BLASTX nr result
ID: Anemarrhena21_contig00006835
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00006835
(938 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009409986.1| PREDICTED: mediator of RNA polymerase II tra... 202 3e-49
ref|XP_008811533.1| PREDICTED: mediator of RNA polymerase II tra... 197 7e-48
ref|XP_010941332.1| PREDICTED: mediator of RNA polymerase II tra... 191 8e-46
ref|XP_002322847.1| hydroxyproline-rich glycoprotein [Populus tr... 185 4e-44
ref|XP_011048424.1| PREDICTED: mediator of RNA polymerase II tra... 184 6e-44
ref|XP_011048421.1| PREDICTED: mediator of RNA polymerase II tra... 184 6e-44
ref|XP_009122747.1| PREDICTED: mediator of RNA polymerase II tra... 174 1e-40
ref|XP_010490754.1| PREDICTED: mediator of RNA polymerase II tra... 172 3e-40
ref|XP_002273310.1| PREDICTED: mediator of RNA polymerase II tra... 172 3e-40
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera] 172 3e-40
ref|XP_004236703.1| PREDICTED: mediator of RNA polymerase II tra... 171 7e-40
ref|XP_012085966.1| PREDICTED: mediator of RNA polymerase II tra... 170 1e-39
ref|XP_006338527.1| PREDICTED: mediator of RNA polymerase II tra... 170 1e-39
gb|AAP40461.1| unknown protein [Arabidopsis thaliana] 170 1e-39
ref|NP_195905.1| hydroxyproline-rich glycoprotein family protein... 170 1e-39
ref|XP_010452148.1| PREDICTED: mediator of RNA polymerase II tra... 169 3e-39
ref|XP_010267723.1| PREDICTED: mediator of RNA polymerase II tra... 169 3e-39
ref|XP_009598014.1| PREDICTED: mediator of RNA polymerase II tra... 169 3e-39
gb|KFK24735.1| hypothetical protein AALP_AA8G017700 [Arabis alpina] 169 3e-39
ref|XP_002870993.1| hypothetical protein ARALYDRAFT_487063 [Arab... 169 3e-39
>ref|XP_009409986.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Musa acuminata subsp. malaccensis]
Length = 419
Score = 202 bits (514), Expect = 3e-49
Identities = 133/314 (42%), Positives = 168/314 (53%), Gaps = 28/314 (8%)
Frame = -3
Query: 930 SLWSTSYSASLPPFLP------GXXXXXXXXXXXSTKEILSLFHSLQTQLFESVAELQEI 769
S+W TSY + P F STK+++SLF +LQTQLFE+VAELQEI
Sbjct: 93 SVWLTSYRGNPPNFSKELNSSAAAATATAAPVPASTKDLMSLFTTLQTQLFEAVAELQEI 152
Query: 768 LDLQDTTNKLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYRSRD----------- 622
LDLQD K+AREI++KDSALLSF KI+E+E +LDHL+DDY++YR RD
Sbjct: 153 LDLQDARVKVAREIRAKDSALLSFTKKIREAEQVLDHLIDDYSNYR-RDPKRPRIEQDGE 211
Query: 621 -----LLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRASQLYH 457
LH +LDL E+L+YAH+ISYTTFAPPEH PQDNEMRASQLYH
Sbjct: 212 SNYSMSLHSSLDLEEILSYAHRISYTTFAPPEHGAGLAPLRGALPPAPQDNEMRASQLYH 271
Query: 456 FADLDVGVPRXXXXXXXXXXXXXXXXXEINDVLMEPTPPREEMXXXXXXXXXXXXXXXXX 277
FADLDVG+P+ + ++L++PTPPRE++
Sbjct: 272 FADLDVGLPK----KAAPEAKERAAADAVTEILLQPTPPREDV---PVAMLPPLLPIAVP 324
Query: 276 XGWRKGM--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNREGLPRIPAV----QKPP 115
GWRKGM G+ + +P +P V K P
Sbjct: 325 PGWRKGMPVELPSELPPVPPGWKPGDPVTLPLDGVMVGNKGDEQQMPGVPGVLVGQPKAP 384
Query: 114 EAIQVKHVELDINP 73
EAIQVK+V+LDINP
Sbjct: 385 EAIQVKYVQLDINP 398
>ref|XP_008811533.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Phoenix dactylifera] gi|672113565|ref|XP_008811544.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 4 [Phoenix dactylifera]
gi|672113570|ref|XP_008811562.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 4 [Phoenix
dactylifera] gi|672113576|ref|XP_008811584.1| PREDICTED:
mediator of RNA polymerase II transcription subunit 4
[Phoenix dactylifera] gi|672113578|ref|XP_008811592.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 4 [Phoenix dactylifera]
gi|672113580|ref|XP_008811602.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 4 [Phoenix
dactylifera]
Length = 437
Score = 197 bits (502), Expect = 7e-48
Identities = 134/319 (42%), Positives = 160/319 (50%), Gaps = 35/319 (10%)
Frame = -3
Query: 924 WSTSYSASLPPFLPGXXXXXXXXXXXST----------KEILSLFHSLQTQLFESVAELQ 775
W S+ SLP FLP + KE+++LF +LQTQ+FESVAELQ
Sbjct: 106 WLASFRGSLPSFLPSASASATPLSSSCSSSTSAAPSSAKEVVALFTALQTQIFESVAELQ 165
Query: 774 EILDLQDTTNKLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYRSRDLLHP----- 610
EILDLQD+ K+A EI++KDS LLSF KI+E+E +LD LVDDY+DYR RD P
Sbjct: 166 EILDLQDSCLKIAGEIRAKDSTLLSFTKKIREAEQVLDQLVDDYSDYR-RDPKRPKSDKD 224
Query: 609 ------------NLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRASQ 466
+LDL E+L+YAH+ISYTTFAPPEH PQ+NEMRASQ
Sbjct: 225 SFDSGYSTSLRSSLDLQEILSYAHRISYTTFAPPEHGAGLAPLRGALPPAPQENEMRASQ 284
Query: 465 LYHFADLDVGVPRXXXXXXXXXXXXXXXXXEINDVLMEPTPPREEMXXXXXXXXXXXXXX 286
LYHFADLDVGVP+ LMEPTPPREE+
Sbjct: 285 LYHFADLDVGVPKKAPEAKERVADALAEVP-----LMEPTPPREEV---PVPIPPPMLPI 336
Query: 285 XXXXGWRKGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNRE----GLPRIPAVQKP 118
GWRKGM E G+P IP + P
Sbjct: 337 TVPPGWRKGMPVELPSELPPPPPGWKPGDPITLPLDGVVVGNREEQRVGGVPGIPGMPAP 396
Query: 117 ----PEAIQVKHVELDINP 73
PEAIQVK+V+LDINP
Sbjct: 397 PPKAPEAIQVKYVQLDINP 415
>ref|XP_010941332.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Elaeis guineensis]
Length = 440
Score = 191 bits (484), Expect = 8e-46
Identities = 135/320 (42%), Positives = 160/320 (50%), Gaps = 36/320 (11%)
Frame = -3
Query: 924 WSTSYSASLPPFLPGXXXXXXXXXXXST-----------KEILSLFHSLQTQLFESVAEL 778
W S+ SLP FLP S+ KE+++LF +LQTQ+FE+VAEL
Sbjct: 110 WLASFRGSLPSFLPSASASASAAPIPSSSSSSSAAPSSAKEVVALFTALQTQIFEAVAEL 169
Query: 777 QEILDLQDTTNKLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYRSRDLLHP---- 610
QEILDLQD+ KLAREI++KDS LLSF KI+E+E +LD LVDDY+DYR RD P
Sbjct: 170 QEILDLQDSRLKLAREIRAKDSTLLSFTKKIREAEQVLDQLVDDYSDYR-RDPKRPKSDQ 228
Query: 609 -------------NLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRAS 469
+LDL E+L+YAH+ISYTTFAPPEH PQ+NEMRAS
Sbjct: 229 DSSDSGCSTSLRSSLDLQEILSYAHRISYTTFAPPEH-AGLAPLRGALPPAPQENEMRAS 287
Query: 468 QLYHFADLDVGVPRXXXXXXXXXXXXXXXXXEINDVLMEPTPPREEMXXXXXXXXXXXXX 289
QLYHFADLDVGV + LMEPTPPREE
Sbjct: 288 QLYHFADLDVGVLK-----KAPEAKERAADALAEPPLMEPTPPREE----APVPIPPMLP 338
Query: 288 XXXXXGWRKGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNRE----GLPRIPAVQK 121
GWRKGM E G+P +P V
Sbjct: 339 ITVPAGWRKGMPIELPNELPLPPLGWKPGDPINLPLDGVVVGNREEQRVGGVPGMPGVPA 398
Query: 120 P----PEAIQVKHVELDINP 73
P PEAIQVK+V+LDINP
Sbjct: 399 PPPKAPEAIQVKYVQLDINP 418
>ref|XP_002322847.1| hydroxyproline-rich glycoprotein [Populus trichocarpa]
gi|222867477|gb|EEF04608.1| hydroxyproline-rich
glycoprotein [Populus trichocarpa]
Length = 397
Score = 185 bits (469), Expect = 4e-44
Identities = 121/298 (40%), Positives = 154/298 (51%), Gaps = 16/298 (5%)
Frame = -3
Query: 924 WSTSYSASLPPFLPGXXXXXXXXXXXSTKEILSLFHSLQTQLFESVAELQEILDLQDTTN 745
W ++Y +LP FLP STKEI+SLF SLQTQLFESVAELQEILDLQD+
Sbjct: 93 WLSAYRGTLPTFLPSQSQSLDEPTPTSTKEIISLFTSLQTQLFESVAELQEILDLQDSKQ 152
Query: 744 KLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYRSRDLLHPN-------------- 607
++++EIKSKDSALL+FANK+KE+E +LD LVDDYADYR R + PN
Sbjct: 153 RISQEIKSKDSALLNFANKLKEAERVLDILVDDYADYRRRRPIPPNEEEENATNTTTVAS 212
Query: 606 -LDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRASQLYHFADLDVGVP 430
L L+++L+YAH+ISYTTFAPPE PQ+ +MRASQLY+FA LDVG+P
Sbjct: 213 QLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFAHLDVGLP 272
Query: 429 RXXXXXXXXXXXXXXXXXEINDVLMEPTPPREEMXXXXXXXXXXXXXXXXXXGWRKGMXX 250
+ + ++E P+ E GW+ GM
Sbjct: 273 KDVETKEKTI-----------EAIIE---PQHEANPLENLAGLFPPNISVPAGWKPGMPV 318
Query: 249 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNREGLPRIP-AVQKPPEAIQVKHVELDI 79
++ P P + KPPE IQV+HVELDI
Sbjct: 319 VLPTDLPVPPPGWKPGDPVSLDSIPLPRAVEQKLPPIAPQGLHKPPETIQVRHVELDI 376
>ref|XP_011048424.1| PREDICTED: mediator of RNA polymerase II transcription subunit
4-like [Populus euphratica]
gi|743909866|ref|XP_011048425.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 4-like [Populus
euphratica]
Length = 398
Score = 184 bits (468), Expect = 6e-44
Identities = 121/298 (40%), Positives = 154/298 (51%), Gaps = 16/298 (5%)
Frame = -3
Query: 924 WSTSYSASLPPFLPGXXXXXXXXXXXSTKEILSLFHSLQTQLFESVAELQEILDLQDTTN 745
W ++Y +LP FLP STKEI+SLF SLQTQLFESVAELQEILDLQD+
Sbjct: 94 WLSAYRGTLPTFLPSQSQSLDEPTPSSTKEIISLFTSLQTQLFESVAELQEILDLQDSKQ 153
Query: 744 KLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYRSRDLLHPN-------------- 607
++++EIKSKDSALL+FANK+KE+E +LD LVDDYADYR R + PN
Sbjct: 154 RVSQEIKSKDSALLNFANKLKEAERVLDILVDDYADYRRRRPIPPNEDEENATNTTTVAS 213
Query: 606 -LDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRASQLYHFADLDVGVP 430
L L+++L+YAH+ISYTTFAPPE PQ+ +MRASQLY+FA LDVG+P
Sbjct: 214 QLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFAHLDVGLP 273
Query: 429 RXXXXXXXXXXXXXXXXXEINDVLMEPTPPREEMXXXXXXXXXXXXXXXXXXGWRKGMXX 250
+ + ++E P+ E GW+ GM
Sbjct: 274 KDVETKEKTI-----------EAIIE---PQHEANPLENLAGLFPPNISVPAGWKPGMPV 319
Query: 249 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNREGLPRIP-AVQKPPEAIQVKHVELDI 79
++ P P + KPPE IQV+HVELDI
Sbjct: 320 VLPTDLPVPPPGWKPGDPVSLDSIPLPRAVEQKLPPIAPQGLHKPPETIQVRHVELDI 377
>ref|XP_011048421.1| PREDICTED: mediator of RNA polymerase II transcription subunit
4-like [Populus euphratica]
gi|743909859|ref|XP_011048422.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 4-like [Populus
euphratica]
Length = 398
Score = 184 bits (468), Expect = 6e-44
Identities = 121/298 (40%), Positives = 154/298 (51%), Gaps = 16/298 (5%)
Frame = -3
Query: 924 WSTSYSASLPPFLPGXXXXXXXXXXXSTKEILSLFHSLQTQLFESVAELQEILDLQDTTN 745
W ++Y +LP FLP STKEI+SLF SLQTQLFESVAELQEILDLQD+
Sbjct: 94 WLSAYRGTLPTFLPSQSQSLDEPTPSSTKEIISLFTSLQTQLFESVAELQEILDLQDSKQ 153
Query: 744 KLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYRSRDLLHPN-------------- 607
++++EIKSKDSALL+FANK+KE+E +LD LVDDYADYR R + PN
Sbjct: 154 RVSQEIKSKDSALLNFANKLKEAERVLDILVDDYADYRRRRPIPPNEDEENATNTTTVAS 213
Query: 606 -LDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRASQLYHFADLDVGVP 430
L L+++L+YAH+ISYTTFAPPE PQ+ +MRASQLY+FA LDVG+P
Sbjct: 214 QLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFAHLDVGLP 273
Query: 429 RXXXXXXXXXXXXXXXXXEINDVLMEPTPPREEMXXXXXXXXXXXXXXXXXXGWRKGMXX 250
+ + ++E P+ E GW+ GM
Sbjct: 274 KDVETKEKTI-----------EAIIE---PQHEANPLENLAGLFPPNISVPAGWKPGMPV 319
Query: 249 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNREGLPRIP-AVQKPPEAIQVKHVELDI 79
++ P P + KPPE IQV+HVELDI
Sbjct: 320 VLPTDLPVPPPGWKPGDPVSLDSIPLPRAVEQKLPPIAPQGLHKPPETIQVRHVELDI 377
>ref|XP_009122747.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Brassica rapa]
Length = 420
Score = 174 bits (440), Expect = 1e-40
Identities = 121/308 (39%), Positives = 146/308 (47%), Gaps = 24/308 (7%)
Frame = -3
Query: 930 SLWSTSYSASLPPFLPGXXXXXXXXXXXS----TKEILSLFHSLQTQLFESVAELQEILD 763
+LW +++ SLP FL TKEILS F+SLQ QLFE+V ELQEILD
Sbjct: 107 ALWLSAFRGSLPSFLTSHSLPPPPPLEIPNPSSTKEILSQFNSLQMQLFEAVTELQEILD 166
Query: 762 LQDTTNKLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYRS--------------- 628
LQD KLAREIKSKDS+LL+FANK+KE+E +LD LVDDYADYR
Sbjct: 167 LQDAKQKLAREIKSKDSSLLAFANKLKEAERVLDMLVDDYADYRKPKRTKTEDEENDNES 226
Query: 627 ----RDLLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRASQLY 460
+ L L ++LAYAHKISYTTFAPPE PQD +MRASQLY
Sbjct: 227 SPSVTTTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLY 286
Query: 459 HFADLDVGVPRXXXXXXXXXXXXXXXXXEINDVLMEPTPPREEMXXXXXXXXXXXXXXXX 280
FADLD+G+P+ + LMEP PP E M
Sbjct: 287 AFADLDIGLPKTVENIEKKV-----------EALMEPPPPPESM-NLSAIQGLLPPNIAV 334
Query: 279 XXGWRKGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNREGLPRIP-AVQKPPEAIQ 103
GW+ GM R R P + +PP+ I
Sbjct: 335 PSGWKPGMPVELPKDWRLPAPPPGWKPGDPVVLPPELVPAPRAQEQRPPQGLHRPPDVIH 394
Query: 102 VKHVELDI 79
V+ V+LDI
Sbjct: 395 VREVQLDI 402
>ref|XP_010490754.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Camelina sativa]
Length = 424
Score = 172 bits (436), Expect = 3e-40
Identities = 104/220 (47%), Positives = 126/220 (57%), Gaps = 20/220 (9%)
Frame = -3
Query: 927 LWSTSYSASLPPFLPGXXXXXXXXXXXS----TKEILSLFHSLQTQLFESVAELQEILDL 760
LW +++ SLP FL TKEILS F+SLQTQLFE+V ELQEILDL
Sbjct: 111 LWLSAFRGSLPSFLSSHSLPPPPPLENPNPSSTKEILSQFNSLQTQLFEAVTELQEILDL 170
Query: 759 QDTTNKLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYR----------------S 628
QD K+AREIKSKDS+LL+FANK+K++E +LD LVDDY+DYR +
Sbjct: 171 QDAKQKVAREIKSKDSSLLAFANKLKDAERVLDMLVDDYSDYRKPKRSKTLTDDEEEEDA 230
Query: 627 RDLLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRASQLYHFAD 448
+ L L ++LAYAHKISYTTFAPPE PQD +MRASQLY FAD
Sbjct: 231 STTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYTFAD 290
Query: 447 LDVGVPRXXXXXXXXXXXXXXXXXEINDVLMEPTPPREEM 328
LD+G+P+ D L+EP PP E M
Sbjct: 291 LDIGLPKTVENLEKKV-----------DTLIEPPPPPEAM 319
>ref|XP_002273310.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Vitis vinifera] gi|731398985|ref|XP_010653455.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 4 [Vitis vinifera]
Length = 414
Score = 172 bits (436), Expect = 3e-40
Identities = 123/314 (39%), Positives = 155/314 (49%), Gaps = 29/314 (9%)
Frame = -3
Query: 930 SLWSTSYSASLPPFLPGXXXXXXXXXXXS----TKEILSLFHSLQTQLFESVAELQEILD 763
SLW TS+ +LP FL TKEILSLF SLQTQLFE+VAELQEILD
Sbjct: 91 SLWLTSFRGTLPTFLSSQSIPPTPTPLEHSPSSTKEILSLFTSLQTQLFEAVAELQEILD 150
Query: 762 LQDTTNKLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYR----------SRD--- 622
LQD K+ REI+SKDSA+L+FANK+KE+E +LD LVDDY+DYR S D
Sbjct: 151 LQDAKQKITREIRSKDSAILAFANKLKEAEAVLDILVDDYSDYRRPKRSNTADDSEDSSS 210
Query: 621 ---LLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRASQLYHFA 451
+ L+L+++L+YAH+ISYTTFAPPE PQ+ +MRASQLY+F+
Sbjct: 211 CTTTVASQLNLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFS 270
Query: 450 DLDVGVPRXXXXXXXXXXXXXXXXXEINDVLMEPTPPR----EEMXXXXXXXXXXXXXXX 283
DLDVG+P+ + +EP P + +
Sbjct: 271 DLDVGLPKAVGIKEKTI-----------ETFIEPPPAQPADSNPLANLPSIQGLLPPNIT 319
Query: 282 XXXGWRKGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNR--EGLPRIPA---VQKP 118
GW+ GM +R E LPR A +QK
Sbjct: 320 VPSGWKPGMPVELPSLPIVPPPGWKPGDPVPLPPLESIPIPSRAEEQLPRPLAAHGLQKA 379
Query: 117 PEAIQVKHVELDIN 76
PE I V HV+LDIN
Sbjct: 380 PEPIHVPHVQLDIN 393
>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
Length = 1448
Score = 172 bits (436), Expect = 3e-40
Identities = 123/314 (39%), Positives = 155/314 (49%), Gaps = 29/314 (9%)
Frame = -3
Query: 930 SLWSTSYSASLPPFLPGXXXXXXXXXXXS----TKEILSLFHSLQTQLFESVAELQEILD 763
SLW TS+ +LP FL TKEILSLF SLQTQLFE+VAELQEILD
Sbjct: 1125 SLWLTSFRGTLPTFLSSQSIPPTPTPLEHSPSSTKEILSLFTSLQTQLFEAVAELQEILD 1184
Query: 762 LQDTTNKLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYR----------SRD--- 622
LQD K+ REI+SKDSA+L+FANK+KE+E +LD LVDDY+DYR S D
Sbjct: 1185 LQDAKQKITREIRSKDSAILAFANKLKEAEAVLDILVDDYSDYRRPKRSNTADDSEDSSS 1244
Query: 621 ---LLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRASQLYHFA 451
+ L+L+++L+YAH+ISYTTFAPPE PQ+ +MRASQLY+F+
Sbjct: 1245 CTTTVASQLNLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFS 1304
Query: 450 DLDVGVPRXXXXXXXXXXXXXXXXXEINDVLMEPTPPR----EEMXXXXXXXXXXXXXXX 283
DLDVG+P+ + +EP P + +
Sbjct: 1305 DLDVGLPKAVGIKEKTI-----------ETFIEPPPAQPADSNPLANLPSIQGLLPPNIT 1353
Query: 282 XXXGWRKGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNR--EGLPRIPA---VQKP 118
GW+ GM +R E LPR A +QK
Sbjct: 1354 VPSGWKPGMPVELPSLPIVPPPGWKPGDPVPLPPLESIPIPSRAEEQLPRPLAAHGLQKA 1413
Query: 117 PEAIQVKHVELDIN 76
PE I V HV+LDIN
Sbjct: 1414 PEPIHVPHVQLDIN 1427
>ref|XP_004236703.1| PREDICTED: mediator of RNA polymerase II transcription subunit
4-like [Solanum lycopersicum]
Length = 401
Score = 171 bits (433), Expect = 7e-40
Identities = 95/182 (52%), Positives = 120/182 (65%), Gaps = 14/182 (7%)
Frame = -3
Query: 930 SLWSTSYSASLPPFLPGXXXXXXXXXXXSTKEILSLFHSLQTQLFESVAELQEILDLQDT 751
S W +++ SLP FLP S+KEILS+F SLQTQLFE+VAELQEILDLQD
Sbjct: 93 SHWLSAFRGSLPSFLPSVAPVPQDSCPSSSKEILSVFTSLQTQLFEAVAELQEILDLQDE 152
Query: 750 TNKLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYR--------------SRDLLH 613
KL RE++SKDS++L+FANK+KE+E +LD LVDDY+DYR S +
Sbjct: 153 KQKLTREVRSKDSSILAFANKLKEAERVLDMLVDDYSDYRRPKQAKLENDTEESSVTTVA 212
Query: 612 PNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRASQLYHFADLDVGV 433
L L+++L+YAH+ISYTTFAPPE PQD ++RASQLY FADLDVG+
Sbjct: 213 TQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQLRASQLYIFADLDVGL 272
Query: 432 PR 427
P+
Sbjct: 273 PK 274
>ref|XP_012085966.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Jatropha curcas] gi|643713346|gb|KDP26214.1|
hypothetical protein JCGZ_22460 [Jatropha curcas]
Length = 417
Score = 170 bits (431), Expect = 1e-39
Identities = 98/191 (51%), Positives = 122/191 (63%), Gaps = 23/191 (12%)
Frame = -3
Query: 930 SLWSTSYSASLPPFLPGXXXXXXXXXXXST----KEILSLFHSLQTQLFESVAELQEILD 763
+ W +++ SLP FL ST KE+LSLF SLQTQLFE+VAELQEILD
Sbjct: 94 AFWLSAFRGSLPTFLSSQTQSMAPPPLESTPTSTKEVLSLFTSLQTQLFEAVAELQEILD 153
Query: 762 LQDTTNKLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYR---------------- 631
LQD +LAREIKSKDSALL+FANK+KE+E +LD LVDDY+DYR
Sbjct: 154 LQDAKQRLAREIKSKDSALLNFANKLKEAERVLDMLVDDYSDYRRPKRAKSKLSADVPED 213
Query: 630 ---SRDLLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRASQLY 460
S + L+L+++L+YAH+ISYTTFAPPE+ PQ+ +MRASQLY
Sbjct: 214 DDVSNTTVASQLELSDILSYAHRISYTTFAPPEYGAGQVPLRGALPPAPQEEQMRASQLY 273
Query: 459 HFADLDVGVPR 427
FADLDVG+P+
Sbjct: 274 AFADLDVGLPK 284
>ref|XP_006338527.1| PREDICTED: mediator of RNA polymerase II transcription subunit
4-like [Solanum tuberosum]
Length = 398
Score = 170 bits (431), Expect = 1e-39
Identities = 115/303 (37%), Positives = 148/303 (48%), Gaps = 18/303 (5%)
Frame = -3
Query: 930 SLWSTSYSASLPPFLPGXXXXXXXXXXXSTKEILSLFHSLQTQLFESVAELQEILDLQDT 751
S W +++ S P FLP S+KEILS+F SLQTQLFE+VAELQEILDLQD
Sbjct: 90 SHWLSAFRGSFPSFLPSTSPIPQDSSPSSSKEILSVFTSLQTQLFEAVAELQEILDLQDE 149
Query: 750 TNKLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYR--------------SRDLLH 613
K+ REI+S DSA+L+FANK+K +E +LD+LVDDYADYR S +
Sbjct: 150 KQKVTREIRSNDSAILAFANKLKGAERVLDNLVDDYADYRRPKRAKLENDTEESSVTSVA 209
Query: 612 PNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRASQLYHFADLDVGV 433
L L+++L+YAH+ISYTTFAPPE PQD ++RASQLY FADLDVG+
Sbjct: 210 TQLKLSDILSYAHRISYTTFAPPEFGGGQAPLRGALPPAPQDEQLRASQLYIFADLDVGL 269
Query: 432 PRXXXXXXXXXXXXXXXXXEINDVLMEPTPPREEMXXXXXXXXXXXXXXXXXXGWRKGMX 253
P+ I + L+EP + GW+ GM
Sbjct: 270 PK-----------TDEGKENILEPLIEPPAESNALANLSSIQGLVPPNIVVPSGWKPGMP 318
Query: 252 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNREGLPR----IPAVQKPPEAIQVKHVEL 85
E P P + + PE IQV+HV+L
Sbjct: 319 VELPTDLPLPPPGWKPGDPIALPPVDSRPPQKVEEAPARPVPPPGLSRMPEPIQVRHVQL 378
Query: 84 DIN 76
DI+
Sbjct: 379 DID 381
>gb|AAP40461.1| unknown protein [Arabidopsis thaliana]
Length = 426
Score = 170 bits (430), Expect = 1e-39
Identities = 103/225 (45%), Positives = 127/225 (56%), Gaps = 24/225 (10%)
Frame = -3
Query: 930 SLWSTSYSASLPPFLPGXXXXXXXXXXXS----TKEILSLFHSLQTQLFESVAELQEILD 763
++W +++ SLP FL TKEILS F+SLQTQLFE+V ELQEILD
Sbjct: 108 AIWLSAFRGSLPSFLSSHSLPPPPPLENPSPSSTKEILSQFNSLQTQLFEAVTELQEILD 167
Query: 762 LQDTTNKLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYR---------------- 631
LQD K+AREIKSKDS+LL+FANK+K++E +LD LVDDY+DYR
Sbjct: 168 LQDAKQKVAREIKSKDSSLLAFANKLKDAERVLDMLVDDYSDYRKPKRSKIEEDDEDNDN 227
Query: 630 ----SRDLLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRASQL 463
S + L L ++LAYAHKISYTTFAPPE PQD +MRASQL
Sbjct: 228 ESSSSSTTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQL 287
Query: 462 YHFADLDVGVPRXXXXXXXXXXXXXXXXXEINDVLMEPTPPREEM 328
Y FADLD+G+P+ + L+EP PP E M
Sbjct: 288 YTFADLDIGLPKTVENMEKKV-----------EALIEPPPPPEAM 321
>ref|NP_195905.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
thaliana] gi|75181168|sp|Q9LZ00.1|MED4_ARATH RecName:
Full=Mediator of RNA polymerase II transcription subunit
4 gi|7413560|emb|CAB86039.1| putative protein
[Arabidopsis thaliana] gi|332003144|gb|AED90527.1|
hydroxyproline-rich glycoprotein family protein
[Arabidopsis thaliana]
Length = 426
Score = 170 bits (430), Expect = 1e-39
Identities = 103/225 (45%), Positives = 127/225 (56%), Gaps = 24/225 (10%)
Frame = -3
Query: 930 SLWSTSYSASLPPFLPGXXXXXXXXXXXS----TKEILSLFHSLQTQLFESVAELQEILD 763
++W +++ SLP FL TKEILS F+SLQTQLFE+V ELQEILD
Sbjct: 108 AIWLSAFRGSLPSFLSSHSLPPPPPLENPSPSSTKEILSQFNSLQTQLFEAVTELQEILD 167
Query: 762 LQDTTNKLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYR---------------- 631
LQD K+AREIKSKDS+LL+FANK+K++E +LD LVDDY+DYR
Sbjct: 168 LQDAKQKVAREIKSKDSSLLAFANKLKDAERVLDMLVDDYSDYRKPKRSKIEEDDEDNDN 227
Query: 630 ----SRDLLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRASQL 463
S + L L ++LAYAHKISYTTFAPPE PQD +MRASQL
Sbjct: 228 ESSSSSTTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQL 287
Query: 462 YHFADLDVGVPRXXXXXXXXXXXXXXXXXEINDVLMEPTPPREEM 328
Y FADLD+G+P+ + L+EP PP E M
Sbjct: 288 YTFADLDIGLPKTVENMEKKV-----------EALIEPPPPPEAM 321
>ref|XP_010452148.1| PREDICTED: mediator of RNA polymerase II transcription subunit
4-like [Camelina sativa]
Length = 432
Score = 169 bits (428), Expect = 3e-39
Identities = 104/229 (45%), Positives = 127/229 (55%), Gaps = 28/229 (12%)
Frame = -3
Query: 930 SLWSTSYSASLPPFLPGXXXXXXXXXXXS----TKEILSLFHSLQTQLFESVAELQEILD 763
+LW +++ SLP FL TKEILS F+SLQTQLFE+V ELQEILD
Sbjct: 110 ALWLSAFRGSLPSFLSSHSLPPPPPLENPNPSSTKEILSQFNSLQTQLFEAVTELQEILD 169
Query: 762 LQDTTNKLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYR---------------- 631
LQD K+AREIKSKDS+LL+FANK+K++E +LD LVDDY+DYR
Sbjct: 170 LQDAKQKVAREIKSKDSSLLAFANKLKDAERVLDMLVDDYSDYRKPKRSKTLTESEKEEE 229
Query: 630 --------SRDLLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMR 475
S + L L ++LAYAHKISYTTFAPPE PQD +MR
Sbjct: 230 EDDDNVTSSSTTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDEQMR 289
Query: 474 ASQLYHFADLDVGVPRXXXXXXXXXXXXXXXXXEINDVLMEPTPPREEM 328
ASQLY FADLD+G+P+ + L+EP PP E M
Sbjct: 290 ASQLYTFADLDIGLPKNVENMEKKV-----------EALIEPPPPPEAM 327
>ref|XP_010267723.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Nelumbo nucifera] gi|720037602|ref|XP_010267724.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 4 [Nelumbo nucifera]
gi|720037605|ref|XP_010267726.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 4 [Nelumbo
nucifera] gi|720037608|ref|XP_010267727.1| PREDICTED:
mediator of RNA polymerase II transcription subunit 4
[Nelumbo nucifera] gi|720037611|ref|XP_010267728.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 4 [Nelumbo nucifera]
Length = 427
Score = 169 bits (428), Expect = 3e-39
Identities = 121/313 (38%), Positives = 154/313 (49%), Gaps = 27/313 (8%)
Frame = -3
Query: 930 SLWSTSYSASLPPFLPGXXXXXXXXXXXSTKEILSLFHSLQTQLFESVAELQEILDLQDT 751
S W +S+ SLP FLP TKEILSLF SLQTQLFE+VAELQEILDLQD
Sbjct: 103 SFWLSSFRGSLPTFLPSQTPLDSSPST--TKEILSLFTSLQTQLFEAVAELQEILDLQDA 160
Query: 750 TNKLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYR-------------------- 631
K++R+I++KD+A+L+FANK+KE+E +LD LVDDY+DY
Sbjct: 161 KQKISRDIRAKDAAILAFANKLKEAEHVLDILVDDYSDYHRPKRSKPTTSEGNPENPPSY 220
Query: 630 --SRDLLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRASQLYH 457
S + +P L+L+ +L+YAH+ISYTTFAPPE PQ+ +MRASQLY+
Sbjct: 221 SSSTTITNP-LNLSNILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYN 279
Query: 456 FADLDVGVPRXXXXXXXXXXXXXXXXXEINDVLMEPTPPREEMXXXXXXXXXXXXXXXXX 277
FADLDVG+P+ +E PP +
Sbjct: 280 FADLDVGLPKTVETKEKTVVTLIEAPSL---KPVETNPPID----LAAIQGLIPPQLTIP 332
Query: 276 XGWRKGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNR-EGLPRIPAVQ----KPPE 112
GWR GM N+ E P PAV K PE
Sbjct: 333 SGWRPGMPVELPADLPVPPPGWKPGDPVTLPPLDALVGPNKGEDQPPRPAVSQMPPKAPE 392
Query: 111 AIQVKHVELDINP 73
IQV++V+LDINP
Sbjct: 393 PIQVRYVQLDINP 405
>ref|XP_009598014.1| PREDICTED: mediator of RNA polymerase II transcription subunit
4-like [Nicotiana tomentosiformis]
Length = 398
Score = 169 bits (428), Expect = 3e-39
Identities = 94/181 (51%), Positives = 119/181 (65%), Gaps = 13/181 (7%)
Frame = -3
Query: 930 SLWSTSYSASLPPFLPGXXXXXXXXXXXSTKEILSLFHSLQTQLFESVAELQEILDLQDT 751
S W ++ S P FLP S+KEILS+F SLQTQLFE+VAELQEILDLQD
Sbjct: 93 SHWLGAFRGSFPSFLPSGTPVPQDSFPSSSKEILSVFTSLQTQLFEAVAELQEILDLQDE 152
Query: 750 TNKLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYR-------------SRDLLHP 610
K+ REI+SKDS++L+FANK+KE+E +LD LVDDY+DYR S +
Sbjct: 153 KQKVIREIRSKDSSILAFANKLKEAERVLDMLVDDYSDYRRPKRAKLENDTEESSVTVAT 212
Query: 609 NLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRASQLYHFADLDVGVP 430
L L+++L+YAH+ISYTTFAPPE PQD +MRASQLY+F+DLDVG+P
Sbjct: 213 QLKLSDILSYAHRISYTTFAPPEFGTGQAPLRGALPPAPQDEQMRASQLYNFSDLDVGLP 272
Query: 429 R 427
+
Sbjct: 273 K 273
>gb|KFK24735.1| hypothetical protein AALP_AA8G017700 [Arabis alpina]
Length = 419
Score = 169 bits (428), Expect = 3e-39
Identities = 98/192 (51%), Positives = 117/192 (60%), Gaps = 24/192 (12%)
Frame = -3
Query: 930 SLWSTSYSASLPPFLPGXXXXXXXXXXXS----TKEILSLFHSLQTQLFESVAELQEILD 763
+LW +S+ SLP FL TKEILS F+SLQTQLFESV ELQEILD
Sbjct: 104 ALWLSSFRGSLPSFLSSHSLPPPPPLENPNPSSTKEILSQFNSLQTQLFESVTELQEILD 163
Query: 762 LQDTTNKLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYR---------------- 631
LQD K+ARE+KSKDS+LL+FANK+KE+E +LD LVDDY+DYR
Sbjct: 164 LQDAKQKIAREVKSKDSSLLAFANKLKEAERVLDMLVDDYSDYRKPKRSKTVIEEEDNDI 223
Query: 630 ----SRDLLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRASQL 463
S + L L ++LAYAHKISYTTFAPPE PQD +MRAS L
Sbjct: 224 DSSSSSTTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASHL 283
Query: 462 YHFADLDVGVPR 427
Y FADLD+G+P+
Sbjct: 284 YTFADLDIGLPK 295
>ref|XP_002870993.1| hypothetical protein ARALYDRAFT_487063 [Arabidopsis lyrata subsp.
lyrata] gi|297316830|gb|EFH47252.1| hypothetical protein
ARALYDRAFT_487063 [Arabidopsis lyrata subsp. lyrata]
Length = 428
Score = 169 bits (428), Expect = 3e-39
Identities = 115/312 (36%), Positives = 147/312 (47%), Gaps = 28/312 (8%)
Frame = -3
Query: 930 SLWSTSYSASLPPFLPGXXXXXXXXXXXS----TKEILSLFHSLQTQLFESVAELQEILD 763
+LW +++ SLP FL TKEILS F+SLQTQLFE+V ELQEILD
Sbjct: 108 ALWLSAFRGSLPSFLSSHSLPPPPPLENPNPSSTKEILSQFNSLQTQLFEAVTELQEILD 167
Query: 762 LQDTTNKLAREIKSKDSALLSFANKIKESELLLDHLVDDYADYR---------------- 631
LQD K+AREIKS+DS+LL+FANK+K++E +LD LV+DY+DYR
Sbjct: 168 LQDAKQKVAREIKSRDSSLLAFANKLKDAERVLDMLVEDYSDYRKPKRSKIVSEEEEDND 227
Query: 630 -----SRDLLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRASQ 466
S + L L ++LAYAHKISYTTFAPPE PQD +MRASQ
Sbjct: 228 NESSSSSTTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQ 287
Query: 465 LYHFADLDVGVPRXXXXXXXXXXXXXXXXXEINDVLMEPTPPREEMXXXXXXXXXXXXXX 286
LY FADLD+G+P+ + L+EP PP E
Sbjct: 288 LYAFADLDIGLPKTVENMEKKV-----------EALIEPPPPPPEAMDISAIHNLLPPNI 336
Query: 285 XXXXGWRKGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNREGLPRI---PAVQKPP 115
GW+ GM E + + +PP
Sbjct: 337 AVPSGWKPGMPVELPRDLPLPPPGWKPGDPVVLPPLESIAAPRAEDQQHMRPPQGLHRPP 396
Query: 114 EAIQVKHVELDI 79
+ IQV+ V+LDI
Sbjct: 397 DVIQVRAVQLDI 408