BLASTX nr result
ID: Anemarrhena21_contig00008470
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00008470
(1355 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010930747.1| PREDICTED: replication factor C subunit 2 [E... 462 e-153
ref|XP_009393815.1| PREDICTED: replication factor C subunit 2 [M... 467 e-152
ref|XP_010063937.1| PREDICTED: replication factor C subunit 2 [E... 466 e-152
gb|KCW71234.1| hypothetical protein EUGRSUZ_F04332 [Eucalyptus g... 466 e-152
ref|XP_010269005.1| PREDICTED: replication factor C subunit 2 is... 469 e-151
ref|XP_008781582.1| PREDICTED: replication factor C subunit 2 [P... 465 e-151
ref|XP_010269006.1| PREDICTED: replication factor C subunit 2 is... 469 e-151
ref|XP_002520330.1| replication factor C / DNA polymerase III ga... 464 e-150
ref|XP_004250308.1| PREDICTED: replication factor C subunit 2 [S... 469 e-150
ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-li... 467 e-149
ref|XP_012452135.1| PREDICTED: replication factor C subunit 4 [G... 462 e-149
ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 [V... 465 e-148
ref|XP_002307456.1| replication factor C 37 kDa family protein [... 459 e-148
ref|XP_011003421.1| PREDICTED: replication factor C subunit 2 [P... 457 e-147
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera] 463 e-147
ref|XP_009796390.1| PREDICTED: replication factor C subunit 2 [N... 460 e-147
ref|XP_009343977.1| PREDICTED: replication factor C subunit 2 [P... 462 e-147
ref|XP_008219600.1| PREDICTED: replication factor C subunit 2 [P... 462 e-147
ref|XP_008338669.1| PREDICTED: replication factor C subunit 2 [M... 462 e-147
ref|XP_007019151.1| ATPase family associated with various cellul... 457 e-147
>ref|XP_010930747.1| PREDICTED: replication factor C subunit 2 [Elaeis guineensis]
Length = 341
Score = 462 bits (1188), Expect(2) = e-153
Identities = 235/280 (83%), Positives = 258/280 (92%), Gaps = 8/280 (2%)
Frame = -3
Query: 1221 MAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKTTTAL 1042
MAP+VPSSQ WVEKYRPKQVKDVA QDEV+RVLTNTLETA+CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPIVPSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60
Query: 1041 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRP-GYPCPPFKIII 865
AIA QL+GPE+YKSRVLELNASDDRGINVVRTKIKDFAAVAVGSG+R GYPCPP+KIII
Sbjct: 61 AIALQLYGPEMYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGSRQGGYPCPPYKIII 120
Query: 864 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSEEIMN 706
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS SRCAKFRFK LSEEIM+
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180
Query: 705 SRILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINVSVVI 526
+RILHICKEEGL LD EALS+LSSIS+GDLRRAITYLQSAARL+GS+IS+ DLI+VS VI
Sbjct: 181 NRILHICKEEGLTLDSEALSTLSSISQGDLRRAITYLQSAARLFGSTISSGDLISVSGVI 240
Query: 525 PQDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
PQD +Q+LF AC+SG+FD A+KEV+ +I+EGYPVSQML Q
Sbjct: 241 PQDVVQSLFMACKSGDFDVADKEVSNIIAEGYPVSQMLCQ 280
Score = 110 bits (276), Expect(2) = e-153
Identities = 50/56 (89%), Positives = 56/56 (100%)
Frame = -1
Query: 401 VNADDMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQELQFD 234
VNADD+SDEQKARICKKLGEADKCL+DGADEYLQL+DVASHTM+ALCNMP+EL+FD
Sbjct: 286 VNADDISDEQKARICKKLGEADKCLIDGADEYLQLMDVASHTMRALCNMPEELRFD 341
>ref|XP_009393815.1| PREDICTED: replication factor C subunit 2 [Musa acuminata subsp.
malaccensis]
Length = 340
Score = 467 bits (1202), Expect(2) = e-152
Identities = 236/279 (84%), Positives = 257/279 (92%), Gaps = 7/279 (2%)
Frame = -3
Query: 1221 MAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKTTTAL 1042
MAP+V SSQ WVEKYRP+QVKDVA QDEVIRVLTNTLETA+CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPVVQSSQPWVEKYRPRQVKDVAHQDEVIRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60
Query: 1041 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRPGYPCPPFKIIIL 862
AIAHQLFGPELY+SRVLELNASDDRGINVVRTKIKDFAAVAVGSG+R GYPCPP+KIIIL
Sbjct: 61 AIAHQLFGPELYRSRVLELNASDDRGINVVRTKIKDFAAVAVGSGSRQGYPCPPYKIIIL 120
Query: 861 DEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSEEIMNS 703
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS SRCAKFRFK LSE IM+S
Sbjct: 121 DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEGIMSS 180
Query: 702 RILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINVSVVIP 523
RILHIC EEGL LD EALS+LSSIS+GDLRRAITYLQSAARL+GSSI++KDLI+VS VIP
Sbjct: 181 RILHICSEEGLTLDSEALSTLSSISQGDLRRAITYLQSAARLFGSSITSKDLISVSGVIP 240
Query: 522 QDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
Q+ +QA+F AC+SG+FD ANKEVN +I+EGYPVSQ+L Q
Sbjct: 241 QEVVQAVFTACKSGDFDVANKEVNNVIAEGYPVSQLLYQ 279
Score = 102 bits (253), Expect(2) = e-152
Identities = 46/56 (82%), Positives = 54/56 (96%)
Frame = -1
Query: 401 VNADDMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQELQFD 234
VN DD+SDEQKARICKKLGEADKCL+DGADEYLQL+ VASHT++ALC+MP+EL+FD
Sbjct: 285 VNNDDISDEQKARICKKLGEADKCLIDGADEYLQLMAVASHTIRALCDMPEELRFD 340
>ref|XP_010063937.1| PREDICTED: replication factor C subunit 2 [Eucalyptus grandis]
gi|629105766|gb|KCW71235.1| hypothetical protein
EUGRSUZ_F04332 [Eucalyptus grandis]
Length = 342
Score = 466 bits (1200), Expect(2) = e-152
Identities = 238/280 (85%), Positives = 256/280 (91%), Gaps = 8/280 (2%)
Frame = -3
Query: 1221 MAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKTTTAL 1042
MAP++ SSQ WVEKYRPKQVKDVA QDEV+RVLTNTLETA+CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60
Query: 1041 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRP-GYPCPPFKIII 865
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSG R GYPCPP+KIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGGYPCPPYKIII 120
Query: 864 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSEEIMN 706
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS SRCAKFRFK LSEEIM
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMT 180
Query: 705 SRILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINVSVVI 526
SRILHICKEEGLNLD EALS++S+IS+GDLRRAITYLQ AARL+GSSI++KDLI+VS VI
Sbjct: 181 SRILHICKEEGLNLDAEALSTVSTISQGDLRRAITYLQGAARLFGSSITSKDLISVSGVI 240
Query: 525 PQDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
PQ+ + AL AAC+SG FD ANKEVN +I+EGYPVSQMLSQ
Sbjct: 241 PQEVVGALLAACKSGNFDLANKEVNNVIAEGYPVSQMLSQ 280
Score = 102 bits (254), Expect(2) = e-152
Identities = 47/56 (83%), Positives = 53/56 (94%)
Frame = -1
Query: 401 VNADDMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQELQFD 234
V ADD+SDEQKARICK+LGEADKCLVDGADEYLQLLDVAS+TM+ALCNMPQE ++
Sbjct: 286 VEADDISDEQKARICKRLGEADKCLVDGADEYLQLLDVASNTMRALCNMPQEFSYE 341
>gb|KCW71234.1| hypothetical protein EUGRSUZ_F04332 [Eucalyptus grandis]
Length = 362
Score = 466 bits (1198), Expect(2) = e-152
Identities = 240/285 (84%), Positives = 258/285 (90%), Gaps = 9/285 (3%)
Frame = -3
Query: 1233 REQEMAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKT 1054
R MAP++ SSQ WVEKYRPKQVKDVA QDEV+RVLTNTLETA+CPHMLFYGPPGTGKT
Sbjct: 16 RSLRMAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKT 75
Query: 1053 TTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRP-GYPCPPF 877
TTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSG R GYPCPP+
Sbjct: 76 TTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGGYPCPPY 135
Query: 876 KIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSE 718
KIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS SRCAKFRFK LSE
Sbjct: 136 KIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSE 195
Query: 717 EIMNSRILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINV 538
EIM SRILHICKEEGLNLD EALS++S+IS+GDLRRAITYLQ AARL+GSSI++KDLI+V
Sbjct: 196 EIMTSRILHICKEEGLNLDAEALSTVSTISQGDLRRAITYLQGAARLFGSSITSKDLISV 255
Query: 537 S-VVIPQDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
S VVIPQ+ + AL AAC+SG FD ANKEVN +I+EGYPVSQMLSQ
Sbjct: 256 SGVVIPQEVVGALLAACKSGNFDLANKEVNNVIAEGYPVSQMLSQ 300
Score = 102 bits (254), Expect(2) = e-152
Identities = 47/56 (83%), Positives = 53/56 (94%)
Frame = -1
Query: 401 VNADDMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQELQFD 234
V ADD+SDEQKARICK+LGEADKCLVDGADEYLQLLDVAS+TM+ALCNMPQE ++
Sbjct: 306 VEADDISDEQKARICKRLGEADKCLVDGADEYLQLLDVASNTMRALCNMPQEFSYE 361
>ref|XP_010269005.1| PREDICTED: replication factor C subunit 2 isoform X1 [Nelumbo
nucifera]
Length = 344
Score = 469 bits (1207), Expect(2) = e-151
Identities = 238/280 (85%), Positives = 259/280 (92%), Gaps = 8/280 (2%)
Frame = -3
Query: 1221 MAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKTTTAL 1042
MAP+VPSSQ WVEKYRPKQVKDVA QDEV+RVLTNTLET +CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPVVPSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60
Query: 1041 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRP-GYPCPPFKIII 865
AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSG R G+PCPP+KIII
Sbjct: 61 AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGGRQGGHPCPPYKIII 120
Query: 864 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSEEIMN 706
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS SRCAKFRFK LSE++M+
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDVMS 180
Query: 705 SRILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINVSVVI 526
SRI+HIC+EEGLNLD EA S+LSSIS+GDLRRAITYLQ AARL+GSSISAKDLI+VS VI
Sbjct: 181 SRIVHICREEGLNLDSEAFSTLSSISQGDLRRAITYLQGAARLFGSSISAKDLISVSGVI 240
Query: 525 PQDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
PQDA+QAL A+CRSG+F+ ANKEV+ +ISEGYPVSQMLSQ
Sbjct: 241 PQDAVQALLASCRSGDFELANKEVSNVISEGYPVSQMLSQ 280
Score = 96.3 bits (238), Expect(2) = e-151
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = -1
Query: 428 QFHRCSVXXVNADDMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQ 249
QF + V A+D+SDEQKARICK+L EADKCLVDGADEYLQL+DVAS+TM+ALCNMP
Sbjct: 280 QFCQLFEVIVEANDISDEQKARICKRLAEADKCLVDGADEYLQLMDVASNTMRALCNMPM 339
Query: 248 ELQFD 234
E ++
Sbjct: 340 EFSYE 344
>ref|XP_008781582.1| PREDICTED: replication factor C subunit 2 [Phoenix dactylifera]
Length = 341
Score = 465 bits (1196), Expect(2) = e-151
Identities = 235/280 (83%), Positives = 258/280 (92%), Gaps = 8/280 (2%)
Frame = -3
Query: 1221 MAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKTTTAL 1042
MAP+ PSSQ WVEKYRPKQVKDVA QDEV+RVLTNTLET++CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPVAPSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60
Query: 1041 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRP-GYPCPPFKIII 865
AIAHQL+GPE+YKSRVLELNASDDRGINVVRTKIKDFAAVAVGSG+R GYPCPP+KIII
Sbjct: 61 AIAHQLYGPEMYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGSRQGGYPCPPYKIII 120
Query: 864 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSEEIMN 706
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS SRCAKFRFK LSEEIM+
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180
Query: 705 SRILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINVSVVI 526
+RILHICK EGL LD EALS+LSSIS+GDLRRAITYLQSAARL+GS+IS KDLI+VS VI
Sbjct: 181 NRILHICKAEGLTLDSEALSTLSSISQGDLRRAITYLQSAARLFGSTISTKDLISVSGVI 240
Query: 525 PQDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
PQD +Q+LF AC+SG+FD A+KEV+ +I+EGYPVSQMLSQ
Sbjct: 241 PQDVVQSLFMACKSGDFDVADKEVSNIIAEGYPVSQMLSQ 280
Score = 100 bits (249), Expect(2) = e-151
Identities = 45/55 (81%), Positives = 51/55 (92%)
Frame = -1
Query: 401 VNADDMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQELQF 237
VNAD +SDEQKARICKKLGE+DKCL+DGADEYLQL+DVA H M+ALCNMP+EL F
Sbjct: 286 VNADKISDEQKARICKKLGESDKCLIDGADEYLQLMDVACHAMRALCNMPEELHF 340
>ref|XP_010269006.1| PREDICTED: replication factor C subunit 2 isoform X2 [Nelumbo
nucifera]
Length = 341
Score = 469 bits (1207), Expect(2) = e-151
Identities = 238/280 (85%), Positives = 259/280 (92%), Gaps = 8/280 (2%)
Frame = -3
Query: 1221 MAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKTTTAL 1042
MAP+VPSSQ WVEKYRPKQVKDVA QDEV+RVLTNTLET +CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPVVPSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60
Query: 1041 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRP-GYPCPPFKIII 865
AIAH+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSG R G+PCPP+KIII
Sbjct: 61 AIAHELFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGGRQGGHPCPPYKIII 120
Query: 864 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSEEIMN 706
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS SRCAKFRFK LSE++M+
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDVMS 180
Query: 705 SRILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINVSVVI 526
SRI+HIC+EEGLNLD EA S+LSSIS+GDLRRAITYLQ AARL+GSSISAKDLI+VS VI
Sbjct: 181 SRIVHICREEGLNLDSEAFSTLSSISQGDLRRAITYLQGAARLFGSSISAKDLISVSGVI 240
Query: 525 PQDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
PQDA+QAL A+CRSG+F+ ANKEV+ +ISEGYPVSQMLSQ
Sbjct: 241 PQDAVQALLASCRSGDFELANKEVSNVISEGYPVSQMLSQ 280
Score = 95.5 bits (236), Expect(2) = e-151
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = -1
Query: 401 VNADDMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQELQFD 234
V A+D+SDEQKARICK+L EADKCLVDGADEYLQL+DVAS+TM+ALCNMP E ++
Sbjct: 286 VEANDISDEQKARICKRLAEADKCLVDGADEYLQLMDVASNTMRALCNMPMEFSYE 341
>ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
[Ricinus communis] gi|223540549|gb|EEF42116.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 342
Score = 464 bits (1194), Expect(2) = e-150
Identities = 234/280 (83%), Positives = 258/280 (92%), Gaps = 8/280 (2%)
Frame = -3
Query: 1221 MAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKTTTAL 1042
MAP++ SSQ WVEKYRPKQVKDVA Q+EV+RVLTNTLET++CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPILQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60
Query: 1041 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRP-GYPCPPFKIII 865
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIK+FAAVAVGSG R GYPCPP+KIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGQRAGGYPCPPYKIII 120
Query: 864 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSEEIMN 706
LDEADSMTEDAQNALRRTMETYSKVTRFFF+CNYIS SRCAKFRFK LSEEIM+
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEEIMS 180
Query: 705 SRILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINVSVVI 526
SR+LHIC+EEGLNLD EALS+LS +S+GDLRRAITYLQ AARLYGS+IS+KDLI+VS VI
Sbjct: 181 SRVLHICREEGLNLDAEALSTLSYVSQGDLRRAITYLQGAARLYGSTISSKDLISVSGVI 240
Query: 525 PQDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
PQ+A+ AL+AACRSG+FD ANKEVN +I+EGYPVSQML Q
Sbjct: 241 PQEAVGALYAACRSGDFDMANKEVNNIIAEGYPVSQMLVQ 280
Score = 97.4 bits (241), Expect(2) = e-150
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = -1
Query: 401 VNADDMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQELQFD 234
V ADD+SDEQKA+ICK LG ADKCLVDGADEYLQLLDVAS+TM+ALCNMPQE ++
Sbjct: 286 VEADDISDEQKAQICKSLGAADKCLVDGADEYLQLLDVASNTMRALCNMPQEFPYE 341
>ref|XP_004250308.1| PREDICTED: replication factor C subunit 2 [Solanum lycopersicum]
Length = 339
Score = 469 bits (1206), Expect(2) = e-150
Identities = 237/279 (84%), Positives = 256/279 (91%), Gaps = 7/279 (2%)
Frame = -3
Query: 1221 MAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKTTTAL 1042
MAP++ SSQ WVEKYRPKQVKDVA QDEV+RVLTNTLET++CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPVMQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60
Query: 1041 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRPGYPCPPFKIIIL 862
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIK+FAAVAVGS + GYPCPPFKIIIL
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSNRQSGYPCPPFKIIIL 120
Query: 861 DEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSEEIMNS 703
DEADSMT+DAQNALRRTMETYSKVTRFFFICNYIS SRCAKFRFK L EEIM S
Sbjct: 121 DEADSMTQDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEIMGS 180
Query: 702 RILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINVSVVIP 523
RILHICKEEGLNLD EALS+LSSIS+GDLRRAITYLQSAARL+GSSISAK+LI+VS VIP
Sbjct: 181 RILHICKEEGLNLDSEALSTLSSISQGDLRRAITYLQSAARLFGSSISAKELISVSGVIP 240
Query: 522 QDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
+ +QA+F+ACRSG FD ANKEVN +I+EGYPVSQMLSQ
Sbjct: 241 NEVVQAIFSACRSGNFDLANKEVNNVIAEGYPVSQMLSQ 279
Score = 92.8 bits (229), Expect(2) = e-150
Identities = 44/55 (80%), Positives = 50/55 (90%)
Frame = -1
Query: 401 VNADDMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQELQF 237
V+ADD+SDEQKARICKK EADKCLVDGADEYLQLL+VAS TM+AL NMPQ++ F
Sbjct: 285 VDADDISDEQKARICKKFAEADKCLVDGADEYLQLLNVASSTMQALSNMPQDMTF 339
>ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-like [Solanum tuberosum]
Length = 339
Score = 467 bits (1201), Expect(2) = e-149
Identities = 235/279 (84%), Positives = 256/279 (91%), Gaps = 7/279 (2%)
Frame = -3
Query: 1221 MAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKTTTAL 1042
MAP++ SSQ WVEKYRPK+VKDVA QDEV+RVLTNTLET++CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPVMQSSQPWVEKYRPKKVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60
Query: 1041 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRPGYPCPPFKIIIL 862
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIK+FAAVAVGS + GYPCPPFKIIIL
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSNRQSGYPCPPFKIIIL 120
Query: 861 DEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSEEIMNS 703
DEADSMT+DAQNALRRTMETYSKVTRFFFICNYIS SRCAKFRFK L EE+M S
Sbjct: 121 DEADSMTQDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEVMGS 180
Query: 702 RILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINVSVVIP 523
RILHICKEEGLNLD EALS+LSSIS+GDLRRAITYLQSAARL+GSSISAK+LI+VS VIP
Sbjct: 181 RILHICKEEGLNLDSEALSTLSSISQGDLRRAITYLQSAARLFGSSISAKELISVSGVIP 240
Query: 522 QDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
+ +QA+F+ACRSG FD ANKEVN +I+EGYPVSQMLSQ
Sbjct: 241 NEVVQAMFSACRSGNFDLANKEVNNVIAEGYPVSQMLSQ 279
Score = 91.3 bits (225), Expect(2) = e-149
Identities = 43/55 (78%), Positives = 49/55 (89%)
Frame = -1
Query: 401 VNADDMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQELQF 237
V+ADD+SDEQKARICKK EADKCLVDGADEYLQLL+V S TM+AL NMPQ++ F
Sbjct: 285 VDADDISDEQKARICKKFAEADKCLVDGADEYLQLLNVVSSTMQALSNMPQDMAF 339
>ref|XP_012452135.1| PREDICTED: replication factor C subunit 4 [Gossypium raimondii]
gi|763797561|gb|KJB64516.1| hypothetical protein
B456_010G052800 [Gossypium raimondii]
Length = 342
Score = 462 bits (1190), Expect(2) = e-149
Identities = 235/280 (83%), Positives = 256/280 (91%), Gaps = 8/280 (2%)
Frame = -3
Query: 1221 MAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKTTTAL 1042
MAP++ SSQ WVEKYRPKQV+DVA QDEV+RVLTNTLETA+CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPVLQSSQPWVEKYRPKQVRDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60
Query: 1041 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRP-GYPCPPFKIII 865
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGS R GYPCPPFKIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSAQRQGGYPCPPFKIII 120
Query: 864 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSEEIMN 706
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS SRCAKFRFK LS+EIM+
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSDEIMS 180
Query: 705 SRILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINVSVVI 526
SRILHIC +EGLNLD EALS+LSSIS+GDLRRAITYLQ AARL+GSSIS+KDL++VS VI
Sbjct: 181 SRILHICDQEGLNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSSISSKDLLSVSGVI 240
Query: 525 PQDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
P + ++AL+AAC+SG FD ANKEVN +I+EGYPVSQMLSQ
Sbjct: 241 PVEVVEALYAACKSGNFDLANKEVNNIIAEGYPVSQMLSQ 280
Score = 94.0 bits (232), Expect(2) = e-149
Identities = 45/56 (80%), Positives = 49/56 (87%)
Frame = -1
Query: 401 VNADDMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQELQFD 234
V ADD+ DEQKARICK L EADK LVDGADEYLQLLDVAS+TM+ALCNMPQE F+
Sbjct: 286 VEADDVPDEQKARICKSLAEADKRLVDGADEYLQLLDVASNTMRALCNMPQEFSFE 341
>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 [Vitis vinifera]
gi|302141781|emb|CBI18984.3| unnamed protein product
[Vitis vinifera]
Length = 341
Score = 465 bits (1196), Expect(2) = e-148
Identities = 238/280 (85%), Positives = 255/280 (91%), Gaps = 8/280 (2%)
Frame = -3
Query: 1221 MAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKTTTAL 1042
MAP++ SSQ WVEKYRPKQVKDVA QDEV+RVLTNTLET +CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60
Query: 1041 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRP-GYPCPPFKIII 865
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSG R GYPCPP+KIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGGYPCPPYKIII 120
Query: 864 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSEEIMN 706
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS SRCAKFRFK LSEEIM+
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180
Query: 705 SRILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINVSVVI 526
SRILHICKEE LNLD EALS+LSSIS+GDLRRAITYLQ AARL+GS IS+KDLI+VS V+
Sbjct: 181 SRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVV 240
Query: 525 PQDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
PQ +QALFAAC+SG+FD ANKEVN +I+EGYPVSQML Q
Sbjct: 241 PQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQ 280
Score = 89.7 bits (221), Expect(2) = e-148
Identities = 41/48 (85%), Positives = 46/48 (95%)
Frame = -1
Query: 389 DMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQE 246
D+SDEQKARICK+L EADKCLVDGADEYLQLLDVAS+ M+ALCNMP+E
Sbjct: 289 DISDEQKARICKRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEE 336
>ref|XP_002307456.1| replication factor C 37 kDa family protein [Populus trichocarpa]
gi|222856905|gb|EEE94452.1| replication factor C 37 kDa
family protein [Populus trichocarpa]
Length = 342
Score = 459 bits (1182), Expect(2) = e-148
Identities = 231/280 (82%), Positives = 256/280 (91%), Gaps = 8/280 (2%)
Frame = -3
Query: 1221 MAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKTTTAL 1042
MAPL+ SSQQWVEKYRPKQ+KDVA QDEV+RVLTNTLETA+CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPLLQSSQQWVEKYRPKQIKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60
Query: 1041 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRPG-YPCPPFKIII 865
AIAHQL+GPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSG R G YPCPP+KIII
Sbjct: 61 AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGVYPCPPYKIII 120
Query: 864 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSEEIMN 706
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS SRCAKFRFK L EEIM+
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEIMS 180
Query: 705 SRILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINVSVVI 526
+RILHIC EEGL LD EALS+LSS+S+GDLRRAITYLQ AARL+GSSIS+KDLI+VS I
Sbjct: 181 NRILHICNEEGLTLDTEALSTLSSVSQGDLRRAITYLQGAARLFGSSISSKDLISVSGAI 240
Query: 525 PQDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
P++ +A++AAC++G+FD ANKEVN +I+EGYPVSQML+Q
Sbjct: 241 PREVTEAIYAACKNGDFDLANKEVNDVIAEGYPVSQMLAQ 280
Score = 94.4 bits (233), Expect(2) = e-148
Identities = 43/56 (76%), Positives = 48/56 (85%)
Frame = -1
Query: 401 VNADDMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQELQFD 234
V DD+SDEQKARICK L ADKCLVDGADEYLQLLDV S+TM++LCNMPQE +D
Sbjct: 286 VEVDDISDEQKARICKSLATADKCLVDGADEYLQLLDVVSNTMRSLCNMPQEFSYD 341
>ref|XP_011003421.1| PREDICTED: replication factor C subunit 2 [Populus euphratica]
Length = 342
Score = 457 bits (1177), Expect(2) = e-147
Identities = 231/280 (82%), Positives = 255/280 (91%), Gaps = 8/280 (2%)
Frame = -3
Query: 1221 MAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKTTTAL 1042
MAPL+ SSQ WVEKYRPKQVKDVA QDEV+RVLTNTLETA+CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60
Query: 1041 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRPG-YPCPPFKIII 865
AIAHQL+GPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSG R G YPCPP+KIII
Sbjct: 61 AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGVYPCPPYKIII 120
Query: 864 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSEEIMN 706
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS SRCAKFRFK L EEIM+
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKQLPEEIMS 180
Query: 705 SRILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINVSVVI 526
+RILHIC EEGL +D EALS+LSS+S+GDLRRAITYLQ AARL+GSSIS+KDLI+VS I
Sbjct: 181 NRILHICNEEGLTVDTEALSTLSSVSQGDLRRAITYLQGAARLFGSSISSKDLISVSGAI 240
Query: 525 PQDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
P++ +A++AAC+SG+FD ANKEVN +I+EGYPVSQML+Q
Sbjct: 241 PREVTEAIYAACKSGDFDLANKEVNYVIAEGYPVSQMLAQ 280
Score = 95.5 bits (236), Expect(2) = e-147
Identities = 44/56 (78%), Positives = 48/56 (85%)
Frame = -1
Query: 401 VNADDMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQELQFD 234
V DD+SDEQKARICK L ADKCLVDGADEYLQLLDV S+TM+ALCNMPQE +D
Sbjct: 286 VGVDDISDEQKARICKSLATADKCLVDGADEYLQLLDVVSNTMRALCNMPQEFSYD 341
>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
Length = 341
Score = 463 bits (1191), Expect(2) = e-147
Identities = 237/280 (84%), Positives = 254/280 (90%), Gaps = 8/280 (2%)
Frame = -3
Query: 1221 MAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKTTTAL 1042
MAP++ SSQ WVEKYRPKQVKDVA QDEV+RVLTNTLET +CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60
Query: 1041 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRP-GYPCPPFKIII 865
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAVGSG R GYPCPP+KIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAXVAVGSGHRQGGYPCPPYKIII 120
Query: 864 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSEEIMN 706
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS SRCAKFRFK LSEEIM+
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180
Query: 705 SRILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINVSVVI 526
SRILHICKEE LNLD EALS+LSSIS+GDLRRAITYLQ AARL+GS IS+KDLI+VS V+
Sbjct: 181 SRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVV 240
Query: 525 PQDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
PQ +QALFAAC+SG+FD ANKEVN +I+EGYPVSQML Q
Sbjct: 241 PQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQ 280
Score = 89.7 bits (221), Expect(2) = e-147
Identities = 41/48 (85%), Positives = 46/48 (95%)
Frame = -1
Query: 389 DMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQE 246
D+SDEQKARICK+L EADKCLVDGADEYLQLLDVAS+ M+ALCNMP+E
Sbjct: 289 DISDEQKARICKRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEE 336
>ref|XP_009796390.1| PREDICTED: replication factor C subunit 2 [Nicotiana sylvestris]
Length = 341
Score = 460 bits (1183), Expect(2) = e-147
Identities = 233/279 (83%), Positives = 255/279 (91%), Gaps = 7/279 (2%)
Frame = -3
Query: 1221 MAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKTTTAL 1042
MAP+V SSQ WVEKYRP+QVKDVA QDEV+RVLTNTLET++CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPVVQSSQPWVEKYRPRQVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60
Query: 1041 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRPGYPCPPFKIIIL 862
AIAHQLFGPE+YKSRVLELNASDDRGINVVRTKIK+FAAVAVGS + GYPCPPFKIIIL
Sbjct: 61 AIAHQLFGPEMYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSSRQGGYPCPPFKIIIL 120
Query: 861 DEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSEEIMNS 703
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS SRCAKFRFK L+EEIM S
Sbjct: 121 DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMGS 180
Query: 702 RILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINVSVVIP 523
RILHIC+EEGL+LD EALS+LSSIS+GDLRRAITYLQSAARL+GSSISA+ LI+VS VIP
Sbjct: 181 RILHICREEGLSLDSEALSTLSSISQGDLRRAITYLQSAARLFGSSISARVLISVSGVIP 240
Query: 522 QDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
+ QA+F+ACRSG FD ANKEV+ +I+EGYPVSQMLSQ
Sbjct: 241 NEVTQAIFSACRSGNFDLANKEVDNVIAEGYPVSQMLSQ 279
Score = 92.0 bits (227), Expect(2) = e-147
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = -1
Query: 401 VNADDMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQEL 243
++ADD+SDEQKARICKK EADKCLVDGADEYLQLLDVAS TM+AL NMPQ++
Sbjct: 285 IDADDISDEQKARICKKFAEADKCLVDGADEYLQLLDVASTTMQALTNMPQDM 337
>ref|XP_009343977.1| PREDICTED: replication factor C subunit 2 [Pyrus x bretschneideri]
Length = 339
Score = 462 bits (1189), Expect(2) = e-147
Identities = 233/280 (83%), Positives = 256/280 (91%), Gaps = 8/280 (2%)
Frame = -3
Query: 1221 MAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKTTTAL 1042
MAPLV SSQ WVEKYRP+QVKDVA QDEV+RVLTNTLET++CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPLVQSSQPWVEKYRPRQVKDVAQQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60
Query: 1041 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRP-GYPCPPFKIII 865
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVG RP GYPCPPFKIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGRNQRPGGYPCPPFKIII 120
Query: 864 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSEEIMN 706
LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYIS SRCAKFRFK LSE+IM
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDIMI 180
Query: 705 SRILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINVSVVI 526
+R+LHIC+EEGLNLDPEALS+LSSIS+GDLRRAITYLQSAARL+GSSIS+K+LI+VS V+
Sbjct: 181 TRVLHICQEEGLNLDPEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKELISVSGVV 240
Query: 525 PQDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
P++ ++A F+ACR FD ANKEVN +I+EGYPVSQMLSQ
Sbjct: 241 PEEVVEAFFSACRGDNFDLANKEVNNVIAEGYPVSQMLSQ 280
Score = 89.7 bits (221), Expect(2) = e-147
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -1
Query: 401 VNADDMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQE 246
V ADD+ DEQKARICKKLGEADKCLVDGADEYLQLLDVAS M+A+CNM ++
Sbjct: 286 VQADDILDEQKARICKKLGEADKCLVDGADEYLQLLDVASSMMRAVCNMQED 337
>ref|XP_008219600.1| PREDICTED: replication factor C subunit 2 [Prunus mume]
Length = 339
Score = 462 bits (1189), Expect(2) = e-147
Identities = 236/280 (84%), Positives = 253/280 (90%), Gaps = 8/280 (2%)
Frame = -3
Query: 1221 MAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKTTTAL 1042
MAPLV SSQ WVEKYRPKQVKDVA QDEV+RVLTNTLET++CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPLVQSSQPWVEKYRPKQVKDVAQQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60
Query: 1041 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRP-GYPCPPFKIII 865
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGS R GYPCPPFKIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSAQRQGGYPCPPFKIII 120
Query: 864 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSEEIMN 706
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS SRCAKFRFK LSEEIM
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMI 180
Query: 705 SRILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINVSVVI 526
SR+LHIC+EEGLNLDPE LS+LSSIS+GDLRRAITYLQSAARL+GSSIS K+LI+VS VI
Sbjct: 181 SRVLHICQEEGLNLDPEVLSTLSSISQGDLRRAITYLQSAARLFGSSISKKELISVSGVI 240
Query: 525 PQDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
P++ +++ FAAC FD ANKEVN +I+EGYPVSQMLSQ
Sbjct: 241 PEEVVESFFAACSGDNFDLANKEVNNVIAEGYPVSQMLSQ 280
Score = 89.4 bits (220), Expect(2) = e-147
Identities = 41/52 (78%), Positives = 48/52 (92%)
Frame = -1
Query: 401 VNADDMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQE 246
V +DD+SDEQKARICKK+GEADK LVDGADEYLQLLDVAS M+A+CNMP++
Sbjct: 286 VESDDISDEQKARICKKMGEADKRLVDGADEYLQLLDVASSVMRAMCNMPED 337
>ref|XP_008338669.1| PREDICTED: replication factor C subunit 2 [Malus domestica]
Length = 339
Score = 462 bits (1188), Expect(2) = e-147
Identities = 232/280 (82%), Positives = 257/280 (91%), Gaps = 8/280 (2%)
Frame = -3
Query: 1221 MAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKTTTAL 1042
MAPLV SSQ WVEKYRP+QVKDVA QDEV+RVLTNTLET++CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPLVQSSQPWVEKYRPRQVKDVAQQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60
Query: 1041 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRP-GYPCPPFKIII 865
AIAHQL+GPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVG+ RP GYPCPPFKIII
Sbjct: 61 AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRPGGYPCPPFKIII 120
Query: 864 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSEEIMN 706
LDEADSMTEDAQNALRRTMET+SKVTRFFFICNYIS SRCAKFRFK LSE+IM
Sbjct: 121 LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDIMI 180
Query: 705 SRILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINVSVVI 526
+R+LHIC+EEGLNLDPEALS+LSSIS+GDLRRAITYLQSAARL+GSSIS+K+LI+VS V+
Sbjct: 181 TRVLHICQEEGLNLDPEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKELISVSGVV 240
Query: 525 PQDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
P++ ++A F+ACR FD ANKEVN +I+EGYPVSQMLSQ
Sbjct: 241 PEEVVEAFFSACRGDNFDLANKEVNNVIAEGYPVSQMLSQ 280
Score = 89.7 bits (221), Expect(2) = e-147
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -1
Query: 401 VNADDMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQE 246
V ADD+ DEQKARICKKLGEADKCLVDGADEYLQLLDVAS M+A+CNM ++
Sbjct: 286 VQADDILDEQKARICKKLGEADKCLVDGADEYLQLLDVASSMMRAVCNMQED 337
>ref|XP_007019151.1| ATPase family associated with various cellular activities (AAA)
[Theobroma cacao] gi|508724479|gb|EOY16376.1| ATPase
family associated with various cellular activities (AAA)
[Theobroma cacao]
Length = 345
Score = 457 bits (1177), Expect(2) = e-147
Identities = 233/283 (82%), Positives = 259/283 (91%), Gaps = 11/283 (3%)
Frame = -3
Query: 1221 MAPLVPSSQQWVEKYRPKQVKDVASQDEVIRVLTNTLETASCPHMLFYGPPGTGKTTTAL 1042
MAP++ SSQ WVEKYRPKQVKDVA QDEV+RVLTNTLET++CPHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60
Query: 1041 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGTRP-GYPCPPFKIII 865
AIAHQLFGPELYKSRVLELNASD+RGINVVRTKIKDFAAVAVGSG R GYPCPPFKIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGSGQRQGGYPCPPFKIII 120
Query: 864 LDEADSMTEDAQ---NALRRTMETYSKVTRFFFICNYIS-------SRCAKFRFKSLSEE 715
LDEADSMTEDAQ NALRRTMETYSKVTRFFFICNYIS SRCAKFRFK+LSEE
Sbjct: 121 LDEADSMTEDAQACLNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKALSEE 180
Query: 714 IMNSRILHICKEEGLNLDPEALSSLSSISEGDLRRAITYLQSAARLYGSSISAKDLINVS 535
IM++R+LHIC EEGL+LD EALS+LSSIS+GDLRRAITYLQ AARL+GS+IS+KDL++VS
Sbjct: 181 IMSNRVLHICNEEGLHLDSEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLLSVS 240
Query: 534 VVIPQDAIQALFAACRSGEFDRANKEVNTLISEGYPVSQMLSQ 406
VIPQ+ ++AL+AAC+SG FD ANKEVN +I+EG+PVSQMLSQ
Sbjct: 241 GVIPQEVVEALYAACKSGNFDLANKEVNNVIAEGFPVSQMLSQ 283
Score = 92.8 bits (229), Expect(2) = e-147
Identities = 45/56 (80%), Positives = 49/56 (87%)
Frame = -1
Query: 401 VNADDMSDEQKARICKKLGEADKCLVDGADEYLQLLDVASHTMKALCNMPQELQFD 234
V ADD+ DEQKARICK L EADK LVDGADEYLQLLDVAS+TM+ALCNMPQE F+
Sbjct: 289 VEADDIPDEQKARICKSLAEADKRLVDGADEYLQLLDVASNTMRALCNMPQEFCFE 344