BLASTX nr result
ID: Anemarrhena21_contig00006895
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00006895
(1779 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012064998.1| PREDICTED: THO complex subunit 4A [Jatropha ... 229 4e-57
ref|XP_011624054.1| PREDICTED: THO complex subunit 4A isoform X2... 227 2e-56
ref|XP_002531375.1| RNA and export factor binding protein, putat... 227 2e-56
gb|KEH30114.1| RNA and export factor-binding protein [Medicago t... 226 3e-56
ref|XP_002284215.1| PREDICTED: THO complex subunit 4A [Vitis vin... 226 3e-56
ref|XP_010253243.1| PREDICTED: THO complex subunit 4A-like isofo... 226 5e-56
ref|XP_007016490.1| RNA-binding family protein [Theobroma cacao]... 226 6e-56
gb|KHG13056.1| THO complex subunit 4 [Gossypium arboreum] 224 1e-55
ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citr... 224 1e-55
ref|XP_009405838.1| PREDICTED: THO complex subunit 4A-like [Musa... 224 2e-55
ref|XP_006846043.1| PREDICTED: THO complex subunit 4A isoform X1... 223 3e-55
gb|KHG13055.1| THO complex subunit 4 [Gossypium arboreum] 223 4e-55
ref|XP_009404609.1| PREDICTED: THO complex subunit 4A-like isofo... 223 4e-55
ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isofor... 222 7e-55
ref|XP_009421344.1| PREDICTED: THO complex subunit 4A-like [Musa... 222 9e-55
ref|XP_010043580.1| PREDICTED: THO complex subunit 4A [Eucalyptu... 222 9e-55
ref|XP_010937672.1| PREDICTED: THO complex subunit 4A-like [Elae... 221 1e-54
gb|KHN32110.1| RNA and export factor-binding protein 2 [Glycine ... 221 1e-54
ref|XP_012471387.1| PREDICTED: THO complex subunit 4A [Gossypium... 221 1e-54
ref|XP_012474521.1| PREDICTED: THO complex subunit 4A-like [Goss... 221 1e-54
>ref|XP_012064998.1| PREDICTED: THO complex subunit 4A [Jatropha curcas]
gi|643738220|gb|KDP44208.1| hypothetical protein
JCGZ_05675 [Jatropha curcas]
Length = 248
Score = 229 bits (585), Expect = 4e-57
Identities = 138/257 (53%), Positives = 152/257 (59%), Gaps = 2/257 (0%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXNPYSSVPKA 1448
MSSALDMSLDDII++NKK N PYS+ KA
Sbjct: 1 MSSALDMSLDDIIKSNKKPGSGNSRGRGRASGPGPTRRFTNRVANRAA----PYSTA-KA 55
Query: 1447 PDSTWQHDMFSDQVPRLGAYPGPAGGRVSAIETGTKLYISNLDYGVSNDDIKELFGEVGD 1268
P++TWQHDMF+DQ G GGR SAIETGTKLYISNL+YGVSN+DIKELF EVGD
Sbjct: 56 PETTWQHDMFTDQ----GMGYAGQGGRASAIETGTKLYISNLEYGVSNEDIKELFSEVGD 111
Query: 1267 IKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPTPPAP 1088
+KR++IHYDRSGRSKGTAEVVFSR+ DALAAVKRYNNVQLDGKPMKIEIVGT+I TP AP
Sbjct: 112 LKRYTIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAAP 171
Query: 1087 QAPQ--LXXXXXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEPVSVA 914
A R E VS
Sbjct: 172 SAANGTFGSSNAVSRGGQGRGGAVGRQRGGSGGGRGFGRGRGRGRGGGGGGGRGEKVSAE 231
Query: 913 DLDADLDKYHSEAMQTN 863
DLDADL+KYHSEAMQTN
Sbjct: 232 DLDADLEKYHSEAMQTN 248
>ref|XP_011624054.1| PREDICTED: THO complex subunit 4A isoform X2 [Amborella trichopoda]
Length = 250
Score = 227 bits (579), Expect = 2e-56
Identities = 137/256 (53%), Positives = 151/256 (58%), Gaps = 1/256 (0%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXNPYSSVPKA 1448
MSSALDMSLDD+I+NNKKS PYS A
Sbjct: 1 MSSALDMSLDDLIKNNKKSGGGGGGGVMRGRNRGGTSGPVRRIQNRTANRAAPYSMGKAA 60
Query: 1447 PDSTWQHDMFSDQVPRLGAYPGPAGGRVSAIETGTKLYISNLDYGVSNDDIKELFGEVGD 1268
P++TWQHD+F+D V G Y G R SAIETGTKLYISNLDYGVSN+DIKELF EVGD
Sbjct: 61 PETTWQHDLFADPV---GPY-GVQAARPSAIETGTKLYISNLDYGVSNEDIKELFSEVGD 116
Query: 1267 IKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPTP-PA 1091
+KR+SIHYDRSGRSKGTAEVVFSR+ DA+AAVKRYNNVQLDGKPMKIEIVGT++ TP P
Sbjct: 117 LKRYSIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNLVTPAPI 176
Query: 1090 PQAPQLXXXXXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEPVSVAD 911
PQ A R E VS AD
Sbjct: 177 PQVANGLLATPNGIPRSVQPRGA--GIIGRGPRGGGRGGGRGRGRGGRGGGRGEKVSAAD 234
Query: 910 LDADLDKYHSEAMQTN 863
LDADL+KYHSEAMQ N
Sbjct: 235 LDADLEKYHSEAMQIN 250
>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223529035|gb|EEF31023.1| RNA and export factor binding
protein, putative [Ricinus communis]
Length = 247
Score = 227 bits (579), Expect = 2e-56
Identities = 138/257 (53%), Positives = 153/257 (59%), Gaps = 2/257 (0%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXNPYSSVPKA 1448
MSSALDMSLDDII++NKK N PY++ KA
Sbjct: 1 MSSALDMSLDDIIKSNKKPGSGNSRGRGRSSGPGPTRRFNNRGTNRAA----PYAAA-KA 55
Query: 1447 PDSTWQHDMFSDQVPRLGAYPGPAGG--RVSAIETGTKLYISNLDYGVSNDDIKELFGEV 1274
P+STWQHDMF+DQ +G + G GG R S IETGTKLYISNL+YGVSN+DIKELF EV
Sbjct: 56 PESTWQHDMFTDQ-GGMGMFQGQGGGGSRASGIETGTKLYISNLEYGVSNEDIKELFSEV 114
Query: 1273 GDIKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPTPP 1094
GD+KR+SIHYDRSGRSKGTAEVVFSR+ DALAAVKRYNNVQLDGKPMKIEIVGT+I TP
Sbjct: 115 GDLKRYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPA 174
Query: 1093 APQAPQLXXXXXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEPVSVA 914
A A R E VS
Sbjct: 175 ATPAAN----GNFGNSNGAPRGGQGRGGTMRRPRGASSDGRGFGRGRGRGRGRGEKVSAE 230
Query: 913 DLDADLDKYHSEAMQTN 863
DLDADL+KYHSEAMQTN
Sbjct: 231 DLDADLEKYHSEAMQTN 247
>gb|KEH30114.1| RNA and export factor-binding protein [Medicago truncatula]
Length = 263
Score = 226 bits (577), Expect = 3e-56
Identities = 116/179 (64%), Positives = 131/179 (73%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXNPYSSVPKA 1448
MS+ALDM+LDDII+NNKKS NP PYS+ KA
Sbjct: 1 MSAALDMTLDDIIKNNKKSGSGNPRGGRSRPGPASGPGPARRILNRAGNRAAPYSAA-KA 59
Query: 1447 PDSTWQHDMFSDQVPRLGAYPGPAGGRVSAIETGTKLYISNLDYGVSNDDIKELFGEVGD 1268
P++TWQHD+++DQ AYP GGR +IETGTKLYISNLDYGVSNDDIKELF EVGD
Sbjct: 60 PETTWQHDLYADQHVAAAAYPAAQGGRAPSIETGTKLYISNLDYGVSNDDIKELFSEVGD 119
Query: 1267 IKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPTPPA 1091
+KR +HYDRSGRSKGTAEVVFSR+QDA+AAVKRYNNVQLDGKPMKIEIVGT+I TP A
Sbjct: 120 LKRHGVHYDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGA 178
>ref|XP_002284215.1| PREDICTED: THO complex subunit 4A [Vitis vinifera]
gi|297746115|emb|CBI16171.3| unnamed protein product
[Vitis vinifera]
Length = 243
Score = 226 bits (577), Expect = 3e-56
Identities = 139/255 (54%), Positives = 154/255 (60%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXNPYSSVPKA 1448
MS+ALDMSLDD+I+NNK+S PYS V KA
Sbjct: 1 MSNALDMSLDDLIKNNKRSGGGG---NARGRGRGSGPGPARRLPNRGANRITPYS-VSKA 56
Query: 1447 PDSTWQHDMFSDQVPRLGAYPGPAGGRVSAIETGTKLYISNLDYGVSNDDIKELFGEVGD 1268
P++TWQHDMF+DQ AYP AG R SAIETGTKLYISNLDYGVSN+DIKELF EVGD
Sbjct: 57 PETTWQHDMFADQA---AAYPAQAG-RTSAIETGTKLYISNLDYGVSNEDIKELFSEVGD 112
Query: 1267 IKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPTPPAP 1088
+KR+SIHYDRSGRSKGTAEVVFSR+ DA+AAVKRYNNVQLDGKPMKIEIVGT+I TP A
Sbjct: 113 LKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAA- 171
Query: 1087 QAPQLXXXXXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEPVSVADL 908
P + A R E VS DL
Sbjct: 172 -VPPV--TNGTFGNSNGGLRSAQGRVGSQGRPRGGSGGRGFGRGRGRGRGRGEKVSAEDL 228
Query: 907 DADLDKYHSEAMQTN 863
DADL+KYHSEAMQ N
Sbjct: 229 DADLEKYHSEAMQIN 243
>ref|XP_010253243.1| PREDICTED: THO complex subunit 4A-like isoform X1 [Nelumbo nucifera]
Length = 241
Score = 226 bits (576), Expect = 5e-56
Identities = 139/258 (53%), Positives = 153/258 (59%), Gaps = 3/258 (1%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXNPYS--SVP 1454
MSS+LDMSLDD+I+NNKKS SN PYS
Sbjct: 1 MSSSLDMSLDDLIKNNKKSGGSN----FRGRGRGSGPGPARRAPNRGANRTTPYSMGKSV 56
Query: 1453 KAPDSTWQHDMFSDQVPRLGAYPGPAGGRVSAIETGTKLYISNLDYGVSNDDIKELFGEV 1274
+APDS WQHDMF+DQ AYP A R SAIETGTKLYISNLDYGVSNDDIKELF EV
Sbjct: 57 QAPDSAWQHDMFTDQA---AAYPAQAS-RASAIETGTKLYISNLDYGVSNDDIKELFSEV 112
Query: 1273 GDIKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPTPP 1094
GD+KR++IHYDRSGRSKGTAEVVFSR+ DALAAVKRYNNVQLDGKPMKIEIVGT++ TP
Sbjct: 113 GDLKRYTIHYDRSGRSKGTAEVVFSRRADALAAVKRYNNVQLDGKPMKIEIVGTNVTTPA 172
Query: 1093 -APQAPQLXXXXXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEPVSV 917
AP A RAE ++
Sbjct: 173 VAPAATN---------GKFGNPNSVPRSGQGRGGAIGRPRGRGFGRGRGRGRGRAEQITA 223
Query: 916 ADLDADLDKYHSEAMQTN 863
DLDADL+KYHSEAMQ N
Sbjct: 224 EDLDADLEKYHSEAMQIN 241
>ref|XP_007016490.1| RNA-binding family protein [Theobroma cacao]
gi|508786853|gb|EOY34109.1| RNA-binding family protein
[Theobroma cacao]
Length = 241
Score = 226 bits (575), Expect = 6e-56
Identities = 135/255 (52%), Positives = 154/255 (60%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXNPYSSVPKA 1448
MSSAL+MSLDD+I+ N+KS N PY++ KA
Sbjct: 1 MSSALEMSLDDLIKRNRKSGSGNSRGRGRGSGPGPARRFPNRGANRSG----PYTAA-KA 55
Query: 1447 PDSTWQHDMFSDQVPRLGAYPGPAGGRVSAIETGTKLYISNLDYGVSNDDIKELFGEVGD 1268
P++TWQHDM+SD+ A+ G AG R SAIETGTKLYISNLDYGVSNDDIKELF EVGD
Sbjct: 56 PETTWQHDMYSDKG---AAFQGQAG-RASAIETGTKLYISNLDYGVSNDDIKELFAEVGD 111
Query: 1267 IKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPTPPAP 1088
+KRF+IHYDRSGRSKGTAEVVFSR+ DA+AAVKRYNNVQLDGKPMKIEIVGT++ TP AP
Sbjct: 112 LKRFTIHYDRSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPMKIEIVGTNVATPGAP 171
Query: 1087 QAPQLXXXXXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEPVSVADL 908
A R E VS DL
Sbjct: 172 SA-----GNGAFGNSNGAPRGGHGRGGGFGKQRGGGGGRGFGRGRGRGKGRGEKVSAEDL 226
Query: 907 DADLDKYHSEAMQTN 863
DA+L+KYHSEAMQTN
Sbjct: 227 DAELEKYHSEAMQTN 241
>gb|KHG13056.1| THO complex subunit 4 [Gossypium arboreum]
Length = 237
Score = 224 bits (572), Expect = 1e-55
Identities = 134/255 (52%), Positives = 152/255 (59%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXNPYSSVPKA 1448
MSSAL+MSLDD+I+ ++KS N PY++ KA
Sbjct: 1 MSSALEMSLDDLIKRSRKSGSGNSRGRGRGSTAGPARRIPNRRANRSA----PYTAA-KA 55
Query: 1447 PDSTWQHDMFSDQVPRLGAYPGPAGGRVSAIETGTKLYISNLDYGVSNDDIKELFGEVGD 1268
P++TWQHDM+SD+ GA GR SAIETGTKLYISNLDYGVSNDDIKELF EVGD
Sbjct: 56 PETTWQHDMYSDK----GAALQGQAGRASAIETGTKLYISNLDYGVSNDDIKELFSEVGD 111
Query: 1267 IKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPTPPAP 1088
+KR+ IHYDRSGRSKGTAEVVFSR+ DA+AAVKRYNNVQLDGKP+KIEIVGT+I TP AP
Sbjct: 112 LKRYGIHYDRSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPIKIEIVGTNIATPTAP 171
Query: 1087 QAPQLXXXXXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEPVSVADL 908
A A R E VS DL
Sbjct: 172 SAAN---------GTFGSSNGAPRGGGGFGRQRGGAGGRGFGRGRGQGKGRGEKVSAEDL 222
Query: 907 DADLDKYHSEAMQTN 863
DADL+KYHSEAMQTN
Sbjct: 223 DADLEKYHSEAMQTN 237
>ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citrus clementina]
gi|567864256|ref|XP_006424777.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864258|ref|XP_006424778.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864260|ref|XP_006424779.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526710|gb|ESR38016.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526711|gb|ESR38017.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526712|gb|ESR38018.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526713|gb|ESR38019.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
Length = 247
Score = 224 bits (572), Expect = 1e-55
Identities = 136/258 (52%), Positives = 153/258 (59%), Gaps = 3/258 (1%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXNPYSSVPKA 1448
MSSALDMSLDDII+NNKKS N PY++ KA
Sbjct: 1 MSSALDMSLDDIIKNNKKSGSGN----FRGRGRGSGPGPARRIPNRGANRVAPYTTA-KA 55
Query: 1447 PDSTWQHDMFSDQVPRLGAYPGPAGGRVSAIETGTKLYISNLDYGVSNDDIKELFGEVGD 1268
P++TWQHDMF+DQV A+P GR SAIETGTKLYISNLDYGVSN+DIKELF EVGD
Sbjct: 56 PETTWQHDMFADQV---SAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGD 112
Query: 1267 IKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPTPPAP 1088
+KR+SIHYDRSGRSKGTAEVV+SR+ DA+AAVKRYNNVQLDGKPMKIEIVGT+I T A
Sbjct: 113 LKRYSIHYDRSGRSKGTAEVVYSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNIATRTAA 172
Query: 1087 QAPQLXXXXXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEPVSVADL 908
A + E +S DL
Sbjct: 173 PAANVNFGNSNGVPRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGRERN---EKISAEDL 229
Query: 907 DADLDKYH---SEAMQTN 863
DADLDKY+ SEAMQTN
Sbjct: 230 DADLDKYYSEASEAMQTN 247
>ref|XP_009405838.1| PREDICTED: THO complex subunit 4A-like [Musa acuminata subsp.
malaccensis]
Length = 235
Score = 224 bits (571), Expect = 2e-55
Identities = 138/256 (53%), Positives = 154/256 (60%), Gaps = 1/256 (0%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXNPYSSVPKA 1448
MSSALDMSLDDII+NNKKST PYS V KA
Sbjct: 1 MSSALDMSLDDIIKNNKKSTPGG-----RGRGRGSGAGPARRVPNRSANRSAPYS-VAKA 54
Query: 1447 PDSTWQHDMFSDQVPRLGAYPGPAGGRVSAIETGTKLYISNLDYGVSNDDIKELFGEVGD 1268
PDS WQHD ++ Q GA P PAG R S+IETGTKLYISNL+YGVSN+DIKELF EVGD
Sbjct: 55 PDSAWQHDKYAAQT---GALPAPAG-RASSIETGTKLYISNLEYGVSNEDIKELFSEVGD 110
Query: 1267 IKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPTPPA- 1091
+KR+SI+YDRSGRSKGTAEVVFSR+ DALAAVKRYNNV LDGKPMKIE++GT+I TP A
Sbjct: 111 LKRYSINYDRSGRSKGTAEVVFSRRADALAAVKRYNNVLLDGKPMKIEVIGTNISTPAAI 170
Query: 1090 PQAPQLXXXXXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEPVSVAD 911
PQ+ + R EPVS
Sbjct: 171 PQS-----------VFGNFNGSSKSTGPGRGSTGPQGGGRGRGRGRGRGKGRGEPVSADA 219
Query: 910 LDADLDKYHSEAMQTN 863
LDADLDKYH+EAMQTN
Sbjct: 220 LDADLDKYHAEAMQTN 235
>ref|XP_006846043.1| PREDICTED: THO complex subunit 4A isoform X1 [Amborella trichopoda]
gi|769809515|ref|XP_011624053.1| PREDICTED: THO complex
subunit 4A isoform X1 [Amborella trichopoda]
gi|548848813|gb|ERN07718.1| hypothetical protein
AMTR_s00012p00035940 [Amborella trichopoda]
Length = 253
Score = 223 bits (569), Expect = 3e-55
Identities = 137/259 (52%), Positives = 152/259 (58%), Gaps = 4/259 (1%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXNPYS---SV 1457
MSSALDMSLDD+I+NNKKS PYS +
Sbjct: 1 MSSALDMSLDDLIKNNKKSGGGGGGGVMRGRNRGGTSGPVRRIQNRTANRAAPYSMGKAF 60
Query: 1456 PKAPDSTWQHDMFSDQVPRLGAYPGPAGGRVSAIETGTKLYISNLDYGVSNDDIKELFGE 1277
AP++TWQHD+F+D V G Y G R SAIETGTKLYISNLDYGVSN+DIKELF E
Sbjct: 61 QAAPETTWQHDLFADPV---GPY-GVQAARPSAIETGTKLYISNLDYGVSNEDIKELFSE 116
Query: 1276 VGDIKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPTP 1097
VGD+KR+SIHYDRSGRSKGTAEVVFSR+ DA+AAVKRYNNVQLDGKPMKIEIVGT++ TP
Sbjct: 117 VGDLKRYSIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNLVTP 176
Query: 1096 -PAPQAPQLXXXXXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEPVS 920
P PQ A R E VS
Sbjct: 177 APIPQVANGLLATPNGIPRSVQPRGA--GIIGRGPRGGGRGGGRGRGRGGRGGGRGEKVS 234
Query: 919 VADLDADLDKYHSEAMQTN 863
ADLDADL+KYHSEAMQ N
Sbjct: 235 AADLDADLEKYHSEAMQIN 253
>gb|KHG13055.1| THO complex subunit 4 [Gossypium arboreum]
Length = 241
Score = 223 bits (568), Expect = 4e-55
Identities = 133/255 (52%), Positives = 151/255 (59%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXNPYSSVPKA 1448
MSSAL+MSLDD+I+ ++KS N PY++ KA
Sbjct: 1 MSSALEMSLDDLIKRSRKSGSGNSRGRGRGSTAGPARRIPNRRANRSA----PYTAA-KA 55
Query: 1447 PDSTWQHDMFSDQVPRLGAYPGPAGGRVSAIETGTKLYISNLDYGVSNDDIKELFGEVGD 1268
P++TWQHDM+SD+ GA GR SAIETGTKLYISNLDYGVSNDDIKELF EVGD
Sbjct: 56 PETTWQHDMYSDK----GAALQGQAGRASAIETGTKLYISNLDYGVSNDDIKELFSEVGD 111
Query: 1267 IKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPTPPAP 1088
+KR+ IHYDRSGRSKGTAEVVFSR+ DA+AAVKRYNNVQLDGKP+KIEIVGT+I TP AP
Sbjct: 112 LKRYGIHYDRSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPIKIEIVGTNIATPTAP 171
Query: 1087 QAPQLXXXXXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEPVSVADL 908
A R E VS DL
Sbjct: 172 SAAN-----GTFGSSNGAPRGGQGRGGGFGRQRGGAGGRGFGRGRGQGKGRGEKVSAEDL 226
Query: 907 DADLDKYHSEAMQTN 863
DADL+KYHSEAMQTN
Sbjct: 227 DADLEKYHSEAMQTN 241
>ref|XP_009404609.1| PREDICTED: THO complex subunit 4A-like isoform X1 [Musa acuminata
subsp. malaccensis]
Length = 240
Score = 223 bits (568), Expect = 4e-55
Identities = 132/255 (51%), Positives = 152/255 (59%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXNPYSSVPKA 1448
MSSALDMSLDDII+NNKKS D + PYS V KA
Sbjct: 1 MSSALDMSLDDIIKNNKKSADGS-----RGRGRRSAAGPARRVSNRSANRPAPYS-VGKA 54
Query: 1447 PDSTWQHDMFSDQVPRLGAYPGPAGGRVSAIETGTKLYISNLDYGVSNDDIKELFGEVGD 1268
PDS WQHDM++ Q +G P PA G SAIETG+KLYISNL+YGVSN+DIKELF +VGD
Sbjct: 55 PDSAWQHDMYAAQ---MGGLPAPAAG-ASAIETGSKLYISNLEYGVSNEDIKELFSKVGD 110
Query: 1267 IKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPTPPAP 1088
+KR+SI+YDRSGRSKGTAEVVF+R+ DALAAVKRYNNV LDGKPMKIEI+GT+IPTP
Sbjct: 111 LKRYSINYDRSGRSKGTAEVVFARRVDALAAVKRYNNVLLDGKPMKIEIIGTNIPTPAV- 169
Query: 1087 QAPQLXXXXXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEPVSVADL 908
+ + EP+S A L
Sbjct: 170 ----VPHFTNGAFRSTNGSSKSTRPGRGSSGWPRGGGRGSSGGRERGKGRGGEPISAATL 225
Query: 907 DADLDKYHSEAMQTN 863
D DLDKYH+EAMQTN
Sbjct: 226 DVDLDKYHAEAMQTN 240
>ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isoform X1 [Citrus sinensis]
Length = 247
Score = 222 bits (566), Expect = 7e-55
Identities = 135/258 (52%), Positives = 152/258 (58%), Gaps = 3/258 (1%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXNPYSSVPKA 1448
MSSALDMSLDDII+NNKKS N PY++ KA
Sbjct: 1 MSSALDMSLDDIIKNNKKSGSGN----FRGRGRGSGPGPARRIPNRGANRVAPYTTA-KA 55
Query: 1447 PDSTWQHDMFSDQVPRLGAYPGPAGGRVSAIETGTKLYISNLDYGVSNDDIKELFGEVGD 1268
P++TWQHDMF+DQV A+P GR SAIETGTKLYISNLDYGVSN+DIKELF EVGD
Sbjct: 56 PETTWQHDMFADQV---SAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGD 112
Query: 1267 IKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPTPPAP 1088
+KR+SIHYDRSGRSKGTAEVV+SR+ DA+AAVKRYN VQLDGKPMKIEIVGT+I T A
Sbjct: 113 LKRYSIHYDRSGRSKGTAEVVYSRRADAVAAVKRYNTVQLDGKPMKIEIVGTNIATRTAA 172
Query: 1087 QAPQLXXXXXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEPVSVADL 908
A + E +S DL
Sbjct: 173 PAANVNFGNSNGVPRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGRERN---EKISAEDL 229
Query: 907 DADLDKYH---SEAMQTN 863
DADLDKY+ SEAMQTN
Sbjct: 230 DADLDKYYSEASEAMQTN 247
>ref|XP_009421344.1| PREDICTED: THO complex subunit 4A-like [Musa acuminata subsp.
malaccensis]
Length = 239
Score = 222 bits (565), Expect = 9e-55
Identities = 137/255 (53%), Positives = 153/255 (60%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXNPYSSVPKA 1448
MSSALDMSLDDII+NNK+S PYS V KA
Sbjct: 1 MSSALDMSLDDIIKNNKQSAPGG-----RGRGRGSGAGPARRVPNRSANRSAPYS-VGKA 54
Query: 1447 PDSTWQHDMFSDQVPRLGAYPGPAGGRVSAIETGTKLYISNLDYGVSNDDIKELFGEVGD 1268
PDS WQHDMF+ Q +G P PA R S+IETGTKLYISNL+YGVSN+DIKELF EVGD
Sbjct: 55 PDSAWQHDMFAAQ---MGGVPAPAA-RASSIETGTKLYISNLEYGVSNEDIKELFSEVGD 110
Query: 1267 IKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPTPPAP 1088
+KR+SI+YDRSGRSKGTAEVVF+R+ DALAAVKRYNNV LDGKPMKIEI+GT+I TP A
Sbjct: 111 LKRYSINYDRSGRSKGTAEVVFARRADALAAVKRYNNVLLDGKPMKIEIIGTNISTPAA- 169
Query: 1087 QAPQLXXXXXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEPVSVADL 908
PQL R EPVS A L
Sbjct: 170 -VPQL----SNGAFGNSNGASKSTGPGRGSAGWPRGGGRGRGRDRGRGRGRGEPVSAAAL 224
Query: 907 DADLDKYHSEAMQTN 863
DA+LDKYH+EAMQTN
Sbjct: 225 DAELDKYHAEAMQTN 239
>ref|XP_010043580.1| PREDICTED: THO complex subunit 4A [Eucalyptus grandis]
gi|629121108|gb|KCW85598.1| hypothetical protein
EUGRSUZ_B02389 [Eucalyptus grandis]
gi|629121109|gb|KCW85599.1| hypothetical protein
EUGRSUZ_B02389 [Eucalyptus grandis]
gi|629121110|gb|KCW85600.1| hypothetical protein
EUGRSUZ_B02389 [Eucalyptus grandis]
Length = 252
Score = 222 bits (565), Expect = 9e-55
Identities = 137/259 (52%), Positives = 154/259 (59%), Gaps = 5/259 (1%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNP----XXXXXXXXXXXXXXXXXXXXXXXXXXXNPYSS 1460
MSSALDMSLDDII++NKKS P NPY++
Sbjct: 1 MSSALDMSLDDIIKSNKKSGSGAPRSGGGRGRGGGGAASGPGPTRRPPNRAAARANPYAA 60
Query: 1459 VPKAPDSTWQHDMFSDQVPRLGAYPGPAGGRVSAIETGTKLYISNLDYGVSNDDIKELFG 1280
PKAP++TWQHDMF+DQ P GR SAIETGTKLYISNLDYGVSN+DIKELF
Sbjct: 61 -PKAPETTWQHDMFADQGLTFQGQP----GRASAIETGTKLYISNLDYGVSNEDIKELFS 115
Query: 1279 EVGDIKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPT 1100
EVGD+KR ++HYDRSGRSKGTAEVVFSR+ DALAAVKRYNNVQLDGKPMKIEIVGT+I T
Sbjct: 116 EVGDLKRHAVHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIAT 175
Query: 1099 PPAPQAPQLXXXXXXXXXXXXXXXPA-XXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEPV 923
P A P + A R+E V
Sbjct: 176 PAA--TPVISNGSFGNLNGFPRGGQARGGAIGRPRGGASGSGRRPAARGRGRGRGRSEKV 233
Query: 922 SVADLDADLDKYHSEAMQT 866
S DLDADL+KYHSEAM+T
Sbjct: 234 SAEDLDADLEKYHSEAMET 252
>ref|XP_010937672.1| PREDICTED: THO complex subunit 4A-like [Elaeis guineensis]
Length = 243
Score = 221 bits (564), Expect = 1e-54
Identities = 131/255 (51%), Positives = 148/255 (58%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXNPYSSVPKA 1448
MSSALDMSLD+II+ NK S+ N PYS V KA
Sbjct: 1 MSSALDMSLDEIIKKNKMSSAGNFRGRGRGSGLRPGPGPARRFPSRSGNRSAPYS-VGKA 59
Query: 1447 PDSTWQHDMFSDQVPRLGAYPGPAGGRVSAIETGTKLYISNLDYGVSNDDIKELFGEVGD 1268
PDS WQHDM+S Q +G YP P + S IETGTKLYISNLDYGVSN+DIKELF EVGD
Sbjct: 60 PDSAWQHDMYSGQ---MGGYPAPVA-KASGIETGTKLYISNLDYGVSNEDIKELFSEVGD 115
Query: 1267 IKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPTPPAP 1088
+KR++IHYDRSGRSKGTAEV FSR+ DALAAVKRYNNVQLDGKPM+IEIVGT+IP P A
Sbjct: 116 LKRYAIHYDRSGRSKGTAEVFFSRRGDALAAVKRYNNVQLDGKPMEIEIVGTNIPKPAA- 174
Query: 1087 QAPQLXXXXXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEPVSVADL 908
+ E +S +DL
Sbjct: 175 ------VSQISSGSYRKLNGVSKSAPVRGSIGRPRGGGRARGRGRGRGKGSNESISASDL 228
Query: 907 DADLDKYHSEAMQTN 863
DADL+KYHSEAMQ N
Sbjct: 229 DADLEKYHSEAMQVN 243
>gb|KHN32110.1| RNA and export factor-binding protein 2 [Glycine soja]
Length = 247
Score = 221 bits (564), Expect = 1e-54
Identities = 129/255 (50%), Positives = 151/255 (59%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXNPYSSVPKA 1448
MS+A+DMSLDDII+NNKKS + PY++ KA
Sbjct: 1 MSAAMDMSLDDIIKNNKKSGSGSSRGRTRPSGSGPTRRLPNRAANRAA----PYATA-KA 55
Query: 1447 PDSTWQHDMFSDQVPRLGAYPGPAGGRVSAIETGTKLYISNLDYGVSNDDIKELFGEVGD 1268
P++TWQHD+++DQ YP GGR ++IETGTKLYISNLDYGVSNDDIKELF EVGD
Sbjct: 56 PEATWQHDLYADQHVAAAGYPAQ-GGRAASIETGTKLYISNLDYGVSNDDIKELFAEVGD 114
Query: 1267 IKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPTPPAP 1088
+KR ++HYDRSGRSKGTAEVVFSR+ DA++AVKRYNNVQLDGKPMKIEIVGT+I TP
Sbjct: 115 LKRHAVHYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVGTNISTPGVA 174
Query: 1087 QAPQLXXXXXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEPVSVADL 908
AP R E VS DL
Sbjct: 175 PAPN--GAIGNFNGVPRSGQGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDL 232
Query: 907 DADLDKYHSEAMQTN 863
DADL+KYH+EAMQ N
Sbjct: 233 DADLEKYHAEAMQLN 247
>ref|XP_012471387.1| PREDICTED: THO complex subunit 4A [Gossypium raimondii]
gi|763752760|gb|KJB20148.1| hypothetical protein
B456_003G135200 [Gossypium raimondii]
gi|763752761|gb|KJB20149.1| hypothetical protein
B456_003G135200 [Gossypium raimondii]
gi|763752762|gb|KJB20150.1| hypothetical protein
B456_003G135200 [Gossypium raimondii]
Length = 241
Score = 221 bits (563), Expect = 1e-54
Identities = 131/255 (51%), Positives = 153/255 (60%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXNPYSSVPKA 1448
MSSAL+MSLDD+I+ N+KS NP PY++ A
Sbjct: 1 MSSALEMSLDDLIKRNRKSGSGNPRGRGRGSGPGPARRFPNRGANRSA----PYTAAT-A 55
Query: 1447 PDSTWQHDMFSDQVPRLGAYPGPAGGRVSAIETGTKLYISNLDYGVSNDDIKELFGEVGD 1268
P++TWQHDM+SD+ A+ G AG R +AIETGTKLY+SNLDYGVSNDDIKELF EVGD
Sbjct: 56 PETTWQHDMYSDKG---AAFQGQAG-RAAAIETGTKLYVSNLDYGVSNDDIKELFSEVGD 111
Query: 1267 IKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPTPPAP 1088
+KR++IHYD +GRSKGTAEVVFSRK DA+AAVKRYNNVQLDGKPMKIEIVGT+I TP AP
Sbjct: 112 LKRYAIHYDWTGRSKGTAEVVFSRKADAMAAVKRYNNVQLDGKPMKIEIVGTNIATPAAP 171
Query: 1087 QAPQLXXXXXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEPVSVADL 908
+ R E VS DL
Sbjct: 172 TVANV-----AFGSSNGAPRGGRGRGGGFRRQRGVAGGRGFGRGRGQGRGRGEKVSAEDL 226
Query: 907 DADLDKYHSEAMQTN 863
DADL+KYH+EAMQTN
Sbjct: 227 DADLEKYHTEAMQTN 241
>ref|XP_012474521.1| PREDICTED: THO complex subunit 4A-like [Gossypium raimondii]
gi|763741358|gb|KJB08857.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
gi|763741359|gb|KJB08858.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
gi|763741360|gb|KJB08859.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
gi|763741362|gb|KJB08861.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
gi|763741363|gb|KJB08862.1| hypothetical protein
B456_001G108500 [Gossypium raimondii]
Length = 241
Score = 221 bits (563), Expect = 1e-54
Identities = 134/255 (52%), Positives = 151/255 (59%)
Frame = -3
Query: 1627 MSSALDMSLDDIIRNNKKSTDSNPXXXXXXXXXXXXXXXXXXXXXXXXXXXNPYSSVPKA 1448
MSSAL+MSLDD+I+ ++KS N PY++ KA
Sbjct: 1 MSSALEMSLDDLIKRSRKSGSGNSRGRGRGSTAGPARRIPNRRANRSA----PYTAA-KA 55
Query: 1447 PDSTWQHDMFSDQVPRLGAYPGPAGGRVSAIETGTKLYISNLDYGVSNDDIKELFGEVGD 1268
P++ WQHDM+SD+ A G AG R SAIETGTKLYISNLDYGVSNDDIKELF EVGD
Sbjct: 56 PETMWQHDMYSDKG---SALQGQAG-RASAIETGTKLYISNLDYGVSNDDIKELFSEVGD 111
Query: 1267 IKRFSIHYDRSGRSKGTAEVVFSRKQDALAAVKRYNNVQLDGKPMKIEIVGTDIPTPPAP 1088
+KR+ IHYDRSGRSKGTAEVVFSR+ DA+AAVKRYNNVQLDGKPMKIEIVGT+I TP AP
Sbjct: 112 LKRYGIHYDRSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPMKIEIVGTNIATPTAP 171
Query: 1087 QAPQLXXXXXXXXXXXXXXXPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEPVSVADL 908
A R E VS DL
Sbjct: 172 SAAN-----GTFGSSNGAPRGGQGRGGGFGRQRGGAGGRGFGRGRGQGKGRGEKVSAEDL 226
Query: 907 DADLDKYHSEAMQTN 863
DADL+KYHSEAMQTN
Sbjct: 227 DADLEKYHSEAMQTN 241