BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00009258
         (1308 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008808652.1| PREDICTED: RNA pseudouridine synthase 1-like...   406   e-110
ref|XP_010914561.1| PREDICTED: RNA pseudouridine synthase 1 [Ela...   390   e-105
ref|XP_009414384.1| PREDICTED: RNA pseudouridine synthase 1 [Mus...   390   e-105
dbj|BAK01967.1| predicted protein [Hordeum vulgare subsp. vulgare]    385   e-104
ref|XP_008672357.1| PREDICTED: hypothetical protein isoform X2 [...   385   e-104
gb|ACN26382.1| unknown [Zea mays]                                     384   e-104
ref|NP_001067018.1| Os12g0560500 [Oryza sativa Japonica Group] g...   384   e-104
gb|EEE53427.1| hypothetical protein OsJ_36505 [Oryza sativa Japo...   382   e-103
ref|XP_008672356.1| PREDICTED: hypothetical protein isoform X1 [...   380   e-103
ref|XP_002442321.1| hypothetical protein SORBIDRAFT_08g018120 [S...   380   e-103
gb|ACN27400.1| unknown [Zea mays]                                     379   e-102
ref|XP_003579309.2| PREDICTED: RNA pseudouridine synthase 1 [Bra...   378   e-102
ref|XP_004962774.2| PREDICTED: RNA pseudouridine synthase 1 [Set...   378   e-102
ref|XP_006664100.1| PREDICTED: RNA pseudouridine synthase 1-like...   372   e-100
ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prun...   368   5e-99
ref|XP_010259314.1| PREDICTED: RNA pseudouridine synthase 1 [Nel...   367   8e-99
ref|XP_008245928.1| PREDICTED: RNA pseudouridine synthase 1 [Pru...   367   1e-98
ref|XP_008359854.1| PREDICTED: RNA pseudouridine synthase 1-like...   362   5e-97
ref|XP_009373279.1| PREDICTED: RNA pseudouridine synthase 1-like...   360   1e-96
ref|XP_011466146.1| PREDICTED: RNA pseudouridine synthase 1 isof...   354   7e-95

>ref|XP_008808652.1| PREDICTED: RNA pseudouridine synthase 1-like isoform X1 [Phoenix
            dactylifera]
          Length = 319

 Score =  406 bits (1044), Expect = e-110
 Identities = 195/282 (69%), Positives = 235/282 (83%), Gaps = 4/282 (1%)
 Frame = -3

Query: 1054 SRELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLSSLASRPGSETS 875
            S+ +E++RA++A ARS S+EL +G++V+ED WLA+ NKP+G+YCE +LSS  S  G  T 
Sbjct: 35   SKVVELRRAMTAAARSGSFELTAGEIVYEDEWLAIANKPSGVYCEAVLSSFPSLRGFATV 94

Query: 874  QSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKAYLALCIGRAPNWEKIRVS 695
            QS LHLANRLDRDTSGLM+ITKS+KVAGK VKAFTNH+VKK YLALCIG AP+W+KI +S
Sbjct: 95   QSELHLANRLDRDTSGLMVITKSHKVAGKLVKAFTNHEVKKTYLALCIGYAPSWKKITIS 154

Query: 694  SGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSINGKGKYREPTELDTNEMEL 515
            SGHGRSKFGAWRVY+TSDVGRTLPGGSMV+ M TSFEVLSING+GK+REPTE + +E E 
Sbjct: 155  SGHGRSKFGAWRVYSTSDVGRTLPGGSMVKHMVTSFEVLSINGQGKFREPTEPEAHEAES 214

Query: 514  VVVQEKGAECTGDNE----DEILVRAYPESGRTHQIRLHCQYLGIPIRGDVKYGGVDEWR 347
            ++VQEKG E  G N+    DEILVRAYP+SGRTHQIRLHCQYLGIPI+GDVKYGGV EW+
Sbjct: 215  IIVQEKGIE-RGRNDDMKADEILVRAYPQSGRTHQIRLHCQYLGIPIKGDVKYGGVLEWK 273

Query: 346  GLTCDGHALHAESLSFKHPITGEYVQLSAPTPSWVYELYGAI 221
            G++CD H LHAESLSF+HP+TG  VQ     P W  E+ G++
Sbjct: 274  GISCDAHTLHAESLSFRHPVTGLPVQFQPTLPLWASEICGSM 315


>ref|XP_010914561.1| PREDICTED: RNA pseudouridine synthase 1 [Elaeis guineensis]
          Length = 355

 Score =  390 bits (1001), Expect = e-105
 Identities = 189/281 (67%), Positives = 230/281 (81%), Gaps = 3/281 (1%)
 Frame = -3

Query: 1054 SRELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLSSLASRPGSETS 875
            S+E+E++RA++A ARS  +E+ +GD+VFED WLAV NK +G+YCE +LSS  S  GS T 
Sbjct: 74   SKEVELRRAMTAAARSGDFEMTAGDIVFEDEWLAVANKASGVYCEAVLSSFKSLRGSATV 133

Query: 874  QSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKAYLALCIGRAPNWEKIRVS 695
             S LHLANRLDRDTSGLM+ITKS+KVAG+ VKAFT+HKVKK YLALCIG AP+W+KI +S
Sbjct: 134  PSELHLANRLDRDTSGLMVITKSHKVAGRLVKAFTDHKVKKTYLALCIGYAPSWKKITIS 193

Query: 694  SGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSINGKGKYREPTELDTNEMEL 515
            SGHGRSKFGAWRVY+ SDVGRTLPGGSMVR M TSFEVLSING+GK REP   + ++ E 
Sbjct: 194  SGHGRSKFGAWRVYSASDVGRTLPGGSMVRHMVTSFEVLSINGQGKLREP---EAHDAES 250

Query: 514  VVVQEKGAECTGDNE---DEILVRAYPESGRTHQIRLHCQYLGIPIRGDVKYGGVDEWRG 344
            ++VQEKG E + D++   DEILVRA P+SGRTHQIRLHCQYLGIPI+GDVKY GV EW+G
Sbjct: 251  IIVQEKGIERSRDDDMKTDEILVRACPQSGRTHQIRLHCQYLGIPIKGDVKYCGVLEWKG 310

Query: 343  LTCDGHALHAESLSFKHPITGEYVQLSAPTPSWVYELYGAI 221
            ++CD HALHAE LS +HP+TG  V+  AP P W  E+ G++
Sbjct: 311  ISCDAHALHAERLSLQHPVTGLPVRFQAPLPLWANEICGSM 351


>ref|XP_009414384.1| PREDICTED: RNA pseudouridine synthase 1 [Musa acuminata subsp.
            malaccensis]
          Length = 350

 Score =  390 bits (1001), Expect = e-105
 Identities = 198/344 (57%), Positives = 245/344 (71%), Gaps = 20/344 (5%)
 Frame = -3

Query: 1198 MTRIPLTSPNITSLPFTAVRF-------RSMVSASG-----------SETLTGXXXXXXX 1073
            MT+IP  +  +      A+R        RSM + S            +E L+G       
Sbjct: 1    MTKIPFHTNRVLCFQSQALRLIHSPPSLRSMAALSTKDPGSGTSDGPAEVLSGNYPTPLS 60

Query: 1072 XXXPELSRELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLSSLASR 893
               P LS+ +E+ RA+SA ARS  Y L + D+VFED +L V NKP+G+YCE +LSSL+S 
Sbjct: 61   PPYPPLSKNVELHRAMSAAARSGEYALSAADIVFEDQYLVVANKPSGVYCEAILSSLSSS 120

Query: 892  PGSETSQSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKAYLALCIGRAPNW 713
             GS   +   HLANRLDRDTSGLM+ITKS+K AG+ VKAFT+HKVKK YLALCIG AP+W
Sbjct: 121  LGSVIVKPEFHLANRLDRDTSGLMVITKSHKAAGRLVKAFTDHKVKKTYLALCIGYAPDW 180

Query: 712  EKIRVSSGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSINGKGKYREPTELD 533
             KIR+ SGHGRSKFGAWRVY+T ++GRTLPGGSMV++M TSFEVL +NGKGK+REP +  
Sbjct: 181  NKIRIISGHGRSKFGAWRVYSTEEIGRTLPGGSMVKNMVTSFEVLFVNGKGKFREPIDHK 240

Query: 532  TNEMELVVVQEKGAECTGDNE--DEILVRAYPESGRTHQIRLHCQYLGIPIRGDVKYGGV 359
             N++E VVVQ++      D +  D+IL+RAYP+SGRTHQIRLHCQYLGIPIRGDVKYGG 
Sbjct: 241  VNDVESVVVQKEAERSIDDGKKSDQILIRAYPQSGRTHQIRLHCQYLGIPIRGDVKYGGF 300

Query: 358  DEWRGLTCDGHALHAESLSFKHPITGEYVQLSAPTPSWVYELYG 227
             EW+G+T D HALHAESLSF+HPITG  V++ AP P W  E+ G
Sbjct: 301  HEWKGITYDTHALHAESLSFEHPITGMPVRIQAPLPLWASEICG 344


>dbj|BAK01967.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 346

 Score =  385 bits (990), Expect = e-104
 Identities = 202/351 (57%), Positives = 244/351 (69%), Gaps = 6/351 (1%)
 Frame = -3

Query: 1267 LTLICSLLNPRGQTETLAQSRP*MTRIPLTSPNITSLPFTAVRFRSMVSASGSETLTGXX 1088
            L L+  LL+PR  +   A + P   R+ + +              S+  A  S   TG  
Sbjct: 4    LPLLLPLLSPRAASPPRALTPPPARRLAVAAAGA-----------SVQDAVMSAAATGEY 52

Query: 1087 XXXXXXXXPELSRELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLS 908
                    P +S+++E++RA++A ARS +Y   S  VVFED WLAVV+KPAG+YCE LLS
Sbjct: 53   PCPVSPPYPAVSKDVELRRAMTASARSGAYS--SAAVVFEDEWLAVVDKPAGVYCEALLS 110

Query: 907  SL---ASRPGSETSQSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKAYLAL 737
            +L    +  G  +S+ NLHLANRLDRDTSGLM+ITK NKVA K VKAFT HKVKK YLAL
Sbjct: 111  ALPCSTASSGDPSSKPNLHLANRLDRDTSGLMVITKCNKVAAKLVKAFTEHKVKKTYLAL 170

Query: 736  CIGRAPNWEKIRVSSGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSINGKGK 557
            CIG  P WEK++V SGHGRSK GAWRVYA SDVGRTLPGGS VRDM+T FEVL  +GKG+
Sbjct: 171  CIGYLPAWEKVKVCSGHGRSKHGAWRVYAMSDVGRTLPGGSSVRDMSTKFEVLGTDGKGQ 230

Query: 556  YREPTELDTNEMELVVVQEKGAECTGD---NEDEILVRAYPESGRTHQIRLHCQYLGIPI 386
            YREP+ +D +++E + VQEK A+ T +       + VRAYP+SGRTHQIRLHCQYLGIPI
Sbjct: 231  YREPSNVDIDDIESITVQEKAADQTSNVDVKSHMVFVRAYPQSGRTHQIRLHCQYLGIPI 290

Query: 385  RGDVKYGGVDEWRGLTCDGHALHAESLSFKHPITGEYVQLSAPTPSWVYEL 233
            RGDVKYGGV EW G+ CDGHALHAESLSF HP+TG  V   AP PSW  E+
Sbjct: 291  RGDVKYGGVIEWNGVDCDGHALHAESLSFVHPVTGLPVTFQAPLPSWANEI 341


>ref|XP_008672357.1| PREDICTED: hypothetical protein isoform X2 [Zea mays]
            gi|414878128|tpg|DAA55259.1| TPA: hypothetical protein
            ZEAMMB73_192305 [Zea mays]
          Length = 340

 Score =  385 bits (989), Expect = e-104
 Identities = 203/342 (59%), Positives = 247/342 (72%), Gaps = 16/342 (4%)
 Frame = -3

Query: 1198 MTRIPL-----------TSPNITSLPFTAVRFRSMVSASGSETLTGXXXXXXXXXXPELS 1052
            MT++PL            SP  + LP  A    +M +A+ +    G          P  S
Sbjct: 1    MTKLPLPLLLLQPPAGAASPLRSLLP-PARSLTAMSAATSTAPSIGEYPSPVSPPYPATS 59

Query: 1051 RELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLSSLASRPGSET-- 878
            ++LE++RA++A ARSA++   S DVVFED WLAVV+KPAG+YC+ LL+S      SE   
Sbjct: 60   KDLELRRAMTASARSAAF--ASADVVFEDEWLAVVDKPAGVYCDALLTSFPCSAVSENPA 117

Query: 877  SQSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKAYLALCIGRAPNWEKIRV 698
            ++ NLHLANRLDRDTSGLM+ITK NKVAGK VKAFT+HKVKK YLALCIG  P WEKI++
Sbjct: 118  TKPNLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTDHKVKKTYLALCIGFPPAWEKIKI 177

Query: 697  SSGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSINGKGKYREPTELDTNEME 518
             SGHGRSK GAWRVYA SDVGR+LPGGS+VRDM+T FEVL +NGKG++REP  LDT+++E
Sbjct: 178  CSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTRFEVLGVNGKGQFREPYSLDTDDIE 237

Query: 517  LVVVQEKGAE--CTGD-NEDEILVRAYPESGRTHQIRLHCQYLGIPIRGDVKYGGVDEWR 347
             + VQEK  +  C GD N   ILVRAYP+SGRTHQIRLHCQYLG+PIRGDVKYGGV EW 
Sbjct: 238  PITVQEKATDQTCGGDANSSVILVRAYPQSGRTHQIRLHCQYLGLPIRGDVKYGGVIEWD 297

Query: 346  GLTCDGHALHAESLSFKHPITGEYVQLSAPTPSWVYELYGAI 221
            G+ C+GHALHAESLSF HPITG  + L +P P W  +   A+
Sbjct: 298  GVECEGHALHAESLSFVHPITGLPITLRSPLPPWAKDCISAM 339


>gb|ACN26382.1| unknown [Zea mays]
          Length = 307

 Score =  384 bits (986), Expect = e-104
 Identities = 190/283 (67%), Positives = 227/283 (80%), Gaps = 5/283 (1%)
 Frame = -3

Query: 1054 SRELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLSSLASRPGSET- 878
            S++LE++RA++A ARSA++   S DVVFED WLAVV+KPAG+YC+ LL+S      SE  
Sbjct: 26   SKDLELRRAMTASARSAAF--ASADVVFEDEWLAVVDKPAGVYCDALLTSFPCSAVSENP 83

Query: 877  -SQSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKAYLALCIGRAPNWEKIR 701
             ++ NLHLANRLDRDTSGLM+ITK NKVAGK VKAFT+HKVKK YLALCIG  P WEKI+
Sbjct: 84   ATKPNLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTDHKVKKTYLALCIGFPPAWEKIK 143

Query: 700  VSSGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSINGKGKYREPTELDTNEM 521
            + SGHGRSK GAWRVYA SDVGR+LPGGS+VRDM+T FEVL +NGKG++REP  LDT+++
Sbjct: 144  ICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTRFEVLGVNGKGQFREPYSLDTDDI 203

Query: 520  ELVVVQEKGAE--CTGD-NEDEILVRAYPESGRTHQIRLHCQYLGIPIRGDVKYGGVDEW 350
            E + VQEK  +  C GD N   ILVRAYP+SGRTHQIRLHCQYLG+PIRGDVKYGGV EW
Sbjct: 204  EPITVQEKATDQTCGGDANSSVILVRAYPQSGRTHQIRLHCQYLGLPIRGDVKYGGVIEW 263

Query: 349  RGLTCDGHALHAESLSFKHPITGEYVQLSAPTPSWVYELYGAI 221
             G+ C+GHALHAESLSF HPITG  + L +P P W  +   A+
Sbjct: 264  DGVECEGHALHAESLSFVHPITGLPITLRSPLPPWAKDCISAM 306


>ref|NP_001067018.1| Os12g0560500 [Oryza sativa Japonica Group]
            gi|122203511|sp|Q2QNM3.1|PUS1_ORYSJ RecName: Full=RNA
            pseudouridine synthase 1; AltName: Full=RNA
            pseudouridylate synthase 1; AltName: Full=RNA-uridine
            isomerase 1 gi|77556134|gb|ABA98930.1| RNA
            pseudouridylate synthase, putative, expressed [Oryza
            sativa Japonica Group] gi|113649525|dbj|BAF30037.1|
            Os12g0560500 [Oryza sativa Japonica Group]
            gi|125537021|gb|EAY83509.1| hypothetical protein
            OsI_38723 [Oryza sativa Indica Group]
            gi|215692563|dbj|BAG87983.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 345

 Score =  384 bits (986), Expect = e-104
 Identities = 203/347 (58%), Positives = 244/347 (70%), Gaps = 20/347 (5%)
 Frame = -3

Query: 1198 MTRIPLT--SPNITSL-------PFTAVRFRSMVSASGSETL-----TGXXXXXXXXXXP 1061
            MTR+PL   SP   +        P    R     +A G  +L     TG          P
Sbjct: 1    MTRLPLLLHSPRFAAALTTPPPPPLPPARRLVAAAAGGDLSLAMSAATGEYPVPVSPPYP 60

Query: 1060 ELSRELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLSSL---ASRP 890
              S+++E++RA++A ARSA+Y   S  VVFED WLAVV+KPAG+YC+ LLS+L   A+  
Sbjct: 61   AASKDVELRRAMTASARSAAYS--SAPVVFEDEWLAVVDKPAGVYCDALLSALPCSAATL 118

Query: 889  GSETSQSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKAYLALCIGRAPNWE 710
            G E ++ NLHLANRLDRDTSGLM+ITK NKVAGK VKAFT HKVKK YLALCIG  P WE
Sbjct: 119  GDEATKPNLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTEHKVKKTYLALCIGYPPAWE 178

Query: 709  KIRVSSGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSINGKGKYREPTELDT 530
            KI++ SGHGRSK GAWRVYA SDVGR+LPGGS+VRDM+T FEVL INGKG++REP+  + 
Sbjct: 179  KIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTRFEVLGINGKGQFREPSNFEV 238

Query: 529  NEMELVVVQEKGAECTGDNEDE---ILVRAYPESGRTHQIRLHCQYLGIPIRGDVKYGGV 359
            +E E + VQEK A+ T D +++   ILVRAYP+SGRTHQIRLHCQYLG PIRGDVKY GV
Sbjct: 239  DETESITVQEKAADLTSDGDEKNSIILVRAYPQSGRTHQIRLHCQYLGFPIRGDVKYSGV 298

Query: 358  DEWRGLTCDGHALHAESLSFKHPITGEYVQLSAPTPSWVYELYGAIS 218
             EW G+  DGHALHAESLSF HP+TG  V   +P PSW  E    ++
Sbjct: 299  IEWNGVDYDGHALHAESLSFVHPVTGLPVTFRSPLPSWANEFISTMA 345


>gb|EEE53427.1| hypothetical protein OsJ_36505 [Oryza sativa Japonica Group]
          Length = 423

 Score =  382 bits (982), Expect = e-103
 Identities = 188/285 (65%), Positives = 225/285 (78%), Gaps = 6/285 (2%)
 Frame = -3

Query: 1054 SRELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLSSL---ASRPGS 884
            S+++E++RA++A ARSA+Y   S  VVFED WLAVV+KPAG+YC+ LLS+L   A+  G 
Sbjct: 141  SKDVELRRAMTASARSAAYS--SAPVVFEDEWLAVVDKPAGVYCDALLSALPCSAATLGD 198

Query: 883  ETSQSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKAYLALCIGRAPNWEKI 704
            E ++ NLHLANRLDRDTSGLM+ITK NKVAGK VKAFT HKVKK YLALCIG  P WEKI
Sbjct: 199  EATKPNLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTEHKVKKTYLALCIGYPPAWEKI 258

Query: 703  RVSSGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSINGKGKYREPTELDTNE 524
            ++ SGHGRSK GAWRVYA SDVGR+LPGGS+VRDM+T FEVL INGKG++REP+  + +E
Sbjct: 259  KICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTRFEVLGINGKGQFREPSNFEVDE 318

Query: 523  MELVVVQEKGAECTGDNEDE---ILVRAYPESGRTHQIRLHCQYLGIPIRGDVKYGGVDE 353
             E + VQEK A+ T D +++   ILVRAYP+SGRTHQIRLHCQYLG PIRGDVKY GV E
Sbjct: 319  TESITVQEKAADLTSDGDEKNSIILVRAYPQSGRTHQIRLHCQYLGFPIRGDVKYSGVIE 378

Query: 352  WRGLTCDGHALHAESLSFKHPITGEYVQLSAPTPSWVYELYGAIS 218
            W G+  DGHALHAESLSF HP+TG  V   +P PSW  E    ++
Sbjct: 379  WNGVDYDGHALHAESLSFVHPVTGLPVTFRSPLPSWANEFISTMA 423



 Score = 66.2 bits (160), Expect = 5e-08
 Identities = 31/51 (60%), Positives = 43/51 (84%)
 Frame = -3

Query: 1054 SRELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLSSL 902
            S+++E++RA++A ARSA+Y   S  VVFED WLAVV+KPAG+YC+ LLS+L
Sbjct: 20   SKDVELRRAMTASARSAAYS--SAPVVFEDEWLAVVDKPAGVYCDALLSAL 68


>ref|XP_008672356.1| PREDICTED: hypothetical protein isoform X1 [Zea mays]
            gi|414878129|tpg|DAA55260.1| TPA: hypothetical protein
            ZEAMMB73_192305 [Zea mays]
          Length = 348

 Score =  380 bits (977), Expect = e-103
 Identities = 204/353 (57%), Positives = 248/353 (70%), Gaps = 27/353 (7%)
 Frame = -3

Query: 1198 MTRIPL-----------TSPNITSLPFTAVRFRSMVSASGSETLTGXXXXXXXXXXPELS 1052
            MT++PL            SP  + LP  A    +M +A+ +    G          P  S
Sbjct: 1    MTKLPLPLLLLQPPAGAASPLRSLLP-PARSLTAMSAATSTAPSIGEYPSPVSPPYPATS 59

Query: 1051 RELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLSS----------- 905
            ++LE++RA++A ARSA++   S DVVFED WLAVV+KPAG+YC+ LL+S           
Sbjct: 60   KDLELRRAMTASARSAAF--ASADVVFEDEWLAVVDKPAGVYCDALLTSFPCSAVSGKHF 117

Query: 904  --LASRPGSETSQSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKAYLALCI 731
              LA  P ++    NLHLANRLDRDTSGLM+ITK NKVAGK VKAFT+HKVKK YLALCI
Sbjct: 118  LRLAENPATKP---NLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTDHKVKKTYLALCI 174

Query: 730  GRAPNWEKIRVSSGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSINGKGKYR 551
            G  P WEKI++ SGHGRSK GAWRVYA SDVGR+LPGGS+VRDM+T FEVL +NGKG++R
Sbjct: 175  GFPPAWEKIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTRFEVLGVNGKGQFR 234

Query: 550  EPTELDTNEMELVVVQEKGAE--CTGD-NEDEILVRAYPESGRTHQIRLHCQYLGIPIRG 380
            EP  LDT+++E + VQEK  +  C GD N   ILVRAYP+SGRTHQIRLHCQYLG+PIRG
Sbjct: 235  EPYSLDTDDIEPITVQEKATDQTCGGDANSSVILVRAYPQSGRTHQIRLHCQYLGLPIRG 294

Query: 379  DVKYGGVDEWRGLTCDGHALHAESLSFKHPITGEYVQLSAPTPSWVYELYGAI 221
            DVKYGGV EW G+ C+GHALHAESLSF HPITG  + L +P P W  +   A+
Sbjct: 295  DVKYGGVIEWDGVECEGHALHAESLSFVHPITGLPITLRSPLPPWAKDCISAM 347


>ref|XP_002442321.1| hypothetical protein SORBIDRAFT_08g018120 [Sorghum bicolor]
            gi|241943014|gb|EES16159.1| hypothetical protein
            SORBIDRAFT_08g018120 [Sorghum bicolor]
          Length = 315

 Score =  380 bits (977), Expect = e-103
 Identities = 189/286 (66%), Positives = 224/286 (78%), Gaps = 13/286 (4%)
 Frame = -3

Query: 1054 SRELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLSSLASRPGS--- 884
            S+++E++RA++A ARSA++   S DVVFED WLAVV+KPAG+YC+  L+SL S   S   
Sbjct: 26   SKDVELRRAMTASARSAAF--ASADVVFEDEWLAVVDKPAGVYCDAFLTSLPSSVVSGKY 83

Query: 883  -------ETSQSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKAYLALCIGR 725
                     ++ NLHLANRLDRDTSGLM+ITK NKVAGK VKAFT+HKVKK YLALCIG 
Sbjct: 84   FLRLAEDPATKPNLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTDHKVKKTYLALCIGC 143

Query: 724  APNWEKIRVSSGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSINGKGKYREP 545
             P WEKI++ SGHGRSK GAWRVYA SDVGR+LPGGS+VRDM+T FEVL +NGK ++REP
Sbjct: 144  PPTWEKIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTQFEVLGVNGKCQFREP 203

Query: 544  TELDTNEMELVVVQEKGAE--CTGD-NEDEILVRAYPESGRTHQIRLHCQYLGIPIRGDV 374
               DT+++E + VQEK A+  C+GD N   ILVRAYP+SGRTHQIRLHCQYLG PIRGDV
Sbjct: 204  YNFDTDDIESITVQEKAADQTCSGDVNNSAILVRAYPQSGRTHQIRLHCQYLGFPIRGDV 263

Query: 373  KYGGVDEWRGLTCDGHALHAESLSFKHPITGEYVQLSAPTPSWVYE 236
            KYGGV EW G+ CDGHALHAESLSF HPITG  +   +P PSW  E
Sbjct: 264  KYGGVIEWNGVECDGHALHAESLSFVHPITGLPITFRSPLPSWAKE 309


>gb|ACN27400.1| unknown [Zea mays]
          Length = 315

 Score =  379 bits (974), Expect = e-102
 Identities = 191/294 (64%), Positives = 228/294 (77%), Gaps = 16/294 (5%)
 Frame = -3

Query: 1054 SRELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLSS---------- 905
            S++LE++RA++A ARSA++   S DVVFED WLAVV+KPAG+YC+ LL+S          
Sbjct: 26   SKDLELRRAMTASARSAAF--ASADVVFEDEWLAVVDKPAGVYCDALLTSFPCSAVSGKH 83

Query: 904  ---LASRPGSETSQSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKAYLALC 734
               LA  P ++    NLHLANRLDRDTSGLM+ITK NKVAGK VKAFT+HKVKK YLALC
Sbjct: 84   FLRLAENPATKP---NLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTDHKVKKTYLALC 140

Query: 733  IGRAPNWEKIRVSSGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSINGKGKY 554
            IG  P WEKI++ SGHGRSK GAWRVYA SDVGR+LPGGS+VRDM+T FEVL +NGKG++
Sbjct: 141  IGFPPAWEKIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTRFEVLGVNGKGQF 200

Query: 553  REPTELDTNEMELVVVQEKGAE--CTGD-NEDEILVRAYPESGRTHQIRLHCQYLGIPIR 383
            REP  LDT+++E + VQEK  +  C GD N   ILVRAYP+SGRTHQIRLHCQYLG+PIR
Sbjct: 201  REPYSLDTDDIEPITVQEKATDQTCGGDANSSVILVRAYPQSGRTHQIRLHCQYLGLPIR 260

Query: 382  GDVKYGGVDEWRGLTCDGHALHAESLSFKHPITGEYVQLSAPTPSWVYELYGAI 221
            GDVKYGGV EW G+ C+GHALHAESLSF HPITG  + L +P P W  +   A+
Sbjct: 261  GDVKYGGVIEWDGVECEGHALHAESLSFVHPITGLPITLRSPLPPWAKDCISAM 314


>ref|XP_003579309.2| PREDICTED: RNA pseudouridine synthase 1 [Brachypodium distachyon]
          Length = 353

 Score =  378 bits (971), Expect = e-102
 Identities = 198/355 (55%), Positives = 249/355 (70%), Gaps = 7/355 (1%)
 Frame = -3

Query: 1276 RIPLTLICSLLNPRGQTETLAQSRP*MTRIPLTSPNITSLPFTAVRFRSMVSASGSETLT 1097
            ++PL L+  L++PR  +   A   P   R  +T+     +   A+      S + +    
Sbjct: 3    KVPL-LLSPLVSPRFPSPARALQPPCARRRAVTAAGAGLVQEAAM------SEAAALVAN 55

Query: 1096 GXXXXXXXXXXPELSRELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCET 917
            G          P +S+++E++RA++A ARS +Y   S  VVFED WL+VV+KPAG+YC+ 
Sbjct: 56   GEYPCPVSPPYPAVSKDVELRRAMTASARSGAY--ASAAVVFEDEWLSVVDKPAGVYCDA 113

Query: 916  LLSSL----ASRPGSETSQSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKA 749
            LLS+L    A+  G   ++ NLHLANRLDRDTSGLM+ITK NKVA K VKAFT HKVKK 
Sbjct: 114  LLSALPCYAAAAAGDPATKPNLHLANRLDRDTSGLMVITKCNKVAAKLVKAFTEHKVKKT 173

Query: 748  YLALCIGRAPNWEKIRVSSGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSIN 569
            YLALCIG  P WEKIR+ SGHGRSK GAWRVYA SDVGRTLPGGS VRDM+T FEVL IN
Sbjct: 174  YLALCIGYPPTWEKIRICSGHGRSKHGAWRVYAMSDVGRTLPGGSSVRDMSTKFEVLGIN 233

Query: 568  GKGKYREPTELDTNEMELVVVQEKGAECTGDNE---DEILVRAYPESGRTHQIRLHCQYL 398
            GKG++REP+ ++ +++E + VQEK A+ +  ++     ILVRAYP+SGRTHQIRLHCQYL
Sbjct: 234  GKGQFREPSNVNIDDIESITVQEKAADHSSTDDLKNHMILVRAYPQSGRTHQIRLHCQYL 293

Query: 397  GIPIRGDVKYGGVDEWRGLTCDGHALHAESLSFKHPITGEYVQLSAPTPSWVYEL 233
            G PIRGDVKYGGV EW G+ CDGHALH+ESLSF HP+TG  +   AP PSW  E+
Sbjct: 294  GFPIRGDVKYGGVIEWNGVDCDGHALHSESLSFVHPVTGLPITFRAPLPSWANEV 348


>ref|XP_004962774.2| PREDICTED: RNA pseudouridine synthase 1 [Setaria italica]
          Length = 342

 Score =  378 bits (970), Expect = e-102
 Identities = 198/335 (59%), Positives = 241/335 (71%), Gaps = 17/335 (5%)
 Frame = -3

Query: 1198 MTRIPLTSPNITSLPFTAVR--------FRSMVSASGSETLT----GXXXXXXXXXXPEL 1055
            MT++PL    + S P  A           R + + S + T T    G          P +
Sbjct: 1    MTKLPLPLLLLLSPPAAAAAPLRSLLPPERRLAAMSAATTTTAPVSGEYPSPVSPPYPAV 60

Query: 1054 SRELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLSSL--ASRPGSE 881
            S+++E++RA++A ARSA +   S DVVFED WLAVV+KPAG+YC+ LL++L  ++  G  
Sbjct: 61   SKDVELRRAMTASARSAVF--ASADVVFEDEWLAVVDKPAGVYCDALLTALPRSAASGDS 118

Query: 880  TSQSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKAYLALCIGRAPNWEKIR 701
             ++ NLHLANRLDRDTSGLMIITK NKVAGK VKAFT+HKVKKAYLALCIG  P WEKI+
Sbjct: 119  ATKPNLHLANRLDRDTSGLMIITKCNKVAGKLVKAFTDHKVKKAYLALCIGFPPTWEKIK 178

Query: 700  VSSGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSINGKGKYREPTELDTNEM 521
            + SGHGRSK GAWRVYA  D+GR+LPGGS+VRDM+T FEVL +NGKG++REP    T+++
Sbjct: 179  ICSGHGRSKHGAWRVYAMPDIGRSLPGGSVVRDMSTQFEVLGVNGKGQFREPYNFFTDDI 238

Query: 520  ELVVVQEK--GAECTGDNEDE-ILVRAYPESGRTHQIRLHCQYLGIPIRGDVKYGGVDEW 350
            E + VQEK     C  D ++  ILVRAYP+SGRTHQIRLHCQYLG PIRGDVKYGGV EW
Sbjct: 239  ESITVQEKAPAQTCNDDVKNSVILVRAYPQSGRTHQIRLHCQYLGFPIRGDVKYGGVIEW 298

Query: 349  RGLTCDGHALHAESLSFKHPITGEYVQLSAPTPSW 245
             GL CDGHALHAESLSF HP+TG  V   +P PSW
Sbjct: 299  NGLECDGHALHAESLSFVHPVTGLPVTFQSPLPSW 333


>ref|XP_006664100.1| PREDICTED: RNA pseudouridine synthase 1-like [Oryza brachyantha]
          Length = 346

 Score =  372 bits (954), Expect = e-100
 Identities = 199/342 (58%), Positives = 240/342 (70%), Gaps = 21/342 (6%)
 Frame = -3

Query: 1198 MTRIPLT-SPN----ITSLPFTAVRFRSMVSASGSETLT------GXXXXXXXXXXPELS 1052
            MT++PL  SP     +T+ P      R   +A   + LT      G          P +S
Sbjct: 1    MTKLPLLLSPRAATALTTSPSLPPARRLAGAADADQALTMSAAEAGEYPVPVSPPYPAVS 60

Query: 1051 RELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLSSL------ASRP 890
            +++E++RA++A ARSA+Y   S  VVFED WLAVV+KPAG+YC+ LLS L      A+  
Sbjct: 61   KDVELRRAMTASARSAAYS--SATVVFEDEWLAVVDKPAGVYCDALLSVLPCPGSSAAAS 118

Query: 889  GSETSQSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKAYLALCIGRAPNWE 710
            G  +++ NLHLANRLDRDTSGLM+ITK NKVAGK VKAFT H+VKK YLALCIG  P WE
Sbjct: 119  GDTSTKPNLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTEHEVKKTYLALCIGCPPTWE 178

Query: 709  KIRVSSGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSINGKGKYREPTELDT 530
            KI++ SGHGRSK GAWRVYA SDVGR+LPGGS+VRDM+T FEVL ING  ++REP+ L+ 
Sbjct: 179  KIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTQFEVLGINGNCQFREPSNLEV 238

Query: 529  NEMELVVVQEKGAECTGD----NEDEILVRAYPESGRTHQIRLHCQYLGIPIRGDVKYGG 362
            +E+E + VQEK A+   +    N   ILVRAYP SGRTHQIRLHCQYLGIPIRGDVKYGG
Sbjct: 239  DEIESITVQEKAADLNSNSDVKNSSMILVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYGG 298

Query: 361  VDEWRGLTCDGHALHAESLSFKHPITGEYVQLSAPTPSWVYE 236
            V EW G+  DGHALHAESLSF HP+TG  V   +P  SW  E
Sbjct: 299  VIEWNGVDYDGHALHAESLSFVHPVTGLPVTFRSPLASWANE 340


>ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prunus persica]
            gi|462401230|gb|EMJ06787.1| hypothetical protein
            PRUPE_ppa008866mg [Prunus persica]
          Length = 316

 Score =  368 bits (945), Expect = 5e-99
 Identities = 180/277 (64%), Positives = 212/277 (76%), Gaps = 6/277 (2%)
 Frame = -3

Query: 1057 LSRELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLSSL------AS 896
            +S+ +E+ RA+SA ++S+ + L   DVVFED WL VVNKP G+YCE++L S+      ++
Sbjct: 33   ISKHIELARAMSASSKSSLFSLSRDDVVFEDQWLIVVNKPQGVYCESVLESVPQLLCDSA 92

Query: 895  RPGSETSQSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKAYLALCIGRAPN 716
              G+  +Q  LHLANRLDRDTSGLM+ITKS+KVA K VKAFT+HK+ K Y+A CIG AP 
Sbjct: 93   ESGTPANQLELHLANRLDRDTSGLMVITKSHKVASKLVKAFTDHKISKTYIARCIGSAPK 152

Query: 715  WEKIRVSSGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSINGKGKYREPTEL 536
            WE+I + SGHGRSKFGAWRVYA SDVGRTLPGGSMVRDM TSFEVLSING+G  +EP+E 
Sbjct: 153  WERITLKSGHGRSKFGAWRVYAASDVGRTLPGGSMVRDMETSFEVLSINGQGSLKEPSEF 212

Query: 535  DTNEMELVVVQEKGAECTGDNEDEILVRAYPESGRTHQIRLHCQYLGIPIRGDVKYGGVD 356
              +E   +VVQEK        +DEILVRA P SGRTHQIRLHCQYLGI IRGDVKY GV 
Sbjct: 213  KKDEANTIVVQEKAVIDKDTKKDEILVRARPRSGRTHQIRLHCQYLGISIRGDVKYEGVY 272

Query: 355  EWRGLTCDGHALHAESLSFKHPITGEYVQLSAPTPSW 245
            EW+G T DGH LHAESLSF+HPITG  V   AP PSW
Sbjct: 273  EWKGRTYDGHELHAESLSFEHPITGLPVMFQAPVPSW 309


>ref|XP_010259314.1| PREDICTED: RNA pseudouridine synthase 1 [Nelumbo nucifera]
            gi|720010654|ref|XP_010259315.1| PREDICTED: RNA
            pseudouridine synthase 1 [Nelumbo nucifera]
          Length = 402

 Score =  367 bits (943), Expect = 8e-99
 Identities = 177/288 (61%), Positives = 224/288 (77%), Gaps = 10/288 (3%)
 Frame = -3

Query: 1057 LSRELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLSSL-------- 902
            +S+++E+ RA+SA ++S+ + L   DV+FED WL VVNKP GIYCE++L+S+        
Sbjct: 109  ISKQMELARAMSASSKSSLFSLSLSDVLFEDEWLIVVNKPQGIYCESVLASVPRLWSNST 168

Query: 901  -ASRPGSETSQSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKAYLALCIGR 725
             +S   +E++   LHLANRLDRDTSG+M+ITKS+K+AGK VKAFT+HKV K Y+ LCIG 
Sbjct: 169  DSSTLRNESNPLELHLANRLDRDTSGVMVITKSHKIAGKLVKAFTDHKVSKTYVVLCIGA 228

Query: 724  APNWEKIRVSSGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSINGKGKYREP 545
            AP WE I + SGHGRSKFGAWRVYA SDVGRTLPGGS+VRDM TSFEVLS+NG+G +REP
Sbjct: 229  APKWETISIKSGHGRSKFGAWRVYAASDVGRTLPGGSVVRDMATSFEVLSVNGQGNFREP 288

Query: 544  TELDTNEMELVVVQEKGAECTGDN-EDEILVRAYPESGRTHQIRLHCQYLGIPIRGDVKY 368
            T+   +E E  +V+E+G   + D+ +DE+L+RAYP++GRTHQIRLHCQYL IPIRGDVKY
Sbjct: 289  TKHTISEEEFQLVEERGVSLSNDDKKDEMLIRAYPKNGRTHQIRLHCQYLRIPIRGDVKY 348

Query: 367  GGVDEWRGLTCDGHALHAESLSFKHPITGEYVQLSAPTPSWVYELYGA 224
             GV EWRG   DGHALHAESLSF HP+TG  V++ AP P W  + + A
Sbjct: 349  EGVYEWRGQMFDGHALHAESLSFSHPVTGLPVEVKAPLPLWAEQAFTA 396


>ref|XP_008245928.1| PREDICTED: RNA pseudouridine synthase 1 [Prunus mume]
          Length = 318

 Score =  367 bits (942), Expect = 1e-98
 Identities = 182/279 (65%), Positives = 211/279 (75%), Gaps = 8/279 (2%)
 Frame = -3

Query: 1057 LSRELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLSSLA------- 899
            +S+ +E+ RA+SA ++S+ + L   DVVFED WL VVNKP G+YCE++L S+        
Sbjct: 33   ISKHIELARAMSASSKSSLFSLSRDDVVFEDQWLIVVNKPQGVYCESVLESVPQLLCDSA 92

Query: 898  -SRPGSETSQSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKAYLALCIGRA 722
             S  G+  +Q  LHLANRLDRDTSGLM+ITKS+KVA K VKAFT+HK+ K Y+A CIG A
Sbjct: 93   ESVAGTPANQLELHLANRLDRDTSGLMVITKSHKVASKLVKAFTDHKISKTYIARCIGSA 152

Query: 721  PNWEKIRVSSGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSINGKGKYREPT 542
            P WE+I + SGHGRSKFGAWRVYA SDVGRTLPGGSMVRDM TSFEVLSING+G  +EP+
Sbjct: 153  PKWERITLKSGHGRSKFGAWRVYAASDVGRTLPGGSMVRDMETSFEVLSINGQGSLKEPS 212

Query: 541  ELDTNEMELVVVQEKGAECTGDNEDEILVRAYPESGRTHQIRLHCQYLGIPIRGDVKYGG 362
            E   +E   VVVQEK        +DEILVRA P SGRTHQIRLHCQYLGI IRGDVKY G
Sbjct: 213  EFKKDEANTVVVQEKAVIDKDTKKDEILVRARPRSGRTHQIRLHCQYLGISIRGDVKYEG 272

Query: 361  VDEWRGLTCDGHALHAESLSFKHPITGEYVQLSAPTPSW 245
            V EW+G T DGH LHAESLSF+HPITG  V   AP PSW
Sbjct: 273  VYEWKGRTYDGHELHAESLSFEHPITGLPVMFQAPVPSW 311


>ref|XP_008359854.1| PREDICTED: RNA pseudouridine synthase 1-like [Malus domestica]
          Length = 349

 Score =  362 bits (928), Expect = 5e-97
 Identities = 178/279 (63%), Positives = 208/279 (74%), Gaps = 8/279 (2%)
 Frame = -3

Query: 1057 LSRELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLSSLA------- 899
            +S+ +E+ RA+SA ++S  + L   DVV+ED WL VVNKP G+YCE++L S+        
Sbjct: 64   ISKHIELARAMSASSKSGLFSLSRNDVVYEDEWLIVVNKPQGVYCESVLESVPQLLCDSA 123

Query: 898  -SRPGSETSQSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKAYLALCIGRA 722
             S   + T Q  LHLANRLDRDTSGLMIITKS+KVA K VKAFT+HKV K Y+A C+G A
Sbjct: 124  ESVAETRTKQPELHLANRLDRDTSGLMIITKSHKVAAKLVKAFTDHKVSKTYIARCVGSA 183

Query: 721  PNWEKIRVSSGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSINGKGKYREPT 542
            P WE+I + SGHGRSKFGAWRVYA SDVGRTLPGGSMVRDM T FE+LS NG+G YREP+
Sbjct: 184  PKWERITLKSGHGRSKFGAWRVYAASDVGRTLPGGSMVRDMETXFEILSXNGQGSYREPS 243

Query: 541  ELDTNEMELVVVQEKGAECTGDNEDEILVRAYPESGRTHQIRLHCQYLGIPIRGDVKYGG 362
            E   +E  +VVV+EK        +DEILVRA P SGRTHQIRLHCQYLGI IRGDVKY G
Sbjct: 244  EFKKDEANVVVVEEKAVIDGDAKKDEILVRARPRSGRTHQIRLHCQYLGISIRGDVKYEG 303

Query: 361  VDEWRGLTCDGHALHAESLSFKHPITGEYVQLSAPTPSW 245
            V EW+G T DGH LHAESLS +HP+TG  V   AP PSW
Sbjct: 304  VYEWKGTTYDGHELHAESLSLEHPVTGLPVMFRAPVPSW 342


>ref|XP_009373279.1| PREDICTED: RNA pseudouridine synthase 1-like [Pyrus x bretschneideri]
          Length = 349

 Score =  360 bits (924), Expect = 1e-96
 Identities = 177/279 (63%), Positives = 210/279 (75%), Gaps = 8/279 (2%)
 Frame = -3

Query: 1057 LSRELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLSSLA------- 899
            +S+ +E+ RA+SA ++S+ + L   DVV+ED WL VVNKP G+YCE++L S+        
Sbjct: 64   ISKHIELARAMSASSKSSLFSLSRNDVVYEDEWLIVVNKPQGVYCESVLESVPQLLCDSA 123

Query: 898  -SRPGSETSQSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKAYLALCIGRA 722
             S   + T+Q  LHLANRLDRDTSGLMIITKS+KVA K VKAFT+HKV K Y+A C+G A
Sbjct: 124  ESVAETPTNQPELHLANRLDRDTSGLMIITKSHKVAAKLVKAFTDHKVSKTYIARCLGSA 183

Query: 721  PNWEKIRVSSGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSINGKGKYREPT 542
            P WE+I + SGHGRSKFGAWRVYA SDVGRTLPGGSMVRDM TSFE+LS+NG+G Y EP+
Sbjct: 184  PKWERITLKSGHGRSKFGAWRVYAASDVGRTLPGGSMVRDMETSFEILSVNGQGSYEEPS 243

Query: 541  ELDTNEMELVVVQEKGAECTGDNEDEILVRAYPESGRTHQIRLHCQYLGIPIRGDVKYGG 362
            E   +E  +VVV+EK        +DEILVRA P SGRTHQIRLHCQYLGI IRGDVKY G
Sbjct: 244  EFKKDEANVVVVEEKAVIDGDAKKDEILVRARPMSGRTHQIRLHCQYLGISIRGDVKYEG 303

Query: 361  VDEWRGLTCDGHALHAESLSFKHPITGEYVQLSAPTPSW 245
            V EW+G T D H LHAESLS +HP+TG  V   AP PSW
Sbjct: 304  VYEWKGTTYDSHELHAESLSLEHPVTGLPVMFRAPVPSW 342


>ref|XP_011466146.1| PREDICTED: RNA pseudouridine synthase 1 isoform X3 [Fragaria vesca
            subsp. vesca]
          Length = 352

 Score =  354 bits (909), Expect = 7e-95
 Identities = 177/281 (62%), Positives = 211/281 (75%), Gaps = 6/281 (2%)
 Frame = -3

Query: 1057 LSRELEMKRAVSAEARSASYELGSGDVVFEDTWLAVVNKPAGIYCETLLSSLA-----SR 893
            +S+ +E+ RA+SA ++S+ + L   DVV+ED WL VVNKP GIYCET+L S+      S 
Sbjct: 66   ISKNMELARAMSASSKSSLFTLSRNDVVYEDQWLIVVNKPQGIYCETVLESVPKLLAESA 125

Query: 892  PGSETSQSNLHLANRLDRDTSGLMIITKSNKVAGKFVKAFTNHKVKKAYLALCIGRAPNW 713
             G E     +HLANRLDRDTSG+MIITKS+KVA K VKAFT+HKV K Y+A CIG AP W
Sbjct: 126  AGLEGKAPEIHLANRLDRDTSGVMIITKSHKVAAKLVKAFTDHKVSKTYIACCIGSAPKW 185

Query: 712  EKIRVSSGHGRSKFGAWRVYATSDVGRTLPGGSMVRDMTTSFEVLSINGKGKYREPTELD 533
            E+I V SGHGRSKFGAWRVYA SDVGR LPGGS+VRDM TSFE+LSING+G +REP+E  
Sbjct: 186  ERITVKSGHGRSKFGAWRVYAASDVGRPLPGGSVVRDMETSFEILSINGQGCFREPSEFR 245

Query: 532  TNEMELVVVQEKGAECTGD-NEDEILVRAYPESGRTHQIRLHCQYLGIPIRGDVKYGGVD 356
             ++ +++VV+EK     GD  +DEILV A P SGRTHQIRLHCQYLGI IRGDVKY GV 
Sbjct: 246  IDDDKILVVEEKAVIIDGDAKKDEILVIARPRSGRTHQIRLHCQYLGISIRGDVKYEGVY 305

Query: 355  EWRGLTCDGHALHAESLSFKHPITGEYVQLSAPTPSWVYEL 233
            EW+G T  GH LHAES+S  HPITG  +   AP PSW  +L
Sbjct: 306  EWKGTTYGGHELHAESMSLDHPITGLPILFRAPLPSWANQL 346