BLASTX nr result
ID: Anemarrhena21_contig00007006
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00007006
(786 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009398052.1| PREDICTED: DNA-directed RNA polymerase II su... 234 5e-59
ref|XP_010940283.1| PREDICTED: DNA-directed RNA polymerase II su... 232 2e-58
ref|XP_008813022.1| PREDICTED: DNA-directed RNA polymerase II su... 228 4e-57
ref|XP_009336362.1| PREDICTED: DNA-directed RNA polymerase II su... 227 7e-57
ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II su... 227 7e-57
gb|ABQ32301.1| putative 15.9 kDa subunit of RNA polymerase II [A... 227 7e-57
ref|XP_010027764.1| PREDICTED: DNA-directed RNA polymerase II su... 226 9e-57
ref|XP_012089384.1| PREDICTED: DNA-directed RNA polymerase II su... 226 1e-56
ref|XP_012487157.1| PREDICTED: DNA-directed RNA polymerase II su... 226 1e-56
ref|XP_010261089.1| PREDICTED: DNA-directed RNA polymerase II su... 226 1e-56
ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Popu... 226 1e-56
ref|XP_007206127.1| hypothetical protein PRUPE_ppa013142mg [Prun... 226 1e-56
emb|CDP12892.1| unnamed protein product [Coffea canephora] 225 2e-56
ref|XP_008342840.1| PREDICTED: DNA-directed RNA polymerase II su... 225 3e-56
ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citr... 225 3e-56
ref|XP_006361114.1| PREDICTED: DNA-directed RNA polymerase II su... 224 4e-56
ref|XP_007048135.1| RNA polymerase II, Rpb4, core protein isofor... 224 4e-56
ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II su... 224 5e-56
ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527... 224 6e-56
ref|XP_004241362.1| PREDICTED: DNA-directed RNA polymerase II su... 224 6e-56
>ref|XP_009398052.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Musa acuminata
subsp. malaccensis]
Length = 138
Score = 234 bits (597), Expect = 5e-59
Identities = 120/138 (86%), Positives = 128/138 (92%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENAAELKIG+EFLKAKCLMN EVARILD + +QLQQ SDDPTNQISQVFEKS Q
Sbjct: 1 MSGEEEENAAELKIGEEFLKAKCLMNCEVARILDHKYDQLQQTSDDPTNQISQVFEKSMQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN DAV QVREVLSRY+L EFEL V+GNLCPETVEEAIA+VPSIKSKGR L+
Sbjct: 61 YVKRFSRYKNPDAVRQVREVLSRYKLAEFELCVLGNLCPETVEEAIAIVPSIKSKGRMLE 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
DDAIEKMLHDLSLIKKFE
Sbjct: 121 DDAIEKMLHDLSLIKKFE 138
>ref|XP_010940283.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Elaeis
guineensis]
Length = 138
Score = 232 bits (592), Expect = 2e-58
Identities = 119/138 (86%), Positives = 128/138 (92%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENAAELKIG+EFLKAKCLMN EVA ILD++ EQLQQ+SDDPTNQISQVFEKS Q
Sbjct: 1 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILDRKYEQLQQLSDDPTNQISQVFEKSMQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN DAV QVRE+LSRYRL EFEL V+GNLCPETVEEAIAMVPSIKSKGR +
Sbjct: 61 YVKRFSRYKNQDAVRQVREILSRYRLAEFELCVLGNLCPETVEEAIAMVPSIKSKGRIHE 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
DDAIEKML+DLSLIKKFE
Sbjct: 121 DDAIEKMLNDLSLIKKFE 138
>ref|XP_008813022.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 isoform X1
[Phoenix dactylifera]
Length = 138
Score = 228 bits (580), Expect = 4e-57
Identities = 116/138 (84%), Positives = 127/138 (92%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENAAELKIG+EFL+AKCLMN EVA ILD++ EQLQQ+SDDPTNQISQVFEKS Q
Sbjct: 1 MSGEEEENAAELKIGEEFLRAKCLMNCEVALILDRKYEQLQQLSDDPTNQISQVFEKSMQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN DAV QVRE+LSRY+L EFEL V+GNLCPETVEEAIAMVPSIK KGR +
Sbjct: 61 YVKRFSRYKNQDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKRKGRIHE 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
DDAIEKML+DLSLIKKFE
Sbjct: 121 DDAIEKMLNDLSLIKKFE 138
>ref|XP_009336362.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Pyrus x
bretschneideri]
Length = 138
Score = 227 bits (578), Expect = 7e-57
Identities = 116/138 (84%), Positives = 127/138 (92%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENAAELKIGDEFLKAKCLMN EV+ IL+ + EQLQQMSDDP NQISQVFEKS Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKFEQLQQMSDDPRNQISQVFEKSLQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN DAV QVRE+LSRY+LTEFEL V+GNLCPETVEEAIAMVPSIK+KGR D
Sbjct: 61 YVKRFSRYKNPDAVKQVREILSRYQLTEFELCVLGNLCPETVEEAIAMVPSIKAKGRVHD 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
DDAI+KML+DL+LIKKFE
Sbjct: 121 DDAIDKMLNDLALIKKFE 138
>ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Vitis
vinifera] gi|731409111|ref|XP_010657077.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Vitis
vinifera] gi|147856183|emb|CAN80281.1| hypothetical
protein VITISV_017448 [Vitis vinifera]
gi|302143481|emb|CBI22042.3| unnamed protein product
[Vitis vinifera]
Length = 138
Score = 227 bits (578), Expect = 7e-57
Identities = 116/138 (84%), Positives = 126/138 (91%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENAAELKIGDEFLKAKCLMN EVA IL+ + EQLQQMSDDP NQ+SQVFEKS Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVAVILEHKYEQLQQMSDDPLNQVSQVFEKSLQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN DAV QVRE+LSRY+L EFEL V+GNLCPETVEEAIAMVPSIK+KGR D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>gb|ABQ32301.1| putative 15.9 kDa subunit of RNA polymerase II [Artemisia annua]
Length = 138
Score = 227 bits (578), Expect = 7e-57
Identities = 115/138 (83%), Positives = 128/138 (92%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENAAELKIGDEFLKAKCLMN EV+ ILD +LEQLQ MSDDP+NQ+SQVFEKS Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILDHKLEQLQAMSDDPSNQVSQVFEKSLQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN DAV QVRE+LSR++L EFEL V+GNLCPETVEEAIAMVPSIKS+GRG D
Sbjct: 61 YVKRFSRYKNPDAVRQVRELLSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRGHD 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
D+AIEKML+D+SLIKKFE
Sbjct: 121 DEAIEKMLNDMSLIKKFE 138
>ref|XP_010027764.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Eucalyptus
grandis] gi|702459506|ref|XP_010027765.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Eucalyptus
grandis] gi|702459510|ref|XP_010027766.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Eucalyptus
grandis] gi|629088105|gb|KCW54358.1| hypothetical
protein EUGRSUZ_I00318 [Eucalyptus grandis]
gi|629088106|gb|KCW54359.1| hypothetical protein
EUGRSUZ_I00318 [Eucalyptus grandis]
Length = 138
Score = 226 bits (577), Expect = 9e-57
Identities = 114/138 (82%), Positives = 127/138 (92%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENAAELKIGDEFLKAKCLMN EV+ IL+ + EQLQQMSDDP NQ+SQVFEKS Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN DAV QVRE+LSRY+L EFEL V+GNLCPETVEEAIAMVPSIK++GR LD
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
D+AIEKML+DLSLIK+FE
Sbjct: 121 DEAIEKMLNDLSLIKRFE 138
>ref|XP_012089384.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Jatropha
curcas]
Length = 138
Score = 226 bits (576), Expect = 1e-56
Identities = 115/138 (83%), Positives = 126/138 (91%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENA+ELKIGDEFLKAKCLMN EVA IL+ + EQLQQMSDDP NQ+SQVFEKS Q
Sbjct: 1 MSGEEEENASELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN DAV QVRE+LSRY+L EFEL V+GNLCPETVEEAIAMVPSIK+KGR D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_012487157.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Gossypium
raimondii] gi|823248799|ref|XP_012457051.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Gossypium
raimondii] gi|763770918|gb|KJB38133.1| hypothetical
protein B456_006G238100 [Gossypium raimondii]
gi|763804330|gb|KJB71268.1| hypothetical protein
B456_011G113800 [Gossypium raimondii]
gi|763804331|gb|KJB71269.1| hypothetical protein
B456_011G113800 [Gossypium raimondii]
Length = 138
Score = 226 bits (576), Expect = 1e-56
Identities = 115/138 (83%), Positives = 126/138 (91%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENAAELKIG+EFLKAKCLMN EVA IL+ + EQLQQMSDDP NQ+SQVFEKS Q
Sbjct: 1 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN DAV QVRE+LSRY+L EFEL V+GNLCPETVEEAIAMVPSIK+KGR D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
DDAIE+ML+DLSLIKKFE
Sbjct: 121 DDAIERMLNDLSLIKKFE 138
>ref|XP_010261089.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 isoform X1
[Nelumbo nucifera]
Length = 138
Score = 226 bits (576), Expect = 1e-56
Identities = 116/138 (84%), Positives = 125/138 (90%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENAAELKIGDEFLKAKCLMN EVA ILD++ EQLQQMSDDP NQ+SQVFEKS Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN DAV QVRE+LSRY+L EFEL V+GNLCPETVEEAIAMVPSIK++GR D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRMHD 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
DD IEKML DLSLIKKFE
Sbjct: 121 DDQIEKMLTDLSLIKKFE 138
>ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Populus trichocarpa]
gi|224096326|ref|XP_002310604.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|743823365|ref|XP_011021942.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4 [Populus euphratica]
gi|743823373|ref|XP_011021944.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4 [Populus euphratica]
gi|743837931|ref|XP_011025594.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4 [Populus euphratica]
gi|222853507|gb|EEE91054.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|222856581|gb|EEE94128.1| hypothetical protein
POPTR_0005s08690g [Populus trichocarpa]
Length = 138
Score = 226 bits (576), Expect = 1e-56
Identities = 115/138 (83%), Positives = 126/138 (91%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENAAELKIGD+FLKAKCLMN EVA IL+ + EQLQQMSDDP NQ+SQVFEKS Q
Sbjct: 1 MSGEEEENAAELKIGDDFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN DAV QVRE+LSRY+L EFEL V+GNLCPETVEEAIAMVPSIK+KGR D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_007206127.1| hypothetical protein PRUPE_ppa013142mg [Prunus persica]
gi|462401769|gb|EMJ07326.1| hypothetical protein
PRUPE_ppa013142mg [Prunus persica]
Length = 138
Score = 226 bits (576), Expect = 1e-56
Identities = 115/138 (83%), Positives = 127/138 (92%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENAAELKIGDEFLKAKCLMN EVA IL+ + +QLQQMSDDP NQ+SQVFEKS Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYDQLQQMSDDPRNQVSQVFEKSLQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN DAV QVRE+LSRY+LTEFEL V+GNLCPETVEEAIAMVPSIK+KGR D
Sbjct: 61 YVKRFSRYKNPDAVKQVREILSRYQLTEFELCVLGNLCPETVEEAIAMVPSIKAKGRVHD 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
DDAI+KML+DL+LIKKFE
Sbjct: 121 DDAIDKMLNDLALIKKFE 138
>emb|CDP12892.1| unnamed protein product [Coffea canephora]
Length = 138
Score = 225 bits (574), Expect = 2e-56
Identities = 113/138 (81%), Positives = 127/138 (92%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENAAELKIGDEFLKAKCLMN EV+ IL+ + EQLQQMS+DP NQ+SQVFEKS Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPMNQMSQVFEKSLQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN D+V QVRE+LSRY+L EFEL V+GNLCPETVEEAIAMVPSIK++GR LD
Sbjct: 61 YVKRFSRYKNPDSVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
DDAIEKML+DLSL+KKFE
Sbjct: 121 DDAIEKMLNDLSLVKKFE 138
>ref|XP_008342840.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Malus
domestica]
Length = 138
Score = 225 bits (573), Expect = 3e-56
Identities = 115/138 (83%), Positives = 126/138 (91%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENAAELKIGDEFLKAKCLMN EV+ IL+ + EQLQQMSDDP NQ SQVFEKS Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKFEQLQQMSDDPRNQXSQVFEKSLQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN DAV QVRE+LSRY+LTEFEL V+GNLCPETVEEAIAMVPSIK+KGR D
Sbjct: 61 YVKRFSRYKNPDAVKQVREILSRYQLTEFELCVLGNLCPETVEEAIAMVPSIKAKGRVHD 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
DDAI+KML+DL+LIKKFE
Sbjct: 121 DDAIDKMLNDLALIKKFE 138
>ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
gi|568884040|ref|XP_006494738.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4-like isoform X2 [Citrus
sinensis] gi|557530000|gb|ESR41250.1| hypothetical
protein CICLE_v10026735mg [Citrus clementina]
Length = 138
Score = 225 bits (573), Expect = 3e-56
Identities = 115/138 (83%), Positives = 125/138 (90%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENAAELKIGDEFLKAKCLMN EVA ILD + EQLQQ SDDP NQ+SQVFEKS Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVAIILDHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN DAV QVRE+LSRY+L EFEL V+GNLCPETVEEAIAMVPSIK++GR D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_006361114.1| PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Solanum
tuberosum]
Length = 138
Score = 224 bits (572), Expect = 4e-56
Identities = 115/138 (83%), Positives = 124/138 (89%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENAAELKIGDEFLKAKCLMN EVA IL+ + EQLQQMSDDPTNQISQVFEKS Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN DAV Q RE+LSRY L EFEL V+GNLCPETVEE IAMVPSIK++GR LD
Sbjct: 61 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIKNRGRALD 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
++AIEKML DLSLIKKFE
Sbjct: 121 EEAIEKMLTDLSLIKKFE 138
>ref|XP_007048135.1| RNA polymerase II, Rpb4, core protein isoform 1 [Theobroma cacao]
gi|590707933|ref|XP_007048136.1| RNA polymerase II,
Rpb4, core protein isoform 1 [Theobroma cacao]
gi|508700396|gb|EOX92292.1| RNA polymerase II, Rpb4,
core protein isoform 1 [Theobroma cacao]
gi|508700397|gb|EOX92293.1| RNA polymerase II, Rpb4,
core protein isoform 1 [Theobroma cacao]
Length = 138
Score = 224 bits (572), Expect = 4e-56
Identities = 114/138 (82%), Positives = 126/138 (91%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENAAELKIG+EFLKAKCLMN EVA IL+ + EQLQQMS+DP NQ+SQVFEKS Q
Sbjct: 1 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQVSQVFEKSLQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN DAV QVRE+LSRY+L EFEL V+GNLCPETVEEAIAMVPSIK+KGR D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
DDAIE+ML+DLSLIKKFE
Sbjct: 121 DDAIERMLNDLSLIKKFE 138
>ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Cucumis
sativus] gi|659113879|ref|XP_008456795.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Cucumis melo]
gi|778709725|ref|XP_011656444.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4 [Cucumis sativus]
gi|700190641|gb|KGN45845.1| hypothetical protein
Csa_6G014650 [Cucumis sativus]
Length = 138
Score = 224 bits (571), Expect = 5e-56
Identities = 114/138 (82%), Positives = 127/138 (92%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENAAELKIGDEFLKAKCLMN EV+ IL+ + EQLQQMS+DPTNQ+SQVFEKS Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN DAV QVREVLSRY+L EFEL V+GNLCPETVEEAIAMVPS+K+KGR D
Sbjct: 61 YVKRFSRYKNPDAVRQVREVLSRYQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRVHD 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
D+AIEKML+DLSLIK+FE
Sbjct: 121 DEAIEKMLNDLSLIKRFE 138
>ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527704 isoform X1 [Glycine
max] gi|734406707|gb|KHN34054.1| DNA-directed RNA
polymerase II subunit RPB4 [Glycine soja]
Length = 138
Score = 224 bits (570), Expect = 6e-56
Identities = 114/138 (82%), Positives = 124/138 (89%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENAAELKIGDEFLKAKCLMN EVA IL+ + EQLQQ SDDP NQ+SQVFEKS Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN DAV QVRE+L+RY L EFEL V+GNLCPETVEEAIAMVPSIKS+GR D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYELAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQD 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_004241362.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Solanum
lycopersicum]
Length = 138
Score = 224 bits (570), Expect = 6e-56
Identities = 114/138 (82%), Positives = 124/138 (89%)
Frame = -2
Query: 638 MSGEEEENAAELKIGDEFLKAKCLMNGEVARILDKRLEQLQQMSDDPTNQISQVFEKSHQ 459
MSGEEEENAAELKIGDEFLKAKCLMN EVA IL+ + EQ+QQMSDDPTNQISQVFEKS Q
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQIQQMSDDPTNQISQVFEKSLQ 60
Query: 458 YVKRFSRFKNNDAVTQVREVLSRYRLTEFELVVIGNLCPETVEEAIAMVPSIKSKGRGLD 279
YVKRFSR+KN DAV Q RE+LSRY L EFEL V+GNLCPETVEE IAMVPSIK++GR LD
Sbjct: 61 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIKNRGRALD 120
Query: 278 DDAIEKMLHDLSLIKKFE 225
++AIEKML DLSLIKKFE
Sbjct: 121 EEAIEKMLTDLSLIKKFE 138