSWSDYEIQPLPPAIWKPTPLWTGKQVITAI 710

Query: 3358 LCHITRGRSPFTIEKDGRIPKEYFAKDSKEFSMHIYKNEFIHGIIDKAQFGKYGLVHIVH 3179
            L  +TRGR P TIEK GRI KEY  +D     +HI+ NE +HG+IDKAQFG YGLVH VH
Sbjct: 711  LNFVTRGRLPLTIEKRGRIQKEYIGEDHTLLVLHIHNNELVHGMIDKAQFGTYGLVHAVH 770

Query: 3178 ELYGADTAGSLLSIFSRLFTTFLQMHAFTCGVDDLLLLQEADMGREVMLEKSEAQSGDVH 2999
            ELYG D AG+LLS+FSRLFT+FLQ+H FTCGVDDLLL Q++D+ RE +L+KSE QSG+VH
Sbjct: 771  ELYGPDVAGTLLSVFSRLFTSFLQIHGFTCGVDDLLLSQKSDIERERILKKSEIQSGEVH 830

Query: 2998 FRFTGTKRGDIDPLDLCREIEKVVRSNGESATARLDRMMSNSLNVLTSEVNKALFPAGLQ 2819
             RFT TK GD DP+ L REIEKV+R NG+SATA LDRMMSNSLN LTSE+N+ LFP GL 
Sbjct: 831  MRFTRTKDGDGDPMKLQREIEKVLRGNGDSATALLDRMMSNSLNSLTSEINQTLFPNGLL 890

Query: 2818 KPFPRNCLSLMTTTGAKGGLVNLTQISSLLGQQELEGKRVPRMISGKTLPSFPPWDTSCR 2639
            KPF +NCLSLMTTTGAKGGLVN+TQISSLLGQQELEGKRVPRM+SGKTLP FPPWD S R
Sbjct: 891  KPFLKNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRVPRMVSGKTLPCFPPWDISSR 950

Query: 2638 AGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLIKNLESLKVCYDYT 2459
            AGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRC+IKNLE LKV YD+T
Sbjct: 951  AGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCIIKNLECLKVSYDHT 1010

Query: 2458 VRDADGSVVQFAYGEDGVDVLKTSYITEVQVLSNNQRVVLESLSCQLEDAHLSKSNSFIK 2279
            VRDADGSV+QF YGEDG+DVLK S+I+E ++L +NQ+VVL+  S Q+ D  L+KSN++I+
Sbjct: 1011 VRDADGSVIQFIYGEDGIDVLKASHISEFKMLLDNQKVVLQKFSDQISDTSLAKSNAYIR 1070

Query: 2278 ELPDSLRERATNLSRQLSKSGSRHQIXXXXXXXXXXXXXXXXLAEPGEPVGVIAAQSVGE 2099
            ELP SLR++AT+   +  KS   HQI                LAEPGE VGV+AAQSVGE
Sbjct: 1071 ELPCSLRDKATDFILKNQKS-FPHQINQKDFMKLMKLKYLSSLAEPGEAVGVVAAQSVGE 1129

Query: 2098 PSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMSAKEAIRTPIMTCPLLDGMTKEDGERFA 1919
            PSTQMTLNTFHLAG+G+MNVTLGIPRLQEILM+A + IRTP+M CPL    TK+D ER A
Sbjct: 1130 PSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKDIRTPLMNCPLHVWKTKDDAERLA 1189

Query: 1918 AKLRRICVADIVESMEVSTVPFYIHKRRVSTLYKLKMKLYPCGLYPPHIDISLEDCRAIL 1739
            AKLRR+ +AD+VE MEV TVPF IH  ++ST+YKLKM LYP  LYP   +++LEDC+ +L
Sbjct: 1190 AKLRRVSLADVVERMEVCTVPFSIHGNQISTIYKLKMTLYPSELYPAFSELTLEDCKEVL 1249

Query: 1738 RTTFISAMEDAIKKHLDLISRISGIEVVSGKGDNSXXXXXXXXXGSKSXXXXXXXXXXXX 1559
             TTF+ AMEDAI KHLD+I RIS I+V SGK DN                          
Sbjct: 1250 ETTFVEAMEDAIAKHLDMIFRISDIKVASGKEDNDFEEGVDEDESRNK--------SNTV 1301

Query: 1558 XXXXXXXXXXXXXXXXXXXXAEKRKKQTCDELEYEDGMEKQTSVSVDEHDGVSSSGFESE 1379
                                + +RK+Q  DE+EY+DG+EK++ V+  EHD    SGFESE
Sbjct: 1302 EENVDGGDEDYESLDDQGTDSRRRKQQANDEVEYDDGIEKESFVAAGEHDEEMQSGFESE 1361

Query: 1378 VDQAEAEEDYEIGGDDP-----VTVAEEKMPEDDLGVVADEESPD------NPVPXXXXX 1232
            +D  EA+EDY +GG  P     +   E     D   V  D +                  
Sbjct: 1362 IDHVEADEDYLMGGGSPGFDMDIATPESPSKADSTPVSEDGKKKSKLTEKGKKETKSKAD 1421

Query: 1231 XXXXXXXXXXKEVDYAIFVEAKGLNFEAHFALSGEHHILLAEIAQKTARRVYVKESKNID 1052
                      K++   I++ A+GL FE H+    E  ILLAEIAQ+TA+RVYVKE KNI+
Sbjct: 1422 KKAKKPKSSKKKIRRTIYMMAEGLKFEVHYIFRSEPRILLAEIAQRTAKRVYVKEYKNIE 1481

Query: 1051 RCSVVEPKRSTDRIALQTAGVNFLAFWDLQDDLDINRVVTNDIHAMLNTYGVEAARATII 872
            RCS+ E K+STD   LQ AGVNF   WDL++ LDI  + +NDIHAMLNTYGVEAARATII
Sbjct: 1482 RCSLKENKKSTDPFMLQIAGVNFSTLWDLEEFLDIIHIYSNDIHAMLNTYGVEAARATII 1541

Query: 871  NEVKAVFEPYGIRVNTRHLSLIADFMSAHGGYRPMNRIGMMEFNTSPFSKMTFETATRFI 692
             EV  VF  YGI+VN RHLSLIADFM+ HGGYRPMNR+GM +FNTSPF KMTFETAT+FI
Sbjct: 1542 KEVTDVFGLYGIQVNIRHLSLIADFMTFHGGYRPMNRVGMGDFNTSPFGKMTFETATKFI 1601

Query: 691  VEAAFHGESDVLQSPSASVCLGQPVKFGTGTFGLLQKL 578
            +E+AFHGE D L+SPSASV LGQPVK GTG F L+Q L
Sbjct: 1602 IESAFHGEVDTLESPSASVSLGQPVKMGTGCFDLMQNL 1639


>ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nelumbo
            nucifera]
          Length = 1676

 Score = 1810 bits (4687), Expect = 0.0
 Identities = 954/1691 (56%), Positives = 1188/1691 (70%), Gaps = 42/1691 (2%)
 Frame = -3

Query: 5524 MAVANEAPSEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINE 5345
            MA   E  +E V+A++FSF + E+++ +S KKIT+P + D    P+P GLYDPALGP+++
Sbjct: 1    MAHVTEGATEHVEAVRFSFLTDEEVRNLSFKKITNPTIFDNVERPLPGGLYDPALGPLDD 60

Query: 5344 TDSCKTCGLLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQY 5165
               C++CG  ++ CPGHCGHIDLV P+YNPLLF IL  LLQ  CF CH+F+  E++V++Y
Sbjct: 61   RTPCQSCGQRSFHCPGHCGHIDLVLPVYNPLLFKILFALLQRVCFFCHKFKAKEEQVQKY 120

Query: 5164 VAKLEHIARGDVVAAKKTETSLLAEAFSEDEDN------------GKDIKEK-NAGVASC 5024
             ++LE I +GDV  AK  E+ L +E+   D+                D+  K +  + S 
Sbjct: 121  ASQLELIIKGDVAGAKNLESVLASESSFPDKHELTHKTSESSSLEENDLTHKTDTAIHSV 180

Query: 5023 ELETDSKDAKQKTWTSLQYAEAVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLSKTTK 4844
            +   +    ++  WTSLQY EA+SVL   MK++H +C NCG  +P I+ PTFGW      
Sbjct: 181  DQNCNPMHLQEHHWTSLQYKEAMSVLGDFMKDKHSRCQNCGAKSPSITCPTFGWFHMNMS 240

Query: 4843 DSDIRADFIRGSDVG---------LSSTAEDKSAD---ANGDGT-------SQSEEELLA 4721
            ++DIRA+ +RG  +           S TAE ++ D   A GD         + S+  L  
Sbjct: 241  NADIRANVLRGCKLSDTFVHGAAQRSHTAEAENVDDVLARGDDADILESSGAVSDGTLEF 300

Query: 4720 PTNVSEQL-RNLPPDFFKRLYSSAGQKHLLPSEAQLILEGLWRNEAQLCSLICDIQQNNL 4544
             T   +++  ++PPDFF +    +G   LLP E +  +  LW+NEA+LCSLICDIQ   L
Sbjct: 301  VTETDKKIGEHIPPDFFSQRKFLSGP--LLPPEVKETMRLLWKNEARLCSLICDIQHERL 358

Query: 4543 NVTGKNKAYAMFFLKVLLVPPSKFRPCAFGGRQVVEHPQNLLLSKVQESNIALQELITSD 4364
            +V+G N  ++MFF + LLVPP KFRP A  G  V+EHPQ +LL KV +SNIAL     + 
Sbjct: 359  HVSGMNARHSMFFTEALLVPPIKFRPPAKSGDSVMEHPQTVLLGKVLQSNIALGNAHANS 418

Query: 4363 PDHPNTIRRWMDLQRSVTVLFDSSKGLAKSEKDTNGIRQLLEKKAGILRQKMMGKRVNFA 4184
             D    I RWMDLQ++V +L+DS K   + +    GI QLLEKK GI RQKMMGKRVN+A
Sbjct: 419  SDRSKIIPRWMDLQQTVNILYDS-KTSGQRDNTATGICQLLEKKEGIFRQKMMGKRVNYA 477

Query: 4183 CRSVISPDPYLAVNEIGIPPYFALKLTYPERVTPWNVNKLRHAVINGADIHPGASHYMDK 4004
            CRSVISPDPYLAVNEIGIPPYFAL+LTYPERVTPWNVNKLR A+INGA+ HPGA+HY+DK
Sbjct: 478  CRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEHHPGATHYVDK 537

Query: 4003 DRLYKLQVSRSMRNAIGRKLPTSRGVTSQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPT 3824
                KL  SR MR +I RKLP+SRG  +Q GK  EY+FEGKVVYRHLQDGDIVLVNRQPT
Sbjct: 538  LATVKLPPSRKMRMSISRKLPSSRGAVTQPGKNLEYEFEGKVVYRHLQDGDIVLVNRQPT 597

Query: 3823 LHKPSMMAHVVRVLNGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAMNIVNAN 3644
            LHKPS+MAHVVRVL GEKT+RMHYANCSTYNADFDGDEMNVHFPQDEISRAEA NIVNAN
Sbjct: 598  LHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNAN 657

Query: 3643 KQYIVPTSGDPIRGLIQDHIVSAVLLSKQDTFLTREQYHQLLYASCLPPAVNSLQPGIFG 3464
            KQY+VPTSG PIRGLIQDHI+SAVLL+K+DTFLTR+++ QLLY+S +         G  G
Sbjct: 658  KQYVVPTSGQPIRGLIQDHIISAVLLTKRDTFLTRDEFSQLLYSSGVSATALGYFVGKPG 717

Query: 3463 QKVSVLNSDDEIQPIPPAIWKPKPLWTGKQVITAILCHITRGRSPFTIEKDGRIPKEYFA 3284
            QK+S +NS++E++P+ PAIWKP+PLWTGKQVITA+L HITRGR+PF++ K G+ P+EYF 
Sbjct: 718  QKISTINSEEELEPVLPAIWKPEPLWTGKQVITAVLNHITRGRTPFSVRKAGKTPEEYFG 777

Query: 3283 KDSKEFSMHIYKNEFIHGIIDKAQFGKYGLVHIVHELYGADTAGSLLSIFSRLFTTFLQM 3104
            K S E+ + I+KNE +HG+IDKAQFG YGLVH V ELYG++ AG LLS+ SRLFT FLQM
Sbjct: 778  KTSGEYELLIHKNELVHGVIDKAQFGGYGLVHTVQELYGSNAAGVLLSVLSRLFTIFLQM 837

Query: 3103 HAFTCGVDDLLLLQEADMGREVMLEKSEAQSGDVHFRFTGTKRGDIDPLDLCREIEKVVR 2924
            H FTCG+DDLL++   D+ R   L+K+E      H++F G   GD DP+ L  EIEK +R
Sbjct: 838  HGFTCGIDDLLIVHRYDLERMKKLDKNEQIGEFEHWQFVGCADGDKDPIKLQVEIEKAIR 897

Query: 2923 SNGESATARLDRMMSNSLNVLTSEVNKALFPAGLQKPFPRNCLSLMTTTGAKGGLVNLTQ 2744
             NG+SA  RLDR MS ++N LTSEVNK LFP GL KPFP+NCLSLMT TGAKGG+VN TQ
Sbjct: 898  RNGDSAVTRLDRRMSGAMNKLTSEVNKNLFPEGLCKPFPKNCLSLMTATGAKGGMVNSTQ 957

Query: 2743 ISSLLGQQELEGKRVPRMISGKTLPSFPPWDTSCRAGGFISDRFLTGLRPQEYYFHCMAG 2564
            I SLLGQQELEGKRVPRM+SGKTLP FPPWD + RAGGFISDRFLTGLRPQEYYFHCMAG
Sbjct: 958  ICSLLGQQELEGKRVPRMVSGKTLPCFPPWDPASRAGGFISDRFLTGLRPQEYYFHCMAG 1017

Query: 2563 RDGLVDTAIKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSVVQFAYGEDGVDVLKTSY 2384
            R+GLVDTA+KTSRSGYLQRCL+KNLE LKVCYDYTVRDADGSVVQF YGEDG+DV KTS+
Sbjct: 1018 REGLVDTAVKTSRSGYLQRCLVKNLEGLKVCYDYTVRDADGSVVQFIYGEDGIDVHKTSF 1077

Query: 2383 ITEVQVLSNNQRVVLESLSCQLEDAHLSKSNSFIKELPDSLRERATNLSRQLSKS--GSR 2210
            + E + L+ N R+V E  + QL+   L K + +IK+LP +L  +A +    LSK    S 
Sbjct: 1078 LEEFEALAANHRIVQERFNNQLDSEVLFKYD-YIKKLPVALEGKAKDYIDTLSKKKLKSL 1136

Query: 2209 HQIXXXXXXXXXXXXXXXXLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLG 2030
            +                  LA+PGEPVGV+AAQSVGEPSTQMTLNTFH AGRGEMNVTLG
Sbjct: 1137 NLRKRKDFMKLMRSKYISSLAQPGEPVGVVAAQSVGEPSTQMTLNTFHHAGRGEMNVTLG 1196

Query: 2029 IPRLQEILMSAKEAIRTPIMTCPLLDGMTKEDGERFAAKLRRICVADIVESMEVSTVPFY 1850
            IPRLQEILM A E I+TP+MTCPL  G T++D +R AAKL+++ VAD++ESMEV  VPF 
Sbjct: 1197 IPRLQEILMRASEKIQTPVMTCPLRKGKTEDDAKRLAAKLQKVTVADVIESMEVGVVPFS 1256

Query: 1849 IHKRRVSTLYKLKMKLYPCGLYPPHIDISLEDCRAILRTTFISAMEDAIKKHLDLISRIS 1670
            + K +VST+YKLK+KLYP  LYPP+  I+L+DC+A L+  F+  MEDAI+ HL ++S+I 
Sbjct: 1257 VKKHQVSTVYKLKLKLYPPELYPPYSGITLKDCQATLKFVFVGEMEDAIQSHLLMLSKIR 1316

Query: 1669 GI-EVVSGKGDNSXXXXXXXXXGSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAE 1493
            GI  VV     NS          SKS                                A+
Sbjct: 1317 GITNVVHSTQSNSGDGADEDGPTSKS--------QAAEENDDAGDDDDYEAPDDLGADAQ 1368

Query: 1492 KRKKQTCDELEYEDGMEKQ-TSVSVDEHDGVSSSGFESEVDQAEAEEDYEIGGDDPVTVA 1316
            KRK+Q  DE++YED ME +  +      D  +S+GFESE+DQAE E    + G+  V  A
Sbjct: 1369 KRKRQATDEMDYEDDMENEIVNTENGRSDIEASAGFESEIDQAEVEAGNIMDGEIQVFDA 1428

Query: 1315 EEKMPE--DDLGVVADEESPDNPVPXXXXXXXXXXXXXXXKEVDYAIFVEAKGLNFEAHF 1142
            E++  +     G V+  +S                     K+ D A F+ A+GL+FE HF
Sbjct: 1429 EDEASQTPSQHGTVSKSKSSGG----KDEADARGMTRRTKKDSDRAFFMVAEGLDFEVHF 1484

Query: 1141 ALSGEHHILLAEIAQKTARRVYVKESKNIDRCSVVEPKRS---TDRIALQTAGVNFLAFW 971
              + E HILLA+IAQKTA+ VYVK S NI+ CSVV PK++    +   LQT+GV+F  FW
Sbjct: 1485 RFTNEPHILLAQIAQKTAKNVYVKRSGNIELCSVVVPKKADGEPEIPELQTSGVDFPTFW 1544

Query: 970  DLQDDLDINRVVTNDIHAMLNTYGVEAARATIINEVKAVFEPYGIRVNTRHLSLIADFMS 791
            ++QDDLDI R+ +NDIHA+LNTYGVEAARATII +V  VF+ YGI VN RHLSLIADFM+
Sbjct: 1545 NMQDDLDIRRLKSNDIHAVLNTYGVEAARATIIEQVNQVFKSYGIAVNIRHLSLIADFMT 1604

Query: 790  AHGGYRPMNRIGMMEFNTSPFSKMTFETATRFIVEAAFHGESDVLQSPSASVCLGQPVKF 611
              GGYRPM+R G+ E   SPFSKM++ETA+RF++EAA+HGE D L+SPSA +CLG PVK 
Sbjct: 1605 QTGGYRPMSRFGIAE-TISPFSKMSYETASRFVIEAAYHGEMDNLESPSARICLGLPVKM 1663

Query: 610  GTGTFGLLQKL 578
            GTG F L+QK+
Sbjct: 1664 GTGCFDLMQKI 1674


>ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Vitis
            vinifera]
          Length = 1691

 Score = 1735 bits (4494), Expect = 0.0
 Identities = 935/1719 (54%), Positives = 1160/1719 (67%), Gaps = 70/1719 (4%)
 Frame = -3

Query: 5524 MAVANEAPSEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINE 5345
            MA   E  +E V+A+KFSF++ E+++K S KKITSP +LD    PVP GLYDPALG I+E
Sbjct: 1    MAHVIEGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE 60

Query: 5344 TDSCKTCGLLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQY 5165
               C++CG  ++ CPGHCGHIDLV  +YNPLLF +L NLLQ TCF CH F+     V++Y
Sbjct: 61   NTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKY 120

Query: 5164 VAKLEHIARGDVVAAKKTETSLLAEAFSEDEDNGKDIKEKNAGVASCELETDSKDAKQKT 4985
            V++LE I++GDVV AK  ++   +E+   ++ +G  +   +  V S   +  S   KQ+ 
Sbjct: 121  VSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVSCSST-VNSSARDNCSVHLKQQE 179

Query: 4984 WTSLQYAEAVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLSKT-TKDSDIRADFIRGS 4808
            WTSLQ  EA+SV+   +K +H+ C NC   +P+++ PTFGW       D+  RA+ IRGS
Sbjct: 180  WTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGS 239

Query: 4807 DVG--LSSTAEDKSADAN---------GDGTSQSE-EELLAPTN-----VSEQLRN---- 4691
             +   LS  AE+KS+            GDG    E    +APT+     V+++L      
Sbjct: 240  KLERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKRLERKGAQ 299

Query: 4690 LPPDFFKRLYSSAGQKHLLPSEAQLILEGLWRNEAQLCSLICDIQQNNLNVTGKNKAYAM 4511
             P +F K+    +G   LLPSE + I+E LW NEA+LCS I DI Q  L  +G    Y+M
Sbjct: 300  APIEFIKQKSFFSGP--LLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSM 357

Query: 4510 FFLKVLLVPPSKFRPCAFGGRQVVEHPQNLLLSKVQESNIALQELITSDPDHPNTIRRWM 4331
            FFL+ +LVPP KFRP + G   V+EHPQ +LL KV ++NIAL     ++ +    I RWM
Sbjct: 358  FFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWM 417

Query: 4330 DLQRSVTVLFDSSKGLAKSEKDT-NGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPY 4154
            DLQ+S+ VLFD      + ++DT +GI QLLEKK G+ RQKMMGKRVNFACRSVISPDPY
Sbjct: 418  DLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPY 477

Query: 4153 LAVNEIGIPPYFALKLTYPERVTPWNVNKLRHAVINGADIHPGASHYMDKDRLYKLQVSR 3974
            LAVNEIGIPPYFAL+LTYPE+VTPWNV KLR A+ING +IHPGA+HY+DK    KL V++
Sbjct: 478  LAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNK 537

Query: 3973 SMRNAIGRKLPTSRGVTSQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHV 3794
             MR +I RKLP+SRGV +Q G+  + +FEGK+VYRHLQDGDIVLVNRQPTLHKPS+MAHV
Sbjct: 538  KMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHV 597

Query: 3793 VRVLNGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAMNIVNANKQYIVPTSGD 3614
            VRVL GEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEA NIVNAN QYIVP+ GD
Sbjct: 598  VRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGD 657

Query: 3613 PIRGLIQDHIVSAVLLSKQDTFLTREQYHQLLYASCLPPAVNSLQPGIFGQKVSVLNSDD 3434
            PIRGLIQDHIVSAVLL+K+DTFLTREQY+QLLY+S L     S   G  G+KVSVL+S+D
Sbjct: 658  PIRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGLSSGSGSFI-GKPGKKVSVLDSED 716

Query: 3433 EIQPIPPAIWKPKPLWTGKQVITAILCHITRGRSPFTIEKDGRIPKEYFA---------- 3284
            E+QP+ PAIWKP+PLW+GKQVITA+L HITRGR PFT EKDG+IP+EYF           
Sbjct: 717  EMQPLLPAIWKPEPLWSGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKKSGK 776

Query: 3283 ---------------KDSKEFSMHIYKNEFIHGIIDKAQFGKYGLVHIVHELYGADTAGS 3149
                           K   E+ + I+KNE + G+IDKAQF KYGLVH+V ELYG++TAG 
Sbjct: 777  GKDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGI 836

Query: 3148 LLSIFSRLFTTFLQMHAFTCGVDDLLLLQEADMGREVMLEKSEAQSGDVHFRFTGTKRGD 2969
            LLS+ SRLFT FLQMH FTCGVDDLL+    D+ R++ L+KSE     VH +F G+  G 
Sbjct: 837  LLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGK 896

Query: 2968 IDPLDLCREIEKVVRSNGESATARLDRMMSNSLNVLTSEVNKALFPAGLQKPFPRNCLSL 2789
            IDP+ L  E+EK++ SNGE+A  RLDRMM N LN LTS+VNK L   GL KPFP+NCLSL
Sbjct: 897  IDPVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSL 956

Query: 2788 MTTTGAKGGLVNLTQISSLLGQQELEGKRVPRMISGKTLPSFPPWDTSCRAGGFISDRFL 2609
            MTTTGAKG  VN +QISS LGQQ+LEGKRVPRM+SGKTLP FPPWD + RAGGFISDRFL
Sbjct: 957  MTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFL 1016

Query: 2608 TGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSVVQ 2429
            TGL PQEYYFHCMAGR+GLVDTA+KTSRSGYLQRCLIKNLE LKVCYDYTVRD+DGS+VQ
Sbjct: 1017 TGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQ 1076

Query: 2428 FAYGEDGVDVLKTSYITEVQVLSNNQRVVLESLSCQLEDAHLSKSNSFIKELPDSLRERA 2249
            F YG+DGVDV +TS+ITE + L+ N+ VV E            K N +I++LP  LR++ 
Sbjct: 1077 FNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQD------GKFNGYIQKLPKELRKKT 1130

Query: 2248 TNLSRQL--SKSGSRHQIXXXXXXXXXXXXXXXXLAEPGEPVGVIAAQSVGEPSTQMTLN 2075
                      +    +                  LA+PGEPVGV+AAQSVGEPSTQMTLN
Sbjct: 1131 KKFIEGFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLN 1190

Query: 2074 TFHLAGRGEMNVTLGIPRLQEILMSAKEAIRTPIMTCPLLDGMTKEDGERFAAKLRRICV 1895
            TFHLAGRGE+NVTLGIPRLQEILM+A   I+TPIMTCPL  G +K+D ER AAKL+++ V
Sbjct: 1191 TFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTV 1250

Query: 1894 ADIVESMEVSTVPFYIHKRRVSTLYKLKMKLYPCGLYPPHIDISLEDCRAILRTTFISAM 1715
            ADI ESMEVS VPF +   +  ++YKLKMKLY   LYPPH  ISLEDC   L   F+  +
Sbjct: 1251 ADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVREL 1310

Query: 1714 EDAIKKHLDLISRISGIEVVSGKGDNSXXXXXXXXXGSKSXXXXXXXXXXXXXXXXXXXX 1535
            EDAI+ HL L+S+ISGI+        +           ++                    
Sbjct: 1311 EDAIQNHLLLLSKISGIK--------NFLPDSRSMASKETDEDASGDGLAGGNGDEDDDG 1362

Query: 1534 XXXXXXXXXXXXAEKRKKQTCDELEYEDGMEKQTSVSVDEHDGVSSSGFESEVDQAEAEE 1355
                        A+KRK+Q  DE++Y D          +  +G  S+G   E+D    E+
Sbjct: 1363 EDDGGAEDLGLDAQKRKQQASDEMDYGDS-------EGEPDEGEPSAGLTEEIDL--VED 1413

Query: 1354 DYEIGGDDPVTVAEEKMPEDDLGVVADEESPDNPVPXXXXXXXXXXXXXXXKEVDYAIFV 1175
            + EI  ++ V +++   P+D+   V  +                       K+ D AI V
Sbjct: 1414 EVEISNNEEVGISD---PKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILV 1470

Query: 1174 EAKGLNFEAHFALSGEHHILLAEIAQKTARRVYVKESKNIDRCSVV------------EP 1031
            +AKG  FE HF  + E HILLA+IAQK A +VY++ S  ID C V+            +P
Sbjct: 1471 KAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDP 1530

Query: 1030 KRSTD--------RIALQTAGVNFLAFWDLQDDLDINRVVTNDIHAMLNTYGVEAARATI 875
            K+  +          ALQTAGV+F AFW +QD+LD+  V +N++HAMLNT+GVEAARATI
Sbjct: 1531 KKRENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATI 1590

Query: 874  INEVKAVFEPYGIRVNTRHLSLIADFMSAHGGYRPMNRIGMMEFNTSPFSKMTFETATRF 695
            I EV  VF  YG++VN RHLSLIADFM+  GGYRPMNR G +  + SPFSKMTFETA++F
Sbjct: 1591 IKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKF 1650

Query: 694  IVEAAFHGESDVLQSPSASVCLGQPVKFGTGTFGLLQKL 578
            IVEAA HG +D L+S SA +CLG PVK GTG F L+QK+
Sbjct: 1651 IVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKI 1689


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 1729 bits (4478), Expect = 0.0
 Identities = 927/1702 (54%), Positives = 1148/1702 (67%), Gaps = 53/1702 (3%)
 Frame = -3

Query: 5524 MAVANEAPSEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINE 5345
            MA   E  +E V+A+KFSF++ E+++K S KKITSP +LD    PVP GLYDPALG I+E
Sbjct: 1    MAHVIEGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE 60

Query: 5344 TDSCKTCGLLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQY 5165
               C++CG  ++ CPGHCGHIDLV  +YNPLLF +L NLLQ TCF CH F+     V++Y
Sbjct: 61   NTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKY 120

Query: 5164 VAKLEHIARGDVVAAKKTETSLLAEAFSEDEDNGKDIKEKNAGVASCELETDSKDAKQKT 4985
            V++LE I++GDVV AK  ++   +E+   ++ +G  +   +  V S   +  S   KQ+ 
Sbjct: 121  VSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVSCSST-VNSSARDNCSVHLKQQE 179

Query: 4984 WTSLQYAEAVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLSKT-TKDSDIRADFIRGS 4808
            WTSLQ  EA+SV+   +K +H+ C NC   +P+++ PTFGW       D+  RA+ IRGS
Sbjct: 180  WTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGS 239

Query: 4807 DVGLS----STAEDKSADANGDGTSQSEEELLAPTNVSEQLRNLPPDFFKRLYSSAGQKH 4640
             +        T E  S+ A  DG   +  + L            P +F K+    +G   
Sbjct: 240  KLERPLNGVDTDETHSSIAPTDGIQDTVTKRLERKGAQA-----PIEFIKQKSFFSGP-- 292

Query: 4639 LLPSEAQLILEGLWRNEAQLCSLICDIQQNNLNVTGKNKAYAMFFLKVLLVPPSKFRPCA 4460
            LLPSE + I+E LW NEA+LCS I DI Q  L  +G    Y+MFFL+ +LVPP KFRP +
Sbjct: 293  LLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPS 352

Query: 4459 FGGRQVVEHPQNLLLSKVQESNIALQELITSDPDHPNTIRRWMDLQRSVTVLFDSSKGLA 4280
             G   V+EHPQ +LL KV ++NIAL     ++ +    I RWMDLQ+S+ VLFD      
Sbjct: 353  KGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAG 412

Query: 4279 KSEKDT-NGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALKLT 4103
            + ++DT +GI QLLEKK G+ RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAL+LT
Sbjct: 413  QGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLT 472

Query: 4102 YPERVTPWNVNKLRHAVINGADIHPGASHYMDKDRLYKLQVSRSMRNAIGRKLPTSRGVT 3923
            YPE+VTPWNV KLR A+ING +IHPGA+HY+DK    KL V++ MR +I RKLP+SRGV 
Sbjct: 473  YPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVV 532

Query: 3922 SQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGEKTLRMHYANC 3743
            +Q G+  + +FEGK+VYRHLQDGDIVLVNRQPTLHKPS+MAHVVRVL GEKTLRMHYANC
Sbjct: 533  AQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANC 592

Query: 3742 STYNADFDGDEMNVHFPQDEISRAEAMNIVNANKQYIVPTSGDPIRGLIQDHIVSAVLLS 3563
            STYNADFDGDEMNVHFPQDEISRAEA NIVNAN QYIVP+ GDPIRGLIQDHIVSAVLL+
Sbjct: 593  STYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSAVLLT 652

Query: 3562 KQDTFLTREQYHQLLYASCLPPAVNSLQPGIFGQKVSVLNSDDEIQPIPPAIWKPKPLWT 3383
            K+DTFLTREQY+QLLY+S L     S   G  G+KVSVL+S+DE+QP+ PAIWKP+PLW+
Sbjct: 653  KKDTFLTREQYNQLLYSSGLSSGSGSFI-GKPGKKVSVLDSEDEMQPLLPAIWKPEPLWS 711

Query: 3382 GKQVITAILCHITRGRSPFTIEKDGRIPKEYFA-------------------------KD 3278
            GKQVITA+L HITRGR PFT EKDG+IP+EYF                          K 
Sbjct: 712  GKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKEKRIEKK 771

Query: 3277 SKEFSMHIYKNEFIHGIIDKAQFGKYGLVHIVHELYGADTAGSLLSIFSRLFTTFLQMHA 3098
              E+ + I+KNE + G+IDKAQF KYGLVH+V ELYG++TAG LLS+ SRLFT FLQMH 
Sbjct: 772  HGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTVFLQMHG 831

Query: 3097 FTCGVDDLLLLQEADMGREVMLEKSEAQSGDVHFRFTGTKRGDIDPLDLCREIEKVVRSN 2918
            FTCGVDDLL+    D+ R++ L+KSE     VH +F G+  G IDP+ L  E+EK++ SN
Sbjct: 832  FTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVEKIILSN 891

Query: 2917 GESATARLDRMMSNSLNVLTSEVNKALFPAGLQKPFPRNCLSLMTTTGAKGGLVNLTQIS 2738
            GE+A  RLDRMM N LN LTS+VNK L   GL KPFP+NCLSLMTTTGAKG  VN +QIS
Sbjct: 892  GEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQIS 951

Query: 2737 SLLGQQELEGKRVPRMISGKTLPSFPPWDTSCRAGGFISDRFLTGLRPQEYYFHCMAGRD 2558
            S LGQQ+LEGKRVPRM+SGKTLP FPPWD + RAGGFISDRFLTGL PQEYYFHCMAGR+
Sbjct: 952  SFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAGRE 1011

Query: 2557 GLVDTAIKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSVVQFAYGEDGVDVLKTSYIT 2378
            GLVDTA+KTSRSGYLQRCLIKNLE LKVCYDYTVRD+DGS+VQF YG+DGVDV +TS+IT
Sbjct: 1012 GLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSFIT 1071

Query: 2377 EVQVLSNNQRVVLESLSCQLEDAHLSKSNSFIKELPDSLRERATNLSRQL--SKSGSRHQ 2204
            E + L+ N+ VV E            K N +I++LP  LR++           +    + 
Sbjct: 1072 EFEALAVNEEVVCEKFGQD------GKFNGYIQKLPKELRKKTKKFIEGFMEERQDFDNM 1125

Query: 2203 IXXXXXXXXXXXXXXXXLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIP 2024
                             LA+PGEPVGV+AAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIP
Sbjct: 1126 KKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIP 1185

Query: 2023 RLQEILMSAKEAIRTPIMTCPLLDGMTKEDGERFAAKLRRICVADIVESMEVSTVPFYIH 1844
            RLQEILM+A   I+TPIMTCPL  G +K+D ER AAKL+++ VADI ESMEVS VPF + 
Sbjct: 1186 RLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQ 1245

Query: 1843 KRRVSTLYKLKMKLYPCGLYPPHIDISLEDCRAILRTTFISAMEDAIKKHLDLISRISGI 1664
              +  ++YKLKMKLY   LYPPH  ISLEDC   L   F+  +EDAI+ HL L+S+ISGI
Sbjct: 1246 DHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGI 1305

Query: 1663 EVVSGKGDNSXXXXXXXXXGSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEKRK 1484
            +        +           ++                                A+KRK
Sbjct: 1306 K--------NFLPDSRSMASKETDEDASGDGLAGGNGDEDDDGEDDGGAEDLGLDAQKRK 1357

Query: 1483 KQTCDELEYEDGMEKQTSVSVDEHDGVSSSGFESEVDQAEAEEDYEIGGDDPVTVAEEKM 1304
            +Q  DE++Y D          +  +G  S+G   E+D    E++ EI  ++ V +++   
Sbjct: 1358 QQASDEMDYGDS-------EGEPDEGEPSAGLTEEIDL--VEDEVEISNNEEVGISD--- 1405

Query: 1303 PEDDLGVVADEESPDNPVPXXXXXXXXXXXXXXXKEVDYAIFVEAKGLNFEAHFALSGEH 1124
            P+D+   V  +                       K+ D AI V+AKG  FE HF  + E 
Sbjct: 1406 PKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNEP 1465

Query: 1123 HILLAEIAQKTARRVYVKESKNIDRCSVV------------EPKRSTD--------RIAL 1004
            HILLA+IAQK A +VY++ S  ID C V+            +PK+  +          AL
Sbjct: 1466 HILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKKRENIPGEEKKKLPAL 1525

Query: 1003 QTAGVNFLAFWDLQDDLDINRVVTNDIHAMLNTYGVEAARATIINEVKAVFEPYGIRVNT 824
            QTAGV+F AFW +QD+LD+  V +N++HAMLNT+GVEAARATII EV  VF  YG++VN 
Sbjct: 1526 QTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVNI 1585

Query: 823  RHLSLIADFMSAHGGYRPMNRIGMMEFNTSPFSKMTFETATRFIVEAAFHGESDVLQSPS 644
            RHLSLIADFM+  GGYRPMNR G +  + SPFSKMTFETA++FIVEAA HG +D L+S S
Sbjct: 1586 RHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESAS 1645

Query: 643  ASVCLGQPVKFGTGTFGLLQKL 578
            A +CLG PVK GTG F L+QK+
Sbjct: 1646 ARICLGLPVKMGTGCFDLMQKI 1667


>ref|XP_010238655.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Brachypodium
            distachyon]
          Length = 1634

 Score = 1667 bits (4318), Expect = 0.0
 Identities = 905/1676 (53%), Positives = 1137/1676 (67%), Gaps = 34/1676 (2%)
 Frame = -3

Query: 5509 EAPSEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINETDSCK 5330
            +APS  V++I F FYS E+IK++SV +IT  D LD K  PVP GL D A+GPIN TD+C 
Sbjct: 3    QAPSVEVESILFGFYSEEEIKRVSVTRITKADRLDAKNCPVPGGLLDLAMGPINATDTCN 62

Query: 5329 TCGLLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQYVAKLE 5150
            TCG L+  CPGH GHI+L KPL+NPLLF  L++LL+ TCF CHRFR   ++V++Y  +LE
Sbjct: 63   TCGQLSGLCPGHFGHIELSKPLFNPLLFGTLRDLLRSTCFSCHRFRLHSEQVRRYTRELE 122

Query: 5149 HIARGDVVAAKKTETSLLAEAFSE-DEDNGKDIKEKNAGVASCELETDSKDAKQKTWTSL 4973
             +ARGDV  AK  + S +AE   E DED+  D             ++   D + KTWTS+
Sbjct: 123  LVARGDVARAKNLQDSGVAEEDVEMDEDSSVD-------------QSSPSDRENKTWTSI 169

Query: 4972 QYAEAVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLS-KTTKDSDIRADFIRGSDVGL 4796
            Q  EA +++  ++K + KKCANC   +PK++   FGWL  + TK S +R   I  +D  L
Sbjct: 170  QLKEAHAIIFKLLKKQVKKCANCDMRSPKVTCQIFGWLKIQDTKGSSVRRKAI--TDFNL 227

Query: 4795 SSTAEDKSADANGDGTSQSEEELLAPTNVSEQLRNLPPDFFKRLYSSAGQKHLLPSEAQL 4616
                +    D++ +G S   ++++  +  S Q+  L  D  K +        LL +E + 
Sbjct: 228  EG--DSHRHDSSENGVSGLSDDIIKGS--SNQITGLSDDRIKEI-------PLLATEVES 276

Query: 4615 ILEGLWRNEAQLCSLICDIQQNNLNVTGKNKAYAMFFLKVLLVPPSKFRPCAFGGRQVVE 4436
            IL+ LW NEA+ C L+CD QQN L+V+ K + Y MFFLK LLV P++FRP       ++E
Sbjct: 277  ILKDLWENEARFCMLLCDFQQN-LSVSEKRRGYEMFFLKSLLVTPNRFRPSTSSSLGIME 335

Query: 4435 HPQNLLLSKVQESNIALQELITSDPDHPNTIRRWMDLQRSVTVLFDSSKGLAKSEKDTNG 4256
            HPQN+LL KVQE+N+A+Q    + P+H + I RW DLQ SV + +DSSKG    + D NG
Sbjct: 336  HPQNVLLGKVQEANLAVQH-DKAHPNHMDIITRWRDLQTSVNLFYDSSKGFGNGDGDGNG 394

Query: 4255 IRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALKLTYPERVTPWN 4076
            IRQLL+KK G++RQKMMGKRVN +CR+VISPDP+LAVNEIGIPP  ALK+TYPE V P N
Sbjct: 395  IRQLLDKKGGVIRQKMMGKRVNHSCRTVISPDPFLAVNEIGIPPQAALKMTYPENVMPCN 454

Query: 4075 VNKLRHAVINGADIHPGASHYMDKDRLYKLQVSRSMRNAIGRKLPTSRGVTSQSGKGPEY 3896
              KL+ A+ NG  IHPGA+HY     +YKLQ  RS R AI + LP SRG  SQ GK P+ 
Sbjct: 455  AKKLQEAINNGCGIHPGATHYKVNKNMYKLQDDRSKRRAIAKMLPASRGSISQPGKDPKC 514

Query: 3895 DFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGEKTLRMHYANCSTYNADFDG 3716
            +FE KVVYRHLQDGDIVLVNRQPTLHKPSMMAH VRVL GEKT+RMHYANCSTYNADFDG
Sbjct: 515  EFESKVVYRHLQDGDIVLVNRQPTLHKPSMMAHFVRVLPGEKTIRMHYANCSTYNADFDG 574

Query: 3715 DEMNVHFPQDEISRAEAMNIVNANKQYIVPTSGDPIRGLIQDHIVSAVLLSKQDTFLTRE 3536
            DEMNVHFPQDEISRAEAMNIV+ANKQYI P SGD +RGLIQDHIVSAVLL+K DTF++RE
Sbjct: 575  DEMNVHFPQDEISRAEAMNIVDANKQYIGPRSGDAVRGLIQDHIVSAVLLTKLDTFISRE 634

Query: 3535 QYHQLLYASCLPPAVNSLQPGIFGQKVSVLNSDDEIQPIPPAIWKPKPLWTGKQVITAIL 3356
            +Y QL+Y SC+    ++  P   G++VSV+   D ++ +PPAI KPKPLWTGKQVIT IL
Sbjct: 635  EYSQLVYGSCVS---STRSPCQSGKRVSVMKDGDILELLPPAILKPKPLWTGKQVITTIL 691

Query: 3355 CHITRGRSPFTIEKDGRIPKEYF-----------AKDSKEFSMHIYKNEFIHGIIDKAQF 3209
             H+T+G  PFT+EK G+IP +Y            AKDS++  ++I+ NE I G+IDK QF
Sbjct: 692  NHLTKGHPPFTVEKKGKIPVKYLIPKERHGDKDNAKDSEQV-LYIHDNELIKGMIDKDQF 750

Query: 3208 GKYGLVHIVHELYGADTAGSLLSIFSRLFTTFLQMHAFTCGVDDLLLLQEADMGREVMLE 3029
            G YG+VH V+ELYGA+TAG LLSIFSRLFT FLQ+H FTCG+DDLLL QE+D  R   L 
Sbjct: 751  GNYGIVHTVYELYGAETAGRLLSIFSRLFTLFLQLHGFTCGIDDLLLFQESDKQRTETLM 810

Query: 3028 KSEAQSGDVHFRFTGTKRGDIDPLDLCREIEKVVRSNGESATARLDRMMSNSLNVLTSEV 2849
             SE  S +VH +FT     D DPL L  E+EKVVR  GESAT  LD+MM ++LN L SEV
Sbjct: 811  TSEKCSEEVHRKFTCAGDYDEDPLKLQMEVEKVVRRIGESATDTLDKMMLSALNGLQSEV 870

Query: 2848 NKALFPAGLQKPFPRNCLSLMTTTGAKGGLVNLTQISSLLGQQELEGKRVPRMISGKTLP 2669
            N+ LFP GLQKPFPRNCL+LMT TGAKGG VN+TQI+SLLG Q+LEG RVPRMISGK+LP
Sbjct: 871  NRRLFPYGLQKPFPRNCLTLMTATGAKGGEVNMTQITSLLGSQDLEGARVPRMISGKSLP 930

Query: 2668 SFPPWDTSCRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLIKNL 2489
             FPPWDTS RAGGF+SDRFLTGLRPQEYYFHCMAGR+GL+DTA+KTSRSGYLQRCL+K+L
Sbjct: 931  CFPPWDTSSRAGGFVSDRFLTGLRPQEYYFHCMAGRNGLIDTAVKTSRSGYLQRCLVKSL 990

Query: 2488 ESLKVCYDYTVRDADGSVVQFAYGEDGVDVLKTSYITEVQ------VLSNNQRVVLESLS 2327
            ESL V YD+TVR+ DGS+VQF YGEDGVDV K++++ + Q       L++N++ VL+ L 
Sbjct: 991  ESLFVAYDHTVRNVDGSIVQFRYGEDGVDVHKSNFLDKFQDKDMFKELADNRKAVLDRLG 1050

Query: 2326 CQLEDAHLSKSNSFIKELPDSLRERATNLSRQLSKSGSRHQIXXXXXXXXXXXXXXXXLA 2147
                D H+S  +++I ELP++L +RAT    +  K   RH I                L 
Sbjct: 1051 RYTGD-HMSLQSNYITELPEALTDRATKFLSK-DKGRCRHDIKEDELMNLLKAKYLASLV 1108

Query: 2146 EPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMSAKEAIRTPIMT 1967
            +PGE VGVI AQS+GEPSTQMTLNTFH AGR ++NVTLG+PR+QEILM A   I TP+M 
Sbjct: 1109 DPGEAVGVILAQSLGEPSTQMTLNTFHFAGRSDVNVTLGMPRIQEILMKASANIATPVMM 1168

Query: 1966 CPLLDGMTKEDGERFAAKLRRICVADIVESMEVSTVPFYIHKRRVSTLYKLKMKLYPCGL 1787
            CPLL+ +T +D ER AAKLR + + DIVE +EV TVPFY +   VS+LYKL++KL+P   
Sbjct: 1169 CPLLEDVTWDDAERLAAKLRGVRLVDIVEGIEVCTVPFYNNNGYVSSLYKLQIKLFPPER 1228

Query: 1786 YPPHIDISLEDCRAILRTTFISAMEDAIKKHLDLISRISGIEVVSGKGDNSXXXXXXXXX 1607
            YPP  ++++++C+  LRT F+ +ME AI+KHL L+ R+SGI+    K   S         
Sbjct: 1229 YPPQSELTVDECQTALRTVFVDSMEFAIEKHLKLLYRVSGIQETRVKDTES--------- 1279

Query: 1606 GSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEKRKKQTCDELEY--------ED 1451
             S S                                 EKRK+Q  DE+EY        ED
Sbjct: 1280 -SLSEGPEESEGRPIDGEESGASDGDNENEDDLGTDGEKRKRQENDEMEYDGEDDVEKED 1338

Query: 1450 GM----EKQTSVSVDEHDGVSSSGFESEVDQAEAEEDYEIGGDDPVTVAEEKMPEDDLGV 1283
            GM    E++T   +D  D +  SG ESEV+    +E +     + V   E K+    L  
Sbjct: 1339 GMNSDPEEETKYELDNDDDLVESGGESEVN----DEGHVSDSSNKVGKLEGKLAAGKL-- 1392

Query: 1282 VADEESPDNPVPXXXXXXXXXXXXXXXKEVDYAIFVEAKGLNFEAHF-ALSGEHHILLAE 1106
                +   N                   ++   + VE+ GLNFE H+  L  E HILL++
Sbjct: 1393 ----KKEVNKTVENLEEQKQAQKGVKRTKLSRTVHVESTGLNFEVHYLLLHNEPHILLSQ 1448

Query: 1105 IAQKTARRVYVKESKN--IDRCSVVEPKRSTDRIALQTAGVNFLAFWDLQDDLDINRVVT 932
            IAQKT R ++VK S N  ID+C VV P++  D   L+TAGVNF  FW LQD LDI +V +
Sbjct: 1449 IAQKTLRSLFVKGSHNNKIDQCKVVWPEKKGDFRGLKTAGVNFDVFWGLQDYLDICKVAS 1508

Query: 931  NDIHAMLNTYGVEAARATIINEVKAVFEPYGIRVNTRHLSLIADFMSAHGGYRPMNRIGM 752
            NDIHA+L TYGVEAARATII EVKAVFEP+GI VN RHLSL+A+FM++ G YR M+ +GM
Sbjct: 1509 NDIHAILRTYGVEAARATIIKEVKAVFEPFGINVNRRHLSLVAEFMTSGGDYRAMSSMGM 1568

Query: 751  MEFNTSPFSKMTFETATRFIVEAAFHGESDVLQSPSASVCLGQPVKFGTGTFGLLQ 584
             +F TSPF KMTFE ATRFI EAAF+GE+D L  PSA++ LG+P K GTG FGLLQ
Sbjct: 1569 AQFCTSPFGKMTFEQATRFITEAAFYGEADNLNGPSATISLGKPAKTGTGCFGLLQ 1624


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score = 1624 bits (4205), Expect = 0.0
 Identities = 899/1716 (52%), Positives = 1134/1716 (66%), Gaps = 71/1716 (4%)
 Frame = -3

Query: 5512 NEAPSEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINETDSC 5333
            ++  +E +D+I FSF + E+++K S  KIT+P LLD+   PVP GLYDPALGP++E   C
Sbjct: 8    SKGATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSERTIC 67

Query: 5332 KTCGLLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQYVAKL 5153
            KTCG  +  CPGHCGHIDLV P+YNPLLF  L  LLQ TCF C  FR    +V++ + +L
Sbjct: 68   KTCGQRSTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIKQL 127

Query: 5152 EHIARGDVVAAKKTETSLLAEAFSEDEDNGKDIKEKNAGVASCELE-TDSKDAKQKTWTS 4976
            E I +GD+V AK+ E+   +EA   +E    D+  ++       ++  D +  +Q+ WTS
Sbjct: 128  ELIVKGDIVGAKRLESVSPSEALYPEES---DLSHESCPTIHSGVQCNDGEHTRQQGWTS 184

Query: 4975 LQYAEAVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLSKT-TKDSDIRADFIRGSDVG 4799
            LQ+ EA+SVL+  +K + KKC NC  SNP I+ PTFGW   +   D+ IRA+ I G  +G
Sbjct: 185  LQFTEAMSVLNNFLKPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRANVITGHQLG 244

Query: 4798 ------LSSTAEDKSADANGDGTSQSEEELLAPTNVSEQLRNLPPDFFKRLYSSAGQKHL 4637
                  +  T + + A   GD  S +++         ++ R    +F ++   S   K L
Sbjct: 245  GLLGSEIEGTTDVEDAAEPGDQHSGTKKH-------KKKERKEVLEFTRQ--KSTFSKQL 295

Query: 4636 LPSEAQLILEGLWRNEAQLCSLICDIQQNNLNVTGKNKAY-AMFFLKVLLVPPSKFRPCA 4460
            LPSE +  LE LW+NEA++CS I D+QQ      GK KA  AMFFL+ +LVPP KFRP  
Sbjct: 296  LPSEVKEKLELLWKNEARICSFISDLQQQEF---GKRKAGPAMFFLETILVPPIKFRPPT 352

Query: 4459 FGGRQVVEHPQNLLLSKVQESNIALQELITSDPDHPNTIRRWMDLQRSVTVLFDSSKGLA 4280
             GG  V+EHPQ +LLSKV +SNI+L +   +  +H   +RRW+DLQ+S+  LFDS     
Sbjct: 353  KGGDSVMEHPQTVLLSKVLQSNISLGDAHINK-EHSKIVRRWLDLQQSINTLFDSKTAKG 411

Query: 4279 KSEKD-TNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALKLT 4103
              +++   GI QLLEKK G+ RQKMMGKRVN+ACRSVISPDPY+ VNEIGIPP FA+KLT
Sbjct: 412  PGQREGAPGICQLLEKKEGLFRQKMMGKRVNYACRSVISPDPYIGVNEIGIPPCFAVKLT 471

Query: 4102 YPERVTPWNVNKLRHAVINGADIHPGASHYMDKDRLYKLQVSRSMRNAIGRKLPTSRGVT 3923
            YPERVTPWN+ KLR+AVING++ HPGA+HY+DK  + KL  +R  R +I RKLP+SRG  
Sbjct: 472  YPERVTPWNIAKLRNAVINGSECHPGATHYVDKLSINKLPPARKARISISRKLPSSRGAV 531

Query: 3922 SQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGEKTLRMHYANC 3743
            +Q+GKG E +FEGK+VYRHLQDGD+VLVNRQPTLHKPS+MAHVVRVL GEKTLRMHYANC
Sbjct: 532  TQAGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANC 591

Query: 3742 S-TYNADFDGDEMNVHFPQDEISRAEAMNIVNANKQYIVPTSGDPIRGLIQDHIVSAVLL 3566
            S TYNADFDGDEMNVHFPQDE+SRAEA NIVNAN Q++ P++G+P+RGLIQDHIVSAVLL
Sbjct: 592  SITYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQFVRPSNGEPLRGLIQDHIVSAVLL 651

Query: 3565 SKQDTFLTREQYHQLLYASCLPPAVNSLQPGIF----GQKVSVLNSDDEIQPIPPAIWKP 3398
            +K+DTFL++++++QLLY+S     V+++ P  F    GQKV    S+DEIQ +PPAIWKP
Sbjct: 652  TKKDTFLSQDEFNQLLYSS----GVSTVGPNSFHGRPGQKVLWSRSEDEIQTLPPAIWKP 707

Query: 3397 KPLWTGKQVITAILCHITRGRSPFTIEKDGRIPKEYF---------------------AK 3281
            KPLWTGKQVITAIL HIT    PFT+EKD +IP  +F                      K
Sbjct: 708  KPLWTGKQVITAILNHITSDHPPFTVEKDAKIPSNFFKSRANEDKPCQEEKSDKDAPAEK 767

Query: 3280 DSKEFSMHIYKNEFIHGIIDKAQFGKYGLVHIVHELYGADTAGSLLSIFSRLFTTFLQMH 3101
            +  E  M +YKNE + G+IDK QFG+YGLVH VHEL G+ TAG LLS+ SRLFT +LQMH
Sbjct: 768  EPDEEKMLVYKNELVRGVIDKGQFGEYGLVHTVHELLGSHTAGILLSVLSRLFTAYLQMH 827

Query: 3100 AFTCGVDDLLLLQEADMGREVMLEKSEAQSGDVHFRFTGTK--RGDIDPLDLCREIEKVV 2927
             FTCGVDDLL+L   D  R+  LE  E     VH  F G K  +  IDP+ +   IEK +
Sbjct: 828  GFTCGVDDLLILTNKDEERKKQLEWCEKSGEAVHRNFIGIKDEKIKIDPVAMQLNIEKTI 887

Query: 2926 RSNGESATARLDRMMSNSLNVLTSE-VNKALFPAGLQKPFPRNCLSLMTTTGAKGGLVNL 2750
            RS+G+SA A LDR MSN LN  TS  V   L   GL KP  +NC+SLMTT+GAKG  VN 
Sbjct: 888  RSDGDSALAYLDRQMSNELNTKTSSGVISNLLSDGLLKPSGKNCISLMTTSGAKGSKVNF 947

Query: 2749 TQISSLLGQQELEGKRVPRMISGKTLPSFPPWDTSCRAGGFISDRFLTGLRPQEYYFHCM 2570
             QISS LGQQELEGKRVPRM+SGKTLP F PWD + R+GG+I+DRFLTGLRPQEYYFHCM
Sbjct: 948  QQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARSGGYITDRFLTGLRPQEYYFHCM 1007

Query: 2569 AGRDGLVDTAIKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSVVQFAYGEDGVDVLKT 2390
            AGR+GLVDTA+KTSRSGYLQRCLIKNLE LK+ YD+TVRDADGSVVQF YGEDGVDV +T
Sbjct: 1008 AGREGLVDTAVKTSRSGYLQRCLIKNLECLKIGYDHTVRDADGSVVQFYYGEDGVDVHQT 1067

Query: 2389 SYITEVQVLSNNQRVVLESLSCQLEDAHLSKSNSFIKELPDSLRERATNLSRQLSKSG-- 2216
            S+I + + L+ NQ ++ +    Q     L   NS+I ELP++L+E+A       S  G  
Sbjct: 1068 SFIAKFKELALNQDMIYKRSGGQ-----LGAFNSYISELPEALKEKADRFLDDFSIMGRI 1122

Query: 2215 SRHQIXXXXXXXXXXXXXXXXLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVT 2036
            + + +                LA+PGEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVT
Sbjct: 1123 ASNLVKREDLYNLMKQKFLLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVT 1182

Query: 2035 LGIPRLQEILMSAKEAIRTPIMTCPLLDGMTKEDGERFAAKLRRICVADIVESMEVSTVP 1856
            LGIPRLQEILM+A   I+TPIMTCPL +G T ED +  A KLR++ VADIVESMEVS VP
Sbjct: 1183 LGIPRLQEILMTASIDIKTPIMTCPLQEGRTNEDADHLADKLRKVTVADIVESMEVSVVP 1242

Query: 1855 FYIHKRRVSTLYKLKMKLYPCGLYPPHIDISLEDCRAILRTTFISAMEDAIKKHLDLISR 1676
            F I    V  +YKLKMKLY    YP + +IS+ED    L   F+  +EDAI+ H+ L+SR
Sbjct: 1243 FAIQDGGVCRIYKLKMKLYRPAHYPQYANISVEDWEETLEVVFLRELEDAIQNHMFLLSR 1302

Query: 1675 ISGIEVVSGKGDNSXXXXXXXXXGSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 1496
            ISGI+                    ++                                A
Sbjct: 1303 ISGIK--------DFLPESRSRASGEADEDVAGDMSHREERDDDNDDDDGERADDLGLDA 1354

Query: 1495 EKRKKQTCDELEYEDGMEKQTSVSVDEHDGVSS---SGFESEVDQAEAEEDYEIGGDDPV 1325
            +KRK Q  DE++Y+DG E++    ++E +  +S   SGFESE+DQ + E   EI  D  +
Sbjct: 1355 QKRKLQATDEMDYDDGFEEE----LNEGESTASEEESGFESEIDQGDNET--EISNDVML 1408

Query: 1324 -TVAEEKMP------EDDLGVVADEESPDNPVPXXXXXXXXXXXXXXXKEVDYAIFVEAK 1166
               A E +P             A+  S                     K+ D AIFVEA+
Sbjct: 1409 DNEASETLPLRKPSKPKSKKKAAESPSHGEKSKDKKKKPKAKRKSRISKDFDRAIFVEAR 1468

Query: 1165 GLNFEAHFALSGEHHILLAEIAQKTARRVYVKESKNIDRCSVVEPKRS---------TDR 1013
             ++FE HF  + E HILLAEIAQKTA++VY++    I++C V + K S          +R
Sbjct: 1469 KMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQCRVTDCKESQVIYYGKDPKER 1528

Query: 1012 I-----------ALQTAGVNFLAFWDLQDDLDINRVVTNDIHAMLNTYGVEAARATIINE 866
            +           AL   GV+F  FW +QD LD+  + +N+IHAML TYGVEAAR TII E
Sbjct: 1529 VDLKPDVKEKVPALHATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKTYGVEAARETIIRE 1588

Query: 865  VKAVFEPYGIRVNTRHLSLIADFMSAHGGYRPMNRIGMMEFNTSPFSKMTFETATRFIVE 686
            +  VF+ YGI V+ RHLSLIADFM+  GGYRPM+R+G +  + SPFSKM+FETA++FIVE
Sbjct: 1589 INHVFKSYGIAVSNRHLSLIADFMTHTGGYRPMSRMGGIAESISPFSKMSFETASKFIVE 1648

Query: 685  AAFHGESDVLQSPSASVCLGQPVKFGTGTFGLLQKL 578
            AA HGE D L++PSA +CLG PVK GTG+F L+QKL
Sbjct: 1649 AALHGEIDNLETPSARICLGLPVKMGTGSFDLMQKL 1684


>ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Gossypium
            raimondii] gi|763751831|gb|KJB19219.1| hypothetical
            protein B456_003G089300 [Gossypium raimondii]
          Length = 1674

 Score = 1589 bits (4115), Expect = 0.0
 Identities = 875/1715 (51%), Positives = 1131/1715 (65%), Gaps = 66/1715 (3%)
 Frame = -3

Query: 5524 MAVANEAPSEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINE 5345
            MA   E  ++ VDA+ F+F + E+++K SV K+T+ +LLD    P+P GLYDP LGP+ +
Sbjct: 1    MAQITEGATDSVDAVWFNFMTTEEVRKHSVLKLTNANLLDFMNRPMPGGLYDPVLGPLED 60

Query: 5344 TDSCKTCGLLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQY 5165
               CK+CGLL   CPGHCGHIDLV P+YNPLLF  L  L+Q TCF C+ FR    +V++ 
Sbjct: 61   RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLIQRTCFFCYHFRAERTEVEKC 120

Query: 5164 VAKLEHIARGDVVAAKKTETSLLAEAFSEDEDNGKDIKEKNAGVASCELETDSKDAKQKT 4985
            +++L+ I +GD+V AK+ ++       S+D  +  +  E    + S   E+++ + K+  
Sbjct: 121  ISQLKLIGKGDIVGAKRLDSD------SKDSSSHPENSEGCQKLGSRLHESEAVNPKE-- 172

Query: 4984 WTSLQYAEAVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLSKT-TKDSDIRADFIRGS 4808
            WTSLQ  EA+SVL+  +K ++K+C NC   NP I+ PTFGW   +    S +R + IRG 
Sbjct: 173  WTSLQLTEAMSVLNKFLKVKYKRCKNCDAKNPAITKPTFGWFHTSGMSGSQMRENVIRGC 232

Query: 4807 DVGLSSTAEDKSADANGDGTSQSEEEL-LAPTNVSE--------------QLRNLPPDFF 4673
             +  + + E  S   + +  S SEE + +  T   E              +   +P +F 
Sbjct: 233  KMADTFSGEVGSDIEDANDASSSEEGVDITKTKTPEIGFKGADGTSAKARKKAKVPLEFL 292

Query: 4672 KRLYSSAGQKHLLPSEAQLILEGLWRNEAQLCSLICDIQQNNLNVTGKNKAYAMFFLKVL 4493
            K+    +G   LLPSE + +++ LW NE +LCSLI  IQQ      G+   Y+MFFL+ +
Sbjct: 293  KQKNLFSGP--LLPSEVKKVMKLLWENEIELCSLINCIQQQGF---GEKVGYSMFFLETV 347

Query: 4492 LVPPSKFRPCAFGGRQVVEHPQNLLLSKVQESNIALQELITSDPDHPNTI-RRWMDLQRS 4316
            LVPP KFR    GG  V+EHPQ +LLSKV ++NI+L     +D      I R WMDLQ+S
Sbjct: 348  LVPPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYNNDLQSSKVIVRLWMDLQQS 407

Query: 4315 VTVLFDSSKGLAKSEKDTNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEI 4136
            + +LFDS   +++    + GI QLLE+K G+ RQKMMGKRVNFACRSVISPDPYLAVNEI
Sbjct: 408  INLLFDSKTAMSQRRDVSPGICQLLERKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEI 467

Query: 4135 GIPPYFALKLTYPERVTPWNVNKLRHAVINGADIHPGASHYMDKDRLYKLQVSRSMRNAI 3956
            GIPPYFAL+LTYPERVTPWNV KLR A+ING+++HPGA+HY+DK    +L  +R  R +I
Sbjct: 468  GIPPYFALRLTYPERVTPWNVVKLREAIINGSELHPGATHYVDKLSTQRLPPNRKARISI 527

Query: 3955 GRKLPTSRGVTSQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNG 3776
             RKLP+SR   +Q GK  +Y+FEGK+V RHLQDGD+VLVNRQPTLHKPS+MAHVVRVL G
Sbjct: 528  SRKLPSSRAAITQPGKNFDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKG 587

Query: 3775 EKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAMNIVNANKQYIVPTSGDPIRGLI 3596
            EKT+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA NIVNAN QY+ P++G+P+R LI
Sbjct: 588  EKTIRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPLRALI 647

Query: 3595 QDHIVSAVLLSKQDTFLTREQYHQLLYASCLPPAVNSLQPGIFGQKVSVLNSDDEIQPIP 3416
            QDHIVSAVLL+K+DTFL+R++++QLLY+S +       + G  GQKV + +S++ + PI 
Sbjct: 648  QDHIVSAVLLTKRDTFLSRDEFNQLLYSSGVSGLAQHHRLGKSGQKVLISSSEEGMLPIL 707

Query: 3415 PAIWKPKPLWTGKQVITAILCHITRGRSPFTIEKDGRIPKEYF---------------AK 3281
            PAI KPKPLWTGKQVITA+L HITRGR PFT+EK G+ P+++F                K
Sbjct: 708  PAILKPKPLWTGKQVITAVLNHITRGRPPFTVEKTGKTPRDFFKNRSNENKPKSVGQEGK 767

Query: 3280 DSKEFS--------MHIYKNEFIHGIIDKAQFGKYGLVHIVHELYGADTAGSLLSIFSRL 3125
            D++E S        + IYKN+ + G+IDKAQF  YGLVH V ELYG++TAG LLS+FSRL
Sbjct: 768  DAEENSNKEPDEEKILIYKNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGFLLSVFSRL 827

Query: 3124 FTTFLQMHAFTCGVDDLLLLQEADMGREVMLEKSEAQSGDVHFRFTGTK-RGDIDPLDLC 2948
            FT FLQMH FTCGVDDLL++ + D+ R+  LE+ E +  + H+ F   K   +I P++L 
Sbjct: 828  FTVFLQMHGFTCGVDDLLIMNDKDIERKKQLEECEKKVTEAHYEFCAVKVDTEIAPIELQ 887

Query: 2947 REIEKVVRSNGESATARLDRMMSNSLNVLTSE-VNKALFPAGLQKPFPRNCLSLMTTTGA 2771
             +IEK +R +GE+A   LDR M + LN  +S+ V   L   GL KP  RNC+SLMTTTGA
Sbjct: 888  LKIEKTIRRDGEAALTALDRTMISVLNKNSSQGVLTELLSEGLVKPMGRNCISLMTTTGA 947

Query: 2770 KGGLVNLTQISSLLGQQELEGKRVPRMISGKTLPSFPPWDTSCRAGGFISDRFLTGLRPQ 2591
            KG  VN  QISS LGQQELEGKRVPRM+SGKTLP F PWD + RAGGFISDRFLTGLRPQ
Sbjct: 948  KGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRFLTGLRPQ 1007

Query: 2590 EYYFHCMAGRDGLVDTAIKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSVVQFAYGED 2411
            EYYFHCMAGR+GLVDTA+KTSRSGYLQRCLIKNLE LK+ YD+TVRDADGS+VQF YGED
Sbjct: 1008 EYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIVQFNYGED 1067

Query: 2410 GVDVLKTSYITEVQVLSNNQRVVLESLSCQLEDAHLSKSNSFIKELPDSLRERATNLSRQ 2231
            G+DV +TS++T+ + L+ N  V+ E LS  L + + S      K LPD LR++A     Q
Sbjct: 1068 GIDVHQTSFVTKFEALALNCDVMSEKLSSMLGEPYDSG-----KILPDDLRDKAV----Q 1118

Query: 2230 LSKSGSRHQIXXXXXXXXXXXXXXXXLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRG 2051
              K   + +I                LA+PGEPVGV+AAQSVGEPSTQMTLNTFHLAGRG
Sbjct: 1119 FIKDNRQQKIKTKNFLKLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRG 1178

Query: 2050 EMNVTLGIPRLQEILMSAKEAIRTPIMTCPLLDGMTKEDGERFAAKLRRICVADIVESME 1871
            EMNVTLGIPRLQEILM+A   I+TP+MTCPL  G TKED  R A K+++I VA+I+ESM 
Sbjct: 1179 EMNVTLGIPRLQEILMTASIDIKTPVMTCPLHKGKTKEDALRLADKMKKITVAEILESMG 1238

Query: 1870 VSTVPFYIHKRRVSTLYKLKMKLYPCGLYPPHIDISLEDCRAILRTTFISAMEDAIKKHL 1691
            VS  PF IH   + ++YKLKM+L   G Y  + DI++ DC+ IL   F+  +EDAI+ HL
Sbjct: 1239 VSVTPFAIHNGDICSIYKLKMRLGKPGRYLKNSDITVTDCQHILEVVFLRELEDAIQNHL 1298

Query: 1690 DLISRISGIE-VVSGKGDNSXXXXXXXXXGSKSXXXXXXXXXXXXXXXXXXXXXXXXXXX 1514
             L+SRISGI+  +     N+          S+S                           
Sbjct: 1299 VLLSRISGIKNFMPDSRPNASSETDEDVPESRS-----------HETENDDDTDDEGRAE 1347

Query: 1513 XXXXXAEKRKKQTCDELEYEDGMEKQTSVSVDEHDGVSSSGFESEVDQAEAE----EDYE 1346
                 A+K+K+Q  DE++YEDG E+      ++++G S +G ESE D +E E    E+  
Sbjct: 1348 DLGLDAQKQKQQATDEMDYEDGSEE------EQNEGASLAGLESENDMSEDENGTIENNV 1401

Query: 1345 IGGDDPVTVAEEKMPE-DDLGVVADEESPDNPVPXXXXXXXXXXXXXXXKEVDYAIFVEA 1169
            IG D+         P  +D   +   E      P               KE D AIF   
Sbjct: 1402 IGSDNEKDDIFHGSPNAEDGSKLKSREGNTRAEP----KRKKMRGKFIRKETDRAIFSAT 1457

Query: 1168 KGLNFEAHFALSGEHHILLAEIAQKTARRVYVKESKNIDRCSVVE--------------- 1034
            KGL FE HF    E HILLA+IA+KTA++VY++    ID+C V +               
Sbjct: 1458 KGLVFEVHFKFVNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKQ 1517

Query: 1033 ---PKRSTDRIALQTAGVNFLAFWDLQDDLDINRVVTNDIHAMLNTYGVEAARATIINEV 863
               P    +  AL TAGV+F AFW ++  LD+  + +N+IHAMLNTYGVEAAR TII+E+
Sbjct: 1518 RKSPSGKANIPALHTAGVDFGAFWKMEGHLDVRYLYSNNIHAMLNTYGVEAARETIISEI 1577

Query: 862  KAVFEPYGIRVNTRHLSLIADFMSAHGGYRPMNRIGMMEFNTSPFSKMTFETATRFIVEA 683
              VF  YGI VN RHL+LIADFM+  G YRPM+R+G +    SPFSKM+FETA++FIV+A
Sbjct: 1578 SNVFTSYGIGVNIRHLTLIADFMTHSGRYRPMSRLGSIAECISPFSKMSFETASKFIVDA 1637

Query: 682  AFHGESDVLQSPSASVCLGQPVKFGTGTFGLLQKL 578
            A HG  D L++PS+ +CLG PVK GTG+FGL+Q +
Sbjct: 1638 AKHGLVDNLETPSSRICLGLPVKMGTGSFGLMQNV 1672


>gb|EMS52925.1| DNA-directed RNA polymerase I subunit rpa1 [Triticum urartu]
          Length = 1915

 Score = 1588 bits (4112), Expect = 0.0
 Identities = 861/1703 (50%), Positives = 1119/1703 (65%), Gaps = 59/1703 (3%)
 Frame = -3

Query: 5509 EAPSEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINETDSCK 5330
            +A S  VD+I F FY+ ++++++SVK++T  + LD K  PVP GL DPA+GP+N  D+CK
Sbjct: 252  QATSVEVDSILFGFYTDDEVRRLSVKRLTRSERLDAKMCPVPGGLLDPAMGPVNANDTCK 311

Query: 5329 TCGLLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQYVAKLE 5150
            TC      CPGH GHI+L KPL+NPLLF  L++LL+ TCF C +FR     V +Y  +LE
Sbjct: 312  TCAQQPGNCPGHFGHIELSKPLFNPLLFDTLRDLLRSTCFTCRKFRLSAQLVDRYARELE 371

Query: 5149 HIARGDVVAAKKTETSLLAEAFSEDEDNGKDIKEKNAGVASCELETDSKDAKQKTWTSLQ 4970
             +ARGDVV AK  + S ++E   E +++G           S +      D   K WTS+Q
Sbjct: 372  LLARGDVVQAKNLQDSAVSEESVEMDEDG-----------SVDKPASPSDRGNKIWTSIQ 420

Query: 4969 YAEAVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLS-KTTKDSDIRADFIRGSDVGLS 4793
              EA S+ S +MK R  KCANCG  NP I    +GWL+ + T  S +R   I  +D  L 
Sbjct: 421  LKEAHSIFSKLMKKRVNKCANCGMKNPPIKCQIYGWLTIQGTDGSAVRRKAI--TDYNLE 478

Query: 4792 STAEDKSADANGDGTSQSEEELLAPTNVSEQLRNLPPDFFKRLYSSAGQKHLLPSEAQLI 4613
               +   ++ NG G S   ++ +  +  S Q ++L  D           + LL +E + I
Sbjct: 479  G--DGHISNPNGTGVSGLTDDRVKAS--SNQTKDLSDD-----------RPLLATEVESI 523

Query: 4612 LEGLWRNEAQLCSLICDIQQNNLNVTGKNKAYAMFFLKVLLVPPSKFRPCAFGGRQVVEH 4433
            L+ LW  EA+ C L+CD Q+N L V+ K + Y MFFLK +LVPP++FRP       ++EH
Sbjct: 524  LKDLWEKEARFCMLLCDFQKN-LCVSEKRRGYEMFFLKSMLVPPNRFRPSTNSSLGIMEH 582

Query: 4432 PQNLLLSKVQESNIALQELITSDPDHPNTIRRWMDLQRSVTVLFDSSKGLAKSEKDTNGI 4253
            PQN++LSKVQE+N+ALQ     +P+H + + RW DLQ SV + +DSSKGL KS+KD +G+
Sbjct: 583  PQNVMLSKVQEANLALQH---DNPNHMDILTRWRDLQTSVNLFYDSSKGLVKSDKDGHGV 639

Query: 4252 RQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALKLTYPERVTPWNV 4073
            RQL++KK GI+RQK+MGKRVN +CR+VISPDP+LAVNEIGIPP  A KLTYPE+VTPWN 
Sbjct: 640  RQLVDKKTGIVRQKIMGKRVNHSCRTVISPDPFLAVNEIGIPPAAASKLTYPEKVTPWNA 699

Query: 4072 NKLRHAVINGADIHPGASHYMDKDRLYKLQVSRSMRNAIGRKLPTSRGVTSQSGKGPEYD 3893
              LR A+ NGA+IHPGA+HY   + LYKLQ   S R+   + L  SRG  SQ GK P  +
Sbjct: 700  KNLRGAIRNGAEIHPGATHYKVNNNLYKLQADHSKRHPTAKTLLASRGSISQPGKDPRCE 759

Query: 3892 FEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGEKTLRMHYANCSTYNADFDGD 3713
            FE KVVYRH+QDGDIVLVNRQPTLHKPSMMAHVVRVL GEKT+RMHYANCSTYNADFDGD
Sbjct: 760  FESKVVYRHIQDGDIVLVNRQPTLHKPSMMAHVVRVLPGEKTIRMHYANCSTYNADFDGD 819

Query: 3712 EMNVHFPQDEISRAEAMNIVNANKQYIVPTSGDPIRGLIQDHIVSAVLLSKQDTFLTREQ 3533
            EMNVHFPQDEISRAEA+NIV+ANKQYI P SG+ +RGLIQDHIV AVLL+K DTFL+RE+
Sbjct: 820  EMNVHFPQDEISRAEAINIVDANKQYIGPRSGEAVRGLIQDHIVGAVLLTKVDTFLSREE 879

Query: 3532 YHQLLYASCLPPAVNSLQPGIFGQKVSVLNSDDEIQPIPPAIWKPKPLWTGKQVITAILC 3353
            Y QL+Y SC+       Q    G++VS++N DD ++ +PPA  KP+  WTGKQVIT IL 
Sbjct: 880  YSQLVYGSCVSSTRGPCQS---GKRVSIVNDDDTLELLPPAFVKPE-RWTGKQVITTILN 935

Query: 3352 HITRGRSPFTIEKDGRIPKEYFA------------KDSKEFSMHIYKNEFIHGIIDKAQF 3209
            H+T+G  PFT+E  G+I  +Y              +D +E  ++I  NE + G+IDK QF
Sbjct: 936  HLTKGHPPFTVEMKGKISVQYLTAKVRHVAEGEKLRDPEELVLYIRHNELLKGMIDKNQF 995

Query: 3208 GKYGLVHIVHELYGADTAGSLLSIFSRLFTTFLQMHAFTCGVDDLLLLQEADMGREVMLE 3029
            G +G+VH VHELYGADTAG LLSIFSRLFT FLQ H FTCG+DDLLL QE++  R   L 
Sbjct: 996  GNHGIVHTVHELYGADTAGRLLSIFSRLFTLFLQFHGFTCGIDDLLLSQESNNERTDFLS 1055

Query: 3028 KSEAQSGDVHFRFTGTKRGDIDPLDLCREIEKVVRSNGESATARLDRMMSNSLNVLTSEV 2849
            KSE  S + H +F   K  D D ++L   IEKVVR  GESA   LD+ M + LN LT++V
Sbjct: 1056 KSEEHSEEAHKKFLCKKDVDTDLVELQMNIEKVVRRIGESANVALDKAMLSELNGLTTKV 1115

Query: 2848 NKALFPAGLQKPFPRNCLSLMTTTGAKGGLVNLTQISSLLGQQELEGKRVPRMISGKTLP 2669
            NK +FP GLQKPFP+NCL+LMT TGAKGG VN+TQISSLLG Q+LEG RVPRMISGK+LP
Sbjct: 1116 NKNMFPYGLQKPFPKNCLTLMTATGAKGGDVNMTQISSLLGSQDLEGARVPRMISGKSLP 1175

Query: 2668 SFPPWDTSCRAGGFISDRFLTGLRPQEYYFHCMAGRDG-------------LVDTAIKTS 2528
             FPPWD S RAGG++SDRFLTGLRPQEYYFHCMAGR+G             L+DTA+KTS
Sbjct: 1176 CFPPWDGSSRAGGYVSDRFLTGLRPQEYYFHCMAGRNGHTWLFVFVRSGDKLIDTAVKTS 1235

Query: 2527 RSGYLQRCLIKNLESLKVCYDYTVRDADGSVVQFAYGEDGVDVLKTSYITEVQVLSNNQR 2348
            RSGYLQRCLIK+LESL V YD++VR+ DGS++QF YGEDGVDV K+S++ + + L++N++
Sbjct: 1236 RSGYLQRCLIKSLESLFVSYDHSVRNVDGSIIQFCYGEDGVDVHKSSFLKKFKELADNRK 1295

Query: 2347 VVLESLSCQLEDAH------LSKSNSFIKELPDSLRERATNLSRQ--------LSKSGSR 2210
             V + L+    +        LS  + +I +LP  L + ATN  ++          K   R
Sbjct: 1296 AVSDRLARYKGELDIYNGDPLSFKSKYITKLPQELTKSATNFHKENKCCCRKLKKKCRCR 1355

Query: 2209 HQIXXXXXXXXXXXXXXXXLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLG 2030
            + I                L +PGE VGVI AQS+GEPSTQMTLNTFHLAGRG+MNVTLG
Sbjct: 1356 YNIKEEELMKLLKVKYVASLVDPGEAVGVILAQSLGEPSTQMTLNTFHLAGRGDMNVTLG 1415

Query: 2029 IPRLQEILMSAKEAIRTPIMTCPLLDGMTKEDGERFAAKLRRICVADIVESMEVSTVPFY 1850
            +PR+QEILM A   I TP M CP+ +G  ++D  R A KLR + +AD+VE +EV TVPF+
Sbjct: 1416 MPRIQEILMKASANIGTPYMKCPVHEGKKRKDAARLAEKLRGVTLADVVEGIEVCTVPFH 1475

Query: 1849 IHKRRVSTLYKLKMKLYPCGLYPPHIDISLEDCRAILRTTFISAMEDAIKKHLDLISRIS 1670
                 +S+LYKL +KL+    YPP  ++++++C+A LRT F+ AME AI+KHL+L+ ++S
Sbjct: 1476 NSNGHISSLYKLHLKLFSPDCYPPESELTVDECQASLRTVFVDAMEYAIEKHLNLLHKVS 1535

Query: 1669 GIEVVSGKGDNSXXXXXXXXXGSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEK 1490
            GI+    K   S            S                                AEK
Sbjct: 1536 GIQETRVKDTESL----------PSEGPEESEGRPTDGDESDASDGDDENEDDLGADAEK 1585

Query: 1489 RKKQTCDELEYEDGMEKQTSVSVDEHDGVSSSGFESEVDQAEAEEDYEIGGDDPVTVAEE 1310
            RK+Q  DE+EYED +E +  ++ D  D  +    ++E D AE+  + E   +  ++ +  
Sbjct: 1586 RKRQENDEMEYEDDIENEDGMNSDP-DEETKHELDNEDDPAESGVESEENDEGHLSDSSN 1644

Query: 1309 KMPEDDLGVVAD--EESPDNPVPXXXXXXXXXXXXXXXKEVDYAIFVEAKGLNFEAHFAL 1136
            K  + + G+ A   ++  +  V                K++   + VE+  LNFE H+ L
Sbjct: 1645 KTAKLEGGLAATKLKKKRNETVENLKEQKQAQITQKRSKKLKLTVHVESADLNFEVHYIL 1704

Query: 1135 SGEHHILLAEIAQKTARRVYVKES--KNIDRCSVVEP-----------KRSTDR----IA 1007
              E HILL++IAQKT R ++V  S  KNI  C+V+ P           ++ T+R      
Sbjct: 1705 HKEPHILLSQIAQKTLRSLFVSGSHNKNIGLCNVIWPEKKKKGETETKQKETEREEAYRG 1764

Query: 1006 LQTAGVNFLAFWDLQDDLDINRVVTNDIHAMLNTYGVEAARATIINEVKAVFEPYGIRVN 827
            LQT+G++F  FWDLQD L++ ++ +NDIHAML TYGVEAARATIINEVKAVFEP+GI+V+
Sbjct: 1765 LQTSGLDFEVFWDLQDFLNVRKLTSNDIHAMLRTYGVEAARATIINEVKAVFEPFGIKVD 1824

Query: 826  TRHLSLIADFMSAHGGYRPMNRIGMMEFNTSPFSKMTFETATRFIVEAAFHGESDVLQSP 647
             RHLSL AD+M++ G YRPMN +GM  F TSPF KM+FE ATRFI+EAA+HGE D L  P
Sbjct: 1825 PRHLSLAADYMTSGGSYRPMNSLGMARFCTSPFGKMSFEQATRFIMEAAYHGEVDNLTGP 1884

Query: 646  SASVCLGQPVKFGTGTFGLLQKL 578
            SA+V LG+P K GTG FGL+Q +
Sbjct: 1885 SATVSLGKPAKTGTGAFGLMQNI 1907


>emb|CDP10074.1| unnamed protein product [Coffea canephora]
          Length = 1680

 Score = 1578 bits (4086), Expect = 0.0
 Identities = 865/1704 (50%), Positives = 1105/1704 (64%), Gaps = 63/1704 (3%)
 Frame = -3

Query: 5500 SEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINETDSCKTCG 5321
            SE V+ + FSF ++E+++K SV KI +P LLD  G P+P GLYDPA+GP +E   CK+CG
Sbjct: 10   SEAVEKVLFSFMTSEEVRKHSVVKIKNPVLLDTVGRPMPGGLYDPAMGPFDEQSPCKSCG 69

Query: 5320 LLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQYVAKLEHIA 5141
              ++ C GHCGHI+LV P YNPLLF +L NLLQ TCF+C  FR   ++V + V +LE IA
Sbjct: 70   QRSFHCTGHCGHIELVSPAYNPLLFNMLYNLLQRTCFYCFHFRSSTEEVDKCVLQLERIA 129

Query: 5140 RGDVVAAKKTETSLLAEAFSEDEDNGKDIKEKNAGVASCELETDSKDAKQKTWTSLQYAE 4961
            +GDV+ AK+ +      A S D DN +D +  +    +     + +  KQ +W S Q+ E
Sbjct: 130  KGDVIGAKRLDA-----ASSADLDNSEDSEGSHVSCGNVYHGAE-EHMKQPSWDSFQFTE 183

Query: 4960 AVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLSKTTKDSDIRADFIRGS--DVGLSST 4787
            A+SVL++ +K +  KC  C   NPKI  PTFGW      +++ RA+ IRG   D   S  
Sbjct: 184  AMSVLNMFLKPKLSKCGKCEAKNPKIKKPTFGWFHMVVSNAETRANIIRGHRLDGFRSGG 243

Query: 4786 AEDKSA-------DANGDGTSQSEEELL------APTNVSEQLRNLPPDFFKRL--YSSA 4652
            +E++S+       D+  +  SQ+ +           T V+++  N P    + L     A
Sbjct: 244  SEERSSSEVVNANDSLWEDDSQTGKTASYTVSDGIDTPVAKKSPNQPGRVGEELKKQKEA 303

Query: 4651 GQKHLLPSEAQLILEGLWRNEAQLCSLICDIQQNNLNVTGKNKAYAMFFLKVLLVPPSKF 4472
              +HLLPSE + +++ LW NEA LCS ICD+Q+   N       Y+MFFL  +LVPP KF
Sbjct: 304  FSEHLLPSEVRDVVKRLWENEAPLCSFICDLQREQHNSAAGIAGYSMFFLDSILVPPIKF 363

Query: 4471 RPCAFGGRQVVEHPQNLLLSKVQESNIALQELITSDPDHPNTIRRWMDLQRSVTVLFDSS 4292
            RP A  G  V+EHP   LLSKV +SNIAL     ++ +    + RWMDLQ+S++VL+DS 
Sbjct: 364  RPLARTGDAVMEHPHTNLLSKVLQSNIALGNAYINNAERYKIVNRWMDLQQSISVLYDSK 423

Query: 4291 KGLAKSEK-DTNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFA 4115
                +S+K    GI QLLEKK GI RQKMMGKRVNFACRSVISPDPYLAVNEIG+PPYFA
Sbjct: 424  TTTGQSQKAGPVGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGVPPYFA 483

Query: 4114 LKLTYPERVTPWNVNKLRHAVINGADIHPGASHYMDKDRLYKLQVSRSMRNAIGRKLPTS 3935
            L+LTYPERVTPWNV KLR A++NG +IHPGA  Y DK    KL  S+ MR AI RKLP+S
Sbjct: 484  LRLTYPERVTPWNVGKLRGAIVNGPEIHPGALSYTDKVSTVKLPSSKKMRIAISRKLPSS 543

Query: 3934 RGVTSQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGEKTLRMH 3755
            RGV +Q GK  E++FEGKVVYRHLQDGD+VLVNRQPTLHKPS+MAHVVRVL GEKTLRMH
Sbjct: 544  RGVVTQLGKNSEHEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 603

Query: 3754 YANCSTYNADFDGDEMNVHFPQDEISRAEAMNIVNANKQYIVPTSGDPIRGLIQDHIVSA 3575
            YANCS+YNADFDGDEMNVHFPQDEISRAEA NIVNAN+QYIVPT GD +RGLIQDHI SA
Sbjct: 604  YANCSSYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTRGDTVRGLIQDHIGSA 663

Query: 3574 VLLSKQDTFLTREQYHQLLYASCLPPAVNSLQPGIFGQKVSVLNSDDEIQPIPPAIWKPK 3395
            VLL+ +DTFLT ++++QLLY S +    +S     +  K+S+++S+  IQPI PA+ KPK
Sbjct: 664  VLLTMKDTFLTYDEFNQLLYGSGVFTTGSSCTFSNYSGKISIVDSEGIIQPILPAVLKPK 723

Query: 3394 PLWTGKQVITAILCHITRGRSPFTIEKDGRIPKEYFAKDSKEFS---------------- 3263
            PLWTGKQVITA+L  +T+G +P +IEK+ +IPK+YF  ++ E                  
Sbjct: 724  PLWTGKQVITALLNQLTKGCAPCSIEKEMKIPKQYFPTETYEVQQSENDDKENDEKKADN 783

Query: 3262 -MHIYKNEFIHGIIDKAQFGKYGLVHIVHELYGADTAGSLLSIFSRLFTTFLQMHAFTCG 3086
             + ++KNE + G+IDKAQFG++GLVH + ELYGA+TAG LLS  SRLFT FLQMH FTCG
Sbjct: 784  CLLVWKNELVRGVIDKAQFGQFGLVHSIQELYGANTAGLLLSALSRLFTMFLQMHGFTCG 843

Query: 3085 VDDLLLLQEADMGREVMLEKSEAQSGDVHFRFTGTKRGDIDPLDLCREIEKVVRSNGESA 2906
            V+DL++L   D+ R+  LE  E    DVH  F   KRG I PL+L  EIEKV+  + E+A
Sbjct: 844  VEDLIILPHFDLRRKEELE-GEDVGEDVHCEFVNFKRGQIGPLELQLEIEKVICRDREAA 902

Query: 2905 TARLDRMMSNSLNVLTSEVNKALFPAGLQKPFPRNCLSLMTTTGAKGGLVNLTQISSLLG 2726
            TA LD  M N L    S+++K L   GL KPFP+NC+SLMT +GAKG  VN  QISS LG
Sbjct: 903  TASLDMKMKNKLTKKASQISKELLLKGLLKPFPKNCISLMTISGAKGSTVNFQQISSYLG 962

Query: 2725 QQELEGKRVPRMISGKTLPSFPPWDTSCRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVD 2546
            QQELEGKRVPRM+SGKTLP FPPWD + RAGG+I+DRFL+GLRPQEYYFHCMAGR+GLVD
Sbjct: 963  QQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGYITDRFLSGLRPQEYYFHCMAGREGLVD 1022

Query: 2545 TAIKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSVVQFAYGEDGVDVLKTSYITEVQV 2366
            TA+KTSRSGYLQRCLIKNLESLKVCYDYTVRDADGS+VQF YGEDGVDV +TS++  ++ 
Sbjct: 1023 TAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIVQFYYGEDGVDVHRTSFLKNLRA 1082

Query: 2365 LSNNQRVVLESLSCQLEDAHLSKSNSFIKELPDSLRERATNLSRQLSKSGSRHQIXXXXX 2186
            L+ NQ  V +    + +       N++I ELPD L+ +A    + ++             
Sbjct: 1083 LALNQVPVRQKYERERD------FNAYIVELPDGLKRKAEGFLKGVNTDS------HMDF 1130

Query: 2185 XXXXXXXXXXXLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEIL 2006
                       LA  GEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEIL
Sbjct: 1131 MTLLAQKYLSSLAPSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEIL 1190

Query: 2005 MSAKEAIRTPIMTCPLLDGMTKEDGERFAAKLRRICVADIVESMEVSTVPFYIHKRRVST 1826
            M+A + I+TP+MTCP L   + +D +   AK+++I VADI+ESMEV  +P  +    +  
Sbjct: 1191 MTAAQVIKTPVMTCPFLQFKSMDDAKSLVAKVKKITVADIIESMEVHLLPLSVLNNGIGI 1250

Query: 1825 LYKLKMKLYPCGLYPPHIDISLEDCRAILRTTFISAMEDAIKKHLDLISRISGIEVVSGK 1646
            +YKL M       +  H   S EDC+  LR +F+  +EDAI+ HL L+SRISGI     K
Sbjct: 1251 IYKLMM------TFKHHEFASSEDCKETLRHSFLRELEDAIQNHLVLLSRISGI-----K 1299

Query: 1645 GDNSXXXXXXXXXGSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEKRKKQTCDE 1466
               S            +                                A+KRK+Q  DE
Sbjct: 1300 NIMSNTRSKGNETDEDASGVTSHEEGDDENDDGDGGKGNDDMAEDLGSDAQKRKQQATDE 1359

Query: 1465 LEYEDGMEKQTSVSVDEHDGVSSSGFESEVDQAEAEEDYEIGGDDPVTVAEEKMPEDDLG 1286
            ++YED  E +   S  +H+         E +  E +E  ++  +  + +      E D  
Sbjct: 1360 MDYEDITEDE---STADHEQGKDGQSNDEGEIREGKEAMDVDDEHAIEM------EHDNE 1410

Query: 1285 VVADEESPDNPVPXXXXXXXXXXXXXXXKEVDYAIFVEAKGLNFEAHFALSGEHHILLAE 1106
             ++  +S +                   KE D  IFVE +G  FEAHF  + E HILLA+
Sbjct: 1411 EMSKPKSGNKNGKSTLKKRKKAEKKFVRKETDRNIFVEVEGQKFEAHFGFTNEPHILLAQ 1470

Query: 1105 IAQKTARRVYVKESKNIDRCSVVEPKRSTDRI---------------------------- 1010
            IAQKTA+ VY+K S  I++C +VE   S + +                            
Sbjct: 1471 IAQKTAKHVYIKSSGKINQCKMVEHDVSENTVIWDAKKVDKKIKAKKQMKANVDDLLPYW 1530

Query: 1009 ALQTAGVNFLAFWDLQDDLDINRVVTNDIHAMLNTYGVEAARATIINEVKAVFEPYGIRV 830
            AL+ AGV+F+ FW++QDDLD  R+ +N IHAML TYGVEAARATII EV  VF  YG+++
Sbjct: 1531 ALKAAGVDFIPFWEMQDDLDTARIYSNSIHAMLETYGVEAARATIIREVTNVFGIYGVQI 1590

Query: 829  NTRHLSLIADFMSAHGGYRPMNRIGMMEFNTSPFSKMTFETATRFIVEAAFHGESDVLQS 650
            + RHLSLIAD+M+  GGYRPM+R G +  + SP +KM+FETA +FIVEAA HG +D L++
Sbjct: 1591 DYRHLSLIADYMTHSGGYRPMSRHGSIAESLSPLAKMSFETAGKFIVEAASHGMTDNLET 1650

Query: 649  PSASVCLGQPVKFGTGTFGLLQKL 578
            PS+ +CLG PVK GTG F L+Q+L
Sbjct: 1651 PSSRICLGLPVKMGTGCFDLMQQL 1674


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score = 1572 bits (4070), Expect = 0.0
 Identities = 873/1698 (51%), Positives = 1098/1698 (64%), Gaps = 49/1698 (2%)
 Frame = -3

Query: 5524 MAVANEAPSEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINE 5345
            M +  E  +  V+A+ FSF + ++I++ S  KITSP L+D    PVP+GLYD ALGP ++
Sbjct: 1    MVLTTEGATNSVEAVAFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDD 60

Query: 5344 TDSCKTCGLLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQY 5165
               CK+CG  +  CPGH GHI+LV P+YNPL+F IL N+LQ TCF CH FR    +V   
Sbjct: 61   KSLCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIR 120

Query: 5164 VAKLEHIARGDVVAAKKTETSL---LAEAFSEDEDNGKDIKEKNAGVASCELETDSKDAK 4994
             ++LE I +GD++ AK+ E+ +     ++F+ DE     I   +   + C     S +  
Sbjct: 121  TSQLELIMKGDIIRAKRLESIIPGKSVDSFNPDES----IHPGDGDESQCY----SAEQL 172

Query: 4993 QKTWTSLQYAEAVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLSKTTKDSD-IRADFI 4817
             + WTSLQ++EA+SVL  ++  +HKKC  CG  NPKIS PTFGW       +D  RAD I
Sbjct: 173  GENWTSLQFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMNVLSADETRADTI 232

Query: 4816 RGSDVGLSSTAEDKSADANGDGTSQSEEELLAPTNVSEQLRNLPPDFFKRLYSSAGQKHL 4637
            R  +   S T  D  +   GD T    E++ +        R      +K    +     L
Sbjct: 233  RSVE---SETTNDDISLGGGDTTDV--EDITSAGTAKRDKRKKEKLSYKLAEQNKLSGSL 287

Query: 4636 LPSEAQLILEGLWRNEAQLCSLICDIQQNNLNVTGKNKAYAMFFLKVLLVPPSKFRPCAF 4457
            LPS+ + ILE LW NEA+LCS I DIQ       GK   ++MFFL+ + VPP KFRP   
Sbjct: 288  LPSQVKGILELLWENEARLCSYINDIQDQGF---GKKAGHSMFFLENIFVPPIKFRPPTK 344

Query: 4456 GGRQVVEHPQNLLLSKVQESNIALQELITSDPDHPNTIRRWMDLQRSVTVLFDSSKGLAK 4277
            GG  V+EHPQ +LL+KV + NI+L +   +  D    + RWMDLQ+SV +LFD+     K
Sbjct: 345  GGDNVMEHPQTVLLTKVLQCNISLGDAHLNKSDPSKVLSRWMDLQQSVNMLFDNKTASGK 404

Query: 4276 SEKDTNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALKLTYP 4097
             +  T GI QLLEKK GI RQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAL+L+YP
Sbjct: 405  RDVAT-GICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYP 463

Query: 4096 ERVTPWNVNKLRHAVINGADIHPGASHYMDKDRLYKLQVSRSMRNAIGRKLPTSRGVTSQ 3917
            ERVTPWNV KLR+A++NG + HPGA+HY DK  + KL     + +   RKLPTSRGV   
Sbjct: 464  ERVTPWNVVKLRNAILNGPESHPGATHYADKVSIVKLPPKGKLLSLTSRKLPTSRGVILH 523

Query: 3916 SGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGEKTLRMHYANCST 3737
             GK  +++FEGKVVYRHL+DGD+VLVNRQPTLHKPS+MAH+VRVL GEKT+RMHYANCST
Sbjct: 524  QGKISDHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHIVRVLKGEKTVRMHYANCST 583

Query: 3736 YNADFDGDEMNVHFPQDEISRAEAMNIVNANKQYIVPTSGDPIRGLIQDHIVSAVLLSKQ 3557
            YNADFDGDE+NVHFPQDEISRAEA NIVNAN QY+ PTSGDPIR LIQDHIVSA LL+K+
Sbjct: 584  YNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLTKK 643

Query: 3556 DTFLTREQYHQLLYASCLPPAVNSLQPGIFGQKVSVLNSDDEIQPIPPAIWKPKPLWTGK 3377
            DTFL+ E+++QLLY+S +  A      G  GQKV + NS+ E+   PPAIWKP+PLWTGK
Sbjct: 644  DTFLSYEEFNQLLYSSGVSMAGLGSFYGKHGQKVFISNSESEMFLFPPAIWKPEPLWTGK 703

Query: 3376 QVITAILCHITRGRSPFTIEKDGRIPKEYF----------------AKDS-KEFSMHIYK 3248
            QVI+A+L +ITRG  PFT EK+ +IP  +F                 KD   E  + IYK
Sbjct: 704  QVISALLYYITRGSPPFTAEKNAKIPSNFFKTQIRKGKRYTEDTSKKKDKPDEDKLLIYK 763

Query: 3247 NEFIHGIIDKAQFGKYGLVHIVHELYGADTAGSLLSIFSRLFTTFLQMHAFTCGVDDLLL 3068
            N+ + G++DKAQFG YG++H V ELYG++ AG+LLS  SRLFTTFLQMH FTCGVDDL+L
Sbjct: 764  NDLVRGVVDKAQFGDYGMIHTVQELYGSNVAGNLLSALSRLFTTFLQMHGFTCGVDDLML 823

Query: 3067 LQEADMGREVMLEKSEAQSGDVHFRFTGTKRGD-IDPLDLCREIEKVVRSNGESATARLD 2891
             +  D+ R   L+  E     VH  F G K  D IDP+ L   IEK +RSNGE+A   LD
Sbjct: 824  TEGKDVERMNQLKSCEIIGDSVHREFIGVKNSDNIDPVTLQLNIEKKIRSNGEAALT-LD 882

Query: 2890 RMMSNSLNVLTSE-VNKALFPAGLQKPFPRNCLSLMTTTGAKGGLVNLTQISSLLGQQEL 2714
            R M+++LN  TS  + K L   G+ KP  +NC+SLMTT+GAKG +VN  QISS LGQQEL
Sbjct: 883  RKMTSNLNSRTSSGILKKLLSEGILKPSGKNCISLMTTSGAKGSMVNFQQISSHLGQQEL 942

Query: 2713 EGKRVPRMISGKTLPSFPPWDTSCRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIK 2534
            EGKRVPRM+SGKTLP FPPWD S RAGGFI DRFLT L PQEYYFHCMAGR+GLVDTA+K
Sbjct: 943  EGKRVPRMVSGKTLPCFPPWDCSPRAGGFIIDRFLTALHPQEYYFHCMAGREGLVDTAVK 1002

Query: 2533 TSRSGYLQRCLIKNLESLKVCYDYTVRDADGSVVQFAYGEDGVDVLKTSYITEVQVLSNN 2354
            TSRSGYLQRCL+KNLE LKVCYD+TVRDADGS++QF YGEDGVDV +TS+ITE   LS N
Sbjct: 1003 TSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSFITEFGALSTN 1062

Query: 2353 QRVVLESLSCQLEDAHLSKSNSFIKELPDSLRERATNLSRQLSKSGSRHQIXXXXXXXXX 2174
            + +V  +   QL+     +S+ +I +LP++L  +A   S+Q    GS  Q          
Sbjct: 1063 KELVFSNYCRQLD-----RSSPYINKLPEALEGKAEKFSKQ-RNLGSMEQ---ADFLRLM 1113

Query: 2173 XXXXXXXLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMSAK 1994
                   LA+PGEPVGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEILM+A 
Sbjct: 1114 EHKYVSCLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAAA 1173

Query: 1993 EAIRTPIMTCPLLDGMTKEDGERFAAKLRRICVADIVESMEVSTVPFYIHKRRVSTLYKL 1814
              I+TP MTCPL    + +D    A KL++I VADI++SM+VS VP  +   +V ++YKL
Sbjct: 1174 RDIKTPFMTCPLRHDKSMKDAICLADKLKKITVADIIKSMKVSVVPVTVLGGQVCSIYKL 1233

Query: 1813 KMKLYPCGLYPPHIDISLEDCRAILRTTFISAMEDAIKKHLDLISRISGIEVVSGKGDNS 1634
             MKLY    YP + DI+L+D    LR  F+  +EDAI+ H+ L+S+ISGI+        S
Sbjct: 1234 VMKLYKSKQYPEYTDITLDDWEETLRVNFVRELEDAIQNHMTLLSKISGIKKFK-TDPQS 1292

Query: 1633 XXXXXXXXXGSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEKRKKQTCDELEYE 1454
                      S                                  A+KRK Q  DE++YE
Sbjct: 1293 NYSNSSEDAHSNGSESEKKGQNNDDDDEDGGGVEDTEGYEDLGSDAQKRKLQGTDEVDYE 1352

Query: 1453 DGMEKQTSVSVDEHDGVSSSGFESEVD--QAEAEEDYEIGGDDPVTVAEEKMPE----DD 1292
            DG E++T      HDG  S   E + D    +A E+Y    D   +   EK  +    D+
Sbjct: 1353 DGPEEET------HDGELSEEIEGDEDGSDVDANENYNNVTDANNSEGLEKPSKSKTIDE 1406

Query: 1291 LGVVADEESPDNPVPXXXXXXXXXXXXXXXKEVDYAIFVEAKGLNFEAHFALSGEHHILL 1112
               +  E+    P                 K+ D AIFVEAKG +FE HF  +GE HILL
Sbjct: 1407 KQNLKREKKKSEPT---------------TKKYDRAIFVEAKGKHFEIHFRFTGEPHILL 1451

Query: 1111 AEIAQKTARRVYVKESKNIDRCSVVEPKRS---------TDRI-----------ALQTAG 992
             +IAQ+TA++V ++    +  C  +  K S           RI           ALQT+G
Sbjct: 1452 TQIAQRTAKKVCIQNFGKVGECKAITCKESGVIYYGKDGRKRIEISASEKEQIPALQTSG 1511

Query: 991  VNFLAFWDLQDDLDINRVVTNDIHAMLNTYGVEAARATIINEVKAVFEPYGIRVNTRHLS 812
            V+F  FW+L+DDLD+  + +N++HAMLN YGVEAAR TII EV+ VF+ YGI VN RHL+
Sbjct: 1512 VHFKTFWELEDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNIRHLT 1571

Query: 811  LIADFMSAHGGYRPMNRIGMMEFNTSPFSKMTFETATRFIVEAAFHGESDVLQSPSASVC 632
            LIADFM+  G YRPMNR G +  +TSPF KM FETA  FIVEAA+HG+ D L++PSA +C
Sbjct: 1572 LIADFMTHTGSYRPMNRTGSIADSTSPFIKMCFETAGNFIVEAAYHGQVDNLETPSARIC 1631

Query: 631  LGQPVKFGTGTFGLLQKL 578
            LG PVK GTG   L+QKL
Sbjct: 1632 LGLPVKMGTGCHDLIQKL 1649


>ref|XP_009790932.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nicotiana
            sylvestris]
          Length = 1681

 Score = 1571 bits (4067), Expect = 0.0
 Identities = 854/1716 (49%), Positives = 1102/1716 (64%), Gaps = 72/1716 (4%)
 Frame = -3

Query: 5509 EAPSEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINETDSCK 5330
            +  SE V+A+ FSF + E+++K SV K+TSP+LLD  G P+P GLYDPA+GP++E   CK
Sbjct: 3    QGASEAVEAVHFSFMTDEEVRKHSVVKVTSPNLLDTLGGPLPGGLYDPAMGPLSERSQCK 62

Query: 5329 TCGLLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQYVAKLE 5150
            +CG     CPGHCGHI+LV P++NPLLF +L NLLQ TCF+C  FR  +++V++ V++LE
Sbjct: 63   SCGQGTVHCPGHCGHIELVSPVFNPLLFNMLHNLLQRTCFYCFHFRASKEEVEKCVSELE 122

Query: 5149 HIARGDVVAAKKTETSLLAEAFSEDEDNGKDIKEKNAGVASC-----ELETDSKDAKQKT 4985
             IA+GDV+  K  +            DN  D +E      SC     +L+  S+  K+ +
Sbjct: 123  LIAKGDVIGPKTMDVL--------SPDNSADREESEGSHMSCTTDDLKLQDRSEYNKRPS 174

Query: 4984 WTSLQYAEAVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLSKTTKDSDIRADFIRGSD 4805
            W + Q+ EA++V+  I+K + +KC+NC   NPKI+ P+FG          I  ++I+ S 
Sbjct: 175  WDNFQFTEAMAVIDRILKTKSEKCSNCETKNPKINKPSFGRFHMDISSKQIIFNYIKKSQ 234

Query: 4804 V----GLSSTAEDKSADANGDGTSQSEEELLAPTNVSEQLRNLPPDFFK--RLYSSAGQK 4643
            +        + E+ S +         E E       S++L N      +    Y    QK
Sbjct: 235  MFNLQRTGGSEENLSPEVVNATEPLGEAETSLSMASSDRLENSMARGRQGDEEYIVMQQK 294

Query: 4642 HL-----LPSEAQLILEGLWRNEAQLCSLICDIQQNNLNVTGKNKAYAMFFLKVLLVPPS 4478
             L     LPS+ + I+E LW NEA+LC+  C+IQ  +LN   K    +MFFL  +LVPP 
Sbjct: 295  DLFSVAHLPSQVRKIIEHLWENEARLCAFFCNIQGQHLNTPSKVAGPSMFFLDSILVPPI 354

Query: 4477 KFRPCAFGGRQVVEHPQNLLLSKVQESNIALQELITSDPDHPNTIRRWMDLQRSVTVLFD 4298
            +FRP A GG  V+EHP  +LL KV +SNIAL    ++       I R MDLQ+SV +LFD
Sbjct: 355  RFRPPAKGGDSVMEHPHTVLLGKVLQSNIALGNAHSNRAGRSKIISRLMDLQQSVNILFD 414

Query: 4297 SSKGLAKSEKDTN-GIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPY 4121
            S       +KD   GI QLLEKK GI RQKMMGKRVNFACRSVISPDPYL+VNEIG+PPY
Sbjct: 415  SKTAAGPGQKDVGVGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGVPPY 474

Query: 4120 FALKLTYPERVTPWNVNKLRHAVINGADIHPGASHYMDKDRLYKLQVS-----RSMRNAI 3956
            FAL+LTYPERVTPWN  K+R ++ING + HPGA  + D+    KL        + +R AI
Sbjct: 475  FALRLTYPERVTPWNAGKMRDSIINGPENHPGALSFADRISTVKLPSGNGKNIKKIRMAI 534

Query: 3955 GRKLPTSRGVTSQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNG 3776
             RKLP+SRG  +QSG+  EY+FEGKVVYRHLQDGDIVLVNRQPTLHKPS+MAHVVRVL G
Sbjct: 535  SRKLPSSRGAVTQSGRNDEYEFEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKG 594

Query: 3775 EKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAMNIVNANKQYIVPTSGDPIRGLI 3596
            EKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEA NIVNAN+QYIVPT GD +RGLI
Sbjct: 595  EKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLI 654

Query: 3595 QDHIVSAVLLSKQDTFLTREQYHQLLYASCLPPAVNSLQPGIFGQKVSVLNSDDEIQPIP 3416
            QDHIV AVLL+ ++TFLT ++++QLLY S +  A      G    KVSV++S+  +Q I 
Sbjct: 655  QDHIVGAVLLTMKNTFLTLQEFNQLLYGSGVFAAGPGSTSGNHSNKVSVVDSEGVVQTIL 714

Query: 3415 PAIWKPKPLWTGKQVITAILCHITRGRSPFTIEKDGRIPKEYFAKDSK------------ 3272
            PA+WKPKPLWTGKQVITA+L H+T+G  P T++  G+IP  YF   S+            
Sbjct: 715  PAVWKPKPLWTGKQVITALLNHLTKGSPPCTVKNKGKIPYPYFLSQSRLAEYQSREEEED 774

Query: 3271 ---EFSMHIYKNEFIHGIIDKAQFGKYGLVHIVHELYGADTAGSLLSIFSRLFTTFLQMH 3101
               E    I+KNE + G+IDKAQFGK+GLVH + ELYGA+ AG LLS  SRLFT FLQ+H
Sbjct: 775  RTAENKFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGANRAGILLSALSRLFTIFLQLH 834

Query: 3100 AFTCGVDDLLLLQEADMGREVMLEKSEAQSGDVHFRFTGTKRGDIDPLDLCREIEKVVRS 2921
             FTCG+DDL++L   D+ R+  LE  +    D H  F   K G+I PL+L  EIEK +  
Sbjct: 835  GFTCGIDDLVILPHYDIRRKEELEGGDV-GEDAHCDFVKFKPGEIGPLELQLEIEKAISG 893

Query: 2920 NGESATARLDRMMSNSLNVLTSEVNKALFPAGLQKPFPRNCLSLMTTTGAKGGLVNLTQI 2741
            N E+ATA LD  M N L    S+ NK L   GL KPFPRNC++LMT TGAKG  VN  QI
Sbjct: 894  NKEAATAALDMKMKNKLANKGSQFNKELLLKGLLKPFPRNCIALMTITGAKGSTVNFQQI 953

Query: 2740 SSLLGQQELEGKRVPRMISGKTLPSFPPWDTSCRAGGFISDRFLTGLRPQEYYFHCMAGR 2561
            SS LGQQELEGKRVPRM+SGKTLP FPPWD + RAGG++SDRFL+GLRPQEYYFHCMAGR
Sbjct: 954  SSYLGQQELEGKRVPRMVSGKTLPCFPPWDFASRAGGYVSDRFLSGLRPQEYYFHCMAGR 1013

Query: 2560 DGLVDTAIKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSVVQFAYGEDGVDVLKTSYI 2381
            +GLVDTA+KTSRSGYLQRCLIKNLESLKVCYDYTVRDADGS++QF YGEDGVDV +TS++
Sbjct: 1014 EGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVHRTSFL 1073

Query: 2380 TEVQVLSNNQRVVLESLSCQLEDAHLSKSNSFIKELPDSLRE--------RATNLSRQLS 2225
               + L +NQ  + + L          K NS+I+ LPD L E        +   L ++L 
Sbjct: 1074 KNFKALKDNQETICQKL------RQGRKLNSYIERLPDGLEEKVKQFWGKKTKKLEKKLE 1127

Query: 2224 KSGSRHQI------XXXXXXXXXXXXXXXXLAEPGEPVGVIAAQSVGEPSTQMTLNTFHL 2063
            K   + +I                      LA+ GEPVGV+A QSVGEPSTQMTLNTFHL
Sbjct: 1128 KRVKKEEISKQLKKEEVDFLELVGQKYFSSLADSGEPVGVLAGQSVGEPSTQMTLNTFHL 1187

Query: 2062 AGRGEMNVTLGIPRLQEILMSAKEAIRTPIMTCPLLDGMTKEDGERFAAKLRRICVADIV 1883
            AGRGEMNVTLGIPRLQEILM+A +AI+TPIMTCP L   +K+D +   A++++I VAD++
Sbjct: 1188 AGRGEMNVTLGIPRLQEILMTASDAIKTPIMTCPFLGWKSKDDAQSLLAEVKKITVADMI 1247

Query: 1882 ESMEVSTVPFYIHKRRVSTLYKLKMKLYPCGLYPPHIDISLEDCRAILRTTFISAMEDAI 1703
            ESMEV+ +P  I+  +VS LYKL +KL        H  +S EDC   L+  F+  +EDAI
Sbjct: 1248 ESMEVNLLPLSIYNHQVSQLYKLTVKL------KEHEFVSSEDCDYTLKYVFLRELEDAI 1301

Query: 1702 KKHLDLISRISGIEVVSGKGDNSXXXXXXXXXGSKSXXXXXXXXXXXXXXXXXXXXXXXX 1523
            + HL L+S+I+GI+      D+            ++                        
Sbjct: 1302 ESHLALLSKINGIKNFKSSSDS--------VASHETEENASSTRYEEHMLDDDDEAEDER 1353

Query: 1522 XXXXXXXXAEKRKKQTCDELEYEDGMEKQTSVSVDEHDGVSSSGFESEVDQAEAEEDYEI 1343
                    A+KRK+QT DE++Y+DG E          D  S +   +EV+  ++++ +EI
Sbjct: 1354 TEEDLSSDAQKRKQQTTDEMDYDDGPE----------DEASEAETTAEVEDEKSDQAHEI 1403

Query: 1342 GGDDPVTVAEEKMPEDDLGVVADEES--PDNPVPXXXXXXXXXXXXXXXKEVDYAIFVEA 1169
            G  D     +    E    + ++E +                       K+ D ++F+  
Sbjct: 1404 GNRDEEETGDHGNEEQTSKLYSEESNIKTAKSKTKTTVQQKKKKETRSKKDSDRSVFIAV 1463

Query: 1168 KGLNFEAHFALSGEHHILLAEIAQKTARRVYVKESKNIDRCSVVEPKRSTDRI------- 1010
            +GL+FE HF    E HILLA++AQKTA++VY+K +  ID+C +V+   S + +       
Sbjct: 1464 EGLHFEVHFRFVNEPHILLAQVAQKTAKKVYIKNAGKIDQCRMVKYDVSENTVMWDEKQT 1523

Query: 1009 ------------ALQTAGVNFLAFWDLQDDLDINRVVTNDIHAMLNTYGVEAARATIINE 866
                        AL+ AGV+F  FW++QDDLD+NR+ TN+I +MLNTYGVEAARA II E
Sbjct: 1524 KNQSQDTDSAYWALKAAGVDFGTFWEMQDDLDVNRIYTNNIRSMLNTYGVEAARAAIIRE 1583

Query: 865  VKAVFEPYGIRVNTRHLSLIADFMSAHGGYRPMNRIGMMEFNTSPFSKMTFETATRFIVE 686
            VK VF  YG+ ++ RHLSLIAD+M+  GGY+PM+R G +  + SPF KM+FETA++FIVE
Sbjct: 1584 VKTVFGIYGVEIDFRHLSLIADYMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVE 1643

Query: 685  AAFHGESDVLQSPSASVCLGQPVKFGTGTFGLLQKL 578
            AA HG +D L++PS+ +CLG PVK GTG F ++QKL
Sbjct: 1644 AASHGLTDNLETPSSRICLGLPVKMGTGCFDIMQKL 1679


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score = 1569 bits (4063), Expect = 0.0
 Identities = 859/1712 (50%), Positives = 1105/1712 (64%), Gaps = 67/1712 (3%)
 Frame = -3

Query: 5512 NEAPSEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINETDSC 5333
            N+  SE V+A+ FSF + E++++ SV K+TSP+LLD   +PVPNGLYDPA+GP++    C
Sbjct: 2    NQGASEAVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQC 61

Query: 5332 KTCGLLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQYVAKL 5153
            K C      C GHCGHI+LV P+YNPLLF +L NLLQ TCF+C  FR    +V++ V++L
Sbjct: 62   KFC--CQSNCSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSEL 119

Query: 5152 EHIARGDVVAAKKTETSLLAEAFSEDEDNGKDIKEKNAGVASCELET----DSKDA-KQK 4988
            E IA+GDVV AK      + +A S D  N  D +E      SC ++     D ++  K+ 
Sbjct: 120  ELIAKGDVVGAK------MIDALSPD--NSTDREESEGSHMSCAMDDLNMQDHREYNKRP 171

Query: 4987 TWTSLQYAEAVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLSKTTKDSDIRADFIR-G 4811
            +W + Q+ EA++V+  I+K + +KC+NC   NPKI  P+FG       +  IR ++I  G
Sbjct: 172  SWDNFQFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMDISNKQIRENYINSG 231

Query: 4810 SDVGLSSTA---EDKSADANGDGTSQSEEELLAPTNVSEQLRNLPP---------DFFKR 4667
                L  T    E+ S +         E E       ++ + N            D  ++
Sbjct: 232  RRFNLHDTGGSEENPSPEVVNATEPLGEAETSLCVTSTDGVENSKARKRQGGDQSDVVEQ 291

Query: 4666 LYSSAGQKHLLPSEAQLILEGLWRNEAQLCSLICDIQQNNLNVTGKNKAYAMFFLKVLLV 4487
               S    HL PS+ + I+E LW NEA LC+  CDIQ  + N +GK    +MFFL  +LV
Sbjct: 292  QKDSFSVAHL-PSQVRSIIEHLWENEAPLCTFFCDIQSQHHNTSGKVAGPSMFFLDSILV 350

Query: 4486 PPSKFRPCAFGGRQVVEHPQNLLLSKVQESNIALQELITSDPDHPNTIRRWMDLQRSVTV 4307
            PP KFRP A GG  ++EHP  +LL KV ++NIAL     +       I R MDLQ+SV V
Sbjct: 351  PPIKFRPPAKGGDSIMEHPHTVLLGKVVQANIALGNAHINRAGRSKIISRLMDLQQSVNV 410

Query: 4306 LFDSSKGLAKSEKDT-NGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGI 4130
            LFDS       +KD  +GI Q+LEKK GI RQKMMGKRVNFACRSVISPDPYL+VNEIGI
Sbjct: 411  LFDSKTASGPGQKDVGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGI 470

Query: 4129 PPYFALKLTYPERVTPWNVNKLRHAVINGADIHPGASHYMDKDRLYKLQVSRSMRNAIGR 3950
            PPYFAL+LTYPER+TPWN  K+R AVING + HPGA  + D+    KL  ++ MR AI R
Sbjct: 471  PPYFALRLTYPERLTPWNAVKMRDAVINGPENHPGAVSFADRIATVKLPSNKKMRVAISR 530

Query: 3949 KLPTSRGVTSQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGEK 3770
            KLP+SRG  +QSG+  EY+FEGKVVYRHLQDGD+VLVNRQPTLHKPS+MAHVVRVL GEK
Sbjct: 531  KLPSSRGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEK 590

Query: 3769 TLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAMNIVNANKQYIVPTSGDPIRGLIQD 3590
            TLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEA NIVNAN+QYIVPT GD +RGLIQD
Sbjct: 591  TLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQD 650

Query: 3589 HIVSAVLLSKQDTFLTREQYHQLLYASCLPPAVNSLQPGIFGQKVSVLNSDDEIQPIPPA 3410
            HIV AV+L+ ++TFLT  +++QLLY S +  A  +   G    KVSV++ +  +Q + PA
Sbjct: 651  HIVGAVILTMKNTFLTLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSVVDFEGVVQTVLPA 710

Query: 3409 IWKPKPLWTGKQVITAILCHITRGRSPFTIEKDGRIPKEYFAKDSK-------------- 3272
            +WKPKPLWTGKQVITA+L H+T+G +P T++  G+IP  YF  +S+              
Sbjct: 711  VWKPKPLWTGKQVITALLNHLTKGCAPCTVKNKGKIPYPYFLSESRLVEYQSREEQEDRT 770

Query: 3271 -EFSMHIYKNEFIHGIIDKAQFGKYGLVHIVHELYGADTAGSLLSIFSRLFTTFLQMHAF 3095
             E    I+KNE + G+IDKAQFGK+GLVH + ELYG++ AG LLS  SRLFT FLQ+H F
Sbjct: 771  AENEFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFTIFLQLHGF 830

Query: 3094 TCGVDDLLLLQEADMGREVMLEKSEAQSGDVHFRFTGTKRGDIDPLDLCREIEKVVRSNG 2915
            TCGVDDL++L   D+ R+  LE  +    + H  F   KRG+I PL+L  EIEK + SN 
Sbjct: 831  TCGVDDLVILPHYDIRRKEELEGDDV-GEEAHCDFVKFKRGEIGPLELQLEIEKAMSSNK 889

Query: 2914 ESATARLDRMMSNSLNVLTSEVNKALFPAGLQKPFPRNCLSLMTTTGAKGGLVNLTQISS 2735
            E+ATA LD  M N L    S+ NK L   GL KPFPRNC++LMT TGAKG  VN  QISS
Sbjct: 890  EAATAALDMKMKNKLANKGSQFNKELLLKGLLKPFPRNCIALMTITGAKGSTVNFQQISS 949

Query: 2734 LLGQQELEGKRVPRMISGKTLPSFPPWDTSCRAGGFISDRFLTGLRPQEYYFHCMAGRDG 2555
             LGQQELEGKRVPRM+SGKTLP FPPWD + RAGG++SDRFL+GLRPQEYYFHCMAGR+G
Sbjct: 950  YLGQQELEGKRVPRMVSGKTLPCFPPWDCASRAGGYVSDRFLSGLRPQEYYFHCMAGREG 1009

Query: 2554 LVDTAIKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSVVQFAYGEDGVDVLKTSYITE 2375
            LVDTA+KTSRSGYLQRCLIKNLESLKVCYDYTVRDADGS++QF YGEDGVDV +TS++  
Sbjct: 1010 LVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVHRTSFLKN 1069

Query: 2374 VQVLSNNQRVVLESLSCQLEDAHLSKSNSFIKELPDSLRE--------RATNLSRQLSKS 2219
             + L NNQ  + + L       H  K NS+I++LPD L E        R   L ++L K 
Sbjct: 1070 FKALKNNQETICQKL------RHGRKLNSYIEKLPDGLEEKVKHFWEKRTKKLEKKLGKL 1123

Query: 2218 GSRHQI------XXXXXXXXXXXXXXXXLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAG 2057
              + ++                      LA+ GEPVGV+A QSVGEPSTQMTLNTFHLAG
Sbjct: 1124 VKKEEMVKQLKEEEADFLELVRQKYFSSLADSGEPVGVLAGQSVGEPSTQMTLNTFHLAG 1183

Query: 2056 RGEMNVTLGIPRLQEILMSAKEAIRTPIMTCPLLDGMTKEDGERFAAKLRRICVADIVES 1877
            RGEMNVTLGIPRLQEILM+A EAI+TPI+TCP L   +K D +   AK+++I VAD++ES
Sbjct: 1184 RGEMNVTLGIPRLQEILMTASEAIKTPILTCPFLGWQSKNDAQSLLAKVKKITVADMIES 1243

Query: 1876 MEVSTVPFYIHKRRVSTLYKLKMKLYPCGLYPPHIDISLEDCRAILRTTFISAMEDAIKK 1697
            MEV  +P  I+  +VS LYKL +KL        H  +S EDC   L+  F+  +EDAI+ 
Sbjct: 1244 MEVKLLPLSIYNHQVSQLYKLTVKL------KKHDFVSSEDCEYTLKFVFLRELEDAIES 1297

Query: 1696 HLDLISRISGIEVVSGKGDNSXXXXXXXXXGSKSXXXXXXXXXXXXXXXXXXXXXXXXXX 1517
            HL L+S+I+GI+      ++             S                          
Sbjct: 1298 HLALLSKINGIQNFKTSSES-----------VDSDETEENASSTRHEEEMLDDEDEDERT 1346

Query: 1516 XXXXXXAEKRKKQTCDELEYEDGMEKQTSVSVDEHDGVSSSGFESEVDQAEAEEDYEIGG 1337
                  A+KRK+QT DE++Y+D   +  + +  E +   S   + E+D  + EE    G 
Sbjct: 1347 EDLSSDAQKRKQQTTDEMDYDDDENEDEAETTAEIEDEKSEQTD-EIDNGDEEEIGNRGN 1405

Query: 1336 DDPVTVAEEKMPEDDLGVVADEESPDNPVPXXXXXXXXXXXXXXXKEVDYAIFVEAKGLN 1157
            ++ ++  +    EDD+      +S                     K+ D  +FV+ +GL+
Sbjct: 1406 EEQMSKLQS--TEDDISNTKSSKSKTK--TKTTVKQNKKKERRSKKDSDRCVFVDVEGLH 1461

Query: 1156 FEAHFALSGEHHILLAEIAQKTARRVYVKESKNIDRCSVVEPKRSTDRI----------- 1010
            FE HF    E HILLA++AQKTA++VY+K S  ID+C +V+ + + + +           
Sbjct: 1462 FEVHFRFVNEPHILLAQVAQKTAKKVYIKNSGKIDQCRMVKYEVTENTVMWDEYQTKQQS 1521

Query: 1009 --------ALQTAGVNFLAFWDLQDDLDINRVVTNDIHAMLNTYGVEAARATIINEVKAV 854
                    AL+ AGV+F  FW++QDDLD+ R+ TN+I AMLNTYGVEAARA+I+ EVK V
Sbjct: 1522 QDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARASILREVKTV 1581

Query: 853  FEPYGIRVNTRHLSLIADFMSAHGGYRPMNRIGMMEFNTSPFSKMTFETATRFIVEAAFH 674
            F  YG+ ++ RHLSLIADFM+  GGY+PM+R G +  + SPF KM+FETA++FIVEAA H
Sbjct: 1582 FGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVEAAAH 1641

Query: 673  GESDVLQSPSASVCLGQPVKFGTGTFGLLQKL 578
            G +D L++PS+ +CLG PVK GTG F ++QKL
Sbjct: 1642 GLTDNLETPSSRICLGLPVKMGTGCFDIMQKL 1673


>ref|XP_010036455.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X1
            [Eucalyptus grandis]
          Length = 1669

 Score = 1556 bits (4028), Expect = 0.0
 Identities = 868/1727 (50%), Positives = 1122/1727 (64%), Gaps = 78/1727 (4%)
 Frame = -3

Query: 5524 MAVANEAPSEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINE 5345
            MA A E  SE V++++F F + E+++K S  K+T+  LLD    PV  GLYDPA+G +N+
Sbjct: 1    MATA-EGVSEFVESVRFGFLTDEEVRKQSCVKVTNTVLLDNVERPVAGGLYDPAMGTLND 59

Query: 5344 TDSCKTCGLLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQY 5165
            T +CK+CG  ++ CPGHCGHIDLV P+YNPLLF  L NLL+ TCF C  FR    +V   
Sbjct: 60   TTACKSCGQRSFNCPGHCGHIDLVSPVYNPLLFNTLYNLLKRTCFFCFHFRESRSQVDAC 119

Query: 5164 VAKLEHIARGDVVAAKKTETSLLAEAFSEDEDNGKDIKEKNAGVASCELETDSK-DAKQK 4988
            V+KLE IA+GDV  AK+ ++     +   +  NG D+   +      +L+ DS    KQ 
Sbjct: 120  VSKLELIAKGDVAGAKELDSKWATNSSLREASNGGDV---SCSTVRSDLQHDSPVHQKQG 176

Query: 4987 TWTSLQYAEAVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLSKT-TKDSDIRADFIRG 4811
             WTSLQ+ EA+SVL+  +K  +K+C NC   NPKIS PTFGW   +    +  R + IRG
Sbjct: 177  EWTSLQFNEAMSVLNKFLKPTYKECKNCKAKNPKISKPTFGWFHMSGMTGAQTRGNIIRG 236

Query: 4810 SDVG---LSSTAEDKSADA---NGDGTSQSEEE---LLAPTNVS--------EQLRNLPP 4682
            + +    L    E +S +      DG +++E +     +P  +          +  +L  
Sbjct: 237  NKMDGPFLDGDGEMESLEGAFLQDDGGNEAETQSSTFASPDGIGIAKKGQKKRKGHSLSD 296

Query: 4681 DFFKRLYSSAGQKHLLPSEAQLILEGLWRNEAQLCSLICDIQQNNLNVTGKNKAYAMFFL 4502
            ++ K+    +G   LLPSE + I++ LW NEA LCS I DIQQ     +G +  ++MFFL
Sbjct: 297  EYIKQKNFFSGP--LLPSEVKEIMKLLWENEAPLCSFISDIQQQG---SGNSATHSMFFL 351

Query: 4501 KVLLVPPSKFRPCAFGGRQVVEHPQNLLLSKVQESNIALQELITSDPDHPNTIRRWMDLQ 4322
              +LVPP KFRP + GG  V+EHP  +LL+KV ++NI+L     S+      I RWMDLQ
Sbjct: 352  GTVLVPPIKFRPPSKGGDSVMEHPHTVLLAKVLQANISLGNAHQSN--RATIISRWMDLQ 409

Query: 4321 RSVTVLFDSSKGLAKSEKDT-NGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAV 4145
            +S+ +LFDS     +  +D  +GI QLLEKK G+ RQ MMGKRVN+ACRSVISPDPYLAV
Sbjct: 410  QSINLLFDSKTATGQGRRDVASGICQLLEKKEGMFRQNMMGKRVNYACRSVISPDPYLAV 469

Query: 4144 NEIGIPPYFALKLTYPERVTPWNVNKLRHAVINGADIHPGASHYMDKDRLYKLQVSRSMR 3965
            NEIGIPPYFAL+LTYPERVTPWN   LR A+INGAD HPGA+HY+DK    KL  +R  R
Sbjct: 470  NEIGIPPYFALRLTYPERVTPWNTVSLRKAIINGADTHPGATHYIDKLSTLKLPPARKGR 529

Query: 3964 NAIGRKLPTSRGVTSQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRV 3785
             +I R+LP+SRGV +Q+G+  + + EGK+VYRHL+DGDIVLVNRQPTLHKPS+MAHVVRV
Sbjct: 530  ISISRRLPSSRGVVTQAGRSSDNEVEGKIVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRV 589

Query: 3784 LNGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAMNIVNANKQYIVPTSGDPIR 3605
            L GEKTLRMHYANCSTYNADFDGDEMNVHFPQD+ISRAEA NIVNAN QY+ PT+G PIR
Sbjct: 590  LKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDDISRAEAYNIVNANNQYVKPTNGSPIR 649

Query: 3604 GLIQDHIVSAVLLSKQDTFLTREQYHQLLYASCLPPAVNSLQPGIF---GQKVSVLNSDD 3434
             LIQDHIVSA +L+K+DTFL  ++++ LLY+S     V++   G F   G+KV++   D+
Sbjct: 650  ALIQDHIVSAAILTKKDTFLNYDEFNHLLYSS----GVSAAGSGSFRKLGKKVAINFEDN 705

Query: 3433 EIQPIPPAIWKPKPLWTGKQVITAILCHITRGRSPFTIEKDGRIPKEYFAKDSK------ 3272
             + P+ PAIWKP+PLWTGKQ+I A+L H+TRG  PFT+EK G+IP ++F +  K      
Sbjct: 706  LLSPV-PAIWKPEPLWTGKQLIGAVLDHLTRGYPPFTVEKQGKIPSDFFKRKLKHKPSKR 764

Query: 3271 ----------------EFSMHIYKNEFIHGIIDKAQFGKYGLVHIVHELYGADTAGSLLS 3140
                            E ++ I+KN  I G+IDKAQFG YGLVH   ELYG++ AG LLS
Sbjct: 765  KGTNKDKERERNEEPGEDTVLIFKNYLICGVIDKAQFGDYGLVHTFQELYGSNAAGILLS 824

Query: 3139 IFSRLFTTFLQMHAFTCGVDDLLLLQEADMGREVMLEKSEAQSGDVHFRFTGTKRGDIDP 2960
             FSRLFT FLQ+H FTCGVDDLLL ++ D  R+  LE+ E    +VH    G     IDP
Sbjct: 825  AFSRLFTAFLQLHGFTCGVDDLLLSKDIDEKRQQQLEECENCGEEVHCEVVGV-NDFIDP 883

Query: 2959 LDLCREIEKVVRSNGESATARLDRMMSNSLNVLTS-EVNKALFPAGLQKPFPRNCLSLMT 2783
             +L  +IE+V+RSNG+SA   LDR M + LN L+S ++ K L   GL KP  +NC+SLMT
Sbjct: 884  AELQLKIEEVIRSNGDSALTNLDRRMISRLNELSSKKIEKNLLSEGLFKPTGKNCISLMT 943

Query: 2782 TTGAKGGLVNLTQISSLLGQQELEGKRVPRMISGKTLPSFPPWDTSCRAGGFISDRFLTG 2603
            T+GAKGG  N  QISS LGQQELEG+RVPRM+SGKTLP FPPWD + RAGGFI DRFLTG
Sbjct: 944  TSGAKGGTANFQQISSHLGQQELEGRRVPRMVSGKTLPCFPPWDWASRAGGFIIDRFLTG 1003

Query: 2602 LRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSVVQFA 2423
            LRPQEYYFHCMAGR+GLVDTA+KTSRSGYLQRCL+KNLE LKV YD+TVRDADGS+VQF 
Sbjct: 1004 LRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLECLKVSYDHTVRDADGSIVQFY 1063

Query: 2422 YGEDGVDVLKTSYITEVQVLSNNQRVVLESLSCQLEDAHLSKSNSFIKELPDSLRERATN 2243
            YGEDG+DV KTS++ +   L  N  ++    S +L      KSNS+I +LP++L+++A  
Sbjct: 1064 YGEDGIDVHKTSFVAKFDALLANHDIMKAKYSTELR-----KSNSYITDLPEALKDKANK 1118

Query: 2242 L--SRQLS--KSGSRHQIXXXXXXXXXXXXXXXXLAEPGEPVGVIAAQSVGEPSTQMTLN 2075
                R LS  +      +                LA+PGEPVG++AAQSVGEPSTQMTLN
Sbjct: 1119 FICDRNLSVPRLARNEILKPEDFVKSVEQKYFSSLAQPGEPVGIVAAQSVGEPSTQMTLN 1178

Query: 2074 TFHLAGRGEMNVTLGIPRLQEILMSAKEAIRTPIMTCPLLDGMTKEDGERFAAKLRRICV 1895
            TFH AGRGEMNVTLGIPRLQEILM+A   I+TPIMTCPL  G +K+D    A KL++I V
Sbjct: 1179 TFHHAGRGEMNVTLGIPRLQEILMTASTDIKTPIMTCPLWRGRSKQDANSLAEKLKKITV 1238

Query: 1894 ADIVESMEVSTVPFYIHKRRVSTLYKLKMKLYPCGLYPPHIDISLEDCRAILRTTFISAM 1715
            A+++ESMEV+ VPF ++  +V ++YKLKMKL    ++      S++ C  IL   ++  +
Sbjct: 1239 AEMIESMEVAVVPFAVNNHQVCSIYKLKMKLKRPKVF------SVKHCEEILEVVYLREL 1292

Query: 1714 EDAIKKHLDLISRISGIE-VVSGKGDNSXXXXXXXXXGSKSXXXXXXXXXXXXXXXXXXX 1538
            EDAI+ HL L+S+ISGI+   S + D             ++                   
Sbjct: 1293 EDAIQNHLLLLSKISGIKNFTSSETDEDASGSASQHAEERT-----------VDDDADDG 1341

Query: 1537 XXXXXXXXXXXXXAEKRKKQTCDELEYEDGMEKQTSVSVDEHDGVSSSGFESEVDQAEAE 1358
                          +KRK+Q  DE+EYEDG E+      + ++   S+G ES+ DQA   
Sbjct: 1342 DDDGNDNDDLGFDGQKRKRQATDEMEYEDGYEE------ERNEPELSAGLESDGDQA--- 1392

Query: 1357 EDYEIG--GDDPVTVAEE-----KMPEDDLGVVADEESPDNPVPXXXXXXXXXXXXXXXK 1199
             D +IG  GD P  +A E     K  +      +D+E                      K
Sbjct: 1393 NDVDIGEDGDGPPGIAPEIVSPSKTKKSKKNAKSDDEGKKR------------VRTKVIK 1440

Query: 1198 EVDYAIFVEAKGLNFEAHFALSGEHHILLAEIAQKTARRVYVKESKNIDRCSVV------ 1037
            E D AIFV A GL+FE HF  + E H+LL +IAQK A++VY++ S  I+ C V+      
Sbjct: 1441 EFDRAIFVAANGLDFEVHFRFTNEPHVLLGQIAQKVAKKVYLRSSGKIESCQVITCKENQ 1500

Query: 1036 ------EPKR-----STDR---IALQTAGVNFLAFWDLQDDLDINRVVTNDIHAMLNTYG 899
                  +PKR     + D+    A+ T G +F A W +QD LDI  + +NDIHAML TYG
Sbjct: 1501 VIYYGEDPKRRQKIEAKDKEAIPAINTNGADFCALWQMQDQLDIRYIYSNDIHAMLTTYG 1560

Query: 898  VEAARATIINEVKAVFEPYGIRVNTRHLSLIADFMSAHGGYRPMNRIGMMEFNTSPFSKM 719
            VEAAR TII EV+ VF  YGI V+ RHL+LIADFM+  GGYRPMNR+G +  + SPFSKM
Sbjct: 1561 VEAARETIIREVQNVFGSYGISVDMRHLTLIADFMTHAGGYRPMNRLGGIAESISPFSKM 1620

Query: 718  TFETATRFIVEAAFHGESDVLQSPSASVCLGQPVKFGTGTFGLLQKL 578
            +FETA++FIV+AA+HG  D L++PSA +CLG P+K GTG+F LLQK+
Sbjct: 1621 SFETASKFIVDAAYHGVVDNLETPSARICLGLPMKMGTGSFDLLQKI 1667


>ref|XP_010036456.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X2
            [Eucalyptus grandis]
          Length = 1669

 Score = 1555 bits (4027), Expect = 0.0
 Identities = 865/1722 (50%), Positives = 1119/1722 (64%), Gaps = 78/1722 (4%)
 Frame = -3

Query: 5509 EAPSEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINETDSCK 5330
            E  SE V++++F F + E+++K S  K+T+  LLD    PV  GLYDPA+G +N+T +CK
Sbjct: 5    EGVSEFVESVRFGFLTDEEVRKQSCVKVTNTVLLDNVERPVAGGLYDPAMGTLNDTTACK 64

Query: 5329 TCGLLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQYVAKLE 5150
            +CG  ++ CPGHCGHIDLV P+YNPLLF  L NLL+ TCF C  FR    +V   V+KLE
Sbjct: 65   SCGQRSFNCPGHCGHIDLVSPVYNPLLFNTLYNLLKRTCFFCFHFRESRSQVDACVSKLE 124

Query: 5149 HIARGDVVAAKKTETSLLAEAFSEDEDNGKDIKEKNAGVASCELETDSK-DAKQKTWTSL 4973
             IA+GDV  AK+ ++     +   +  NG D+   +      +L+ DS    KQ  WTSL
Sbjct: 125  LIAKGDVAGAKELDSKWATNSSLREASNGGDV---SCSTVRSDLQHDSPVHQKQGEWTSL 181

Query: 4972 QYAEAVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLSKT-TKDSDIRADFIRGSDVG- 4799
            Q+ EA+SVL+  +K  +K+C NC   NPKIS PTFGW   +    +  R + IRG+ +  
Sbjct: 182  QFNEAMSVLNKFLKPTYKECKNCKAKNPKISKPTFGWFHMSGMTGAQTRGNIIRGNKMDG 241

Query: 4798 --LSSTAEDKSADA---NGDGTSQSEEE---LLAPTNVS--------EQLRNLPPDFFKR 4667
              L    E +S +      DG +++E +     +P  +          +  +L  ++ K+
Sbjct: 242  PFLDGDGEMESLEGAFLQDDGGNEAETQSSTFASPDGIGIAKKGQKKRKGHSLSDEYIKQ 301

Query: 4666 LYSSAGQKHLLPSEAQLILEGLWRNEAQLCSLICDIQQNNLNVTGKNKAYAMFFLKVLLV 4487
                +G   LLPSE + I++ LW NEA LCS I DIQQ     +G +  ++MFFL  +LV
Sbjct: 302  KNFFSGP--LLPSEVKEIMKLLWENEAPLCSFISDIQQQG---SGNSATHSMFFLGTVLV 356

Query: 4486 PPSKFRPCAFGGRQVVEHPQNLLLSKVQESNIALQELITSDPDHPNTIRRWMDLQRSVTV 4307
            PP KFRP + GG  V+EHP  +LL+KV ++NI+L     S+      I RWMDLQ+S+ +
Sbjct: 357  PPIKFRPPSKGGDSVMEHPHTVLLAKVLQANISLGNAHQSN--RATIISRWMDLQQSINL 414

Query: 4306 LFDSSKGLAKSEKDT-NGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGI 4130
            LFDS     +  +D  +GI QLLEKK G+ RQ MMGKRVN+ACRSVISPDPYLAVNEIGI
Sbjct: 415  LFDSKTATGQGRRDVASGICQLLEKKEGMFRQNMMGKRVNYACRSVISPDPYLAVNEIGI 474

Query: 4129 PPYFALKLTYPERVTPWNVNKLRHAVINGADIHPGASHYMDKDRLYKLQVSRSMRNAIGR 3950
            PPYFAL+LTYPERVTPWN   LR A+INGAD HPGA+HY+DK    KL  +R  R +I R
Sbjct: 475  PPYFALRLTYPERVTPWNTVSLRKAIINGADTHPGATHYIDKLSTLKLPPARKGRISISR 534

Query: 3949 KLPTSRGVTSQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGEK 3770
            +LP+SRGV +Q+G+  + + EGK+VYRHL+DGDIVLVNRQPTLHKPS+MAHVVRVL GEK
Sbjct: 535  RLPSSRGVVTQAGRSSDNEVEGKIVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEK 594

Query: 3769 TLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAMNIVNANKQYIVPTSGDPIRGLIQD 3590
            TLRMHYANCSTYNADFDGDEMNVHFPQD+ISRAEA NIVNAN QY+ PT+G PIR LIQD
Sbjct: 595  TLRMHYANCSTYNADFDGDEMNVHFPQDDISRAEAYNIVNANNQYVKPTNGSPIRALIQD 654

Query: 3589 HIVSAVLLSKQDTFLTREQYHQLLYASCLPPAVNSLQPGIF---GQKVSVLNSDDEIQPI 3419
            HIVSA +L+K+DTFL  ++++ LLY+S     V++   G F   G+KV++   D+ + P+
Sbjct: 655  HIVSAAILTKKDTFLNYDEFNHLLYSS----GVSAAGSGSFRKLGKKVAINFEDNLLSPV 710

Query: 3418 PPAIWKPKPLWTGKQVITAILCHITRGRSPFTIEKDGRIPKEYFAKDSK----------- 3272
             PAIWKP+PLWTGKQ+I A+L H+TRG  PFT+EK G+IP ++F +  K           
Sbjct: 711  -PAIWKPEPLWTGKQLIGAVLDHLTRGYPPFTVEKQGKIPSDFFKRKLKHKPSKRKGTNK 769

Query: 3271 -----------EFSMHIYKNEFIHGIIDKAQFGKYGLVHIVHELYGADTAGSLLSIFSRL 3125
                       E ++ I+KN  I G+IDKAQFG YGLVH   ELYG++ AG LLS FSRL
Sbjct: 770  DKERERNEEPGEDTVLIFKNYLICGVIDKAQFGDYGLVHTFQELYGSNAAGILLSAFSRL 829

Query: 3124 FTTFLQMHAFTCGVDDLLLLQEADMGREVMLEKSEAQSGDVHFRFTGTKRGDIDPLDLCR 2945
            FT FLQ+H FTCGVDDLLL ++ D  R+  LE+ E    +VH    G     IDP +L  
Sbjct: 830  FTAFLQLHGFTCGVDDLLLSKDIDEKRQQQLEECENCGEEVHCEVVGV-NDFIDPAELQL 888

Query: 2944 EIEKVVRSNGESATARLDRMMSNSLNVLTS-EVNKALFPAGLQKPFPRNCLSLMTTTGAK 2768
            +IE+V+RSNG+SA   LDR M + LN L+S ++ K L   GL KP  +NC+SLMTT+GAK
Sbjct: 889  KIEEVIRSNGDSALTNLDRRMISRLNELSSKKIEKNLLSEGLFKPTGKNCISLMTTSGAK 948

Query: 2767 GGLVNLTQISSLLGQQELEGKRVPRMISGKTLPSFPPWDTSCRAGGFISDRFLTGLRPQE 2588
            GG  N  QISS LGQQELEG+RVPRM+SGKTLP FPPWD + RAGGFI DRFLTGLRPQE
Sbjct: 949  GGTANFQQISSHLGQQELEGRRVPRMVSGKTLPCFPPWDWASRAGGFIIDRFLTGLRPQE 1008

Query: 2587 YYFHCMAGRDGLVDTAIKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSVVQFAYGEDG 2408
            YYFHCMAGR+GLVDTA+KTSRSGYLQRCL+KNLE LKV YD+TVRDADGS+VQF YGEDG
Sbjct: 1009 YYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLECLKVSYDHTVRDADGSIVQFYYGEDG 1068

Query: 2407 VDVLKTSYITEVQVLSNNQRVVLESLSCQLEDAHLSKSNSFIKELPDSLRERATNL--SR 2234
            +DV KTS++ +   L  N  ++    S +L      KSNS+I +LP++L+++A      R
Sbjct: 1069 IDVHKTSFVAKFDALLANHDIMKAKYSTELR-----KSNSYITDLPEALKDKANKFICDR 1123

Query: 2233 QLS--KSGSRHQIXXXXXXXXXXXXXXXXLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLA 2060
             LS  +      +                LA+PGEPVG++AAQSVGEPSTQMTLNTFH A
Sbjct: 1124 NLSVPRLARNEILKPEDFVKSVEQKYFSSLAQPGEPVGIVAAQSVGEPSTQMTLNTFHHA 1183

Query: 2059 GRGEMNVTLGIPRLQEILMSAKEAIRTPIMTCPLLDGMTKEDGERFAAKLRRICVADIVE 1880
            GRGEMNVTLGIPRLQEILM+A   I+TPIMTCPL  G +K+D    A KL++I VA+++E
Sbjct: 1184 GRGEMNVTLGIPRLQEILMTASTDIKTPIMTCPLWRGRSKQDANSLAEKLKKITVAEMIE 1243

Query: 1879 SMEVSTVPFYIHKRRVSTLYKLKMKLYPCGLYPPHIDISLEDCRAILRTTFISAMEDAIK 1700
            SMEV+ VPF ++  +V ++YKLKMKL    ++      S++ C  IL   ++  +EDAI+
Sbjct: 1244 SMEVAVVPFAVNNHQVCSIYKLKMKLKRPKVF------SVKHCEEILEVVYLRELEDAIQ 1297

Query: 1699 KHLDLISRISGIE-VVSGKGDNSXXXXXXXXXGSKSXXXXXXXXXXXXXXXXXXXXXXXX 1523
             HL L+S+ISGI+   S + D             ++                        
Sbjct: 1298 NHLLLLSKISGIKNFTSSETDEDASGSASQHAEERT-----------VDDDADDGDDDGN 1346

Query: 1522 XXXXXXXXAEKRKKQTCDELEYEDGMEKQTSVSVDEHDGVSSSGFESEVDQAEAEEDYEI 1343
                     +KRK+Q  DE+EYEDG E+      + ++   S+G ES+ DQA    D +I
Sbjct: 1347 DNDDLGFDGQKRKRQATDEMEYEDGYEE------ERNEPELSAGLESDGDQA---NDVDI 1397

Query: 1342 G--GDDPVTVAEE-----KMPEDDLGVVADEESPDNPVPXXXXXXXXXXXXXXXKEVDYA 1184
            G  GD P  +A E     K  +      +D+E                      KE D A
Sbjct: 1398 GEDGDGPPGIAPEIVSPSKTKKSKKNAKSDDEGKKR------------VRTKVIKEFDRA 1445

Query: 1183 IFVEAKGLNFEAHFALSGEHHILLAEIAQKTARRVYVKESKNIDRCSVV----------- 1037
            IFV A GL+FE HF  + E H+LL +IAQK A++VY++ S  I+ C V+           
Sbjct: 1446 IFVAANGLDFEVHFRFTNEPHVLLGQIAQKVAKKVYLRSSGKIESCQVITCKENQVIYYG 1505

Query: 1036 -EPKR-----STDR---IALQTAGVNFLAFWDLQDDLDINRVVTNDIHAMLNTYGVEAAR 884
             +PKR     + D+    A+ T G +F A W +QD LDI  + +NDIHAML TYGVEAAR
Sbjct: 1506 EDPKRRQKIEAKDKEAIPAINTNGADFCALWQMQDQLDIRYIYSNDIHAMLTTYGVEAAR 1565

Query: 883  ATIINEVKAVFEPYGIRVNTRHLSLIADFMSAHGGYRPMNRIGMMEFNTSPFSKMTFETA 704
             TII EV+ VF  YGI V+ RHL+LIADFM+  GGYRPMNR+G +  + SPFSKM+FETA
Sbjct: 1566 ETIIREVQNVFGSYGISVDMRHLTLIADFMTHAGGYRPMNRLGGIAESISPFSKMSFETA 1625

Query: 703  TRFIVEAAFHGESDVLQSPSASVCLGQPVKFGTGTFGLLQKL 578
            ++FIV+AA+HG  D L++PSA +CLG P+K GTG+F LLQK+
Sbjct: 1626 SKFIVDAAYHGVVDNLETPSARICLGLPMKMGTGSFDLLQKI 1667


>ref|XP_011075204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Sesamum
            indicum]
          Length = 1701

 Score = 1551 bits (4015), Expect = 0.0
 Identities = 853/1733 (49%), Positives = 1111/1733 (64%), Gaps = 90/1733 (5%)
 Frame = -3

Query: 5506 APSEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINETDSCKT 5327
            A +E+V+A++F F + E++++ SV KIT+P+LLD+   P+P GLYDPA+GP++E   CK+
Sbjct: 2    ASTEVVEAVRFGFMTDEEVRRHSVVKITNPNLLDILEKPIPGGLYDPAMGPLDENSPCKS 61

Query: 5326 CGLLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQYVAKLEH 5147
            CG  AY CPGHCGHI+LV P YNPLLF  L NLL  TCF+C +FR    +V+  V++LE 
Sbjct: 62   CGQRAYHCPGHCGHIELVSPAYNPLLFNTLNNLLNKTCFYCFQFRTSRREVENCVSQLEL 121

Query: 5146 IARGDVVAAKKTETS-----------LLAEAFSEDEDNGKDIKEKNAGVASCELETDSKD 5000
            I +GD+V AK+               +L++   + ED+       ++G++  +   +   
Sbjct: 122  IVKGDIVGAKRLSMRQNLQDKKNMDWVLSDDIVDPEDSQGSHTSHSSGISGDQNHYEQNS 181

Query: 4999 AKQKTWTSLQYAEAVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLSKT-TKDSDIRAD 4823
              Q  W S Q  EA+SVL+  +K + +KC NC  +NPK++ PTFGW   +   D+ +R++
Sbjct: 182  --QACWDSSQLTEAMSVLNEFLKKKGRKCKNCECNNPKLNKPTFGWFHVSGLSDTQLRSN 239

Query: 4822 FIRGS--DVGLSSTAEDKSAD--ANGDGTSQSEEELLAPTNVSEQLRNLPPDFFKRLYSS 4655
             IR S  DV  S   E++ +    N    S  ++   A  N      + P    K+  + 
Sbjct: 240  AIRRSRLDVAHSGGGEERPSSEVVNASDYSWKDDSETAEANSFIAASDTPKKSSKKGVNQ 299

Query: 4654 AGQKHL-----------LPSEAQLILEGLWRNEAQLCSLICDIQQNNLNVTGKNKAYAMF 4508
            A  + L           LPSE + IL  LW NEA LCS +CDIQQ    ++G    Y+MF
Sbjct: 300  ARNQGLEETNNYFSGPLLPSEVRDILRRLWENEAPLCSYMCDIQQQQCKLSGNVAGYSMF 359

Query: 4507 FLKVLLVPPSKFRPCAFGGRQVVEHPQNLLLSKVQESNIALQELITSDPDHPNTIRRWMD 4328
            FL+ +LVPP KFRP A GG  V+EHPQ +LL KV +SNIAL     ++ +    I RWMD
Sbjct: 360  FLESILVPPIKFRPPAKGGDSVMEHPQTVLLGKVLQSNIALGNAHVNNAERSKIINRWMD 419

Query: 4327 LQRSVTVLFDSSKGLAKSEKD-TNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYL 4151
            LQ S+ VLFDS    ++++KD T+GI Q LEKK GI RQKMMGKRVNFACRSVISPDPYL
Sbjct: 420  LQLSINVLFDSKTANSQAQKDGTSGICQFLEKKEGIFRQKMMGKRVNFACRSVISPDPYL 479

Query: 4150 AVNEIGIPPYFALKLTYPERVTPWNVNKLRHAVINGADIHPGASHYMDKDRLYKLQVSRS 3971
            AVNEIGIPPYFAL+LTYPERVTPWN  KLR AVING +IHPGA+ Y+D     KL  S+ 
Sbjct: 480  AVNEIGIPPYFALRLTYPERVTPWNAGKLRGAVINGPEIHPGATTYVDSVSTVKLPSSKK 539

Query: 3970 MRNAIGRKLPTSRGVTSQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVV 3791
            MR AI RKLP+SRG+ SQSGK  E +FEGK VYRHLQDGDIVLVNRQPTLHKPS+MAHVV
Sbjct: 540  MRVAISRKLPSSRGLVSQSGKINELEFEGKFVYRHLQDGDIVLVNRQPTLHKPSIMAHVV 599

Query: 3790 RVLNGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAMNIVNANKQYIVPTSGDP 3611
            RVL GEKTLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEA NIVNAN+QYIVPT GD 
Sbjct: 600  RVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDT 659

Query: 3610 IRGLIQDHIVSAVLLSKQDTFLTREQYHQLLYASCLPPAVNSLQPGIFGQKVSVLNSDDE 3431
            +RGLIQDHIV AVLL+ ++TFLTR ++ QLLY S +         G   +KVS+++S+  
Sbjct: 660  VRGLIQDHIVGAVLLTLKNTFLTRSEFSQLLYGSGVFAGGPGSLAGKQSRKVSLVDSEGL 719

Query: 3430 IQPIPPAIWKPKPLWTGKQVITAILCHITRGRSPFTIEKDGRIPKEYFAKDS-------- 3275
            ++ + P+IWKP+PLWTGKQVITA+L HITRG +P T++  G++PK YF   S        
Sbjct: 720  VESVLPSIWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFTGSSYKNGEEDE 779

Query: 3274 ---KEFSMHIYKNEFIHGIIDKAQFGKYGLVHIVHELYGADTAGSLLSIFSRLFTTFLQM 3104
                E ++ I+KNE + G+IDKAQFGK+GLVH + ELYG+++AG LLS  SRLFT FLQ+
Sbjct: 780  DQNAEHNLLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNSAGILLSALSRLFTIFLQI 839

Query: 3103 HAFTCGVDDLLLLQEADMGREVMLEKSEAQSGDVHFRFTGTKRGDIDPLDLCREIEKVVR 2924
            H FTCGVDDL++L   D+ R+  LE  E    +VH  F   K G I   +L  EIEKV+ 
Sbjct: 840  HGFTCGVDDLIILPHYDVQRKEKLE-GEDVGEEVHCDFVKFKPGQIGHEELQLEIEKVIC 898

Query: 2923 SNGESATARLDRMMSNSL-NVLT---SEVNKALFPAGLQKPFPRNCLSLMTTTGAKGGLV 2756
             + ESAT  LD  M N L N LT   S++ K L  AGL KPFP+NC+S+MTTTGAKG  V
Sbjct: 899  RDRESATGALDMKMKNKLTNRLTREGSQILKHLLTAGLLKPFPKNCISVMTTTGAKGSTV 958

Query: 2755 NLTQISSLLGQQELEGKRVPRMISGKTLPSFPPWDTSCRAGGFISDRFLTGLRPQEYYFH 2576
            N  QIS+ LGQQELEGKRVPRM+SGKTLP FPPWD + RAGGFI+DRFLTGLRPQEYYFH
Sbjct: 959  NFQQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTARAGGFITDRFLTGLRPQEYYFH 1018

Query: 2575 CMAGRDGLVDTAIKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSVVQFAYGEDGVDVL 2396
            CMAGR+GLVDTA+KTSRSGYLQRCLIKNLESLKVCYDYTVRDADGS++QF YGEDGVDV 
Sbjct: 1019 CMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVH 1078

Query: 2395 KTSYITEVQVLSNNQRVVLESLSCQLEDAHLSKSNSFIKELPDSLRERATNLSRQLSKSG 2216
            +TS++   + L +NQ  +L+         +  + +S+I++LP+ L E A    ++     
Sbjct: 1079 QTSFLKNFKALEDNQETILQKYR------NRRQFDSYIQKLPEGLEEEARRFIQEAGDLS 1132

Query: 2215 SRHQIXXXXXXXXXXXXXXXXL--------------------AEPGEPVGVIAAQSVGEP 2096
            S +Q                 +                    A+ GEPVGVIAAQS+GEP
Sbjct: 1133 SENQKASGIKHLNKSRKARKKVTGKVQDKFIELVKQKYLSSLAQSGEPVGVIAAQSIGEP 1192

Query: 2095 STQMTLNTFHLAGRGEMNVTLGIPRLQEILMSAKEAIRTPIMTCPLLDGMTKEDGERFAA 1916
            STQMTLNTFHLAGRGEMNVTLGIPRLQEILM+A + I+TPI+TCP L   +K D     +
Sbjct: 1193 STQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFLQWRSKHDVVSLVS 1252

Query: 1915 KLRRICVADIVESMEVSTVPFYIHKRRVSTLYKLKMKLYPCGLYPPHIDISLEDCRAILR 1736
             ++++ VAD++ESMEV      IH+ R+   YKLKMKL           +SL D +  L+
Sbjct: 1253 NVKKVTVADLIESMEVQ---LSIHQARI---YKLKMKLKDTEF------VSLRDIQETLK 1300

Query: 1735 TTFISAMEDAIKKHLDLISRISGIEVVSGKGDNSXXXXXXXXXGSKSXXXXXXXXXXXXX 1556
            T F+  +EDAI+ H+  +SR+SGI+       +           S               
Sbjct: 1301 TVFLRELEDAIENHVIFLSRVSGIKNFMSSSRSE---------ESNEAYEDDSGPRAQEE 1351

Query: 1555 XXXXXXXXXXXXXXXXXXXAEKRKKQTCDELEYEDGMEKQTSVSVDEHDGVSSSGFESE- 1379
                                +KRK+Q  DE++YED    ++ V   E +G+     + + 
Sbjct: 1352 IDDDDADDDYDKGDDLGSDVQKRKQQASDEMDYED----ESDVDPGEDEGLGKGKSDGDH 1407

Query: 1378 VDQAEAEEDYEIGGDDPVTVAEEKMPEDDLGVVADEESPDNPVPXXXXXXXXXXXXXXXK 1199
            ++  +  +D E    D    A      D++   A + S                     K
Sbjct: 1408 LEDIDTRKDEETDDFDDKDDASNVQNVDEVMAEA-KSSGKKDRAISKGIDKSIEELLSDK 1466

Query: 1198 EVDYAIFVEAKGLNFEAHFALSGEHHILLAEIAQKTARRVYVKESKNIDRCSVVE----- 1034
            ++  AI++E KGL+FE HF  + E H+LLA+IAQKTA++V++K +  I +C VV+     
Sbjct: 1467 KIRRAIYMEVKGLSFEVHFTFTSEPHVLLAQIAQKTAKKVFIKRTGKISQCKVVQYDPDE 1526

Query: 1033 ----------PKR-----------STDRIALQTAGVNFLAFWDLQDDLDINRVVTNDIHA 917
                      PK+            +   A++ +G +F + W++QDDLD++R+ +N+IHA
Sbjct: 1527 KTVIWDNKKKPKKGDAEKQQADGEDSAYWAVKASGEDFKSIWEMQDDLDLSRLYSNNIHA 1586

Query: 916  MLNTYGVEAARATIINEVKAVFEPYGIRVNTRHLSLIADFMSAHGGYRPMNRIGMMEFNT 737
            ML TYGVEAARAT+I EV  VF+ YG++++ RHLSLIAD+M+  GGYRPM+R G +  + 
Sbjct: 1587 MLKTYGVEAARATLIREVTQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRHGSISESL 1646

Query: 736  SPFSKMTFETATRFIVEAAFHGESDVLQSPSASVCLGQPVKFGTGTFGLLQKL 578
            SPF KM+FETA++FIVEAA H  +D L++PS+ +CLG PVK GTG F L+QKL
Sbjct: 1647 SPFLKMSFETASKFIVEAASHALTDNLETPSSRICLGLPVKMGTGCFDLMQKL 1699


>ref|XP_010546965.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Tarenaya
            hassleriana]
          Length = 1671

 Score = 1546 bits (4004), Expect = 0.0
 Identities = 861/1714 (50%), Positives = 1114/1714 (64%), Gaps = 68/1714 (3%)
 Frame = -3

Query: 5515 ANEAPSEIVDAIKFSFYSAEDIKKISVKKITSPDLLDVKGVPVPNGLYDPALGPINETDS 5336
            + E  +++V+A+KFSF + E+++K S  K+TSP LLD    PVP GLYDP LGP+++   
Sbjct: 6    STEGATQVVEAVKFSFMTDEEVRKHSFLKVTSPILLDNVERPVPGGLYDPILGPLDDRTP 65

Query: 5335 CKTCGLLAYRCPGHCGHIDLVKPLYNPLLFPILKNLLQITCFHCHRFRFMEDKVKQYVAK 5156
            CK+CGLL   CPGHCGHI+LV P+Y+PLLF  L +LLQ+TCF C  FR    +V++ V++
Sbjct: 66   CKSCGLLRLSCPGHCGHIELVSPVYHPLLFHFLHSLLQMTCFFCRHFRIRTQEVERVVSQ 125

Query: 5155 LEHIARGDVVAAKKTETSLLAEAFSEDEDNGKDIKEKNAGVA-SCELETDSKD------A 4997
            L  I +GDVV A+   +      +S+ E   +    +++ ++    L+ DS +       
Sbjct: 126  LNLIIKGDVVEARLLNSDSKFARWSDSESGRESTHSEHSDMSYEFGLDIDSSEKCRDPGT 185

Query: 4996 KQKTWTSLQYAEAVSVLSIIMKNRHKKCANCGRSNPKISSPTFGWLSKT-TKDSDIRADF 4820
             ++ WTSLQ++EA +VL+  +K + +KC  C   NPK+  PTFGW  +     S I A+ 
Sbjct: 186  PKQRWTSLQFSEATAVLNAFLKLKTEKCKRCKAKNPKVRKPTFGWFHRAGMTGSAIGANI 245

Query: 4819 IRGSDVGL-SSTAEDKSADANGDGTSQSEEELLAPTNVSEQLRNLPPDFFKRLYSSAGQK 4643
            I+G  V   SST ED   D N DG     E        +E    +  +F K  + +    
Sbjct: 246  IQGLKVRKPSSTVEDLDNDEN-DGIDAVSE--------AEDSAKVVNEFVK--HKNFSTS 294

Query: 4642 HLLPSEAQLILEGLWRNEAQLCSLICDIQQNNLNVTGKNKAYAMFFLKVLLVPPSKFRPC 4463
            HLLP+E + IL+ LW+NE + CS I D+QQ       K   + MFFL+ +LVPP KFR  
Sbjct: 295  HLLPTEVKEILKDLWQNEFEFCSFIGDLQQCG----SKKVDHNMFFLESILVPPIKFRAP 350

Query: 4462 AFGGRQVVEHPQNLLLSKVQESNIALQELITSDPDHPNTIRRWMDLQRSVTVLFDSSKGL 4283
              GG  V+EHPQ + L+ V ESNI+L     +  +    IRRWMDLQ+S+ VLFDS    
Sbjct: 351  TKGGASVMEHPQTVALTTVLESNISLGNAYFNKLEKSKKIRRWMDLQQSINVLFDSKTAT 410

Query: 4282 AKSEKDTNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALKLT 4103
            A+S+++ +GI QLLEKK G+ RQKMMGKRVN ACRSVISPDPY+AVNEIGIPPYFALKLT
Sbjct: 411  ARSQREASGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNEIGIPPYFALKLT 470

Query: 4102 YPERVTPWNVNKLRHAVINGADIHPGASHYMDKDRLYKLQVSRSMRNAIGRKLPTSRGVT 3923
            YPERVTPWNV KLR A+ING DIHPGA+HY D+    KL  +R  R A+ RKL +SRG  
Sbjct: 471  YPERVTPWNVEKLREAIINGPDIHPGATHYSDRLSTVKLPPTRKARIALARKLLSSRGTH 530

Query: 3922 SQSGKGPEYDFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLNGEKTLRMHYANC 3743
             +  K  + +FEGK+VYRH+QDGD VLVNRQPTLHKPS+MAH VRVL GEKTLR+HYANC
Sbjct: 531  MEPEKACDINFEGKIVYRHMQDGDAVLVNRQPTLHKPSIMAHKVRVLKGEKTLRLHYANC 590

Query: 3742 STYNADFDGDEMNVHFPQDEISRAEAMNIVNANKQYIVPTSGDPIRGLIQDHIVSAVLLS 3563
            STYNADFDGDEMNVHFPQDEISRAEA NIVNAN QY+ P++GDP+R LIQDH+VSAVLL+
Sbjct: 591  STYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVRPSNGDPLRALIQDHVVSAVLLT 650

Query: 3562 KQDTFLTREQYHQLLYASCLPPAVNSLQPGIFGQKVSVLNSDDEIQPIPPAIWKPKPLWT 3383
            K+DTFL ++Q+ QLL++S +   V S   G  G+KV V  SD E+  + PAI KP PLWT
Sbjct: 651  KRDTFLDKDQFDQLLFSSGVSDMVLSSFSGKPGKKVIVSASDAELLAVEPAILKPVPLWT 710

Query: 3382 GKQVITAILCHITRGRSPFTIEKDGRIPKEYFAKDSKEFS-------------------- 3263
            GKQVITA+L HIT+G+ PFT+EK  ++P ++F   S+E +                    
Sbjct: 711  GKQVITAVLNHITKGQPPFTVEKATKLPLDFFKIRSREANSKSKENNVRKHSSKKNDNDE 770

Query: 3262 ----------MHIYKNEFIHGIIDKAQFGKYGLVHIVHELYGADTAGSLLSIFSRLFTTF 3113
                      + I KN+F+ G+IDKAQF  YGLVHIV ELYG++ AG+LLS+ SRLFT +
Sbjct: 771  SWKRELDEDKLLINKNDFVRGVIDKAQFADYGLVHIVQELYGSNAAGNLLSVLSRLFTVY 830

Query: 3112 LQMHAFTCGVDDLLLLQEADMGREVMLEKSEAQSGDVHFRFTGTKRG-DIDPLDLCREIE 2936
            LQMH FTCGVDDL++ ++ D  R   LE+SE     V  +  G      IDP DL   +E
Sbjct: 831  LQMHGFTCGVDDLIINKDMDDKRMKQLEESELVGERVLRKAIGIGNDVQIDPKDLKSRVE 890

Query: 2935 KVVRSNGESATARLDRMMSNSLNVLTSE-VNKALFPAGLQKPFPRNCLSLMTTTGAKGGL 2759
            +++ S+GE+A   LDR + N LN  TS+ V   L   GL K   +NC+SLMT +GAKG  
Sbjct: 891  RIICSDGEAALLSLDRSIVNELNQCTSKGVMNDLLSDGLLKSTGKNCISLMTISGAKGSK 950

Query: 2758 VNLTQISSLLGQQELEGKRVPRMISGKTLPSFPPWDTSCRAGGFISDRFLTGLRPQEYYF 2579
            VN  QISS LGQQ+LEGKRVPRM+SGKTLP F PWD S RAGGFISDRFL+GLRPQEYYF
Sbjct: 951  VNFQQISSHLGQQDLEGKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYF 1010

Query: 2578 HCMAGRDGLVDTAIKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSVVQFAYGEDGVDV 2399
            HCMAGR+GLVDTA+KTSRSGYLQRCL+KNLESLKV YDYTVRD+DGS++QF YGEDGVDV
Sbjct: 1011 HCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKVNYDYTVRDSDGSIIQFQYGEDGVDV 1070

Query: 2398 LKTSYITEVQVLSNNQRVVLESLSCQLEDAHLSKSNSFIKELPDSLRERATNLSRQLS-K 2222
             +TS+I + + L+ N+ ++L+  S   ED  LS+SN +I +LP +L+++A      L  K
Sbjct: 1071 HRTSFIDKFKELTANRDMILQRCS---EDM-LSESNCYITDLPVTLKKQAEKFVEALPLK 1126

Query: 2221 SGSRHQIXXXXXXXXXXXXXXXXLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMN 2042
                 ++                LA+PGEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMN
Sbjct: 1127 ERIASKLVKEELLKLVKPKYFASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMN 1186

Query: 2041 VTLGIPRLQEILMSAKEAIRTPIMTCPLLDGMTKEDGERFAAKLRRICVADIVESMEVST 1862
            VTLGIPRLQEILM+A   I+TPIM+CPLL G TK+D    A KLR+I VADI+E MEVS 
Sbjct: 1187 VTLGIPRLQEILMTASADIKTPIMSCPLLKGKTKDDANDIADKLRKITVADIIEGMEVSV 1246

Query: 1861 VPFYIHKRRVSTLYKLKMKLYPCGLYPPHIDISLEDCRAILRTTFISAMEDAIKKHLDLI 1682
            VPF I ++ + +++KLKMKLY    YP +  I+ +D    L   F+ A+EDAI+ H+ L+
Sbjct: 1247 VPFTILEKELCSIHKLKMKLYKPEHYPKNTGITAKDWEETLTVVFLRALEDAIQNHIVLL 1306

Query: 1681 SRISGI----EVVSGKGDNSXXXXXXXXXGSKSXXXXXXXXXXXXXXXXXXXXXXXXXXX 1514
            S++SGI    E    K  N            +                            
Sbjct: 1307 SKMSGIKNFVEETPSKAGNGEDDGDGSVAQKQ-------------VREDEDEDAEGQDID 1353

Query: 1513 XXXXXAEKRKKQTCDELEYEDGMEKQTSVSVDEHDGVSSSGFES-EVDQAEAEEDYEIGG 1337
                 A+KRKKQ  DE++YE+  ++      ++++  S SG E  EVD    +ED EI  
Sbjct: 1354 DLGSDAQKRKKQATDEMDYEESSDE------EKNEPSSVSGIEDPEVD--NEDEDMEISK 1405

Query: 1336 DDPV-TVAEEKMPEDDLGVVADEESPDNPVPXXXXXXXXXXXXXXXKEVDYAIFVEAKGL 1160
            +D V    EE  PE+     A++                       KE D  +FV+AKG+
Sbjct: 1406 EDLVGDDGEEPKPEEGKKTKAEKTEKKK----------KKRKAFEVKETDRHVFVKAKGM 1455

Query: 1159 NFEAHFALSGEHHILLAEIAQKTARRVYVKESKNIDRCSVVE------------PKRSTD 1016
             FE HF    E HILLA+IAQKTA++VY++    I RC+V +            PK   D
Sbjct: 1456 EFEVHFKFKKEPHILLAQIAQKTAQKVYIQNCGEIQRCTVTDCGDAQVIYYGENPKERKD 1515

Query: 1015 --------RIALQTAGVNFLAFWDLQDDLDINRVVTNDIHAMLNTYGVEAARATIINEVK 860
                    + AL  AG++F  FW+LQD++D+  + +N IHAMLNTYGVEAAR TII E+ 
Sbjct: 1516 VSNDEKKAKPALHAAGIDFTTFWELQDEIDVRYLYSNSIHAMLNTYGVEAARETIIREIN 1575

Query: 859  AVFEPYGIRVNTRHLSLIADFMSAHGGYRPMNRIGMMEFNTSPFSKMTFETATRFIVEAA 680
             VF+ YGI V+ RHL+LIAD+M+  GGYRPM+R+G +  +TSPF +M+FETATRFIV+AA
Sbjct: 1576 HVFKSYGISVSIRHLNLIADYMTYSGGYRPMSRMGGIAESTSPFCRMSFETATRFIVQAA 1635

Query: 679  FHGESDVLQSPSASVCLGQPVKFGTGTFGLLQKL 578
             +GE D L++PS+ +CLG PV+ GTG+F +LQ+L
Sbjct: 1636 TYGEVDNLETPSSRICLGLPVQSGTGSFDVLQRL 1669