BLASTX nr result
ID: Anemarrhena21_contig00007698
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00007698
(3447 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008790175.1| PREDICTED: replication factor C subunit 1 is... 1222 0.0
ref|XP_008790185.1| PREDICTED: replication factor C subunit 1 is... 1221 0.0
ref|XP_010917920.1| PREDICTED: replication factor C subunit 1 is... 1218 0.0
ref|XP_010917922.1| PREDICTED: replication factor C subunit 1 is... 1214 0.0
ref|XP_008790189.1| PREDICTED: replication factor C subunit 1 is... 1212 0.0
ref|XP_008790193.1| PREDICTED: replication factor C subunit 1 is... 1162 0.0
ref|XP_010248015.1| PREDICTED: replication factor C subunit 1 is... 1151 0.0
ref|XP_010248008.1| PREDICTED: replication factor C subunit 1 is... 1149 0.0
ref|XP_009396468.1| PREDICTED: replication factor C subunit 1 is... 1145 0.0
ref|XP_009396469.1| PREDICTED: replication factor C subunit 1 is... 1135 0.0
ref|XP_009396464.1| PREDICTED: replication factor C subunit 1 is... 1135 0.0
ref|XP_010651545.1| PREDICTED: replication factor C subunit 1 [V... 1131 0.0
ref|XP_007010535.1| Replication factor C subunit 1 [Theobroma ca... 1101 0.0
ref|XP_011459476.1| PREDICTED: LOW QUALITY PROTEIN: replication ... 1070 0.0
ref|XP_008356391.1| PREDICTED: replication factor C subunit 1-li... 1067 0.0
ref|XP_008356392.1| PREDICTED: replication factor C subunit 1-li... 1066 0.0
ref|XP_008356388.1| PREDICTED: replication factor C subunit 1-li... 1066 0.0
gb|EEC68391.1| hypothetical protein OsI_36544 [Oryza sativa Indi... 1062 0.0
dbj|BAC76085.1| replication factor C 110 kDa subunit [Oryza sati... 1062 0.0
ref|NP_001068123.1| Os11g0572100 [Oryza sativa Japonica Group] g... 1062 0.0
>ref|XP_008790175.1| PREDICTED: replication factor C subunit 1 isoform X1 [Phoenix
dactylifera]
Length = 986
Score = 1222 bits (3161), Expect = 0.0
Identities = 654/962 (67%), Positives = 739/962 (76%), Gaps = 27/962 (2%)
Frame = -1
Query: 3069 SDIRKWFMKQHDKGNGSTKTNPSKPP----ENPSHSAVEKPVQGGQE---RRKTSKYFXX 2911
SDIRKWFMKQHDKGNG+ +KP E P ++K VQG QE RRKTSKYF
Sbjct: 3 SDIRKWFMKQHDKGNGTASKPAAKPAMAASEKPPAPVLDKSVQGAQENSGRRKTSKYFAT 62
Query: 2910 XXXXXXXXXXXAVKGEPGTEKTLTKRKAPQ------------------KAADDDVKPSPX 2785
K E TEK+ KRKA + K DDD PS
Sbjct: 63 TTATESSSKKT-TKDEKVTEKSPAKRKAQKITEDFQDDVKPVPAKKFHKDEDDDFVPSND 121
Query: 2784 XXXXXXXXXXXXXXXXXXXKVAEARPXXXXXXXXXXXXXXXXXXXTPTKSXXXXXXXRMS 2605
+++ TP K+ R +
Sbjct: 122 RKKAAEVKPSKKLNSRSSGGISK-NSVDKNDVDYDEDELDDKYVETPVKAGGRGRGGRGA 180
Query: 2604 GASTAPTAXXXXXXXXXXXGFMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGTLDSL 2425
GA A GFMNFGERKDPPHKGEKEVP GAP CLAGLTFVISGTLDSL
Sbjct: 181 GA-----AAGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPECLAGLTFVISGTLDSL 235
Query: 2424 EREEAEDLIKRHGGRVTGSISKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFDMIRK 2245
EREEAEDLIKRHGGRVTGSISKKT+FLLADEDIGGRKSSKAKELG FLTED LFDMIRK
Sbjct: 236 EREEAEDLIKRHGGRVTGSISKKTSFLLADEDIGGRKSSKAKELGIPFLTEDGLFDMIRK 295
Query: 2244 SKPAKTPVKEDTKKKSEEKADRSQIKSSPMKSEAKDDQPGSASRKSTMRSVQSGASPNKQ 2065
SKPAK PV+E+ KKK+ EK ++S IKS+P+K EAKD Q GS RK + V+S SP+K
Sbjct: 296 SKPAKAPVQEEQKKKTLEKVEKSPIKSTPLKVEAKD-QVGSVGRKDAAKIVKSSTSPDKP 354
Query: 2064 KARTSEGSSLMWTEKYRPKVPNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKKQNDS 1885
K ++++ SSL WT KYRPKVP++IIGNQS+VKQLHDWL HW+E FLH+GQKGKGKKQ DS
Sbjct: 355 KIQSADRSSLTWTVKYRPKVPDDIIGNQSLVKQLHDWLVHWNEQFLHTGQKGKGKKQADS 414
Query: 1884 GSKKAVLLSGTPGIGKSTTAKLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTSNSIK 1705
GSKKAVLLSG+PGIGKST+AKL+SQMLGFQAIEVNASDNRGKAD KI KG+GG+TSNSIK
Sbjct: 415 GSKKAVLLSGSPGIGKSTSAKLVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTSNSIK 474
Query: 1704 ELVSNEALSSSRDWSKHPKTVLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICICNDRY 1525
ELVSNEALS ++WSKHPK+VLIMDEVDGMS GDRGGVADLIASIK+SKIPIICICNDRY
Sbjct: 475 ELVSNEALSCRKNWSKHPKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRY 534
Query: 1524 SQKLKSLVNYCMLLTFRKPTKQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDMRMAI 1345
SQKLKSLVNYC+LL FRKPTKQQMAKRL+QIA AEGLQ+ N++ LEELA+RVNGDMRMAI
Sbjct: 535 SQKLKSLVNYCLLLNFRKPTKQQMAKRLKQIADAEGLQV-NEIALEELANRVNGDMRMAI 593
Query: 1344 NQLQYMSLSHSVIEYNDIRERLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDLSMSD 1165
NQLQYMSLS SVI Y+DIR+RLLSS+KDEDISPF AVDKLFG NGGKL M+ER+DLSMSD
Sbjct: 594 NQLQYMSLSQSVINYDDIRQRLLSSSKDEDISPFTAVDKLFGFNGGKLHMEERVDLSMSD 653
Query: 1164 PDLVPLIIQENYINYRPVCAGKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQWQLSQ 985
PDL+PLIIQENYINYRP GKD+NGVKR++L+A+AAESIGDGDI+NVQIRRYRQWQLSQ
Sbjct: 654 PDLIPLIIQENYINYRPSSIGKDDNGVKRMSLIARAAESIGDGDIVNVQIRRYRQWQLSQ 713
Query: 984 AGSFASCIIPAALMHGQRESLEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHILSSQA 805
AGSFASCIIPAALMHG RE+LEPGERNYNRFGGWLGKNSTMGKNLRLLED HIHIL+SQ
Sbjct: 714 AGSFASCIIPAALMHGHRETLEPGERNYNRFGGWLGKNSTMGKNLRLLEDVHIHILASQE 773
Query: 804 SNLDRVTLRIDYFPLLLKKLTHPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVELSKFQ 625
+N++R TLR+DYF LLLK+LT PLRV PK+ A Q+V+ELM+ YSLSQEDFDTIVE+SKF+
Sbjct: 774 ANMNRETLRVDYFTLLLKQLTDPLRVMPKEEAVQKVVELMDTYSLSQEDFDTIVEMSKFR 833
Query: 624 THPNPLDGIPPPVKAALTKAYKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPADAVD 445
HPNP++GI P VKAALTKAYK GS SRVVRAAD+I LPGLKKAPKKRIAA+LEP V+
Sbjct: 834 GHPNPMEGIQPAVKAALTKAYKQGSSSRVVRAADLIALPGLKKAPKKRIAAMLEP---VE 890
Query: 444 NSLTEENGDAFVXXXXXXXXXXXXXXEIKLN--GEAKPKLDLQSDKSKGIQVQLDLKNDE 271
L EENGDA ++ +N G AKP+LDL S+K KG+QV+LDLK++
Sbjct: 891 TGLAEENGDAVAEGEEEYSSDSEDTDDLGINADGGAKPQLDLLSNKPKGVQVELDLKSNG 950
Query: 270 KS 265
KS
Sbjct: 951 KS 952
>ref|XP_008790185.1| PREDICTED: replication factor C subunit 1 isoform X2 [Phoenix
dactylifera]
Length = 985
Score = 1221 bits (3158), Expect = 0.0
Identities = 654/961 (68%), Positives = 737/961 (76%), Gaps = 26/961 (2%)
Frame = -1
Query: 3069 SDIRKWFMKQHDKGNGSTKTNPSKPP----ENPSHSAVEKPVQGGQE---RRKTSKYFXX 2911
SDIRKWFMKQHDKGNG+ +KP E P ++K VQG QE RRKTSKYF
Sbjct: 3 SDIRKWFMKQHDKGNGTASKPAAKPAMAASEKPPAPVLDKSVQGAQENSGRRKTSKYFAT 62
Query: 2910 XXXXXXXXXXXAVKGEPGTEKTLTKRKAPQ------------------KAADDDVKPSPX 2785
K E TEK+ KRKA + K DDD PS
Sbjct: 63 TTATESSSKKT-TKDEKVTEKSPAKRKAQKITEDFQDDVKPVPAKKFHKDEDDDFVPSND 121
Query: 2784 XXXXXXXXXXXXXXXXXXXKVAEARPXXXXXXXXXXXXXXXXXXXTPTKSXXXXXXXRMS 2605
+++ TP K+ R +
Sbjct: 122 RKKAAEVKPSKKLNSRSSGGISK-NSVDKNDVDYDEDELDDKYVETPVKAGGRGRGGRGA 180
Query: 2604 GASTAPTAXXXXXXXXXXXGFMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGTLDSL 2425
GA A GFMNFGERKDPPHKGEKEVP GAP CLAGLTFVISGTLDSL
Sbjct: 181 GA-----AAGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPECLAGLTFVISGTLDSL 235
Query: 2424 EREEAEDLIKRHGGRVTGSISKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFDMIRK 2245
EREEAEDLIKRHGGRVTGSISKKT+FLLADEDIGGRKSSKAKELG FLTED LFDMIRK
Sbjct: 236 EREEAEDLIKRHGGRVTGSISKKTSFLLADEDIGGRKSSKAKELGIPFLTEDGLFDMIRK 295
Query: 2244 SKPAKTPVKEDTKKKSEEKADRSQIKSSPMKSEAKDDQPGSASRKSTMRSVQSGASPNKQ 2065
SKPAK PV+E+ KKK+ EK ++S IKS+P+K EAKD Q GS RK + V+S SP+K
Sbjct: 296 SKPAKAPVQEEQKKKTLEKVEKSPIKSTPLKVEAKD-QVGSVGRKDAAKIVKSSTSPDKP 354
Query: 2064 KARTSEGSSLMWTEKYRPKVPNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKKQNDS 1885
K ++++ SSL WT KYRPKVP++IIGNQS+VKQLHDWL HW+E FLH+GQKGKGKKQ DS
Sbjct: 355 KIQSADRSSLTWTVKYRPKVPDDIIGNQSLVKQLHDWLVHWNEQFLHTGQKGKGKKQADS 414
Query: 1884 GSKKAVLLSGTPGIGKSTTAKLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTSNSIK 1705
GSKKAVLLSG+PGIGKST+AKL+SQMLGFQAIEVNASDNRGKAD KI KG+GG+TSNSIK
Sbjct: 415 GSKKAVLLSGSPGIGKSTSAKLVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTSNSIK 474
Query: 1704 ELVSNEALSSSRDWSKHPKTVLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICICNDRY 1525
ELVSNEALS ++WSKHPK+VLIMDEVDGMS GDRGGVADLIASIK+SKIPIICICNDRY
Sbjct: 475 ELVSNEALSCRKNWSKHPKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRY 534
Query: 1524 SQKLKSLVNYCMLLTFRKPTKQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDMRMAI 1345
SQKLKSLVNYC+LL FRKPTKQQMAKRL+QIA AEGLQ+ N++ LEELA+RVNGDMRMAI
Sbjct: 535 SQKLKSLVNYCLLLNFRKPTKQQMAKRLKQIADAEGLQV-NEIALEELANRVNGDMRMAI 593
Query: 1344 NQLQYMSLSHSVIEYNDIRERLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDLSMSD 1165
NQLQYMSLS SVI Y+DIR+RLLSS+KDEDISPF AVDKLFG NGGKL M+ER+DLSMSD
Sbjct: 594 NQLQYMSLSQSVINYDDIRQRLLSSSKDEDISPFTAVDKLFGFNGGKLHMEERVDLSMSD 653
Query: 1164 PDLVPLIIQENYINYRPVCAGKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQWQLSQ 985
PDL+PLIIQENYINYRP GKD+NGVKR++L+A+AAESIGDGDI+NVQIRRYRQWQLSQ
Sbjct: 654 PDLIPLIIQENYINYRPSSIGKDDNGVKRMSLIARAAESIGDGDIVNVQIRRYRQWQLSQ 713
Query: 984 AGSFASCIIPAALMHGQRESLEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHILSSQA 805
AGSFASCIIPAALMHG RE+LEPGERNYNRFGGWLGKNSTMGKNLRLLED HIHIL+SQ
Sbjct: 714 AGSFASCIIPAALMHGHRETLEPGERNYNRFGGWLGKNSTMGKNLRLLEDVHIHILASQE 773
Query: 804 SNLDRVTLRIDYFPLLLKKLTHPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVELSKFQ 625
+N++R TLR+DYF LLLK+LT PLRV PK+ A Q+V+ELM+ YSLSQEDFDTIVE+SKF+
Sbjct: 774 ANMNRETLRVDYFTLLLKQLTDPLRVMPKEEAVQKVVELMDTYSLSQEDFDTIVEMSKFR 833
Query: 624 THPNPLDGIPPPVKAALTKAYKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPADAVD 445
HPNP++GI P VKAALTKAYK GS SRVVRAAD+I LPGLKKAPKKRIAA+LEP V+
Sbjct: 834 GHPNPMEGIQPAVKAALTKAYKQGSSSRVVRAADLIALPGLKKAPKKRIAAMLEP---VE 890
Query: 444 NSLTEENGDAFV-XXXXXXXXXXXXXXEIKLNGEAKPKLDLQSDKSKGIQVQLDLKNDEK 268
L EENGDA I +G AKP+LDL S+K KG+QV+LDLK++ K
Sbjct: 891 TGLAEENGDAVAEGEEEYSSDSEDTDLGINADGGAKPQLDLLSNKPKGVQVELDLKSNGK 950
Query: 267 S 265
S
Sbjct: 951 S 951
>ref|XP_010917920.1| PREDICTED: replication factor C subunit 1 isoform X1 [Elaeis
guineensis] gi|743775094|ref|XP_010917921.1| PREDICTED:
replication factor C subunit 1 isoform X1 [Elaeis
guineensis]
Length = 982
Score = 1218 bits (3151), Expect = 0.0
Identities = 658/966 (68%), Positives = 736/966 (76%), Gaps = 31/966 (3%)
Frame = -1
Query: 3069 SDIRKWFMKQHDKGNGSTKTNPSKPPENPSHSAVEKP--------VQGGQE---RRKTSK 2923
SDIRKWFMKQHDKGNG+ SKP P+ +A EKP VQG QE RRKTSK
Sbjct: 3 SDIRKWFMKQHDKGNGTA----SKPAAKPASAASEKPPSPVLDELVQGAQENSGRRKTSK 58
Query: 2922 YFXXXXXXXXXXXXXAVKGEPGTEKTLTKRKAPQ------------------KAADDDVK 2797
YF G+ T+K+ KRKA + K DDD
Sbjct: 59 YFATTTATESGSKQTTKDGKV-TQKSPAKRKAQKIREDFQDDVKPVPAKKFHKDEDDDFV 117
Query: 2796 PSPXXXXXXXXXXXXXXXXXXXXKVAEARPXXXXXXXXXXXXXXXXXXXTPTKSXXXXXX 2617
PS V++ TP K+
Sbjct: 118 PSNDKKKAAEVKPSKKLKSGSGGGVSK-NSVDKDDDDYDEDELDDKYVETPIKAGGRGRG 176
Query: 2616 XRMSGASTAPTAXXXXXXXXXXXGFMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGT 2437
R +GA A GFMNFGERKDPPHKGEKEVP GAP CLAGLTFVISGT
Sbjct: 177 GRGAGA-----AAGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPECLAGLTFVISGT 231
Query: 2436 LDSLEREEAEDLIKRHGGRVTGSISKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFD 2257
LDSLEREEAEDLIK HGGRVTGS+SK+T+FLLADEDIGGRKSSKAKELG FLTED LFD
Sbjct: 232 LDSLEREEAEDLIKHHGGRVTGSVSKRTSFLLADEDIGGRKSSKAKELGIPFLTEDGLFD 291
Query: 2256 MIRKSKPAKTPVKEDTKKKSEEKADRSQIKSSPMKSEAKDDQPGSASRKSTMRSVQSGAS 2077
MIRKSKPAK V+E+ KKK E +S IKS+P+K EAK D+ GS RK + V+SG S
Sbjct: 292 MIRKSKPAKAHVQEEQKKKVE----KSPIKSTPLKVEAKVDRVGSGGRKDAAKIVKSGTS 347
Query: 2076 PNKQKARTSEGSSLMWTEKYRPKVPNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKK 1897
P K K ++++ SSL WTEKYRPKVPN+IIGNQS+VKQLHDWL HW+E FLH+ QKGKGKK
Sbjct: 348 PGKPKIQSTDRSSLTWTEKYRPKVPNDIIGNQSLVKQLHDWLIHWNEQFLHTDQKGKGKK 407
Query: 1896 QNDSGSKKAVLLSGTPGIGKSTTAKLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTS 1717
Q DSGSKKAVLLSG+PGIGKST+AKL+SQMLGFQAIEVNASDNRGKAD KI KG+GG+TS
Sbjct: 408 QADSGSKKAVLLSGSPGIGKSTSAKLVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTS 467
Query: 1716 NSIKELVSNEALSSSRDWSKHPKTVLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICIC 1537
NSIKEL+SNEALS ++WSKHPK+VLIMDEVDGMS GDRGGVADLIASIK+SKIPIICIC
Sbjct: 468 NSIKELISNEALSCGKNWSKHPKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICIC 527
Query: 1536 NDRYSQKLKSLVNYCMLLTFRKPTKQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDM 1357
NDRYSQKLKSLVNYC+LL FRKPTKQQMAKRL+QIA AEGLQ+ N++ LEELADRVNGDM
Sbjct: 528 NDRYSQKLKSLVNYCLLLNFRKPTKQQMAKRLKQIADAEGLQV-NEIALEELADRVNGDM 586
Query: 1356 RMAINQLQYMSLSHSVIEYNDIRERLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDL 1177
RMAINQLQYMSLS SVI Y+DIR+RLLSS+KDEDISPF AVDKLFG NGGKLRMDERIDL
Sbjct: 587 RMAINQLQYMSLSQSVINYDDIRQRLLSSSKDEDISPFTAVDKLFGFNGGKLRMDERIDL 646
Query: 1176 SMSDPDLVPLIIQENYINYRPVCAGKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQW 997
SMSDPDLVPLIIQENYINYRP GKD+NGVKR+NLLA+AAESIGDGDI+NVQIRRYRQW
Sbjct: 647 SMSDPDLVPLIIQENYINYRPSSIGKDDNGVKRMNLLARAAESIGDGDIVNVQIRRYRQW 706
Query: 996 QLSQAGSFASCIIPAALMHGQRESLEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHIL 817
QLSQAGSFASCIIPAALMHG RE+LEPGERNYNRFGGWLGKNST GKNLRLLED HIHIL
Sbjct: 707 QLSQAGSFASCIIPAALMHGHRETLEPGERNYNRFGGWLGKNSTTGKNLRLLEDVHIHIL 766
Query: 816 SSQASNLDRVTLRIDYFPLLLKKLTHPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVEL 637
+SQ +N++R TLR+DYF LLLK+LT PLRV PK+ A Q+V+ELM+ YSLSQEDFDTIVEL
Sbjct: 767 ASQEANMNRETLRVDYFTLLLKQLTDPLRVMPKEEAVQKVVELMDTYSLSQEDFDTIVEL 826
Query: 636 SKFQTHPNPLDGIPPPVKAALTKAYKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPA 457
SKF+ HPNP++GI P VKAALTKAYK GS SRVVRAAD+ITLPG+KKAPKKRIAA+LEP
Sbjct: 827 SKFRGHPNPMEGIQPAVKAALTKAYKQGSSSRVVRAADLITLPGVKKAPKKRIAAMLEP- 885
Query: 456 DAVDNSLTEENGDAFVXXXXXXXXXXXXXXEI--KLNGEAKPKLDLQSDKSKGIQVQLDL 283
V+ L EENGDA ++ NGEAKP+LDL +K KG+QV+LDL
Sbjct: 886 --VEGGLAEENGDAVAEGEEEDSSDSEDTDDVGSNTNGEAKPQLDLLGNKPKGVQVELDL 943
Query: 282 KNDEKS 265
K++ KS
Sbjct: 944 KSNGKS 949
>ref|XP_010917922.1| PREDICTED: replication factor C subunit 1 isoform X2 [Elaeis
guineensis]
Length = 981
Score = 1214 bits (3142), Expect = 0.0
Identities = 658/966 (68%), Positives = 736/966 (76%), Gaps = 31/966 (3%)
Frame = -1
Query: 3069 SDIRKWFMKQHDKGNGSTKTNPSKPPENPSHSAVEKP--------VQGGQE---RRKTSK 2923
SDIRKWFMKQHDKGNG+ SKP P+ +A EKP VQG QE RRKTSK
Sbjct: 3 SDIRKWFMKQHDKGNGTA----SKPAAKPASAASEKPPSPVLDELVQGAQENSGRRKTSK 58
Query: 2922 YFXXXXXXXXXXXXXAVKGEPGTEKTLTKRKAPQ------------------KAADDDVK 2797
YF G+ T+K+ KRKA + K DDD
Sbjct: 59 YFATTTATESGSKQTTKDGKV-TQKSPAKRKAQKIREDFQDDVKPVPAKKFHKDEDDDFV 117
Query: 2796 PSPXXXXXXXXXXXXXXXXXXXXKVAEARPXXXXXXXXXXXXXXXXXXXTPTKSXXXXXX 2617
PS V++ TP K+
Sbjct: 118 PSNDKKKAAEVKPSKKLKSGSGGGVSK-NSVDKDDDDYDEDELDDKYVETPIKAGGRGRG 176
Query: 2616 XRMSGASTAPTAXXXXXXXXXXXGFMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGT 2437
R +GA A GFMNFGERKDPPHKGEKEVP GAP CLAGLTFVISGT
Sbjct: 177 GRGAGA-----AAGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPECLAGLTFVISGT 231
Query: 2436 LDSLEREEAEDLIKRHGGRVTGSISKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFD 2257
LDSLEREEAEDLIK HGGRVTGS+SK+T+FLLADEDIGGRKSSKAKELG FLTED LFD
Sbjct: 232 LDSLEREEAEDLIKHHGGRVTGSVSKRTSFLLADEDIGGRKSSKAKELGIPFLTEDGLFD 291
Query: 2256 MIRKSKPAKTPVKEDTKKKSEEKADRSQIKSSPMKSEAKDDQPGSASRKSTMRSVQSGAS 2077
MIRKSKPAK V+E+ KKK E +S IKS+P+K EAKD + GS RK + V+SG S
Sbjct: 292 MIRKSKPAKAHVQEEQKKKVE----KSPIKSTPLKVEAKD-RVGSGGRKDAAKIVKSGTS 346
Query: 2076 PNKQKARTSEGSSLMWTEKYRPKVPNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKK 1897
P K K ++++ SSL WTEKYRPKVPN+IIGNQS+VKQLHDWL HW+E FLH+ QKGKGKK
Sbjct: 347 PGKPKIQSTDRSSLTWTEKYRPKVPNDIIGNQSLVKQLHDWLIHWNEQFLHTDQKGKGKK 406
Query: 1896 QNDSGSKKAVLLSGTPGIGKSTTAKLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTS 1717
Q DSGSKKAVLLSG+PGIGKST+AKL+SQMLGFQAIEVNASDNRGKAD KI KG+GG+TS
Sbjct: 407 QADSGSKKAVLLSGSPGIGKSTSAKLVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTS 466
Query: 1716 NSIKELVSNEALSSSRDWSKHPKTVLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICIC 1537
NSIKEL+SNEALS ++WSKHPK+VLIMDEVDGMS GDRGGVADLIASIK+SKIPIICIC
Sbjct: 467 NSIKELISNEALSCGKNWSKHPKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICIC 526
Query: 1536 NDRYSQKLKSLVNYCMLLTFRKPTKQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDM 1357
NDRYSQKLKSLVNYC+LL FRKPTKQQMAKRL+QIA AEGLQ+ N++ LEELADRVNGDM
Sbjct: 527 NDRYSQKLKSLVNYCLLLNFRKPTKQQMAKRLKQIADAEGLQV-NEIALEELADRVNGDM 585
Query: 1356 RMAINQLQYMSLSHSVIEYNDIRERLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDL 1177
RMAINQLQYMSLS SVI Y+DIR+RLLSS+KDEDISPF AVDKLFG NGGKLRMDERIDL
Sbjct: 586 RMAINQLQYMSLSQSVINYDDIRQRLLSSSKDEDISPFTAVDKLFGFNGGKLRMDERIDL 645
Query: 1176 SMSDPDLVPLIIQENYINYRPVCAGKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQW 997
SMSDPDLVPLIIQENYINYRP GKD+NGVKR+NLLA+AAESIGDGDI+NVQIRRYRQW
Sbjct: 646 SMSDPDLVPLIIQENYINYRPSSIGKDDNGVKRMNLLARAAESIGDGDIVNVQIRRYRQW 705
Query: 996 QLSQAGSFASCIIPAALMHGQRESLEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHIL 817
QLSQAGSFASCIIPAALMHG RE+LEPGERNYNRFGGWLGKNST GKNLRLLED HIHIL
Sbjct: 706 QLSQAGSFASCIIPAALMHGHRETLEPGERNYNRFGGWLGKNSTTGKNLRLLEDVHIHIL 765
Query: 816 SSQASNLDRVTLRIDYFPLLLKKLTHPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVEL 637
+SQ +N++R TLR+DYF LLLK+LT PLRV PK+ A Q+V+ELM+ YSLSQEDFDTIVEL
Sbjct: 766 ASQEANMNRETLRVDYFTLLLKQLTDPLRVMPKEEAVQKVVELMDTYSLSQEDFDTIVEL 825
Query: 636 SKFQTHPNPLDGIPPPVKAALTKAYKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPA 457
SKF+ HPNP++GI P VKAALTKAYK GS SRVVRAAD+ITLPG+KKAPKKRIAA+LEP
Sbjct: 826 SKFRGHPNPMEGIQPAVKAALTKAYKQGSSSRVVRAADLITLPGVKKAPKKRIAAMLEP- 884
Query: 456 DAVDNSLTEENGDAFVXXXXXXXXXXXXXXEI--KLNGEAKPKLDLQSDKSKGIQVQLDL 283
V+ L EENGDA ++ NGEAKP+LDL +K KG+QV+LDL
Sbjct: 885 --VEGGLAEENGDAVAEGEEEDSSDSEDTDDVGSNTNGEAKPQLDLLGNKPKGVQVELDL 942
Query: 282 KNDEKS 265
K++ KS
Sbjct: 943 KSNGKS 948
>ref|XP_008790189.1| PREDICTED: replication factor C subunit 1 isoform X3 [Phoenix
dactylifera]
Length = 980
Score = 1212 bits (3136), Expect = 0.0
Identities = 650/962 (67%), Positives = 735/962 (76%), Gaps = 27/962 (2%)
Frame = -1
Query: 3069 SDIRKWFMKQHDKGNGSTKTNPSKPP----ENPSHSAVEKPVQGGQE---RRKTSKYFXX 2911
SDIRKWFMKQHDKGNG+ +KP E P ++K VQG QE RRKTSKYF
Sbjct: 3 SDIRKWFMKQHDKGNGTASKPAAKPAMAASEKPPAPVLDKSVQGAQENSGRRKTSKYFAT 62
Query: 2910 XXXXXXXXXXXAVKGEPGTEKTLTKRKAPQ------------------KAADDDVKPSPX 2785
K E TEK+ KRKA + K DDD PS
Sbjct: 63 TTATESSSKKT-TKDEKVTEKSPAKRKAQKITEDFQDDVKPVPAKKFHKDEDDDFVPSND 121
Query: 2784 XXXXXXXXXXXXXXXXXXXKVAEARPXXXXXXXXXXXXXXXXXXXTPTKSXXXXXXXRMS 2605
+++ TP K+ R +
Sbjct: 122 RKKAAEVKPSKKLNSRSSGGISK-NSVDKNDVDYDEDELDDKYVETPVKAGGRGRGGRGA 180
Query: 2604 GASTAPTAXXXXXXXXXXXGFMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGTLDSL 2425
GA A GFMNFGERKDPPHKGEKEVP GAP CLAGLTFVISGTLDSL
Sbjct: 181 GA-----AAGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPECLAGLTFVISGTLDSL 235
Query: 2424 EREEAEDLIKRHGGRVTGSISKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFDMIRK 2245
EREEAEDLIKRHGGRVTGSISKKT+FLLADEDIGGRKSSKAKELG FLTED LFDMIRK
Sbjct: 236 EREEAEDLIKRHGGRVTGSISKKTSFLLADEDIGGRKSSKAKELGIPFLTEDGLFDMIRK 295
Query: 2244 SKPAKTPVKEDTKKKSEEKADRSQIKSSPMKSEAKDDQPGSASRKSTMRSVQSGASPNKQ 2065
SKPAK PV+E+ KKK+ EK ++S IKS+P+K EAK RK + V+S SP+K
Sbjct: 296 SKPAKAPVQEEQKKKTLEKVEKSPIKSTPLKVEAK-------GRKDAAKIVKSSTSPDKP 348
Query: 2064 KARTSEGSSLMWTEKYRPKVPNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKKQNDS 1885
K ++++ SSL WT KYRPKVP++IIGNQS+VKQLHDWL HW+E FLH+GQKGKGKKQ DS
Sbjct: 349 KIQSADRSSLTWTVKYRPKVPDDIIGNQSLVKQLHDWLVHWNEQFLHTGQKGKGKKQADS 408
Query: 1884 GSKKAVLLSGTPGIGKSTTAKLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTSNSIK 1705
GSKKAVLLSG+PGIGKST+AKL+SQMLGFQAIEVNASDNRGKAD KI KG+GG+TSNSIK
Sbjct: 409 GSKKAVLLSGSPGIGKSTSAKLVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTSNSIK 468
Query: 1704 ELVSNEALSSSRDWSKHPKTVLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICICNDRY 1525
ELVSNEALS ++WSKHPK+VLIMDEVDGMS GDRGGVADLIASIK+SKIPIICICNDRY
Sbjct: 469 ELVSNEALSCRKNWSKHPKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRY 528
Query: 1524 SQKLKSLVNYCMLLTFRKPTKQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDMRMAI 1345
SQKLKSLVNYC+LL FRKPTKQQMAKRL+QIA AEGLQ+ N++ LEELA+RVNGDMRMAI
Sbjct: 529 SQKLKSLVNYCLLLNFRKPTKQQMAKRLKQIADAEGLQV-NEIALEELANRVNGDMRMAI 587
Query: 1344 NQLQYMSLSHSVIEYNDIRERLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDLSMSD 1165
NQLQYMSLS SVI Y+DIR+RLLSS+KDEDISPF AVDKLFG NGGKL M+ER+DLSMSD
Sbjct: 588 NQLQYMSLSQSVINYDDIRQRLLSSSKDEDISPFTAVDKLFGFNGGKLHMEERVDLSMSD 647
Query: 1164 PDLVPLIIQENYINYRPVCAGKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQWQLSQ 985
PDL+PLIIQENYINYRP GKD+NGVKR++L+A+AAESIGDGDI+NVQIRRYRQWQLSQ
Sbjct: 648 PDLIPLIIQENYINYRPSSIGKDDNGVKRMSLIARAAESIGDGDIVNVQIRRYRQWQLSQ 707
Query: 984 AGSFASCIIPAALMHGQRESLEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHILSSQA 805
AGSFASCIIPAALMHG RE+LEPGERNYNRFGGWLGKNSTMGKNLRLLED HIHIL+SQ
Sbjct: 708 AGSFASCIIPAALMHGHRETLEPGERNYNRFGGWLGKNSTMGKNLRLLEDVHIHILASQE 767
Query: 804 SNLDRVTLRIDYFPLLLKKLTHPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVELSKFQ 625
+N++R TLR+DYF LLLK+LT PLRV PK+ A Q+V+ELM+ YSLSQEDFDTIVE+SKF+
Sbjct: 768 ANMNRETLRVDYFTLLLKQLTDPLRVMPKEEAVQKVVELMDTYSLSQEDFDTIVEMSKFR 827
Query: 624 THPNPLDGIPPPVKAALTKAYKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPADAVD 445
HPNP++GI P VKAALTKAYK GS SRVVRAAD+I LPGLKKAPKKRIAA+LEP V+
Sbjct: 828 GHPNPMEGIQPAVKAALTKAYKQGSSSRVVRAADLIALPGLKKAPKKRIAAMLEP---VE 884
Query: 444 NSLTEENGDAFVXXXXXXXXXXXXXXEIKLN--GEAKPKLDLQSDKSKGIQVQLDLKNDE 271
L EENGDA ++ +N G AKP+LDL S+K KG+QV+LDLK++
Sbjct: 885 TGLAEENGDAVAEGEEEYSSDSEDTDDLGINADGGAKPQLDLLSNKPKGVQVELDLKSNG 944
Query: 270 KS 265
KS
Sbjct: 945 KS 946
>ref|XP_008790193.1| PREDICTED: replication factor C subunit 1 isoform X4 [Phoenix
dactylifera]
Length = 955
Score = 1162 bits (3007), Expect = 0.0
Identities = 632/962 (65%), Positives = 711/962 (73%), Gaps = 27/962 (2%)
Frame = -1
Query: 3069 SDIRKWFMKQHDKGNGSTKTNPSKPP----ENPSHSAVEKPVQGGQE---RRKTSKYFXX 2911
SDIRKWFMKQHDKGNG+ +KP E P ++K VQG QE RRKTSKYF
Sbjct: 3 SDIRKWFMKQHDKGNGTASKPAAKPAMAASEKPPAPVLDKSVQGAQENSGRRKTSKYFAT 62
Query: 2910 XXXXXXXXXXXAVKGEPGTEKTLTKRKAPQ------------------KAADDDVKPSPX 2785
K E TEK+ KRKA + K DDD PS
Sbjct: 63 TTATESSSKKT-TKDEKVTEKSPAKRKAQKITEDFQDDVKPVPAKKFHKDEDDDFVPSND 121
Query: 2784 XXXXXXXXXXXXXXXXXXXKVAEARPXXXXXXXXXXXXXXXXXXXTPTKSXXXXXXXRMS 2605
+++ TP K+ R +
Sbjct: 122 RKKAAEVKPSKKLNSRSSGGISK-NSVDKNDVDYDEDELDDKYVETPVKAGGRGRGGRGA 180
Query: 2604 GASTAPTAXXXXXXXXXXXGFMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGTLDSL 2425
GA A GFMNFGERKDPPHKGEKEVP GAP CLAGLTFVISGTLDSL
Sbjct: 181 GA-----AAGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPECLAGLTFVISGTLDSL 235
Query: 2424 EREEAEDLIKRHGGRVTGSISKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFDMIRK 2245
EREEAEDLIKRHGGRVTGSISKKT+FLLADEDIGGRKSSKAKELG FLTED LFDMIRK
Sbjct: 236 EREEAEDLIKRHGGRVTGSISKKTSFLLADEDIGGRKSSKAKELGIPFLTEDGLFDMIRK 295
Query: 2244 SKPAKTPVKEDTKKKSEEKADRSQIKSSPMKSEAKDDQPGSASRKSTMRSVQSGASPNKQ 2065
SKPAK PV+E+ KKK+ EK ++S IKS+P+K EAKD Q GS RK + V+S SP+K
Sbjct: 296 SKPAKAPVQEEQKKKTLEKVEKSPIKSTPLKVEAKD-QVGSVGRKDAAKIVKSSTSPDKP 354
Query: 2064 KARTSEGSSLMWTEKYRPKVPNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKKQNDS 1885
K ++++ SSL WT KYRPKVP++IIGNQS+VKQLHDWL HW+E FLH+GQKGKGKKQ DS
Sbjct: 355 KIQSADRSSLTWTVKYRPKVPDDIIGNQSLVKQLHDWLVHWNEQFLHTGQKGKGKKQADS 414
Query: 1884 GSKKAVLLSGTPGIGKSTTAKLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTSNSIK 1705
GSKKAVLLSG+PGIGKST+AKL+SQMLGFQAIEVNASDNRGKAD KI KG+GG+TSNSIK
Sbjct: 415 GSKKAVLLSGSPGIGKSTSAKLVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTSNSIK 474
Query: 1704 ELVSNEALSSSRDWSKHPKTVLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICICNDRY 1525
ELVSNEALS ++WSKHPK+VLIMDEVDGMS GDRGGVADLIASIK+SKIPIICICNDRY
Sbjct: 475 ELVSNEALSCRKNWSKHPKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRY 534
Query: 1524 SQKLKSLVNYCMLLTFRKPTKQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDMRMAI 1345
SQKLKSLVNYC+LL FRKPTKQQMAKRL+QIA AEGLQ+ N++ LEELA+RVNGDMRMAI
Sbjct: 535 SQKLKSLVNYCLLLNFRKPTKQQMAKRLKQIADAEGLQV-NEIALEELANRVNGDMRMAI 593
Query: 1344 NQLQYMSLSHSVIEYNDIRERLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDLSMSD 1165
NQLQYMSLS SVI Y+DIR+RLLSS+KDEDISPF AVDKLFG NGGKL M+ER+DLSMSD
Sbjct: 594 NQLQYMSLSQSVINYDDIRQRLLSSSKDEDISPFTAVDKLFGFNGGKLHMEERVDLSMSD 653
Query: 1164 PDLVPLIIQENYINYRPVCAGKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQWQLSQ 985
PDL+PLIIQENYINYRP GKD+NGVKR++L+A+AAESIGDGDI+NVQIRRYRQWQLSQ
Sbjct: 654 PDLIPLIIQENYINYRPSSIGKDDNGVKRMSLIARAAESIGDGDIVNVQIRRYRQWQLSQ 713
Query: 984 AGSFASCIIPAALMHGQRESLEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHILSSQA 805
AGSFASCIIPAALMHG RE+LEPGERNYNRFGGWLGKNSTMGKNLRLLED HIHIL+SQ
Sbjct: 714 AGSFASCIIPAALMHGHRETLEPGERNYNRFGGWLGKNSTMGKNLRLLEDVHIHILASQE 773
Query: 804 SNLDRVTLRIDYFPLLLKKLTHPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVELSKFQ 625
+N++R TLR+DYF LLLK+LT PLRV PK
Sbjct: 774 ANMNRETLRVDYFTLLLKQLTDPLRVMPKG------------------------------ 803
Query: 624 THPNPLDGIPPPVKAALTKAYKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPADAVD 445
HPNP++GI P VKAALTKAYK GS SRVVRAAD+I LPGLKKAPKKRIAA+LEP V+
Sbjct: 804 -HPNPMEGIQPAVKAALTKAYKQGSSSRVVRAADLIALPGLKKAPKKRIAAMLEP---VE 859
Query: 444 NSLTEENGDAFVXXXXXXXXXXXXXXEIKLN--GEAKPKLDLQSDKSKGIQVQLDLKNDE 271
L EENGDA ++ +N G AKP+LDL S+K KG+QV+LDLK++
Sbjct: 860 TGLAEENGDAVAEGEEEYSSDSEDTDDLGINADGGAKPQLDLLSNKPKGVQVELDLKSNG 919
Query: 270 KS 265
KS
Sbjct: 920 KS 921
>ref|XP_010248015.1| PREDICTED: replication factor C subunit 1 isoform X2 [Nelumbo
nucifera]
Length = 974
Score = 1151 bits (2978), Expect = 0.0
Identities = 625/961 (65%), Positives = 715/961 (74%), Gaps = 24/961 (2%)
Frame = -1
Query: 3072 MSDIRKWFMKQHDKGNGSTKTNPSKP------PEN--PSHSAVEKPVQG---GQERRKTS 2926
MSDIRKWFMK+HDKGNG+ P KP PE P+ ++ +KPV G RRKTS
Sbjct: 1 MSDIRKWFMKKHDKGNGNA-AKPEKPNTATSQPETSPPAAASPDKPVHESGEGSGRRKTS 59
Query: 2925 KYFXXXXXXXXXXXXXAVKGEPGTEKTLTKRKAPQKAADD---DVKPSPXXXXXXXXXXX 2755
KYF K E E T KRK +K+ ++ DVKP
Sbjct: 60 KYFATDSQKP--------KDEKEIECTPAKRKT-EKSREELNCDVKPPSAKRVHKGDEDE 110
Query: 2754 XXXXXXXXXKVAEARPXXXXXXXXXXXXXXXXXXXTPT----------KSXXXXXXXRMS 2605
A+ P + KS
Sbjct: 111 DFVLPSLKKNSAKDTPTKKLKSGSGKGIAQKSVDSDESDEEVPDDKTVKSPFKAAGRGAG 170
Query: 2604 GASTAPTAXXXXXXXXXXXGFMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGTLDSL 2425
G A GFMNFGERKDPPHKGEKE+P GAP+CLAGLTFVISGTLDSL
Sbjct: 171 GRGAAAAPAGGRGRGGGRGGFMNFGERKDPPHKGEKEIPEGAPDCLAGLTFVISGTLDSL 230
Query: 2424 EREEAEDLIKRHGGRVTGSISKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFDMIRK 2245
EREEAEDLIKRHGGRVTGS+SKKTN+LLADEDIGGRKS+KAKELGT+FLTED LFD+IR
Sbjct: 231 EREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIGGRKSTKAKELGTAFLTEDGLFDLIRA 290
Query: 2244 SKPAKTPVKEDTKKKSEEKADRSQIKSSPMKSEAKDDQPGSASRKSTMRSVQSGASPNKQ 2065
SKPAK PV+E+ KKK+ +KA S K SP K E KD + +RK + SG S KQ
Sbjct: 291 SKPAKPPVREEPKKKTADKAVESLPKRSPKKVERKDQGGSALARKVGPTNSASGVSLAKQ 350
Query: 2064 KARTSEGSSLMWTEKYRPKVPNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKKQNDS 1885
+T G SL WTEKYRPK+PN+IIGNQS+VKQLHDWLA+W+E FLH+ +KGKGKKQND
Sbjct: 351 NGQTV-GHSLTWTEKYRPKLPNDIIGNQSLVKQLHDWLANWNEQFLHTAKKGKGKKQNDG 409
Query: 1884 GSKKAVLLSGTPGIGKSTTAKLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTSNSIK 1705
G+KKAVL+SGTPGIGK+T+AK++SQMLGFQAIEVNASDNRGKAD KIFKGIGGST+NS+K
Sbjct: 410 GAKKAVLISGTPGIGKTTSAKVVSQMLGFQAIEVNASDNRGKADAKIFKGIGGSTANSVK 469
Query: 1704 ELVSNEALSSSRDWSKHPKTVLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICICNDRY 1525
ELVSNEALS++ D SKH KTVLIMDEVDGMS GDRGGVADLIASIK+SKIPIICICNDRY
Sbjct: 470 ELVSNEALSANLDRSKHSKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRY 529
Query: 1524 SQKLKSLVNYCMLLTFRKPTKQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDMRMAI 1345
SQKLKSLVNYC++LTFRKPTKQQMAKRL QIA+ EGLQ+ N++ LEELA+RVNGDMRMA+
Sbjct: 530 SQKLKSLVNYCLVLTFRKPTKQQMAKRLLQIANNEGLQV-NEIALEELAERVNGDMRMAL 588
Query: 1344 NQLQYMSLSHSVIEYNDIRERLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDLSMSD 1165
NQLQYMSLS SVI+Y+DIR RLL+SAKDEDISPF AVDKLFG NGGKLRMDERIDLSMSD
Sbjct: 589 NQLQYMSLSMSVIKYDDIRNRLLNSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSD 648
Query: 1164 PDLVPLIIQENYINYRPVCAGKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQWQLSQ 985
PDLVPLIIQENYINY P AGKD+NG+KR+NLLA+AAESI DGDIINVQIRRYRQWQLSQ
Sbjct: 649 PDLVPLIIQENYINYVPSFAGKDDNGIKRMNLLARAAESIADGDIINVQIRRYRQWQLSQ 708
Query: 984 AGSFASCIIPAALMHGQRESLEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHILSSQA 805
SFASCIIPAAL+HG+RE+LE GERN+NRFGGWLGKNST+GKNLRLLED H H+L+S+
Sbjct: 709 TSSFASCIIPAALLHGRRETLEQGERNFNRFGGWLGKNSTVGKNLRLLEDVHAHLLASRE 768
Query: 804 SNLDRVTLRIDYFPLLLKKLTHPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVELSKFQ 625
N DR TLR+DYF LLLK+LT PL+ KD A Q V+ELM+ YS++Q+DFDTIVELSKFQ
Sbjct: 769 YNSDRETLRVDYFTLLLKRLTEPLQTLSKDEAVQNVVELMDAYSINQDDFDTIVELSKFQ 828
Query: 624 THPNPLDGIPPPVKAALTKAYKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPADAVD 445
H NPLDGIPP VKAALTKAYK GS RVVR+AD+ITLPG+KKAPKKR+AA+LEP V+
Sbjct: 829 GHRNPLDGIPPAVKAALTKAYKQGSSLRVVRSADLITLPGIKKAPKKRVAAMLEP---VE 885
Query: 444 NSLTEENGDAFVXXXXXXXXXXXXXXEIKLNGEAKPKLDLQSDKSKGIQVQLDLKNDEKS 265
++L EE+ DA I + + K+D QS+ SKGIQV+LDLKN S
Sbjct: 886 DTLAEEDDDALAESEEENSSDTEDMENI----DKQLKMDFQSNSSKGIQVKLDLKNTGNS 941
Query: 264 N 262
N
Sbjct: 942 N 942
>ref|XP_010248008.1| PREDICTED: replication factor C subunit 1 isoform X1 [Nelumbo
nucifera]
Length = 975
Score = 1149 bits (2973), Expect = 0.0
Identities = 624/960 (65%), Positives = 714/960 (74%), Gaps = 24/960 (2%)
Frame = -1
Query: 3069 SDIRKWFMKQHDKGNGSTKTNPSKP------PEN--PSHSAVEKPVQG---GQERRKTSK 2923
SDIRKWFMK+HDKGNG+ P KP PE P+ ++ +KPV G RRKTSK
Sbjct: 3 SDIRKWFMKKHDKGNGNA-AKPEKPNTATSQPETSPPAAASPDKPVHESGEGSGRRKTSK 61
Query: 2922 YFXXXXXXXXXXXXXAVKGEPGTEKTLTKRKAPQKAADD---DVKPSPXXXXXXXXXXXX 2752
YF K E E T KRK +K+ ++ DVKP
Sbjct: 62 YFATDSQKP--------KDEKEIECTPAKRKT-EKSREELNCDVKPPSAKRVHKGDEDED 112
Query: 2751 XXXXXXXXKVAEARPXXXXXXXXXXXXXXXXXXXTPT----------KSXXXXXXXRMSG 2602
A+ P + KS G
Sbjct: 113 FVLPSLKKNSAKDTPTKKLKSGSGKGIAQKSVDSDESDEEVPDDKTVKSPFKAAGRGAGG 172
Query: 2601 ASTAPTAXXXXXXXXXXXGFMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGTLDSLE 2422
A GFMNFGERKDPPHKGEKE+P GAP+CLAGLTFVISGTLDSLE
Sbjct: 173 RGAAAAPAGGRGRGGGRGGFMNFGERKDPPHKGEKEIPEGAPDCLAGLTFVISGTLDSLE 232
Query: 2421 REEAEDLIKRHGGRVTGSISKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFDMIRKS 2242
REEAEDLIKRHGGRVTGS+SKKTN+LLADEDIGGRKS+KAKELGT+FLTED LFD+IR S
Sbjct: 233 REEAEDLIKRHGGRVTGSVSKKTNYLLADEDIGGRKSTKAKELGTAFLTEDGLFDLIRAS 292
Query: 2241 KPAKTPVKEDTKKKSEEKADRSQIKSSPMKSEAKDDQPGSASRKSTMRSVQSGASPNKQK 2062
KPAK PV+E+ KKK+ +KA S K SP K E KD + +RK + SG S KQ
Sbjct: 293 KPAKPPVREEPKKKTADKAVESLPKRSPKKVERKDQGGSALARKVGPTNSASGVSLAKQN 352
Query: 2061 ARTSEGSSLMWTEKYRPKVPNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKKQNDSG 1882
+T G SL WTEKYRPK+PN+IIGNQS+VKQLHDWLA+W+E FLH+ +KGKGKKQND G
Sbjct: 353 GQTV-GHSLTWTEKYRPKLPNDIIGNQSLVKQLHDWLANWNEQFLHTAKKGKGKKQNDGG 411
Query: 1881 SKKAVLLSGTPGIGKSTTAKLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTSNSIKE 1702
+KKAVL+SGTPGIGK+T+AK++SQMLGFQAIEVNASDNRGKAD KIFKGIGGST+NS+KE
Sbjct: 412 AKKAVLISGTPGIGKTTSAKVVSQMLGFQAIEVNASDNRGKADAKIFKGIGGSTANSVKE 471
Query: 1701 LVSNEALSSSRDWSKHPKTVLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICICNDRYS 1522
LVSNEALS++ D SKH KTVLIMDEVDGMS GDRGGVADLIASIK+SKIPIICICNDRYS
Sbjct: 472 LVSNEALSANLDRSKHSKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYS 531
Query: 1521 QKLKSLVNYCMLLTFRKPTKQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDMRMAIN 1342
QKLKSLVNYC++LTFRKPTKQQMAKRL QIA+ EGLQ+ N++ LEELA+RVNGDMRMA+N
Sbjct: 532 QKLKSLVNYCLVLTFRKPTKQQMAKRLLQIANNEGLQV-NEIALEELAERVNGDMRMALN 590
Query: 1341 QLQYMSLSHSVIEYNDIRERLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDLSMSDP 1162
QLQYMSLS SVI+Y+DIR RLL+SAKDEDISPF AVDKLFG NGGKLRMDERIDLSMSDP
Sbjct: 591 QLQYMSLSMSVIKYDDIRNRLLNSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDP 650
Query: 1161 DLVPLIIQENYINYRPVCAGKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQWQLSQA 982
DLVPLIIQENYINY P AGKD+NG+KR+NLLA+AAESI DGDIINVQIRRYRQWQLSQ
Sbjct: 651 DLVPLIIQENYINYVPSFAGKDDNGIKRMNLLARAAESIADGDIINVQIRRYRQWQLSQT 710
Query: 981 GSFASCIIPAALMHGQRESLEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHILSSQAS 802
SFASCIIPAAL+HG+RE+LE GERN+NRFGGWLGKNST+GKNLRLLED H H+L+S+
Sbjct: 711 SSFASCIIPAALLHGRRETLEQGERNFNRFGGWLGKNSTVGKNLRLLEDVHAHLLASREY 770
Query: 801 NLDRVTLRIDYFPLLLKKLTHPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVELSKFQT 622
N DR TLR+DYF LLLK+LT PL+ KD A Q V+ELM+ YS++Q+DFDTIVELSKFQ
Sbjct: 771 NSDRETLRVDYFTLLLKRLTEPLQTLSKDEAVQNVVELMDAYSINQDDFDTIVELSKFQG 830
Query: 621 HPNPLDGIPPPVKAALTKAYKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPADAVDN 442
H NPLDGIPP VKAALTKAYK GS RVVR+AD+ITLPG+KKAPKKR+AA+LEP V++
Sbjct: 831 HRNPLDGIPPAVKAALTKAYKQGSSLRVVRSADLITLPGIKKAPKKRVAAMLEP---VED 887
Query: 441 SLTEENGDAFVXXXXXXXXXXXXXXEIKLNGEAKPKLDLQSDKSKGIQVQLDLKNDEKSN 262
+L EE+ DA I + + K+D QS+ SKGIQV+LDLKN SN
Sbjct: 888 TLAEEDDDALAESEEENSSDTEDMENI----DKQLKMDFQSNSSKGIQVKLDLKNTGNSN 943
>ref|XP_009396468.1| PREDICTED: replication factor C subunit 1 isoform X2 [Musa acuminata
subsp. malaccensis]
Length = 986
Score = 1145 bits (2961), Expect = 0.0
Identities = 577/762 (75%), Positives = 654/762 (85%), Gaps = 1/762 (0%)
Frame = -1
Query: 2544 FMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSI 2365
+MNFGERKDPPHKGEKEVP G+P CL LTFVISGTLDSLEREEAEDLIKRHGGRVT ++
Sbjct: 199 YMNFGERKDPPHKGEKEVPEGSPECLNSLTFVISGTLDSLEREEAEDLIKRHGGRVTSAV 258
Query: 2364 SKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFDMIRKSKPAKTPVKEDTKKKSEEKA 2185
SKKT+FLLADED+GGRKSSKAKELG FLTED LFD IRKSKPAK ++E+ KK+S EK
Sbjct: 259 SKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDKIRKSKPAKAQMQEEKKKRSPEKM 318
Query: 2184 DRSQIKSSPMKSEAKDDQPGSASRKSTMRSVQSGASPNKQKARTSEGSSLMWTEKYRPKV 2005
D+ I SP K E KDD+ S RK ++V+SG SP+K+K+++ + SSL WTEKYRPK+
Sbjct: 319 DKPIINKSPRKVEVKDDKAVSIGRKDAAKNVKSGISPDKRKSQSGDRSSLTWTEKYRPKL 378
Query: 2004 PNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKKQNDSGSKKAVLLSGTPGIGKSTTA 1825
PN+IIGNQSIVKQLHDWL W E+FLH+GQKGKGKKQ+DSGSKKAVLLSG+PGIGKST+A
Sbjct: 379 PNDIIGNQSIVKQLHDWLMTWDEHFLHAGQKGKGKKQSDSGSKKAVLLSGSPGIGKSTSA 438
Query: 1824 KLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTSNSIKELVSNEALSSSRDWSKHPKT 1645
KL+SQM+GFQAIEVNASD+RGKAD KI KGIGGSTSNSIKELVSNE ++SS DWSK K+
Sbjct: 439 KLVSQMIGFQAIEVNASDSRGKADAKIGKGIGGSTSNSIKELVSNEIVNSSSDWSKRQKS 498
Query: 1644 VLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICICNDRYSQKLKSLVNYCMLLTFRKPT 1465
VLIMDEVDGMS GDRGGVADLIASIK+SKIPIICICNDRYSQKLKSLVNYC+ L +RKPT
Sbjct: 499 VLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNYRKPT 558
Query: 1464 KQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDMRMAINQLQYMSLSHSVIEYNDIRE 1285
KQQMAKRL+QIA AEGLQI N++ LEELA+RVNGDMRMAINQLQYMS+S S I Y+DIR+
Sbjct: 559 KQQMAKRLKQIADAEGLQI-NEVALEELAERVNGDMRMAINQLQYMSISKSAINYDDIRQ 617
Query: 1284 RLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDLSMSDPDLVPLIIQENYINYRPVCA 1105
RLLSSAKDEDISPF AVDKLFG NGGKLRMDERIDLSMSDPDLVPLI+QENYINYRP
Sbjct: 618 RLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIVQENYINYRPTSI 677
Query: 1104 GKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQWQLSQAGSFASCIIPAALMHGQRES 925
GKDENGVKR+ LAQAAESIGDGDI NVQIRRYRQWQLSQ+ SFASCIIPAALMHG RE+
Sbjct: 678 GKDENGVKRMQFLAQAAESIGDGDIFNVQIRRYRQWQLSQSSSFASCIIPAALMHGHRET 737
Query: 924 LEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHILSSQASNLDRVTLRIDYFPLLLKKL 745
LEPGERN+NRFGGWLGKNSTMGKNLRLLED H+H L+SQ + LDR TLR+DY LLLK+L
Sbjct: 738 LEPGERNFNRFGGWLGKNSTMGKNLRLLEDVHVHFLASQEAKLDRATLRVDYLTLLLKQL 797
Query: 744 THPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVELSKFQTHPNPLDGIPPPVKAALTKA 565
T PL++ PK+ A Q+V+E M+ YSL+QEDFDTIVELSKF+ HPNP+D I P VK+ALTKA
Sbjct: 798 TDPLQMMPKEVAVQKVVEFMDAYSLTQEDFDTIVELSKFKGHPNPMDNIQPAVKSALTKA 857
Query: 564 YKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPADAVDNSLTEENGDAFV-XXXXXXX 388
YK GS SRVVR+AD+ITLPGLKKAPKKRIAAILEP V++ ++EENG+A
Sbjct: 858 YKQGSSSRVVRSADLITLPGLKKAPKKRIAAILEP---VEDGVSEENGEALAENEEENSD 914
Query: 387 XXXXXXXEIKLNGEAKPKLDLQSDKSKGIQVQLDLKNDEKSN 262
+ N + KP+LDL S+K KG+QVQLDLKN+ KSN
Sbjct: 915 SEDADDLGLGTNADQKPQLDLLSNKPKGVQVQLDLKNNGKSN 956
Score = 70.1 bits (170), Expect = 1e-08
Identities = 51/105 (48%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Frame = -1
Query: 3069 SDIRKWFMKQHDKGNGSTKTNPSKP----PENPSHSAVEKP--VQGGQE---RRKTSKYF 2917
SDIRKWFMKQHDKG+GS SKP P+ PS + +KP VQ QE RRKTSKYF
Sbjct: 3 SDIRKWFMKQHDKGSGSVSKPASKPATAVPDKPSPLSSQKPNQVQATQENSGRRKTSKYF 62
Query: 2916 XXXXXXXXXXXXXAVKGEPGTEKTLTKRKAPQKAAD--DDVKPSP 2788
VK E KT KRK + D DD+KPSP
Sbjct: 63 -TTSTAKEVNSKETVK-EKVEAKTPPKRKTRKSIEDLPDDIKPSP 105
>ref|XP_009396469.1| PREDICTED: replication factor C subunit 1 isoform X3 [Musa acuminata
subsp. malaccensis] gi|695018978|ref|XP_009396470.1|
PREDICTED: replication factor C subunit 1 isoform X3
[Musa acuminata subsp. malaccensis]
gi|695018980|ref|XP_009396471.1| PREDICTED: replication
factor C subunit 1 isoform X3 [Musa acuminata subsp.
malaccensis]
Length = 985
Score = 1135 bits (2936), Expect = 0.0
Identities = 576/763 (75%), Positives = 653/763 (85%), Gaps = 2/763 (0%)
Frame = -1
Query: 2544 FMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSI 2365
+MNFGERKDPPHKGEKEVP G+P CL LTFVISGTLDSLEREEAEDLIKRHGGRVT ++
Sbjct: 197 YMNFGERKDPPHKGEKEVPEGSPECLNSLTFVISGTLDSLEREEAEDLIKRHGGRVTSAV 256
Query: 2364 SKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFDMIRKSKPAKTPVKEDTKKKSEEKA 2185
SKKT+FLLADED+GGRKSSKAKELG FLTED LFD IRKSKPAK ++E+ KK+S EK
Sbjct: 257 SKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDKIRKSKPAKAQMQEEKKKRSPEKM 316
Query: 2184 DRSQIKSSPMKSEAKDDQPGSASRKSTMRSVQSGASPNKQKARTSEGSSLMWTEKYRPKV 2005
D+ I SP K E KDD+ S RK ++V+SG SP+K+K+++ + SSL WTEKYRPK+
Sbjct: 317 DKPIINKSPRKVEVKDDKAVSIGRKDAAKNVKSGISPDKRKSQSGDRSSLTWTEKYRPKL 376
Query: 2004 PNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKKQNDSGSKKAVLLSGTPGIGKSTTA 1825
PN+IIGNQSIVKQLHDWL W E+FLH+GQKGKGKKQ+DSGSKKAVLLSG+PGIGKST+A
Sbjct: 377 PNDIIGNQSIVKQLHDWLMTWDEHFLHAGQKGKGKKQSDSGSKKAVLLSGSPGIGKSTSA 436
Query: 1824 KLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTSNSIKELVSNEALSSSRDW-SKHPK 1648
KL+SQM+GFQAIEVNASD+RGKAD KI KGIGGSTSNSIKELVSNE ++SS D SK K
Sbjct: 437 KLVSQMIGFQAIEVNASDSRGKADAKIGKGIGGSTSNSIKELVSNEIVNSSSDCRSKRQK 496
Query: 1647 TVLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICICNDRYSQKLKSLVNYCMLLTFRKP 1468
+VLIMDEVDGMS GDRGGVADLIASIK+SKIPIICICNDRYSQKLKSLVNYC+ L +RKP
Sbjct: 497 SVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNYRKP 556
Query: 1467 TKQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDMRMAINQLQYMSLSHSVIEYNDIR 1288
TKQQMAKRL+QIA AEGLQI N++ LEELA+RVNGDMRMAINQLQYMS+S S I Y+DIR
Sbjct: 557 TKQQMAKRLKQIADAEGLQI-NEVALEELAERVNGDMRMAINQLQYMSISKSAINYDDIR 615
Query: 1287 ERLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDLSMSDPDLVPLIIQENYINYRPVC 1108
+RLLSSAKDEDISPF AVDKLFG NGGKLRMDERIDLSMSDPDLVPLI+QENYINYRP
Sbjct: 616 QRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIVQENYINYRPTS 675
Query: 1107 AGKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQWQLSQAGSFASCIIPAALMHGQRE 928
GKDENGVKR+ LAQAAESIGDGDI NVQIRRYRQWQLSQ+ SFASCIIPAALMHG RE
Sbjct: 676 IGKDENGVKRMQFLAQAAESIGDGDIFNVQIRRYRQWQLSQSSSFASCIIPAALMHGHRE 735
Query: 927 SLEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHILSSQASNLDRVTLRIDYFPLLLKK 748
+LEPGERN+NRFGGWLGKNSTMGKNLRLLED H+H L+SQ + LDR TLR+DY LLLK+
Sbjct: 736 TLEPGERNFNRFGGWLGKNSTMGKNLRLLEDVHVHFLASQEAKLDRATLRVDYLTLLLKQ 795
Query: 747 LTHPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVELSKFQTHPNPLDGIPPPVKAALTK 568
LT PL++ PK+ A Q+V+E M+ YSL+QEDFDTIVELSKF+ HPNP+D I P VK+ALTK
Sbjct: 796 LTDPLQMMPKEVAVQKVVEFMDAYSLTQEDFDTIVELSKFKGHPNPMDNIQPAVKSALTK 855
Query: 567 AYKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPADAVDNSLTEENGDAFV-XXXXXX 391
AYK GS SRVVR+AD+ITLPGLKKAPKKRIAAILEP V++ ++EENG+A
Sbjct: 856 AYKQGSSSRVVRSADLITLPGLKKAPKKRIAAILEP---VEDGVSEENGEALAENEEENS 912
Query: 390 XXXXXXXXEIKLNGEAKPKLDLQSDKSKGIQVQLDLKNDEKSN 262
+ N + KP+LDL S+K KG+QVQLDLKN+ KSN
Sbjct: 913 DSEDADDLGLGTNADQKPQLDLLSNKPKGVQVQLDLKNNGKSN 955
Score = 75.1 bits (183), Expect = 4e-10
Identities = 51/103 (49%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Frame = -1
Query: 3069 SDIRKWFMKQHDKGNGSTKTNPSKP----PENPSHSAVEKPVQGGQE---RRKTSKYFXX 2911
SDIRKWFMKQHDKG+GS SKP P+ PS + +KPVQ QE RRKTSKYF
Sbjct: 3 SDIRKWFMKQHDKGSGSVSKPASKPATAVPDKPSPLSSQKPVQATQENSGRRKTSKYF-T 61
Query: 2910 XXXXXXXXXXXAVKGEPGTEKTLTKRKAPQKAAD--DDVKPSP 2788
VK E KT KRK + D DD+KPSP
Sbjct: 62 TSTAKEVNSKETVK-EKVEAKTPPKRKTRKSIEDLPDDIKPSP 103
>ref|XP_009396464.1| PREDICTED: replication factor C subunit 1 isoform X1 [Musa acuminata
subsp. malaccensis] gi|695018968|ref|XP_009396465.1|
PREDICTED: replication factor C subunit 1 isoform X1
[Musa acuminata subsp. malaccensis]
gi|695018970|ref|XP_009396466.1| PREDICTED: replication
factor C subunit 1 isoform X1 [Musa acuminata subsp.
malaccensis] gi|695018972|ref|XP_009396467.1| PREDICTED:
replication factor C subunit 1 isoform X1 [Musa acuminata
subsp. malaccensis]
Length = 987
Score = 1135 bits (2936), Expect = 0.0
Identities = 576/763 (75%), Positives = 653/763 (85%), Gaps = 2/763 (0%)
Frame = -1
Query: 2544 FMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSI 2365
+MNFGERKDPPHKGEKEVP G+P CL LTFVISGTLDSLEREEAEDLIKRHGGRVT ++
Sbjct: 199 YMNFGERKDPPHKGEKEVPEGSPECLNSLTFVISGTLDSLEREEAEDLIKRHGGRVTSAV 258
Query: 2364 SKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFDMIRKSKPAKTPVKEDTKKKSEEKA 2185
SKKT+FLLADED+GGRKSSKAKELG FLTED LFD IRKSKPAK ++E+ KK+S EK
Sbjct: 259 SKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDKIRKSKPAKAQMQEEKKKRSPEKM 318
Query: 2184 DRSQIKSSPMKSEAKDDQPGSASRKSTMRSVQSGASPNKQKARTSEGSSLMWTEKYRPKV 2005
D+ I SP K E KDD+ S RK ++V+SG SP+K+K+++ + SSL WTEKYRPK+
Sbjct: 319 DKPIINKSPRKVEVKDDKAVSIGRKDAAKNVKSGISPDKRKSQSGDRSSLTWTEKYRPKL 378
Query: 2004 PNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKKQNDSGSKKAVLLSGTPGIGKSTTA 1825
PN+IIGNQSIVKQLHDWL W E+FLH+GQKGKGKKQ+DSGSKKAVLLSG+PGIGKST+A
Sbjct: 379 PNDIIGNQSIVKQLHDWLMTWDEHFLHAGQKGKGKKQSDSGSKKAVLLSGSPGIGKSTSA 438
Query: 1824 KLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTSNSIKELVSNEALSSSRDW-SKHPK 1648
KL+SQM+GFQAIEVNASD+RGKAD KI KGIGGSTSNSIKELVSNE ++SS D SK K
Sbjct: 439 KLVSQMIGFQAIEVNASDSRGKADAKIGKGIGGSTSNSIKELVSNEIVNSSSDCRSKRQK 498
Query: 1647 TVLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICICNDRYSQKLKSLVNYCMLLTFRKP 1468
+VLIMDEVDGMS GDRGGVADLIASIK+SKIPIICICNDRYSQKLKSLVNYC+ L +RKP
Sbjct: 499 SVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNYRKP 558
Query: 1467 TKQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDMRMAINQLQYMSLSHSVIEYNDIR 1288
TKQQMAKRL+QIA AEGLQI N++ LEELA+RVNGDMRMAINQLQYMS+S S I Y+DIR
Sbjct: 559 TKQQMAKRLKQIADAEGLQI-NEVALEELAERVNGDMRMAINQLQYMSISKSAINYDDIR 617
Query: 1287 ERLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDLSMSDPDLVPLIIQENYINYRPVC 1108
+RLLSSAKDEDISPF AVDKLFG NGGKLRMDERIDLSMSDPDLVPLI+QENYINYRP
Sbjct: 618 QRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIVQENYINYRPTS 677
Query: 1107 AGKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQWQLSQAGSFASCIIPAALMHGQRE 928
GKDENGVKR+ LAQAAESIGDGDI NVQIRRYRQWQLSQ+ SFASCIIPAALMHG RE
Sbjct: 678 IGKDENGVKRMQFLAQAAESIGDGDIFNVQIRRYRQWQLSQSSSFASCIIPAALMHGHRE 737
Query: 927 SLEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHILSSQASNLDRVTLRIDYFPLLLKK 748
+LEPGERN+NRFGGWLGKNSTMGKNLRLLED H+H L+SQ + LDR TLR+DY LLLK+
Sbjct: 738 TLEPGERNFNRFGGWLGKNSTMGKNLRLLEDVHVHFLASQEAKLDRATLRVDYLTLLLKQ 797
Query: 747 LTHPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVELSKFQTHPNPLDGIPPPVKAALTK 568
LT PL++ PK+ A Q+V+E M+ YSL+QEDFDTIVELSKF+ HPNP+D I P VK+ALTK
Sbjct: 798 LTDPLQMMPKEVAVQKVVEFMDAYSLTQEDFDTIVELSKFKGHPNPMDNIQPAVKSALTK 857
Query: 567 AYKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPADAVDNSLTEENGDAFV-XXXXXX 391
AYK GS SRVVR+AD+ITLPGLKKAPKKRIAAILEP V++ ++EENG+A
Sbjct: 858 AYKQGSSSRVVRSADLITLPGLKKAPKKRIAAILEP---VEDGVSEENGEALAENEEENS 914
Query: 390 XXXXXXXXEIKLNGEAKPKLDLQSDKSKGIQVQLDLKNDEKSN 262
+ N + KP+LDL S+K KG+QVQLDLKN+ KSN
Sbjct: 915 DSEDADDLGLGTNADQKPQLDLLSNKPKGVQVQLDLKNNGKSN 957
Score = 70.1 bits (170), Expect = 1e-08
Identities = 51/105 (48%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Frame = -1
Query: 3069 SDIRKWFMKQHDKGNGSTKTNPSKP----PENPSHSAVEKP--VQGGQE---RRKTSKYF 2917
SDIRKWFMKQHDKG+GS SKP P+ PS + +KP VQ QE RRKTSKYF
Sbjct: 3 SDIRKWFMKQHDKGSGSVSKPASKPATAVPDKPSPLSSQKPNQVQATQENSGRRKTSKYF 62
Query: 2916 XXXXXXXXXXXXXAVKGEPGTEKTLTKRKAPQKAAD--DDVKPSP 2788
VK E KT KRK + D DD+KPSP
Sbjct: 63 -TTSTAKEVNSKETVK-EKVEAKTPPKRKTRKSIEDLPDDIKPSP 105
>ref|XP_010651545.1| PREDICTED: replication factor C subunit 1 [Vitis vinifera]
gi|296083902|emb|CBI24290.3| unnamed protein product
[Vitis vinifera]
Length = 941
Score = 1131 bits (2925), Expect = 0.0
Identities = 618/950 (65%), Positives = 701/950 (73%), Gaps = 11/950 (1%)
Frame = -1
Query: 3078 SNMSDIRKWFMKQHDKGNGSTKTNPSKPPENPSHSAV--------EKPVQGGQE---RRK 2932
++ SDIRKWFMK+HD NG+ P+KP S S EKPV GGQE RRK
Sbjct: 3 ASKSDIRKWFMKKHDNDNGNP-LKPAKPEPKASQSGKPSPATVQQEKPVHGGQESSCRRK 61
Query: 2931 TSKYFXXXXXXXXXXXXXAVKGEPGTEKTLTKRKAPQKAADDDVKPSPXXXXXXXXXXXX 2752
TSKYF K E E+ KRK QK + + P P
Sbjct: 62 TSKYFQKP------------KDEKEMEELPAKRKT-QKGTKESLNPPPSKKIR------- 101
Query: 2751 XXXXXXXXKVAEARPXXXXXXXXXXXXXXXXXXXTPTKSXXXXXXXRMSGASTAPTAXXX 2572
R T+ G T
Sbjct: 102 -------------RVVDDDDDDFVLHKSDDEKVDKDTEPPIKSGGRGRGGRGALVTPAGG 148
Query: 2571 XXXXXXXXGFMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGTLDSLEREEAEDLIKR 2392
GFMNFGERKDPPHKGEKEVP GA +CLAGLTFVISGTLDSLEREEAEDLIKR
Sbjct: 149 RGRGGGRGGFMNFGERKDPPHKGEKEVPEGASDCLAGLTFVISGTLDSLEREEAEDLIKR 208
Query: 2391 HGGRVTGSISKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFDMIRKSKPAKTPVKED 2212
HGGRVTGS+SKKTNFLL DEDIGG KS+KAKELGT+FLTED LFDMI S AK P + +
Sbjct: 209 HGGRVTGSVSKKTNFLLCDEDIGGNKSAKAKELGTAFLTEDGLFDMICASNHAKAPARGE 268
Query: 2211 TKKKSEEKADRSQIKSSPMKSEAKDDQPGSASRKSTMRSVQSGASPNKQKARTSEGSSLM 2032
KK S +K + K SP K E K DQ ++S K T+ + A+ K +T +SL
Sbjct: 269 PKK-SLDKVVLATPKKSPQKVEKKVDQVVNSSGKRTVLA----ATTPKHIYQTIGHASLT 323
Query: 2031 WTEKYRPKVPNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKKQNDSGSKKAVLLSGT 1852
WTEKY+PKVPN+IIGNQS+VKQLH+WLAHW+E FLH+G KGKGKKQNDSG+KKAVLLSGT
Sbjct: 324 WTEKYKPKVPNDIIGNQSLVKQLHEWLAHWNEQFLHTGTKGKGKKQNDSGAKKAVLLSGT 383
Query: 1851 PGIGKSTTAKLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTSNSIKELVSNEALSSS 1672
PGIGK+T+AKL+SQMLGFQAIEVNASDNRGKA+ KI KGIGGS +NSIKELVSNEAL +
Sbjct: 384 PGIGKTTSAKLVSQMLGFQAIEVNASDNRGKANAKIDKGIGGSNANSIKELVSNEALGAH 443
Query: 1671 RDWSKHPKTVLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICICNDRYSQKLKSLVNYC 1492
D SKHPKTVLIMDEVDGMS GDRGGVADLIASIK+SKIPIICICNDRYSQKLKSLVNYC
Sbjct: 444 MDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYC 503
Query: 1491 MLLTFRKPTKQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDMRMAINQLQYMSLSHS 1312
+LL+FRKPTKQQMAKRL Q+A+AEGLQ+ N++ LEELA+RVNGDMRMA+NQLQYMSLS S
Sbjct: 504 LLLSFRKPTKQQMAKRLLQVANAEGLQV-NEIALEELAERVNGDMRMALNQLQYMSLSMS 562
Query: 1311 VIEYNDIRERLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDLSMSDPDLVPLIIQEN 1132
VI+Y+D+R+RLLSSAKDEDISPF AVDKLFG NGGKLRMDERIDLSMSDPDLVPL+IQEN
Sbjct: 563 VIKYDDVRQRLLSSAKDEDISPFVAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQEN 622
Query: 1131 YINYRPVCAGKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQWQLSQAGSFASCIIPA 952
YINYRP AGKD+NGVKR++LLA+AAESIGDGDIINVQIRRYRQWQLSQAGSFASCI PA
Sbjct: 623 YINYRPTLAGKDDNGVKRMSLLARAAESIGDGDIINVQIRRYRQWQLSQAGSFASCITPA 682
Query: 951 ALMHGQRESLEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHILSSQASNLDRVTLRID 772
AL+HGQRE+LE GERN+NRFGGWLGKNSTMGKN RLLED H+H+L+S+ SN R TLRID
Sbjct: 683 ALLHGQRETLEQGERNFNRFGGWLGKNSTMGKNKRLLEDLHVHLLASRESNSGRGTLRID 742
Query: 771 YFPLLLKKLTHPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVELSKFQTHPNPLDGIPP 592
Y L+LK+LT PLR+ PKD A Q+V+E M+ YS+SQEDFDTIVELSKFQ HP+PL+GI P
Sbjct: 743 YLTLILKRLTDPLRMLPKDDAVQKVVEFMDLYSISQEDFDTIVELSKFQGHPSPLEGIQP 802
Query: 591 PVKAALTKAYKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPADAVDNSLTEENGDAF 412
VK+ALTKAY GS SR+VRAAD+ITLPG+KKAPKKRIAAILEP VD+ L ENGDA
Sbjct: 803 AVKSALTKAYNKGSSSRLVRAADLITLPGIKKAPKKRIAAILEP---VDDELARENGDAL 859
Query: 411 VXXXXXXXXXXXXXXEIKLNGEAKPKLDLQSDKSKGIQVQLDLKNDEKSN 262
NG+ K +DLQ+ SKGI+V+LDLK S+
Sbjct: 860 AESEEENSSDTDDMD--TANGDKKLPVDLQNLNSKGIKVELDLKGAGSSS 907
>ref|XP_007010535.1| Replication factor C subunit 1 [Theobroma cacao]
gi|508727448|gb|EOY19345.1| Replication factor C subunit
1 [Theobroma cacao]
Length = 1012
Score = 1101 bits (2847), Expect = 0.0
Identities = 607/955 (63%), Positives = 700/955 (73%), Gaps = 18/955 (1%)
Frame = -1
Query: 3072 MSDIRKWFMKQHDKGNGSTKTNPSKPPENPSHSAVEKPVQGGQE---RRKTSKYFXXXXX 2902
MSDIRKWFMK HDKG G N SKP NP+ + + V GG+E RRKTSKYF
Sbjct: 1 MSDIRKWFMKAHDKGKG----NASKPA-NPAPTNTDS-VPGGRENSGRRKTSKYFPAGKQ 54
Query: 2901 XXXXXXXXAVKGEPGTEKTLTKRKA---------------PQKAADDDVKPSPXXXXXXX 2767
KGE GTE+ KRK P K DD P
Sbjct: 55 QP--------KGEQGTEELPAKRKVQNENESVEKPPPSKKPSKVGIDDDFVLPKSRNTVD 106
Query: 2766 XXXXXXXXXXXXXKVAEARPXXXXXXXXXXXXXXXXXXXTPTKSXXXXXXXRMSGASTAP 2587
VA+ P KS +GAS AP
Sbjct: 107 VTPSKKRKSGSGRGVAQKAEDNDESDEDDAKDLES-----PVKSGGRGGRGG-TGASVAP 160
Query: 2586 TAXXXXXXXXXXXGFMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGTLDSLEREEAE 2407
+ FMNFGERKDPPHKGEKEVP GAP+CLAGLTFVISGTLDSLEREEAE
Sbjct: 161 ASGRGRGRGRGG--FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAE 218
Query: 2406 DLIKRHGGRVTGSISKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFDMIRKSKPAKT 2227
DLIKRHGGR+T ++SKKTN+LL DEDI GRKSSKAKELG FLTED LFDMIR S K
Sbjct: 219 DLIKRHGGRITTAVSKKTNYLLCDEDIEGRKSSKAKELGIPFLTEDGLFDMIRASNCGKA 278
Query: 2226 PVKEDTKKKSEEKADRSQIKSSPMKSEAKDDQPGSASRKSTMRSVQSGASPNKQKARTSE 2047
KE++KK +E A S K SP K E K + S+S K + +S+ + S KQ+ + +
Sbjct: 279 HSKEESKKSAESFA-ASLPKKSPQKMEVKSN---SSSAKISGKSLTTSVSSTKQRGQPIQ 334
Query: 2046 GSSLMWTEKYRPKVPNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKKQNDSGSKKAV 1867
SSL WTEKYRPKVPNE+ GNQS+V QLH+WLAHW+E FL +G KGKGKKQND G+KKAV
Sbjct: 335 HSSLTWTEKYRPKVPNEMTGNQSLVNQLHNWLAHWNEQFLGTGSKGKGKKQNDPGAKKAV 394
Query: 1866 LLSGTPGIGKSTTAKLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTSNSIKELVSNE 1687
LLSGTPGIGK+T+AKL+SQMLGFQ IEVNASD+RGKAD KI KGIGGS +NSIKELVSNE
Sbjct: 395 LLSGTPGIGKTTSAKLVSQMLGFQTIEVNASDSRGKADAKISKGIGGSNANSIKELVSNE 454
Query: 1686 ALSSSRDWSKHPKTVLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICICNDRYSQKLKS 1507
ALS + D SKH KTVLIMDEVDGMS GDRGG+ADLIASIK+SKIPIICICNDRYSQKLKS
Sbjct: 455 ALSVNMDRSKHVKTVLIMDEVDGMSAGDRGGIADLIASIKISKIPIICICNDRYSQKLKS 514
Query: 1506 LVNYCMLLTFRKPTKQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDMRMAINQLQYM 1327
LVNYC+LL+FRKPTKQQMAKRL Q+A+AEGLQ+ N++ L+ELA+RVNGDMRMA+NQLQYM
Sbjct: 515 LVNYCLLLSFRKPTKQQMAKRLMQVANAEGLQV-NEIALQELAERVNGDMRMALNQLQYM 573
Query: 1326 SLSHSVIEYNDIRERLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDLSMSDPDLVPL 1147
SLS SVI+Y+DIR+RLLS +KDEDISPF AVDKLFGI GGKLRMD+RIDLSMSDPDLVPL
Sbjct: 574 SLSMSVIKYDDIRQRLLSGSKDEDISPFTAVDKLFGIYGGKLRMDQRIDLSMSDPDLVPL 633
Query: 1146 IIQENYINYRPVCAGKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQWQLSQAGSFAS 967
+IQENYINYRP GKD++G+KR+NL+AQAAESIGDGDIINVQIRRYRQWQLSQAGS +S
Sbjct: 634 LIQENYINYRPSSIGKDDSGMKRMNLIAQAAESIGDGDIINVQIRRYRQWQLSQAGSLSS 693
Query: 966 CIIPAALMHGQRESLEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHILSSQASNLDRV 787
CIIPAAL+HGQRE+LE GERN+NRFGGWLGKNSTM KN RLLED H+HIL+S+ S+ R
Sbjct: 694 CIIPAALLHGQRETLEQGERNFNRFGGWLGKNSTMSKNYRLLEDLHVHILASRESSSGRE 753
Query: 786 TLRIDYFPLLLKKLTHPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVELSKFQTHPNPL 607
TLR+DY +LL +LT+PLR KPKD A ++V+E MN YS+SQEDFDT+VELSKFQ NPL
Sbjct: 754 TLRLDYLTVLLTQLTNPLRDKPKDEAVKQVVEFMNAYSISQEDFDTVVELSKFQGQSNPL 813
Query: 606 DGIPPPVKAALTKAYKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPADAVDNSLTEE 427
+GIP VKAALTKAY +GSK+++VRAAD++TLPG+KKAPKKRIAAILEP+D V L EE
Sbjct: 814 EGIPAAVKAALTKAYNEGSKTQMVRAADLVTLPGMKKAPKKRIAAILEPSDDV---LGEE 870
Query: 426 NGDAFVXXXXXXXXXXXXXXEIKLNGEAKPKLDLQSDKSKGIQVQLDLKNDEKSN 262
NGD +GE + +LQS SKGI+VQ++LK S+
Sbjct: 871 NGDTLPESEEKSSDTEDLEG--TTDGETL-RAELQSLNSKGIEVQMELKGTGNSS 922
>ref|XP_011459476.1| PREDICTED: LOW QUALITY PROTEIN: replication factor C subunit 1
[Fragaria vesca subsp. vesca]
Length = 968
Score = 1070 bits (2766), Expect = 0.0
Identities = 588/953 (61%), Positives = 687/953 (72%), Gaps = 21/953 (2%)
Frame = -1
Query: 3075 NMSDIRKWFMKQHDKGNGSTKTNPSKPPENPSHSAVEKPVQGGQE---RRKTSKYFXXXX 2905
+ +DIRKWFMK HDKGN S S + E+ V GGQE RRKTSK+F
Sbjct: 2 SQADIRKWFMKSHDKGNASKPAPAPAALPKQSTQSQEQKVHGGQESSGRRKTSKHFPPN- 60
Query: 2904 XXXXXXXXXAVKGEPGTEKTLTKRKAPQKAADDDV---KPSPXXXXXXXXXXXXXXXXXX 2734
K +P EK + A +K V +PSP
Sbjct: 61 -----------KSKPDEEKETVQVPAKRKIQSGPVESSRPSPAKKVQKVEDDDDDDFVMP 109
Query: 2733 XXKVAEARPXXXXXXXXXXXXXXXXXXXT------------PTKSXXXXXXXRMSGASTA 2590
K EA P P KS R S +S A
Sbjct: 110 QSKKKEATPSKKLKTASGKGIPQELKSADESDDDEAKGSEAPHKSGGRGRGGRGS-SSAA 168
Query: 2589 PTAXXXXXXXXXXXGFMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGTLDSLEREEA 2410
P FMNFGERKDPPHKGEK+VP G PNCLAGLTFVISGTLDSLEREEA
Sbjct: 169 PAGGRGRGAGRGG--FMNFGERKDPPHKGEKDVPEGDPNCLAGLTFVISGTLDSLEREEA 226
Query: 2409 EDLIKRHGGRVTGSISKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFDMIRKSKPAK 2230
EDLIKRHGGR+TGS+SKKT++LL DEDI GRKSSKAKELGT+FLTED LFD IR S AK
Sbjct: 227 EDLIKRHGGRITGSVSKKTSYLLCDEDIEGRKSSKAKELGTAFLTEDGLFDKIRASIRAK 286
Query: 2229 TPVKEDTKKKSEEKADRSQIKSSPMKSEAKDDQPGSASR---KSTMRSVQSGASPNKQKA 2059
PV+E KK + + S SP K K G++S + + + S AS ++K
Sbjct: 287 APVQE-AKKLVDSAQETSLPNISPKKVALKSSADGTSSSLACRVSQKQSSSDASLARRKE 345
Query: 2058 RTSEGSSLMWTEKYRPKVPNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKKQNDSGS 1879
+T+E S+L WTEKYRPKVPN+IIGNQS+VKQLHDWLAHWHE FL +G K KG K N+SG+
Sbjct: 346 KTTEHSALTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWHEQFLDTGIKKKGNKSNNSGA 405
Query: 1878 KKAVLLSGTPGIGKSTTAKLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTSNSIKEL 1699
KKA+LLSGTPGIGK+T+AKL+SQMLGF+AIEVNASD+RGKAD+KI KG+GGS SNS+KEL
Sbjct: 406 KKALLLSGTPGIGKTTSAKLVSQMLGFEAIEVNASDSRGKADSKIVKGVGGSNSNSVKEL 465
Query: 1698 VSNEALSSSRDWSKHPKTVLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICICNDRYSQ 1519
+SN ALS R SKHPKTVLIMDEVDGMS GDRGGVADLIASIK+SKIPIICICNDRYSQ
Sbjct: 466 ISNMALSMDR--SKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQ 523
Query: 1518 KLKSLVNYCMLLTFRKPTKQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDMRMAINQ 1339
KLKSLVNYC+LL+FRKPTKQQMAKRL+Q+A+AEGLQ+ N++ LEELADRVNGDMRMA+NQ
Sbjct: 524 KLKSLVNYCLLLSFRKPTKQQMAKRLKQVANAEGLQV-NEIALEELADRVNGDMRMALNQ 582
Query: 1338 LQYMSLSHSVIEYNDIRERLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDLSMSDPD 1159
L YMSLS SVI+Y D+R+RL SS KDEDISPF AVDKLF N GKLRMDER+DLSMSDPD
Sbjct: 583 LHYMSLSMSVIKYEDVRQRLRSSEKDEDISPFTAVDKLFNFNAGKLRMDERVDLSMSDPD 642
Query: 1158 LVPLIIQENYINYRPVCAGKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQWQLSQAG 979
LVPL+IQENY+NYRP A KD +GV+R+NL+A+AAESIG+GDIINVQIR+YRQWQLSQ+G
Sbjct: 643 LVPLLIQENYVNYRPSAAAKDNSGVERMNLIARAAESIGNGDIINVQIRKYRQWQLSQSG 702
Query: 978 SFASCIIPAALMHGQRESLEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHILSSQASN 799
S +S IIPAAL+ GQRE+LE GERN+NRFGGWLGKNST GKNLRLL+D H+H+L+S+AS+
Sbjct: 703 SLSSSIIPAALLRGQRETLEQGERNFNRFGGWLGKNSTFGKNLRLLDDLHVHLLASRASS 762
Query: 798 LDRVTLRIDYFPLLLKKLTHPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVELSKFQTH 619
R TLR++Y PLLLK+L+ PLR PKD A QEV+E MN YS+SQ+D+DTIVELSKFQ H
Sbjct: 763 SGRETLRVEYLPLLLKRLSVPLRKLPKDEAVQEVVEFMNTYSISQDDYDTIVELSKFQGH 822
Query: 618 PNPLDGIPPPVKAALTKAYKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPADAVDNS 439
PNPL+GI P VKAALTKAYK+GSKSR VR A+ +T PG+KKAPKKRIAAILEP+ D +
Sbjct: 823 PNPLEGIQPAVKAALTKAYKEGSKSR-VRVAEFVTFPGMKKAPKKRIAAILEPS---DEA 878
Query: 438 LTEENGDAFVXXXXXXXXXXXXXXEIKLNGEAKPKLDLQSDKSKGIQVQLDLK 280
+ E N D V + GE K + +LQS KG+QVQLD+K
Sbjct: 879 IGENNDDTLVLSEEENSSDAEDLESSAV-GE-KLQQELQSLNRKGVQVQLDMK 929
>ref|XP_008356391.1| PREDICTED: replication factor C subunit 1-like isoform X3 [Malus
domestica]
Length = 966
Score = 1067 bits (2760), Expect = 0.0
Identities = 582/941 (61%), Positives = 681/941 (72%), Gaps = 10/941 (1%)
Frame = -1
Query: 3072 MSDIRKWFMKQHDKGNG-----STKTNPSKPPENPSHSAVEKPVQGGQERRKTSKYFXXX 2908
M+DIRKWFMK HDKGN +T PS P SA + Q RRKTSKYF
Sbjct: 1 MADIRKWFMKSHDKGNSQKPVVTTSQTPSTAKTEPKESA--RGDQDNSGRRKTSKYFPPD 58
Query: 2907 XXXXXXXXXXA-VKGEPGTEKTLTKRKAPQKAADDDVKPSPXXXXXXXXXXXXXXXXXXX 2731
K +P + + + +P K A +
Sbjct: 59 KPTDDKETSKVPAKRKPHKDPDESIKPSPAKKAHKVIDDDDDDDDFVSPNLKKKSVDSTP 118
Query: 2730 XKVAEARPXXXXXXXXXXXXXXXXXXXTPTKSXXXXXXXRMSGASTAPTAXXXXXXXXXX 2551
K ++ KS G T+
Sbjct: 119 SKKLKSTSGVGIPQKVTTIDEGGDDDAKAAKSPLKPAGRGRGGRGTSAGPTGGRGRGAGR 178
Query: 2550 XGFMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTG 2371
GFMNFGERKDPPHKGEKEVP GAP+CLAGLTFVISGTLDSLEREEAEDLIKRHGG +TG
Sbjct: 179 GGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGHITG 238
Query: 2370 SISKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFDMIRKSKPAKTPVKEDTKKKSEE 2191
S+SKKTN+LL DEDI GRKSSKAKELGT+FLTED LFDMIR S AK PV E KK ++
Sbjct: 239 SVSKKTNYLLCDEDIEGRKSSKAKELGTAFLTEDGLFDMIRASIGAKVPVHE-AKKSVDD 297
Query: 2190 KADRSQIKSSPMKSEAKDDQPGSASRKS-TMRSVQSGASPNKQKARTSEGSSLMWTEKYR 2014
A S SP K K D GS+ S + + +QS AS + K +T+ S+ WTEKYR
Sbjct: 298 AAAASLPNKSPKKVTLKKDLTGSSLASSASSKLLQSDASLARHKKQTTGHSTFTWTEKYR 357
Query: 2013 PKVPNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKKQNDSGSKKAVLLSGTPGIGKS 1834
PKVPN+IIGNQS+VKQLHDWLAHW+E FL +G K KGK +SG+K+AVLLSGTPGIGK+
Sbjct: 358 PKVPNDIIGNQSLVKQLHDWLAHWNEQFLDTGNKKKGKNPTNSGAKRAVLLSGTPGIGKT 417
Query: 1833 TTAKLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTSNSIKELVSNEALSSSRDWSKH 1654
T+AKL+SQMLGFQAIEVNASD+R K+D+KI KGIGGS +NSIKELVSN+ALS +D SKH
Sbjct: 418 TSAKLVSQMLGFQAIEVNASDSRCKSDSKIEKGIGGSNANSIKELVSNKALS--KDGSKH 475
Query: 1653 PKTVLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICICNDRYSQKLKSLVNYCMLLTFR 1474
PKTVLIMDEVDGMS GDRGGVADLIASIK+SKIPIICICNDRYSQKLKSLVNYC+LL+F
Sbjct: 476 PKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFH 535
Query: 1473 KPTKQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDMRMAINQLQYMSLSHSVIEYND 1294
KPTKQQMAKRL QIASAEGLQ+ N++ LEELA++VNGDMRMA+NQLQYMSLS SVI+Y+D
Sbjct: 536 KPTKQQMAKRLMQIASAEGLQV-NEIALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYDD 594
Query: 1293 IRERLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDLSMSDPDLVPLIIQENYINYRP 1114
+R+RLLSS+KDEDISPF AVDKLFG N GKLRMDER+DLSMSDPDLVPL+IQENYINYRP
Sbjct: 595 VRQRLLSSSKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYINYRP 654
Query: 1113 VCAGKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQWQLSQAGSFASCIIPAALMHGQ 934
A KD++G+KR++L+A AAESIG+GDI NVQIR+YRQWQLSQ+ +S IIPAAL+ GQ
Sbjct: 655 SSAVKDDSGIKRMDLIAHAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIIPAALLRGQ 714
Query: 933 RESLEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHILSSQASNLDRVTLRIDYFPLLL 754
RE+LE GERN+NRFGGWLGKNST+GKNLRLLED H+H+L+S+ S+ R TLR++Y LLL
Sbjct: 715 RETLEQGERNFNRFGGWLGKNSTLGKNLRLLEDLHVHLLASRESSSGRETLRVEYLFLLL 774
Query: 753 KKLTHPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVELSKFQTHPNPLDGIPPPVKAAL 574
K+LT PLR PKD A QEV+E MN YS+SQ+DFDTIVELSK++ HPNPLDGI P VKAAL
Sbjct: 775 KRLTVPLRELPKDEAVQEVVEFMNAYSISQDDFDTIVELSKYKGHPNPLDGILPAVKAAL 834
Query: 573 TKAYKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPADAVDNSLTEENGDAFVXXXXX 394
TKAYK+GSK+R+VRAAD +T+PG+KKAPKKRIAA+LEP+D V + E N D V
Sbjct: 835 TKAYKEGSKTRMVRAADFVTIPGMKKAPKKRIAALLEPSDVV---IGENNDDTLVQSEDE 891
Query: 393 XXXXXXXXXEIKLNGEA---KPKLDLQSDKSKGIQVQLDLK 280
L G A K + +LQS +KG+QVQ DLK
Sbjct: 892 NSSDTE-----DLEGTAAGEKLQKELQSLNTKGVQVQFDLK 927
>ref|XP_008356392.1| PREDICTED: replication factor C subunit 1-like isoform X4 [Malus
domestica]
Length = 953
Score = 1066 bits (2756), Expect = 0.0
Identities = 581/942 (61%), Positives = 681/942 (72%), Gaps = 10/942 (1%)
Frame = -1
Query: 3075 NMSDIRKWFMKQHDKGNG-----STKTNPSKPPENPSHSAVEKPVQGGQERRKTSKYFXX 2911
+ +DIRKWFMK HDKGN +T PS P SA + Q RRKTSKYF
Sbjct: 2 SQADIRKWFMKSHDKGNSQKPVVTTSQTPSTAKTEPKESA--RGDQDNSGRRKTSKYFPP 59
Query: 2910 XXXXXXXXXXXA-VKGEPGTEKTLTKRKAPQKAADDDVKPSPXXXXXXXXXXXXXXXXXX 2734
K +P + + + +P K A +
Sbjct: 60 DKPTDDKETSKVPAKRKPHKDPDESIKPSPAKKAHKVIDDDDDDDDFVSPNLKKKSVDST 119
Query: 2733 XXKVAEARPXXXXXXXXXXXXXXXXXXXTPTKSXXXXXXXRMSGASTAPTAXXXXXXXXX 2554
K ++ KS G T+
Sbjct: 120 PSKKLKSTSGVGIPQKVTTIDEGGDDDAKAAKSPLKPAGRGRGGRGTSAGPTGGRGRGAG 179
Query: 2553 XXGFMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVT 2374
GFMNFGERKDPPHKGEKEVP GAP+CLAGLTFVISGTLDSLEREEAEDLIKRHGG +T
Sbjct: 180 RGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGHIT 239
Query: 2373 GSISKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFDMIRKSKPAKTPVKEDTKKKSE 2194
GS+SKKTN+LL DEDI GRKSSKAKELGT+FLTED LFDMIR S AK PV E KK +
Sbjct: 240 GSVSKKTNYLLCDEDIEGRKSSKAKELGTAFLTEDGLFDMIRASIGAKVPVHE-AKKSVD 298
Query: 2193 EKADRSQIKSSPMKSEAKDDQPGSASRKS-TMRSVQSGASPNKQKARTSEGSSLMWTEKY 2017
+ A S SP K K D GS+ S + + +QS AS + K +T+ S+ WTEKY
Sbjct: 299 DAAAASLPNKSPKKVTLKKDLTGSSLASSASSKLLQSDASLARHKKQTTGHSTFTWTEKY 358
Query: 2016 RPKVPNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKKQNDSGSKKAVLLSGTPGIGK 1837
RPKVPN+IIGNQS+VKQLHDWLAHW+E FL +G K KGK +SG+K+AVLLSGTPGIGK
Sbjct: 359 RPKVPNDIIGNQSLVKQLHDWLAHWNEQFLDTGNKKKGKNPTNSGAKRAVLLSGTPGIGK 418
Query: 1836 STTAKLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTSNSIKELVSNEALSSSRDWSK 1657
+T+AKL+SQMLGFQAIEVNASD+R K+D+KI KGIGGS +NSIKELVSN+ALS +D SK
Sbjct: 419 TTSAKLVSQMLGFQAIEVNASDSRCKSDSKIEKGIGGSNANSIKELVSNKALS--KDGSK 476
Query: 1656 HPKTVLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICICNDRYSQKLKSLVNYCMLLTF 1477
HPKTVLIMDEVDGMS GDRGGVADLIASIK+SKIPIICICNDRYSQKLKSLVNYC+LL+F
Sbjct: 477 HPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSF 536
Query: 1476 RKPTKQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDMRMAINQLQYMSLSHSVIEYN 1297
KPTKQQMAKRL QIASAEGLQ+ N++ LEELA++VNGDMRMA+NQLQYMSLS SVI+Y+
Sbjct: 537 HKPTKQQMAKRLMQIASAEGLQV-NEIALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYD 595
Query: 1296 DIRERLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDLSMSDPDLVPLIIQENYINYR 1117
D+R+RLLSS+KDEDISPF AVDKLFG N GKLRMDER+DLSMSDPDLVPL+IQENYINYR
Sbjct: 596 DVRQRLLSSSKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYINYR 655
Query: 1116 PVCAGKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQWQLSQAGSFASCIIPAALMHG 937
P A KD++G+KR++L+A AAESIG+GDI NVQIR+YRQWQLSQ+ +S IIPAAL+ G
Sbjct: 656 PSSAVKDDSGIKRMDLIAHAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIIPAALLRG 715
Query: 936 QRESLEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHILSSQASNLDRVTLRIDYFPLL 757
QRE+LE GERN+NRFGGWLGKNST+GKNLRLLED H+H+L+S+ S+ R TLR++Y LL
Sbjct: 716 QRETLEQGERNFNRFGGWLGKNSTLGKNLRLLEDLHVHLLASRESSSGRETLRVEYLFLL 775
Query: 756 LKKLTHPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVELSKFQTHPNPLDGIPPPVKAA 577
LK+LT PLR PKD A QEV+E MN YS+SQ+DFDTIVELSK++ HPNPLDGI P VKAA
Sbjct: 776 LKRLTVPLRELPKDEAVQEVVEFMNAYSISQDDFDTIVELSKYKGHPNPLDGILPAVKAA 835
Query: 576 LTKAYKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPADAVDNSLTEENGDAFVXXXX 397
LTKAYK+GSK+R+VRAAD +T+PG+KKAPKKRIAA+LEP+D V + E N D V
Sbjct: 836 LTKAYKEGSKTRMVRAADFVTIPGMKKAPKKRIAALLEPSDVV---IGENNDDTLVQSED 892
Query: 396 XXXXXXXXXXEIKLNGEA---KPKLDLQSDKSKGIQVQLDLK 280
L G A K + +LQS +KG+QVQ DLK
Sbjct: 893 ENSSDTE-----DLEGTAAGEKLQKELQSLNTKGVQVQFDLK 929
>ref|XP_008356388.1| PREDICTED: replication factor C subunit 1-like isoform X1 [Malus
domestica] gi|658041562|ref|XP_008356389.1| PREDICTED:
replication factor C subunit 1-like isoform X1 [Malus
domestica]
Length = 968
Score = 1066 bits (2756), Expect = 0.0
Identities = 581/942 (61%), Positives = 681/942 (72%), Gaps = 10/942 (1%)
Frame = -1
Query: 3075 NMSDIRKWFMKQHDKGNG-----STKTNPSKPPENPSHSAVEKPVQGGQERRKTSKYFXX 2911
+ +DIRKWFMK HDKGN +T PS P SA + Q RRKTSKYF
Sbjct: 2 SQADIRKWFMKSHDKGNSQKPVVTTSQTPSTAKTEPKESA--RGDQDNSGRRKTSKYFPP 59
Query: 2910 XXXXXXXXXXXA-VKGEPGTEKTLTKRKAPQKAADDDVKPSPXXXXXXXXXXXXXXXXXX 2734
K +P + + + +P K A +
Sbjct: 60 DKPTDDKETSKVPAKRKPHKDPDESIKPSPAKKAHKVIDDDDDDDDFVSPNLKKKSVDST 119
Query: 2733 XXKVAEARPXXXXXXXXXXXXXXXXXXXTPTKSXXXXXXXRMSGASTAPTAXXXXXXXXX 2554
K ++ KS G T+
Sbjct: 120 PSKKLKSTSGVGIPQKVTTIDEGGDDDAKAAKSPLKPAGRGRGGRGTSAGPTGGRGRGAG 179
Query: 2553 XXGFMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVT 2374
GFMNFGERKDPPHKGEKEVP GAP+CLAGLTFVISGTLDSLEREEAEDLIKRHGG +T
Sbjct: 180 RGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGHIT 239
Query: 2373 GSISKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFDMIRKSKPAKTPVKEDTKKKSE 2194
GS+SKKTN+LL DEDI GRKSSKAKELGT+FLTED LFDMIR S AK PV E KK +
Sbjct: 240 GSVSKKTNYLLCDEDIEGRKSSKAKELGTAFLTEDGLFDMIRASIGAKVPVHE-AKKSVD 298
Query: 2193 EKADRSQIKSSPMKSEAKDDQPGSASRKS-TMRSVQSGASPNKQKARTSEGSSLMWTEKY 2017
+ A S SP K K D GS+ S + + +QS AS + K +T+ S+ WTEKY
Sbjct: 299 DAAAASLPNKSPKKVTLKKDLTGSSLASSASSKLLQSDASLARHKKQTTGHSTFTWTEKY 358
Query: 2016 RPKVPNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKKQNDSGSKKAVLLSGTPGIGK 1837
RPKVPN+IIGNQS+VKQLHDWLAHW+E FL +G K KGK +SG+K+AVLLSGTPGIGK
Sbjct: 359 RPKVPNDIIGNQSLVKQLHDWLAHWNEQFLDTGNKKKGKNPTNSGAKRAVLLSGTPGIGK 418
Query: 1836 STTAKLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTSNSIKELVSNEALSSSRDWSK 1657
+T+AKL+SQMLGFQAIEVNASD+R K+D+KI KGIGGS +NSIKELVSN+ALS +D SK
Sbjct: 419 TTSAKLVSQMLGFQAIEVNASDSRCKSDSKIEKGIGGSNANSIKELVSNKALS--KDGSK 476
Query: 1656 HPKTVLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICICNDRYSQKLKSLVNYCMLLTF 1477
HPKTVLIMDEVDGMS GDRGGVADLIASIK+SKIPIICICNDRYSQKLKSLVNYC+LL+F
Sbjct: 477 HPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSF 536
Query: 1476 RKPTKQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDMRMAINQLQYMSLSHSVIEYN 1297
KPTKQQMAKRL QIASAEGLQ+ N++ LEELA++VNGDMRMA+NQLQYMSLS SVI+Y+
Sbjct: 537 HKPTKQQMAKRLMQIASAEGLQV-NEIALEELAEKVNGDMRMAVNQLQYMSLSMSVIKYD 595
Query: 1296 DIRERLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDLSMSDPDLVPLIIQENYINYR 1117
D+R+RLLSS+KDEDISPF AVDKLFG N GKLRMDER+DLSMSDPDLVPL+IQENYINYR
Sbjct: 596 DVRQRLLSSSKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLLIQENYINYR 655
Query: 1116 PVCAGKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQWQLSQAGSFASCIIPAALMHG 937
P A KD++G+KR++L+A AAESIG+GDI NVQIR+YRQWQLSQ+ +S IIPAAL+ G
Sbjct: 656 PSSAVKDDSGIKRMDLIAHAAESIGNGDIFNVQIRKYRQWQLSQSACLSSSIIPAALLRG 715
Query: 936 QRESLEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHILSSQASNLDRVTLRIDYFPLL 757
QRE+LE GERN+NRFGGWLGKNST+GKNLRLLED H+H+L+S+ S+ R TLR++Y LL
Sbjct: 716 QRETLEQGERNFNRFGGWLGKNSTLGKNLRLLEDLHVHLLASRESSSGRETLRVEYLFLL 775
Query: 756 LKKLTHPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVELSKFQTHPNPLDGIPPPVKAA 577
LK+LT PLR PKD A QEV+E MN YS+SQ+DFDTIVELSK++ HPNPLDGI P VKAA
Sbjct: 776 LKRLTVPLRELPKDEAVQEVVEFMNAYSISQDDFDTIVELSKYKGHPNPLDGILPAVKAA 835
Query: 576 LTKAYKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPADAVDNSLTEENGDAFVXXXX 397
LTKAYK+GSK+R+VRAAD +T+PG+KKAPKKRIAA+LEP+D V + E N D V
Sbjct: 836 LTKAYKEGSKTRMVRAADFVTIPGMKKAPKKRIAALLEPSDVV---IGENNDDTLVQSED 892
Query: 396 XXXXXXXXXXEIKLNGEA---KPKLDLQSDKSKGIQVQLDLK 280
L G A K + +LQS +KG+QVQ DLK
Sbjct: 893 ENSSDTE-----DLEGTAAGEKLQKELQSLNTKGVQVQFDLK 929
>gb|EEC68391.1| hypothetical protein OsI_36544 [Oryza sativa Indica Group]
Length = 1014
Score = 1062 bits (2746), Expect = 0.0
Identities = 541/757 (71%), Positives = 621/757 (82%)
Frame = -1
Query: 2544 FMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSI 2365
FMNFGERKDPPHKGEKEVP GAP+CL GLTFVISGTLDSLEREEA DLIKR+GGRVTGSI
Sbjct: 230 FMNFGERKDPPHKGEKEVPEGAPDCLTGLTFVISGTLDSLEREEATDLIKRYGGRVTGSI 289
Query: 2364 SKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFDMIRKSKPAKTPVKEDTKKKSEEKA 2185
SKKTN+LLADED+GG KS+KAKELG FLTED LFDMIRKSKPAK V + K+ EK
Sbjct: 290 SKKTNYLLADEDVGGVKSNKAKELGVPFLTEDGLFDMIRKSKPAKATVAKHQSDKNSEKQ 349
Query: 2184 DRSQIKSSPMKSEAKDDQPGSASRKSTMRSVQSGASPNKQKARTSEGSSLMWTEKYRPKV 2005
+S +KSSP+K E +D + + + +S + AS + QK + SL WTEKYRPKV
Sbjct: 350 QKSPMKSSPVKVERRDGNQITTGKNISPKSNKGSASIDNQKVNIVDRGSLQWTEKYRPKV 409
Query: 2004 PNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKKQNDSGSKKAVLLSGTPGIGKSTTA 1825
PN+I+GNQS+VKQLHDWL W + FLHSGQKGKGKKQ DSG+KKAVLLSG PGIGK+TTA
Sbjct: 410 PNDIVGNQSMVKQLHDWLRSWEDQFLHSGQKGKGKKQADSGAKKAVLLSGPPGIGKTTTA 469
Query: 1824 KLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTSNSIKELVSNEALSSSRDWSKHPKT 1645
K++SQMLG QAIEVNASD+RGKAD+KI KG+GGSTSNSIKEL+SN L+ S + K PK
Sbjct: 470 KVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKELISNATLNYSNNRLKRPKA 529
Query: 1644 VLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICICNDRYSQKLKSLVNYCMLLTFRKPT 1465
VL+MDEVDGMS GDRGGVADLIASIK+SKIPIICICNDRYSQKLKSLVNYC+LL FRKPT
Sbjct: 530 VLVMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLLLNFRKPT 589
Query: 1464 KQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDMRMAINQLQYMSLSHSVIEYNDIRE 1285
KQQM KRL +IA EGLQ + +EELA+RV+GD+RMA+N LQYMSLS SV++Y+DIR+
Sbjct: 590 KQQMGKRLMEIAKKEGLQAQEN-AMEELAERVHGDIRMALNHLQYMSLSQSVVKYDDIRQ 648
Query: 1284 RLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDLSMSDPDLVPLIIQENYINYRPVCA 1105
RL SS KDEDISPF AVDKLFG NGG+LRMDERIDLSMSDPDLVPLIIQENYINYRP+
Sbjct: 649 RLNSSTKDEDISPFTAVDKLFGFNGGRLRMDERIDLSMSDPDLVPLIIQENYINYRPITV 708
Query: 1104 GKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQWQLSQAGSFASCIIPAALMHGQRES 925
GKD++GVKR+N LA+AAESI D DI+NVQIRRYRQWQLSQA +S I+PAALMHG RE
Sbjct: 709 GKDDSGVKRMNFLARAAESIADADIVNVQIRRYRQWQLSQAACLSSSIVPAALMHGNREI 768
Query: 924 LEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHILSSQASNLDRVTLRIDYFPLLLKKL 745
LE GERN+NRFGGWLGK ST KN+RLLEDAH HIL+SQ +NLDR +LR+DY LLL++L
Sbjct: 769 LEAGERNFNRFGGWLGKYSTTNKNIRLLEDAHSHILASQQANLDRESLRLDYLTLLLRQL 828
Query: 744 THPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVELSKFQTHPNPLDGIPPPVKAALTKA 565
T PL+ PKD A Q+V+E M+ YSLSQEDFDTIVELSKF+ HPNP+DGI P VK+ALTKA
Sbjct: 829 TDPLKTMPKDEAVQKVVEFMDTYSLSQEDFDTIVELSKFKGHPNPMDGIQPAVKSALTKA 888
Query: 564 YKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPADAVDNSLTEENGDAFVXXXXXXXX 385
YK GS SRVVRAAD++ +PG+KK KKR+AAILEP V SL EENG A
Sbjct: 889 YKQGSSSRVVRAADLVNIPGMKKPLKKRVAAILEP---VGESLPEENGVASSEGDEEDSS 945
Query: 384 XXXXXXEIKLNGEAKPKLDLQSDKSKGIQVQLDLKND 274
E+ + G+ KPKLDLQSDK KGIQVQLDLK++
Sbjct: 946 DAENNDEL-VPGDTKPKLDLQSDKKKGIQVQLDLKSN 981
>dbj|BAC76085.1| replication factor C 110 kDa subunit [Oryza sativa Japonica Group]
Length = 1021
Score = 1062 bits (2746), Expect = 0.0
Identities = 541/757 (71%), Positives = 621/757 (82%)
Frame = -1
Query: 2544 FMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSI 2365
FMNFGERKDPPHKGEKEVP GAP+CL GLTFVISGTLDSLEREEA DLIKR+GGRVTGSI
Sbjct: 237 FMNFGERKDPPHKGEKEVPEGAPDCLTGLTFVISGTLDSLEREEATDLIKRYGGRVTGSI 296
Query: 2364 SKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFDMIRKSKPAKTPVKEDTKKKSEEKA 2185
SKKTN+LLADED+GG KS+KAKELG FLTED LFDMIRKSKPAK V + K+ EK
Sbjct: 297 SKKTNYLLADEDVGGVKSNKAKELGVPFLTEDGLFDMIRKSKPAKATVAKHQSDKNSEKQ 356
Query: 2184 DRSQIKSSPMKSEAKDDQPGSASRKSTMRSVQSGASPNKQKARTSEGSSLMWTEKYRPKV 2005
+S +KSSP+K E +D + + + +S + AS + QK + SL WTEKYRPKV
Sbjct: 357 QKSPMKSSPVKVERRDGNQITTGKNISPKSNKGSASIDNQKVNIVDRGSLQWTEKYRPKV 416
Query: 2004 PNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKKQNDSGSKKAVLLSGTPGIGKSTTA 1825
PN+I+GNQS+VKQLHDWL W + FLHSGQKGKGKKQ DSG+KKAVLLSG PGIGK+TTA
Sbjct: 417 PNDIVGNQSMVKQLHDWLKSWEDQFLHSGQKGKGKKQADSGAKKAVLLSGPPGIGKTTTA 476
Query: 1824 KLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTSNSIKELVSNEALSSSRDWSKHPKT 1645
K++SQMLG QAIEVNASD+RGKAD+KI KG+GGSTSNSIKEL+SN L+ S + K PK
Sbjct: 477 KVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKELISNATLNYSNNRLKRPKA 536
Query: 1644 VLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICICNDRYSQKLKSLVNYCMLLTFRKPT 1465
VL+MDEVDGMS GDRGGVADLIASIK+SKIPIICICNDRYSQKLKSLVNYC+LL FRKPT
Sbjct: 537 VLVMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLLLNFRKPT 596
Query: 1464 KQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDMRMAINQLQYMSLSHSVIEYNDIRE 1285
KQQM KRL +IA EGLQ + +EELA+RV+GD+RMA+N LQYMSLS SV++Y+DIR+
Sbjct: 597 KQQMGKRLMEIAKKEGLQAQEN-AMEELAERVHGDIRMALNHLQYMSLSQSVVKYDDIRQ 655
Query: 1284 RLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDLSMSDPDLVPLIIQENYINYRPVCA 1105
RL SS KDEDISPF AVDKLFG NGG+LRMDERIDLSMSDPDLVPLIIQENYINYRP+
Sbjct: 656 RLNSSTKDEDISPFTAVDKLFGFNGGRLRMDERIDLSMSDPDLVPLIIQENYINYRPITV 715
Query: 1104 GKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQWQLSQAGSFASCIIPAALMHGQRES 925
GKD++GVKR+N LA+AAESI D DI+NVQIRRYRQWQLSQA +S I+PAALMHG RE
Sbjct: 716 GKDDSGVKRMNFLARAAESIADADIVNVQIRRYRQWQLSQAACLSSSIVPAALMHGNREI 775
Query: 924 LEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHILSSQASNLDRVTLRIDYFPLLLKKL 745
LE GERN+NRFGGWLGK ST KN+RLLEDAH HIL+SQ +NLDR +LR+DY LLL++L
Sbjct: 776 LEAGERNFNRFGGWLGKYSTTNKNIRLLEDAHSHILASQQANLDRESLRLDYLTLLLRQL 835
Query: 744 THPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVELSKFQTHPNPLDGIPPPVKAALTKA 565
T PL+ PKD A Q+V+E M+ YSLSQEDFDTIVELSKF+ HPNP+DGI P VK+ALTKA
Sbjct: 836 TDPLKTMPKDEAVQKVVEFMDTYSLSQEDFDTIVELSKFKGHPNPMDGIQPAVKSALTKA 895
Query: 564 YKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPADAVDNSLTEENGDAFVXXXXXXXX 385
YK GS SRVVRAAD++ +PG+KK KKR+AAILEP V SL EENG A
Sbjct: 896 YKQGSSSRVVRAADLVNIPGMKKPLKKRVAAILEP---VGESLPEENGVASSEGDEEDSS 952
Query: 384 XXXXXXEIKLNGEAKPKLDLQSDKSKGIQVQLDLKND 274
E+ + G+ KPKLDLQSDK KGIQVQLDLK++
Sbjct: 953 DAENNDEL-VPGDTKPKLDLQSDKKKGIQVQLDLKSN 988
>ref|NP_001068123.1| Os11g0572100 [Oryza sativa Japonica Group]
gi|122248776|sp|Q2R2B4.2|RFC1_ORYSJ RecName:
Full=Replication factor C subunit 1; Short=OsRFC1;
AltName: Full=Activator 1 large subunit; AltName:
Full=Activator 1 subunit 1 gi|108864532|gb|ABA94349.2|
BRCA1 C Terminus domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113645345|dbj|BAF28486.1| Os11g0572100 [Oryza sativa
Japonica Group] gi|215697840|dbj|BAG92033.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1021
Score = 1062 bits (2746), Expect = 0.0
Identities = 541/757 (71%), Positives = 621/757 (82%)
Frame = -1
Query: 2544 FMNFGERKDPPHKGEKEVPVGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSI 2365
FMNFGERKDPPHKGEKEVP GAP+CL GLTFVISGTLDSLEREEA DLIKR+GGRVTGSI
Sbjct: 237 FMNFGERKDPPHKGEKEVPEGAPDCLTGLTFVISGTLDSLEREEATDLIKRYGGRVTGSI 296
Query: 2364 SKKTNFLLADEDIGGRKSSKAKELGTSFLTEDALFDMIRKSKPAKTPVKEDTKKKSEEKA 2185
SKKTN+LLADED+GG KS+KAKELG FLTED LFDMIRKSKPAK V + K+ EK
Sbjct: 297 SKKTNYLLADEDVGGVKSNKAKELGVPFLTEDGLFDMIRKSKPAKATVAKHQSDKNSEKQ 356
Query: 2184 DRSQIKSSPMKSEAKDDQPGSASRKSTMRSVQSGASPNKQKARTSEGSSLMWTEKYRPKV 2005
+S +KSSP+K E +D + + + +S + AS + QK + SL WTEKYRPKV
Sbjct: 357 QKSPMKSSPVKVERRDGNQITTGKNISPKSNKGSASIDNQKVNIVDRGSLQWTEKYRPKV 416
Query: 2004 PNEIIGNQSIVKQLHDWLAHWHENFLHSGQKGKGKKQNDSGSKKAVLLSGTPGIGKSTTA 1825
PN+I+GNQS+VKQLHDWL W + FLHSGQKGKGKKQ DSG+KKAVLLSG PGIGK+TTA
Sbjct: 417 PNDIVGNQSMVKQLHDWLRSWEDQFLHSGQKGKGKKQADSGAKKAVLLSGPPGIGKTTTA 476
Query: 1824 KLISQMLGFQAIEVNASDNRGKADNKIFKGIGGSTSNSIKELVSNEALSSSRDWSKHPKT 1645
K++SQMLG QAIEVNASD+RGKAD+KI KG+GGSTSNSIKEL+SN L+ S + K PK
Sbjct: 477 KVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKELISNATLNYSNNRLKRPKA 536
Query: 1644 VLIMDEVDGMSGGDRGGVADLIASIKVSKIPIICICNDRYSQKLKSLVNYCMLLTFRKPT 1465
VL+MDEVDGMS GDRGGVADLIASIK+SKIPIICICNDRYSQKLKSLVNYC+LL FRKPT
Sbjct: 537 VLVMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLLLNFRKPT 596
Query: 1464 KQQMAKRLRQIASAEGLQIDNDMTLEELADRVNGDMRMAINQLQYMSLSHSVIEYNDIRE 1285
KQQM KRL +IA EGLQ + +EELA+RV+GD+RMA+N LQYMSLS SV++Y+DIR+
Sbjct: 597 KQQMGKRLMEIAKKEGLQAQEN-AMEELAERVHGDIRMALNHLQYMSLSQSVVKYDDIRQ 655
Query: 1284 RLLSSAKDEDISPFAAVDKLFGINGGKLRMDERIDLSMSDPDLVPLIIQENYINYRPVCA 1105
RL SS KDEDISPF AVDKLFG NGG+LRMDERIDLSMSDPDLVPLIIQENYINYRP+
Sbjct: 656 RLNSSTKDEDISPFTAVDKLFGFNGGRLRMDERIDLSMSDPDLVPLIIQENYINYRPITV 715
Query: 1104 GKDENGVKRLNLLAQAAESIGDGDIINVQIRRYRQWQLSQAGSFASCIIPAALMHGQRES 925
GKD++GVKR+N LA+AAESI D DI+NVQIRRYRQWQLSQA +S I+PAALMHG RE
Sbjct: 716 GKDDSGVKRMNFLARAAESIADADIVNVQIRRYRQWQLSQAACLSSSIVPAALMHGNREI 775
Query: 924 LEPGERNYNRFGGWLGKNSTMGKNLRLLEDAHIHILSSQASNLDRVTLRIDYFPLLLKKL 745
LE GERN+NRFGGWLGK ST KN+RLLEDAH HIL+SQ +NLDR +LR+DY LLL++L
Sbjct: 776 LEAGERNFNRFGGWLGKYSTTNKNIRLLEDAHSHILASQQANLDRESLRLDYLTLLLRQL 835
Query: 744 THPLRVKPKDAAAQEVLELMNDYSLSQEDFDTIVELSKFQTHPNPLDGIPPPVKAALTKA 565
T PL+ PKD A Q+V+E M+ YSLSQEDFDTIVELSKF+ HPNP+DGI P VK+ALTKA
Sbjct: 836 TDPLKTMPKDEAVQKVVEFMDTYSLSQEDFDTIVELSKFKGHPNPMDGIQPAVKSALTKA 895
Query: 564 YKDGSKSRVVRAADMITLPGLKKAPKKRIAAILEPADAVDNSLTEENGDAFVXXXXXXXX 385
YK GS SRVVRAAD++ +PG+KK KKR+AAILEP V SL EENG A
Sbjct: 896 YKQGSSSRVVRAADLVNIPGMKKPLKKRVAAILEP---VGESLPEENGVASSEGDEEDSS 952
Query: 384 XXXXXXEIKLNGEAKPKLDLQSDKSKGIQVQLDLKND 274
E+ + G+ KPKLDLQSDK KGIQVQLDLK++
Sbjct: 953 DAENNDEL-VPGDTKPKLDLQSDKKKGIQVQLDLKSN 988