BLASTX nr result
ID: Anemarrhena21_contig00006546
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00006546
(4920 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEX94801.1| RNA polymerase beta' subunit (chloroplast) [Anema... 1555 0.0
gb|AEX94804.1| RNA polymerase beta' subunit (chloroplast) [Hosta... 1526 0.0
gb|AEZ49481.1| RNA polymerase beta'' subunit, partial [Hesperalo... 1523 0.0
ref|YP_009045556.1| RNA polymerase betasubunit (chloroplast) [Cy... 1519 0.0
gb|AEX94825.1| RNA polymerase beta' subunit (chloroplast) [Oziro... 1517 0.0
gb|AEX94805.1| RNA polymerase beta' subunit (chloroplast) [Manfr... 1516 0.0
gb|AEX94806.1| RNA polymerase beta' subunit (chloroplast) [Polia... 1514 0.0
gb|AAZ03984.1| RNA polymerase beta'' chain [Yucca schidigera] 1512 0.0
gb|AEX94810.1| RNA polymerase beta' subunit (chloroplast) [Amary... 1505 0.0
gb|AEZ49468.1| RNA polymerase beta'' subunit [Agapanthus praecox] 1505 0.0
gb|AEX94843.1| RNA polymerase beta' subunit (chloroplast) [Xanth... 1502 0.0
gb|AEX94823.1| RNA polymerase beta' subunit (chloroplast) [Drimi... 1502 0.0
gb|AEX94812.1| RNA polymerase beta' subunit (chloroplast) [Eucha... 1501 0.0
gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Lirio... 1501 0.0
gb|AEX94829.1| RNA polymerase beta' subunit (chloroplast) [Beauc... 1501 0.0
gb|AEX94813.1| RNA polymerase beta' subunit (chloroplast) [Scado... 1499 0.0
gb|AEX94827.1| RNA polymerase beta' subunit (chloroplast) [Cordy... 1498 0.0
gb|AEZ49469.1| RNA polymerase beta'' subunit [Albuca kirkii] 1498 0.0
gb|AEX94811.1| RNA polymerase beta' subunit (chloroplast) [Crinu... 1497 0.0
gb|AEX94803.1| RNA polymerase beta' subunit (chloroplast) [Echea... 1496 0.0
>gb|AEX94801.1| RNA polymerase beta' subunit (chloroplast) [Anemarrhena
asphodeloides]
Length = 1384
Score = 1555 bits (4026), Expect = 0.0
Identities = 783/807 (97%), Positives = 783/807 (97%)
Frame = -1
Query: 2421 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSIS 2242
MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSIS
Sbjct: 1 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSIS 60
Query: 2241 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 2062
LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN
Sbjct: 61 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 120
Query: 2061 PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 1882
PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT
Sbjct: 121 PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 180
Query: 1881 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 1702
EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE
Sbjct: 181 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 240
Query: 1701 KIFAQTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWI 1522
KIFAQTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWI
Sbjct: 241 KIFAQTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWI 300
Query: 1521 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSN 1342
CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR TAEHVRAPSN
Sbjct: 301 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSN 360
Query: 1341 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 1162
GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE
Sbjct: 361 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 420
Query: 1161 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWIL 982
QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWIL
Sbjct: 421 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWIL 480
Query: 981 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 802
AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD
Sbjct: 481 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 540
Query: 801 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISIEI 622
YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISIEI
Sbjct: 541 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISIEI 600
Query: 621 PINGILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQMK 442
PINGILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQMK
Sbjct: 601 PINGILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQMK 660
Query: 441 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 262
VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK
Sbjct: 661 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 720
Query: 261 IFSGDIHFPGETDKISRHSGILIPPGTXXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 82
IFSGDIHFPGETDKISRHSGILIPPGT NWIYVQRITPTKKKYFVLVRP
Sbjct: 721 IFSGDIHFPGETDKISRHSGILIPPGTEKKNSKESKKLKNWIYVQRITPTKKKYFVLVRP 780
Query: 81 VVTYEIADGINLAKLFPQDLL*EKDNV 1
VVTYEIADGINLAKLFPQDLL EKDNV
Sbjct: 781 VVTYEIADGINLAKLFPQDLLQEKDNV 807
>gb|AEX94804.1| RNA polymerase beta' subunit (chloroplast) [Hosta ventricosa]
Length = 1384
Score = 1526 bits (3950), Expect = 0.0
Identities = 769/807 (95%), Positives = 772/807 (95%)
Frame = -1
Query: 2421 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSIS 2242
MEVLMAERADLVF+NKVIDGTAMKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSIS
Sbjct: 1 MEVLMAERADLVFYNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60
Query: 2241 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 2062
LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN
Sbjct: 61 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 120
Query: 2061 PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 1882
PNFRMTDP NPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT
Sbjct: 121 PNFRMTDPSNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 180
Query: 1881 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 1702
EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE
Sbjct: 181 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 240
Query: 1701 KIFAQTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWI 1522
KIF QTLIGRVLADDIYMGIRCIATRNQDIG+GLANRFITFRAQ IYIRTPFTCRNTSWI
Sbjct: 241 KIFVQTLIGRVLADDIYMGIRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWI 300
Query: 1521 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSN 1342
CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR TAEHVRAPSN
Sbjct: 301 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSN 360
Query: 1341 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 1162
GKIK NEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE
Sbjct: 361 GKIKLNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 420
Query: 1161 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWIL 982
QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYS VHLLPKTSHLWIL
Sbjct: 421 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSNVHLLPKTSHLWIL 480
Query: 981 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 802
AGGPC SSIVSFSLHKDQDQMNVH FSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD
Sbjct: 481 AGGPCGSSIVSFSLHKDQDQMNVHFFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 540
Query: 801 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISIEI 622
YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSF ISIEI
Sbjct: 541 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFNISIEI 600
Query: 621 PINGILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQMK 442
PINGILRRNSILAYFDDPRYRRK SGITKYGTV DSIVKKEDLIEYRGAKEFSPKYQMK
Sbjct: 601 PINGILRRNSILAYFDDPRYRRKSSGITKYGTVEADSIVKKEDLIEYRGAKEFSPKYQMK 660
Query: 441 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 262
VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK
Sbjct: 661 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 720
Query: 261 IFSGDIHFPGETDKISRHSGILIPPGTXXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 82
IFSGDIHFPGETDKISRHSGILIPPGT NWIYVQRITPTKKKYFVLVRP
Sbjct: 721 IFSGDIHFPGETDKISRHSGILIPPGTKKKNSKESKKWKNWIYVQRITPTKKKYFVLVRP 780
Query: 81 VVTYEIADGINLAKLFPQDLL*EKDNV 1
VVTYEIADGINLAKLFPQDLL EKDNV
Sbjct: 781 VVTYEIADGINLAKLFPQDLLQEKDNV 807
>gb|AEZ49481.1| RNA polymerase beta'' subunit, partial [Hesperaloe parviflora]
Length = 1384
Score = 1523 bits (3944), Expect = 0.0
Identities = 767/807 (95%), Positives = 771/807 (95%)
Frame = -1
Query: 2421 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSIS 2242
MEVLMAERADLVF+NKVIDGTAMKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSIS
Sbjct: 1 MEVLMAERADLVFYNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60
Query: 2241 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 2062
LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN
Sbjct: 61 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 120
Query: 2061 PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 1882
PNFRMTDP NPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT
Sbjct: 121 PNFRMTDPSNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 180
Query: 1881 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 1702
EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE
Sbjct: 181 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 240
Query: 1701 KIFAQTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWI 1522
KIF QTLIGRVLADDIYMGIRCIATRNQDIG+GLANRFITFRAQ IYIRTPFTCRNTSW+
Sbjct: 241 KIFVQTLIGRVLADDIYMGIRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWV 300
Query: 1521 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSN 1342
CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR TAEHVRAPSN
Sbjct: 301 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSN 360
Query: 1341 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 1162
GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRD IHSVNIPPKSLILVQNDQYVESE
Sbjct: 361 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDTIHSVNIPPKSLILVQNDQYVESE 420
Query: 1161 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWIL 982
QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWS DVYHAPEYTYS VHLLPKTSHLWIL
Sbjct: 421 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSIDVYHAPEYTYSNVHLLPKTSHLWIL 480
Query: 981 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 802
AGGPC SSIVSFSLHKDQDQMNVH FSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD
Sbjct: 481 AGGPCGSSIVSFSLHKDQDQMNVHFFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 540
Query: 801 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISIEI 622
YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSF ISIEI
Sbjct: 541 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFNISIEI 600
Query: 621 PINGILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQMK 442
PINGILRRNSILAYFDDPRYRRK SGITKYGTV DSIVKKEDLIEYRGAKEFSPKYQMK
Sbjct: 601 PINGILRRNSILAYFDDPRYRRKSSGITKYGTVEADSIVKKEDLIEYRGAKEFSPKYQMK 660
Query: 441 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 262
VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK
Sbjct: 661 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 720
Query: 261 IFSGDIHFPGETDKISRHSGILIPPGTXXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 82
IFSGDIHFPGETDKISRHSGILIPPGT NWIYVQRITPTKKKYFVLVRP
Sbjct: 721 IFSGDIHFPGETDKISRHSGILIPPGTEKKNSKESKKLKNWIYVQRITPTKKKYFVLVRP 780
Query: 81 VVTYEIADGINLAKLFPQDLL*EKDNV 1
VVTYEIADGINLAKLFPQDLL EKDNV
Sbjct: 781 VVTYEIADGINLAKLFPQDLLQEKDNV 807
>ref|YP_009045556.1| RNA polymerase betasubunit (chloroplast) [Cypripedium macranthos]
gi|578888856|gb|AHI16739.1| RNA polymerase betasubunit
(chloroplast) (chloroplast) [Cypripedium macranthos]
Length = 1380
Score = 1519 bits (3932), Expect = 0.0
Identities = 765/803 (95%), Positives = 768/803 (95%)
Frame = -1
Query: 2409 MAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSISLGID 2230
MAERADLVF+NKVIDGTAMKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSISLGID
Sbjct: 1 MAERADLVFYNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGID 60
Query: 2229 DLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFR 2050
DLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFR
Sbjct: 61 DLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFR 120
Query: 2049 MTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYII 1870
MTDP NPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYII
Sbjct: 121 MTDPSNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYII 180
Query: 1869 SCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTEKIFA 1690
SCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTEKIF
Sbjct: 181 SCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTEKIFV 240
Query: 1689 QTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWICQLC 1510
QTLIGRVLADDIYMGIRCIATRNQDIG+GLANRFITFRAQ IYIRTPFTCRNTSWICQLC
Sbjct: 241 QTLIGRVLADDIYMGIRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQLC 300
Query: 1509 YGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSNGKIK 1330
YGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR TAEHVRAPSNGKIK
Sbjct: 301 YGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSNGKIK 360
Query: 1329 FNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESEQVIA 1150
NEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESEQVIA
Sbjct: 361 LNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESEQVIA 420
Query: 1149 EIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWILAGGP 970
EIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYS VHLLPKTSHLWILAGGP
Sbjct: 421 EIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSNVHLLPKTSHLWILAGGP 480
Query: 969 CRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILDYSRL 790
C SSIVSFSLHKDQDQMNVH FSVDEIDISDLSITNDRVRHKLLDPSGKKDREILDYSRL
Sbjct: 481 CGSSIVSFSLHKDQDQMNVHFFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILDYSRL 540
Query: 789 DRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISIEIPING 610
DRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSF ISIEIPING
Sbjct: 541 DRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFNISIEIPING 600
Query: 609 ILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQMKVDRF 430
ILRRNSILAYFDDPRYRRK SGITKYGTV DSIVKKEDLIEYRGAKEFSPKYQMKVDRF
Sbjct: 601 ILRRNSILAYFDDPRYRRKSSGITKYGTVEADSIVKKEDLIEYRGAKEFSPKYQMKVDRF 660
Query: 429 FFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSG 250
FFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSG
Sbjct: 661 FFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSG 720
Query: 249 DIHFPGETDKISRHSGILIPPGTXXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRPVVTY 70
DIHFPGETDKISRHSGILIPPGT NWIYVQRITPTKKKYFVLVRPVVTY
Sbjct: 721 DIHFPGETDKISRHSGILIPPGTKKKNSKESKKCKNWIYVQRITPTKKKYFVLVRPVVTY 780
Query: 69 EIADGINLAKLFPQDLL*EKDNV 1
EIADGINLAKLFPQDLL EKDNV
Sbjct: 781 EIADGINLAKLFPQDLLQEKDNV 803
>gb|AEX94825.1| RNA polymerase beta' subunit (chloroplast) [Oziroe biflora]
Length = 1386
Score = 1517 bits (3927), Expect = 0.0
Identities = 762/807 (94%), Positives = 770/807 (95%)
Frame = -1
Query: 2421 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSIS 2242
MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSIS
Sbjct: 1 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60
Query: 2241 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 2062
LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN
Sbjct: 61 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 120
Query: 2061 PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 1882
PNFRMTDP NPVHLMSFSGARGNASQ+HQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT
Sbjct: 121 PNFRMTDPSNPVHLMSFSGARGNASQIHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 180
Query: 1881 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 1702
EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPR+GVTE
Sbjct: 181 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRSGVTE 240
Query: 1701 KIFAQTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWI 1522
KIF QTLIGRVLADDIYMG+RCIATRNQDIG+GLANRFITFRAQ IYIRTPFTCRNTSWI
Sbjct: 241 KIFVQTLIGRVLADDIYMGVRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWI 300
Query: 1521 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSN 1342
CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR TAEHVRAPSN
Sbjct: 301 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSN 360
Query: 1341 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 1162
GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIH+VNIPPKSLILVQNDQYVESE
Sbjct: 361 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHNVNIPPKSLILVQNDQYVESE 420
Query: 1161 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWIL 982
QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYS VHLLPKTSHLWIL
Sbjct: 421 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSNVHLLPKTSHLWIL 480
Query: 981 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 802
AGG CRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITND+VRHKLLDPSGKKDREILD
Sbjct: 481 AGGTCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDQVRHKLLDPSGKKDREILD 540
Query: 801 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISIEI 622
YSRLDRIISNGHWNFIYPSILQENSDFLAK+RRNRF IPLQYDQEREKELIPSFGISIEI
Sbjct: 541 YSRLDRIISNGHWNFIYPSILQENSDFLAKRRRNRFFIPLQYDQEREKELIPSFGISIEI 600
Query: 621 PINGILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQMK 442
PINGI RRNSILAYFDDPRYRRK SGITKYGTV VDSIV KEDLIEYRGAKEFS KYQMK
Sbjct: 601 PINGIFRRNSILAYFDDPRYRRKSSGITKYGTVEVDSIVNKEDLIEYRGAKEFSTKYQMK 660
Query: 441 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 262
V RFFFIPEEVHILPG SSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK
Sbjct: 661 VHRFFFIPEEVHILPGPSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 720
Query: 261 IFSGDIHFPGETDKISRHSGILIPPGTXXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 82
IFSGDIHFPGETDKISRHSGILIPPGT NWIYVQRITPTKKKYFVLVRP
Sbjct: 721 IFSGDIHFPGETDKISRHSGILIPPGTEKKNSNESKKLKNWIYVQRITPTKKKYFVLVRP 780
Query: 81 VVTYEIADGINLAKLFPQDLL*EKDNV 1
VVTYEIADGINLAKLFPQDLL EKDNV
Sbjct: 781 VVTYEIADGINLAKLFPQDLLQEKDNV 807
>gb|AEX94805.1| RNA polymerase beta' subunit (chloroplast) [Manfreda virginica]
Length = 1384
Score = 1516 bits (3926), Expect = 0.0
Identities = 765/807 (94%), Positives = 769/807 (95%)
Frame = -1
Query: 2421 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSIS 2242
MEVLMAERAD VF+NKVIDGTAMKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSIS
Sbjct: 1 MEVLMAERADPVFYNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60
Query: 2241 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 2062
LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN
Sbjct: 61 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 120
Query: 2061 PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 1882
PNFRMTDP NPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT
Sbjct: 121 PNFRMTDPSNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 180
Query: 1881 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 1702
EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE
Sbjct: 181 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 240
Query: 1701 KIFAQTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWI 1522
KIF QTLIGRVLADDIYMGIRCIATRNQDIG+GLANRFITFRAQ IYIRTPFTCRNTSWI
Sbjct: 241 KIFVQTLIGRVLADDIYMGIRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWI 300
Query: 1521 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSN 1342
CQLCYGRSPTHGDLVELGEA+GIIAGQSIGEPGTQLTLR TAEHVRAPSN
Sbjct: 301 CQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSN 360
Query: 1341 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 1162
GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE
Sbjct: 361 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 420
Query: 1161 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWIL 982
QVIAEIRAGTSTFHFKEK RKHIYSESEGEMHWSTDVYHAPEYTYS VHLLPKTSHLWIL
Sbjct: 421 QVIAEIRAGTSTFHFKEKARKHIYSESEGEMHWSTDVYHAPEYTYSNVHLLPKTSHLWIL 480
Query: 981 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 802
AGGPC SSIVSFSLHKDQDQMNVH FSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD
Sbjct: 481 AGGPCGSSIVSFSLHKDQDQMNVHFFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 540
Query: 801 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISIEI 622
YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSF ISIEI
Sbjct: 541 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFNISIEI 600
Query: 621 PINGILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQMK 442
PINGILRRNSILAYFDDPRYRRK SGITKYGTV DSIVKKEDLIEYRGAKEFSPKYQMK
Sbjct: 601 PINGILRRNSILAYFDDPRYRRKSSGITKYGTVEADSIVKKEDLIEYRGAKEFSPKYQMK 660
Query: 441 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 262
VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK
Sbjct: 661 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 720
Query: 261 IFSGDIHFPGETDKISRHSGILIPPGTXXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 82
IFSGDIHFPGETDKISRHSGILIPPGT N IYVQRITPTKKKYFVLVRP
Sbjct: 721 IFSGDIHFPGETDKISRHSGILIPPGTEKTNSKESKKLKNGIYVQRITPTKKKYFVLVRP 780
Query: 81 VVTYEIADGINLAKLFPQDLL*EKDNV 1
VVTYEIADGINL KLFPQDLL EKDNV
Sbjct: 781 VVTYEIADGINLEKLFPQDLLQEKDNV 807
>gb|AEX94806.1| RNA polymerase beta' subunit (chloroplast) [Polianthes sp. Pires
2011-05]
Length = 1384
Score = 1514 bits (3919), Expect = 0.0
Identities = 762/807 (94%), Positives = 769/807 (95%)
Frame = -1
Query: 2421 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSIS 2242
MEVLMAERAD VF+NKVIDGTAMKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSIS
Sbjct: 1 MEVLMAERADPVFYNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60
Query: 2241 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 2062
LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN
Sbjct: 61 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 120
Query: 2061 PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 1882
PNFRMTDP NPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT
Sbjct: 121 PNFRMTDPSNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 180
Query: 1881 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 1702
EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE
Sbjct: 181 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 240
Query: 1701 KIFAQTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWI 1522
KIF QTLIGRVLADDIYMGIRCIATRNQDIG+GLANRFITFRAQ IYIRTPFTCRNTSWI
Sbjct: 241 KIFVQTLIGRVLADDIYMGIRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWI 300
Query: 1521 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSN 1342
CQLCYGR+PTHGDLVELGEA+GIIAGQSIGEPGTQLTLR TAEHVRAP+N
Sbjct: 301 CQLCYGRNPTHGDLVELGEAIGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPAN 360
Query: 1341 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 1162
GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE
Sbjct: 361 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 420
Query: 1161 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWIL 982
QVIAEIRAGTSTFHFKEK RKHIYSESEGEMHWSTDVYHAPEYTYS VHLLPKTSHLWIL
Sbjct: 421 QVIAEIRAGTSTFHFKEKARKHIYSESEGEMHWSTDVYHAPEYTYSNVHLLPKTSHLWIL 480
Query: 981 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 802
AGGPC SSIVSFSLHKDQDQMNVH FSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD
Sbjct: 481 AGGPCGSSIVSFSLHKDQDQMNVHFFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 540
Query: 801 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISIEI 622
YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSF ISIEI
Sbjct: 541 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFNISIEI 600
Query: 621 PINGILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQMK 442
PINGILRRNSILAYFDDPRYRRK SGITKYGTV DSIVKKEDLIEYRGAKEFSPKYQMK
Sbjct: 601 PINGILRRNSILAYFDDPRYRRKSSGITKYGTVEADSIVKKEDLIEYRGAKEFSPKYQMK 660
Query: 441 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 262
VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK
Sbjct: 661 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 720
Query: 261 IFSGDIHFPGETDKISRHSGILIPPGTXXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 82
IFSGDIHFPGETDKISRHSGILIPPGT N IYVQRITPTKKKYFVLVRP
Sbjct: 721 IFSGDIHFPGETDKISRHSGILIPPGTEKTNSKESKKLKNGIYVQRITPTKKKYFVLVRP 780
Query: 81 VVTYEIADGINLAKLFPQDLL*EKDNV 1
+VTYEIADGINL KLFPQDLL EKDNV
Sbjct: 781 IVTYEIADGINLEKLFPQDLLQEKDNV 807
>gb|AAZ03984.1| RNA polymerase beta'' chain [Yucca schidigera]
Length = 1384
Score = 1512 bits (3914), Expect = 0.0
Identities = 763/807 (94%), Positives = 769/807 (95%)
Frame = -1
Query: 2421 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSIS 2242
MEVLMAERAD VF+NKVIDGTAMKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSIS
Sbjct: 1 MEVLMAERADPVFYNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60
Query: 2241 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 2062
LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN
Sbjct: 61 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 120
Query: 2061 PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 1882
PNFRMTDP NPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT
Sbjct: 121 PNFRMTDPSNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 180
Query: 1881 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 1702
EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE
Sbjct: 181 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 240
Query: 1701 KIFAQTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWI 1522
KIF QTLIGRVLADDIY+GIRCIATRNQDIG+GLANRFITFRAQ IYIRTPFTCRNTSWI
Sbjct: 241 KIFVQTLIGRVLADDIYIGIRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWI 300
Query: 1521 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSN 1342
CQLCYGRSPTHG LVELGEA+GIIAGQSIGEPGTQLTLR TAEHVRAPSN
Sbjct: 301 CQLCYGRSPTHGGLVELGEAIGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSN 360
Query: 1341 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 1162
GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE
Sbjct: 361 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 420
Query: 1161 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWIL 982
QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYS VHLLPKTSHLWIL
Sbjct: 421 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSNVHLLPKTSHLWIL 480
Query: 981 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 802
AGGPC SSIVSFSLHKDQDQMNVH FSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD
Sbjct: 481 AGGPCGSSIVSFSLHKDQDQMNVHFFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 540
Query: 801 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISIEI 622
YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSF ISIEI
Sbjct: 541 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFNISIEI 600
Query: 621 PINGILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQMK 442
PINGILRRNSILAYFDDPRYRRK SGI KYGTV DSIVKKEDLIEYRGAKEFSPKYQMK
Sbjct: 601 PINGILRRNSILAYFDDPRYRRKSSGIIKYGTVEADSIVKKEDLIEYRGAKEFSPKYQMK 660
Query: 441 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 262
VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK
Sbjct: 661 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 720
Query: 261 IFSGDIHFPGETDKISRHSGILIPPGTXXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 82
IFSGDIHFPGETDKISRHSGILIPPGT N IYVQRITPTKKKYFVLVRP
Sbjct: 721 IFSGDIHFPGETDKISRHSGILIPPGTEKTNSKESKKLKNGIYVQRITPTKKKYFVLVRP 780
Query: 81 VVTYEIADGINLAKLFPQDLL*EKDNV 1
VVTYEIADGINLAKLFPQDLL EK+NV
Sbjct: 781 VVTYEIADGINLAKLFPQDLLQEKENV 807
>gb|AEX94810.1| RNA polymerase beta' subunit (chloroplast) [Amaryllis belladonna]
Length = 1387
Score = 1505 bits (3897), Expect = 0.0
Identities = 761/808 (94%), Positives = 768/808 (95%), Gaps = 1/808 (0%)
Frame = -1
Query: 2421 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSIS 2242
MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSIS
Sbjct: 1 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60
Query: 2241 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 2062
LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN
Sbjct: 61 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 120
Query: 2061 PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 1882
PNFRMTDP NPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT
Sbjct: 121 PNFRMTDPSNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 180
Query: 1881 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 1702
EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNG+TE
Sbjct: 181 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGMTE 240
Query: 1701 KIFAQTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWI 1522
KIF QTLIGRVLADDIYMGIRCIATRNQDIG+GLANRFITFRAQ IYIRTPFTCRNTSWI
Sbjct: 241 KIFVQTLIGRVLADDIYMGIRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWI 300
Query: 1521 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSN 1342
CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR TAEHVRAPSN
Sbjct: 301 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSN 360
Query: 1341 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 1162
GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDI+HSVNIPPKSLILVQNDQYVESE
Sbjct: 361 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDILHSVNIPPKSLILVQNDQYVESE 420
Query: 1161 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWIL 982
QVIAEIRAGTSTFHFKE+VRKHIYSESEGEMHWSTDVYHAPEYTYS VHLLPKTSHLWIL
Sbjct: 421 QVIAEIRAGTSTFHFKERVRKHIYSESEGEMHWSTDVYHAPEYTYSNVHLLPKTSHLWIL 480
Query: 981 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 802
AG PCRSSIVSFSLHKDQDQMNVHSF VDE ISD ITNDRVRHKLLDPSGKKDREILD
Sbjct: 481 AGSPCRSSIVSFSLHKDQDQMNVHSFFVDERYISDRLITNDRVRHKLLDPSGKKDREILD 540
Query: 801 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISIEI 622
YSRLDRIISNG+WNFIYPSILQENSDFLAKKRRNRFLI LQYDQEREKELIPSFGISIEI
Sbjct: 541 YSRLDRIISNGYWNFIYPSILQENSDFLAKKRRNRFLIALQYDQEREKELIPSFGISIEI 600
Query: 621 PINGILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQMK 442
PINGILRRNSILAYFDDPRYRRK SGITKYG V VDSIVKKEDLIEYRGAKEFSPKYQMK
Sbjct: 601 PINGILRRNSILAYFDDPRYRRKSSGITKYGIVEVDSIVKKEDLIEYRGAKEFSPKYQMK 660
Query: 441 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 262
VDRFFFIPEEVHILPGSS IMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK
Sbjct: 661 VDRFFFIPEEVHILPGSSPIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 720
Query: 261 IFSGDIHFPGETDKISRHSGILIPPGT-XXXXXXXXXXXXNWIYVQRITPTKKKYFVLVR 85
IFSGDIHFPGETDKIS+HSGILIPPGT NWIYVQRITPTKKKYFVLVR
Sbjct: 721 IFSGDIHFPGETDKISKHSGILIPPGTEKKNSKESKKKLKNWIYVQRITPTKKKYFVLVR 780
Query: 84 PVVTYEIADGINLAKLFPQDLL*EKDNV 1
PVVTYEIADGINLAKLFPQDLL EKDNV
Sbjct: 781 PVVTYEIADGINLAKLFPQDLLQEKDNV 808
>gb|AEZ49468.1| RNA polymerase beta'' subunit [Agapanthus praecox]
Length = 1370
Score = 1505 bits (3896), Expect = 0.0
Identities = 757/807 (93%), Positives = 767/807 (95%)
Frame = -1
Query: 2421 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSIS 2242
MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSIS
Sbjct: 1 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60
Query: 2241 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 2062
LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN
Sbjct: 61 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 120
Query: 2061 PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 1882
PNFRMTDP NPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNL EGLSLT
Sbjct: 121 PNFRMTDPSNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLCEGLSLT 180
Query: 1881 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 1702
EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPR+GVTE
Sbjct: 181 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRHGVTE 240
Query: 1701 KIFAQTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWI 1522
KIF QTLIGRVLADDIYMGIRCIATRNQDIG+GLANRFITFRAQ IYIRTPFTCRNTSWI
Sbjct: 241 KIFVQTLIGRVLADDIYMGIRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWI 300
Query: 1521 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSN 1342
CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR TAEHVRAPSN
Sbjct: 301 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSN 360
Query: 1341 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 1162
GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE
Sbjct: 361 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 420
Query: 1161 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWIL 982
QVIAEIR+GTSTFHFKE++RKHI+SESEGEMHWSTDVYHAPEYTYS VHLLPKTSHLWIL
Sbjct: 421 QVIAEIRSGTSTFHFKERIRKHIFSESEGEMHWSTDVYHAPEYTYSNVHLLPKTSHLWIL 480
Query: 981 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 802
AGGPCRSSIVSFSLHKDQDQMNVHSFSVDE ISDLS TNDRVRHKLLDPSGKKDREI D
Sbjct: 481 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEKYISDLSTTNDRVRHKLLDPSGKKDREIFD 540
Query: 801 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISIEI 622
YSRLDRIIS GHWNFIY SILQE+SDFLAK+RRNRFLIPLQYDQE E ELIPSFGISIEI
Sbjct: 541 YSRLDRIISKGHWNFIYSSILQEDSDFLAKRRRNRFLIPLQYDQEGENELIPSFGISIEI 600
Query: 621 PINGILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQMK 442
PINGILRRNSILAYFDDPRYRRK SGITKYGTV VDSIVKKEDLIEYRGAKEFSPKYQMK
Sbjct: 601 PINGILRRNSILAYFDDPRYRRKSSGITKYGTVEVDSIVKKEDLIEYRGAKEFSPKYQMK 660
Query: 441 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 262
VDRFFFIPEEVHILPGSSSIMVRNNSIIG+DTQLALNTNTRSRVGGLVRVERKKKSIELK
Sbjct: 661 VDRFFFIPEEVHILPGSSSIMVRNNSIIGIDTQLALNTNTRSRVGGLVRVERKKKSIELK 720
Query: 261 IFSGDIHFPGETDKISRHSGILIPPGTXXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 82
IFSGDIHFPGETDKISRHSGILIPPG NWIYVQRITPTKKKYFVLVRP
Sbjct: 721 IFSGDIHFPGETDKISRHSGILIPPGAEKKNYKESKKLKNWIYVQRITPTKKKYFVLVRP 780
Query: 81 VVTYEIADGINLAKLFPQDLL*EKDNV 1
VVTYEIADGINLAKLFPQDLL EKDNV
Sbjct: 781 VVTYEIADGINLAKLFPQDLLQEKDNV 807
>gb|AEX94843.1| RNA polymerase beta' subunit (chloroplast) [Xanthorrhoea preissii]
Length = 1368
Score = 1502 bits (3889), Expect = 0.0
Identities = 757/807 (93%), Positives = 769/807 (95%)
Frame = -1
Query: 2421 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSIS 2242
MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSIS
Sbjct: 1 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60
Query: 2241 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 2062
LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN
Sbjct: 61 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 120
Query: 2061 PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 1882
PNFRMTDP NPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT
Sbjct: 121 PNFRMTDPSNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 180
Query: 1881 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 1702
EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNG+TE
Sbjct: 181 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGMTE 240
Query: 1701 KIFAQTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWI 1522
KIF QTLIGRVLADDIYMGIRCIATRNQDIG+GLANRFITFRAQ IYIRTPFTCRNTSWI
Sbjct: 241 KIFVQTLIGRVLADDIYMGIRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWI 300
Query: 1521 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSN 1342
CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR TAEHVRAPSN
Sbjct: 301 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSN 360
Query: 1341 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 1162
GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESR+I+HSVNIPPKSLILVQNDQYVESE
Sbjct: 361 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRNILHSVNIPPKSLILVQNDQYVESE 420
Query: 1161 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWIL 982
QVIAEIRA TSTFHFKE+VRKHIYSESEGEMHWSTDVYHAPEYTYS +HLLPKTSHLWIL
Sbjct: 421 QVIAEIRARTSTFHFKERVRKHIYSESEGEMHWSTDVYHAPEYTYSNIHLLPKTSHLWIL 480
Query: 981 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 802
AGGPC+SSIVSFSLHKDQDQMNV SFSV E ISDLSITNDRVRHKLLDPSGKKDREILD
Sbjct: 481 AGGPCKSSIVSFSLHKDQDQMNVRSFSVAERYISDLSITNDRVRHKLLDPSGKKDREILD 540
Query: 801 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISIEI 622
YSRLDRIISNGHWNFIYPSILQENSDFLAK+RRNRFLIPLQYDQEREKELIP FGISIEI
Sbjct: 541 YSRLDRIISNGHWNFIYPSILQENSDFLAKRRRNRFLIPLQYDQEREKELIPPFGISIEI 600
Query: 621 PINGILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQMK 442
PINGILRRNSILAYFDDPRYRRK SGITKYGTVGVDSIVKKEDLIEY+GAKEFSPKYQMK
Sbjct: 601 PINGILRRNSILAYFDDPRYRRKSSGITKYGTVGVDSIVKKEDLIEYQGAKEFSPKYQMK 660
Query: 441 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 262
VDRFFFIPEEVHILPGSSSIMV+NNSIIGVDTQLAL NTRSRVGGLVRVERKKKS+ELK
Sbjct: 661 VDRFFFIPEEVHILPGSSSIMVQNNSIIGVDTQLAL--NTRSRVGGLVRVERKKKSMELK 718
Query: 261 IFSGDIHFPGETDKISRHSGILIPPGTXXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 82
IFSGDIHFPGETDKISRHSGILIPPGT NWIYVQRITPTKKKYFVLVRP
Sbjct: 719 IFSGDIHFPGETDKISRHSGILIPPGTKKKNSKESQNFQNWIYVQRITPTKKKYFVLVRP 778
Query: 81 VVTYEIADGINLAKLFPQDLL*EKDNV 1
VVTYEIADGIN AKLFPQDLL EKDNV
Sbjct: 779 VVTYEIADGINFAKLFPQDLLQEKDNV 805
>gb|AEX94823.1| RNA polymerase beta' subunit (chloroplast) [Drimia altissima]
Length = 1386
Score = 1502 bits (3888), Expect = 0.0
Identities = 756/807 (93%), Positives = 768/807 (95%)
Frame = -1
Query: 2421 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSIS 2242
MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSIS
Sbjct: 1 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60
Query: 2241 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 2062
LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN
Sbjct: 61 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 120
Query: 2061 PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 1882
PNFRMTDP NPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNL EGLSLT
Sbjct: 121 PNFRMTDPSNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLCEGLSLT 180
Query: 1881 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 1702
EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPR+GVTE
Sbjct: 181 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRSGVTE 240
Query: 1701 KIFAQTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWI 1522
KIF QTLIGRVLADDIY+GIRCIATRNQDIG+GLANRFITFRAQ IYIRTPFTCRNTSWI
Sbjct: 241 KIFVQTLIGRVLADDIYIGIRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWI 300
Query: 1521 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSN 1342
CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR TAEHVRAPSN
Sbjct: 301 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSN 360
Query: 1341 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 1162
GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIH+VNIPPKSLILVQNDQYVESE
Sbjct: 361 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHNVNIPPKSLILVQNDQYVESE 420
Query: 1161 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWIL 982
QVIAEIRAG STFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYS VHLLPKTSHLWIL
Sbjct: 421 QVIAEIRAGASTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSNVHLLPKTSHLWIL 480
Query: 981 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 802
GGPCRSSI+SFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLD S KK+REILD
Sbjct: 481 EGGPCRSSIMSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDLSLKKEREILD 540
Query: 801 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISIEI 622
YSRLDRIISNGHWNFIYPSILQ+N DFLAK+RRNRFLIPLQYDQEREKEL+PSFGISIEI
Sbjct: 541 YSRLDRIISNGHWNFIYPSILQKNYDFLAKRRRNRFLIPLQYDQEREKELMPSFGISIEI 600
Query: 621 PINGILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQMK 442
PINGILRRNSI AYFDDPRYRRK SGITKYGTV VDSIVKKEDLIEYRGAKEFSPKYQM+
Sbjct: 601 PINGILRRNSIFAYFDDPRYRRKSSGITKYGTVEVDSIVKKEDLIEYRGAKEFSPKYQMR 660
Query: 441 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 262
VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRV GLVRVERKKKSIELK
Sbjct: 661 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVAGLVRVERKKKSIELK 720
Query: 261 IFSGDIHFPGETDKISRHSGILIPPGTXXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 82
IFSGDI+FPGETDKISRHSGILIPPGT NWIYVQRITPTKKKYFVLVRP
Sbjct: 721 IFSGDIYFPGETDKISRHSGILIPPGTEKKNSNESKKLKNWIYVQRITPTKKKYFVLVRP 780
Query: 81 VVTYEIADGINLAKLFPQDLL*EKDNV 1
VV YEIADGINLAKLFPQDLL EKDNV
Sbjct: 781 VVAYEIADGINLAKLFPQDLLQEKDNV 807
>gb|AEX94812.1| RNA polymerase beta' subunit (chloroplast) [Eucharis x grandiflora]
Length = 1343
Score = 1501 bits (3886), Expect = 0.0
Identities = 756/804 (94%), Positives = 765/804 (95%), Gaps = 1/804 (0%)
Frame = -1
Query: 2409 MAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSISLGID 2230
MAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSISLGID
Sbjct: 1 MAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGID 60
Query: 2229 DLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFR 2050
DLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFR
Sbjct: 61 DLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFR 120
Query: 2049 MTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYII 1870
MTDP NPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYII
Sbjct: 121 MTDPSNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYII 180
Query: 1869 SCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTEKIFA 1690
SCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNG+TEKIF
Sbjct: 181 SCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGMTEKIFV 240
Query: 1689 QTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWICQLC 1510
QTLIGRVLADDIYMGIRCIATRNQDIG+GLANRFITFRAQ IYIRTPFTCRNTSWICQLC
Sbjct: 241 QTLIGRVLADDIYMGIRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQLC 300
Query: 1509 YGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSNGKIK 1330
YGRSPTHGDLVELGEA+GIIAGQSIGEPGTQLTLR TAEHVRAPSNGKIK
Sbjct: 301 YGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSNGKIK 360
Query: 1329 FNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESEQVIA 1150
FNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDI+HSVNIPPKSLILVQNDQYVESEQVIA
Sbjct: 361 FNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDILHSVNIPPKSLILVQNDQYVESEQVIA 420
Query: 1149 EIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWILAGGP 970
EIRAGTSTFHFKE+VRKHIYSESEGEMHWSTDVYHAPEYTYS VHLLPKTSHLWILAGGP
Sbjct: 421 EIRAGTSTFHFKERVRKHIYSESEGEMHWSTDVYHAPEYTYSNVHLLPKTSHLWILAGGP 480
Query: 969 CRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILDYSRL 790
CRSSIVSFSLHKDQDQMN HSF VDE ISD ITNDRVRHKLLDPSGKKDREILDYSRL
Sbjct: 481 CRSSIVSFSLHKDQDQMNAHSFFVDERYISDRLITNDRVRHKLLDPSGKKDREILDYSRL 540
Query: 789 DRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISIEIPING 610
DRIISNG+WNFIYPSILQENSDFLAK+RRNRFLIPLQYDQEREKELIPSFGISIEIPING
Sbjct: 541 DRIISNGYWNFIYPSILQENSDFLAKRRRNRFLIPLQYDQEREKELIPSFGISIEIPING 600
Query: 609 ILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQMKVDRF 430
ILRRNSILAYFDDPRYRRK SGITKYG V VDSIVKKEDLIEYRGAKEFSPKYQMKVDRF
Sbjct: 601 ILRRNSILAYFDDPRYRRKSSGITKYGIVEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRF 660
Query: 429 FFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSG 250
FF PEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSG
Sbjct: 661 FFFPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSG 720
Query: 249 DIHFPGETDKISRHSGILIPPGT-XXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRPVVT 73
DIHFPGETDKIS+HSGILIPPGT NWIYVQRITPTKKKYFVLVRPVVT
Sbjct: 721 DIHFPGETDKISKHSGILIPPGTEKKNSKESKKKLKNWIYVQRITPTKKKYFVLVRPVVT 780
Query: 72 YEIADGINLAKLFPQDLL*EKDNV 1
YEIADGINLAKLFPQDLL EKDNV
Sbjct: 781 YEIADGINLAKLFPQDLLQEKDNV 804
>gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Liriope spicata]
Length = 1385
Score = 1501 bits (3885), Expect = 0.0
Identities = 761/810 (93%), Positives = 767/810 (94%), Gaps = 3/810 (0%)
Frame = -1
Query: 2421 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSIS 2242
MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSIS
Sbjct: 1 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60
Query: 2241 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 2062
LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN
Sbjct: 61 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 120
Query: 2061 PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 1882
PNFRMTDP NPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT
Sbjct: 121 PNFRMTDPSNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 180
Query: 1881 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 1702
EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIR ISVSPRNGVTE
Sbjct: 181 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPRNGVTE 240
Query: 1701 KIFAQTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWI 1522
KIF QTLIGRVLADDIYMGIRCIA RNQDIG+GLANRFITFRAQ IYIRTPFTCRNTSWI
Sbjct: 241 KIFVQTLIGRVLADDIYMGIRCIAARNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWI 300
Query: 1521 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSN 1342
CQLCYGRSPTHGDLVELGEA+GIIAGQSIGEPGTQLTLR TAEHVRAPSN
Sbjct: 301 CQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSN 360
Query: 1341 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 1162
GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE
Sbjct: 361 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 420
Query: 1161 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWIL 982
QVIAEIRAGTSTFHFKE+VRKHIYSESEGEMHWSTDVYHAPEYTYS VHLLPKTSHLWIL
Sbjct: 421 QVIAEIRAGTSTFHFKERVRKHIYSESEGEMHWSTDVYHAPEYTYSNVHLLPKTSHLWIL 480
Query: 981 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSG--KKDREI 808
AGGPCRSSIVSFSLHKDQDQMNVHSFSVDE SDLSIT DRVRHKLLDPSG KKDREI
Sbjct: 481 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYSSDLSITKDRVRHKLLDPSGTRKKDREI 540
Query: 807 LDYSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISI 628
LDYSRLDRIISNGHWNFIYPSILQENSDFLAK+RRNRFLIPLQYDQ REKELI SFGISI
Sbjct: 541 LDYSRLDRIISNGHWNFIYPSILQENSDFLAKRRRNRFLIPLQYDQGREKELISSFGISI 600
Query: 627 EIPINGILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQ 448
EIPINGILRRNSILAYFDDPRYRRK SGITKYGT VDSIVKKEDLIEYRGAKEFSPKYQ
Sbjct: 601 EIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPKYQ 660
Query: 447 MKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIE 268
MKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIE
Sbjct: 661 MKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIE 720
Query: 267 LKIFSGDIHFPGETDKISRHSGILIPPGT-XXXXXXXXXXXXNWIYVQRITPTKKKYFVL 91
LKIFSGDIHFPGETDKISRHSGILIPPGT NWIYVQRITP KKKYFVL
Sbjct: 721 LKIFSGDIHFPGETDKISRHSGILIPPGTEKKNSKESKTKSKNWIYVQRITPIKKKYFVL 780
Query: 90 VRPVVTYEIADGINLAKLFPQDLL*EKDNV 1
VRPVVTYEIADGINLAKLFPQDLL EK+NV
Sbjct: 781 VRPVVTYEIADGINLAKLFPQDLLQEKENV 810
>gb|AEX94829.1| RNA polymerase beta' subunit (chloroplast) [Beaucarnea hookeri]
Length = 1385
Score = 1501 bits (3885), Expect = 0.0
Identities = 760/810 (93%), Positives = 767/810 (94%), Gaps = 3/810 (0%)
Frame = -1
Query: 2421 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSIS 2242
MEVLMAERADLVFHNKVIDGT MKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSIS
Sbjct: 1 MEVLMAERADLVFHNKVIDGTVMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60
Query: 2241 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 2062
LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN
Sbjct: 61 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 120
Query: 2061 PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 1882
PNFRMTDP NPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT
Sbjct: 121 PNFRMTDPSNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 180
Query: 1881 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 1702
EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIR I VSPRNGVTE
Sbjct: 181 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAIFVSPRNGVTE 240
Query: 1701 KIFAQTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWI 1522
KIF QTLIGRVLAD+IYMGIRCIA RNQDIG+GLANRFITFRAQ IYIRTPFTCRNTSWI
Sbjct: 241 KIFVQTLIGRVLADNIYMGIRCIAARNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWI 300
Query: 1521 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSN 1342
CQLCYGRSPTHGDLVELGEA+GIIAGQSIGEPGTQLTLR TAEHVRAPSN
Sbjct: 301 CQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSN 360
Query: 1341 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 1162
GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE
Sbjct: 361 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 420
Query: 1161 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWIL 982
QVIAEIRAGTSTFHFKE+VRKHIYSESEGEMHWSTDVYHAPEYTYS VHLLPKTSHLWIL
Sbjct: 421 QVIAEIRAGTSTFHFKERVRKHIYSESEGEMHWSTDVYHAPEYTYSNVHLLPKTSHLWIL 480
Query: 981 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSG--KKDREI 808
AGGPCRSSIVSFSLHKDQDQMNVHSFSVDE SDLSIT DRVRHKLLDPSG KKDREI
Sbjct: 481 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYSSDLSITKDRVRHKLLDPSGTRKKDREI 540
Query: 807 LDYSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISI 628
LDYSRLDRIISNGHWNFIYPSILQENSDFLAK+RRNRFLIPLQYDQEREKELIPSFGISI
Sbjct: 541 LDYSRLDRIISNGHWNFIYPSILQENSDFLAKRRRNRFLIPLQYDQEREKELIPSFGISI 600
Query: 627 EIPINGILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQ 448
EIPINGILRRNSILAYFDDPRYRRK SGITKYGT VDSIVKKEDLIEYRGAKEFSPKYQ
Sbjct: 601 EIPINGILRRNSILAYFDDPRYRRKSSGITKYGTAEVDSIVKKEDLIEYRGAKEFSPKYQ 660
Query: 447 MKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIE 268
MKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIE
Sbjct: 661 MKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIE 720
Query: 267 LKIFSGDIHFPGETDKISRHSGILIPPGT-XXXXXXXXXXXXNWIYVQRITPTKKKYFVL 91
LKIFSGDIHFPGETDKISRHSGILIPPGT NWIYVQRITP KKKYFVL
Sbjct: 721 LKIFSGDIHFPGETDKISRHSGILIPPGTEKKNSKESKTKSKNWIYVQRITPIKKKYFVL 780
Query: 90 VRPVVTYEIADGINLAKLFPQDLL*EKDNV 1
VRPVVTYEIADGINLAKLFPQDLL EK+NV
Sbjct: 781 VRPVVTYEIADGINLAKLFPQDLLQEKENV 810
>gb|AEX94813.1| RNA polymerase beta' subunit (chloroplast) [Scadoxus cinnabarinus]
Length = 1373
Score = 1499 bits (3880), Expect = 0.0
Identities = 755/804 (93%), Positives = 765/804 (95%), Gaps = 1/804 (0%)
Frame = -1
Query: 2409 MAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSISLGID 2230
MAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSISLGID
Sbjct: 1 MAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGID 60
Query: 2229 DLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFR 2050
DLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFR
Sbjct: 61 DLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFR 120
Query: 2049 MTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYII 1870
MTDP NPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYII
Sbjct: 121 MTDPSNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYII 180
Query: 1869 SCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTEKIFA 1690
SCYGARKGVVDTAVRTSDAGYLTRRLVEVVQ IIVRRTDCGTIRGISVSPRNG+TEKIF
Sbjct: 181 SCYGARKGVVDTAVRTSDAGYLTRRLVEVVQRIIVRRTDCGTIRGISVSPRNGMTEKIFV 240
Query: 1689 QTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWICQLC 1510
QTLIGRVLADDIYMGIRCIATRNQDIG+GLANRFI FRAQ IYIRTPFTCRNTSWICQLC
Sbjct: 241 QTLIGRVLADDIYMGIRCIATRNQDIGIGLANRFIIFRAQPIYIRTPFTCRNTSWICQLC 300
Query: 1509 YGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSNGKIK 1330
YGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR TAEHVRAPSNGKIK
Sbjct: 301 YGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSNGKIK 360
Query: 1329 FNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESEQVIA 1150
FNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDI+HSVNIPPKSLILVQNDQYVESEQVIA
Sbjct: 361 FNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDILHSVNIPPKSLILVQNDQYVESEQVIA 420
Query: 1149 EIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWILAGGP 970
EIRAGTSTFHFKE+VRKHIYSESEGEMHWSTDVYHAPEYTYS VHLLPKTSHLWILAGGP
Sbjct: 421 EIRAGTSTFHFKERVRKHIYSESEGEMHWSTDVYHAPEYTYSNVHLLPKTSHLWILAGGP 480
Query: 969 CRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILDYSRL 790
CRSSIVSFSLHKDQDQMN HSFSVDE ISD ITNDRV+HKLLDPSGKKDREILDYSRL
Sbjct: 481 CRSSIVSFSLHKDQDQMNAHSFSVDERYISDRLITNDRVKHKLLDPSGKKDREILDYSRL 540
Query: 789 DRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISIEIPING 610
DR+ISNGHWNFIYPSILQENSDFLAK+RRNRFLIPLQYDQEREKELIPSFGISIEIPING
Sbjct: 541 DRVISNGHWNFIYPSILQENSDFLAKRRRNRFLIPLQYDQEREKELIPSFGISIEIPING 600
Query: 609 ILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQMKVDRF 430
ILRRNSILAYF+DPRYRRK SGITKYG V VDSIVKKEDLIEYRGAKEFSPKYQMKVDRF
Sbjct: 601 ILRRNSILAYFEDPRYRRKSSGITKYGIVEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRF 660
Query: 429 FFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSG 250
FFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSG
Sbjct: 661 FFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSG 720
Query: 249 DIHFPGETDKISRHSGILIPPGT-XXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRPVVT 73
DIHFPGETDKISRHSGILIPPGT NWIYVQRITPTKKKYFVLVRPVVT
Sbjct: 721 DIHFPGETDKISRHSGILIPPGTKNKNSKESTKKLKNWIYVQRITPTKKKYFVLVRPVVT 780
Query: 72 YEIADGINLAKLFPQDLL*EKDNV 1
YEIADGINLAKLFPQDLL EK+NV
Sbjct: 781 YEIADGINLAKLFPQDLLQEKENV 804
>gb|AEX94827.1| RNA polymerase beta' subunit (chloroplast) [Cordyline australis]
Length = 1388
Score = 1498 bits (3878), Expect = 0.0
Identities = 762/810 (94%), Positives = 767/810 (94%), Gaps = 3/810 (0%)
Frame = -1
Query: 2421 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSIS 2242
MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSIS
Sbjct: 1 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60
Query: 2241 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 2062
LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN
Sbjct: 61 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 120
Query: 2061 PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 1882
PNFRMTDP NPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT
Sbjct: 121 PNFRMTDPSNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 180
Query: 1881 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 1702
EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIR ISVSP+NGVTE
Sbjct: 181 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRAISVSPQNGVTE 240
Query: 1701 KIFAQTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWI 1522
KIF QTLIGRVLADDIYMGIRCIA RNQDIG+GLANRFITFRAQ IYIRTPFTCRNTSWI
Sbjct: 241 KIFVQTLIGRVLADDIYMGIRCIAARNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWI 300
Query: 1521 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSN 1342
CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR TAEHVRAPSN
Sbjct: 301 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSN 360
Query: 1341 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 1162
GKIKFNEYLV+PTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE
Sbjct: 361 GKIKFNEYLVYPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 420
Query: 1161 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWIL 982
QVIAEIRAGTSTFHFKE+VRKHIYSESEGEMHWSTDVYHAPEYTYS VHLLPKTSHLWIL
Sbjct: 421 QVIAEIRAGTSTFHFKERVRKHIYSESEGEMHWSTDVYHAPEYTYSNVHLLPKTSHLWIL 480
Query: 981 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPS--GKKDREI 808
AGGPCRSSIVSFSLHKDQDQMNVHSFSVDE ISDLSITNDRVRHKLLDPS GKKDREI
Sbjct: 481 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYISDLSITNDRVRHKLLDPSGTGKKDREI 540
Query: 807 LDYSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISI 628
LDYSRLDRIISN HWNFIYPSILQENSDFLAK RRNRFLIPLQYDQEREKELIPSFGISI
Sbjct: 541 LDYSRLDRIISNSHWNFIYPSILQENSDFLAKGRRNRFLIPLQYDQEREKELIPSFGISI 600
Query: 627 EIPINGILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQ 448
EIPINGIL RNSILAYFDDPRYRRK SGITKYGTV VDSIVKKEDLIEYRGAKEFSPK Q
Sbjct: 601 EIPINGILCRNSILAYFDDPRYRRKSSGITKYGTVEVDSIVKKEDLIEYRGAKEFSPKNQ 660
Query: 447 MKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIE 268
MKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRV GLVRVERKKKSIE
Sbjct: 661 MKVDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVDGLVRVERKKKSIE 720
Query: 267 LKIFSGDIHFPGETDKISRHSGILIPPGT-XXXXXXXXXXXXNWIYVQRITPTKKKYFVL 91
LKIFSGDIHFPGE DKISRHSGILIPPGT NWIYVQRITPTKKKYFVL
Sbjct: 721 LKIFSGDIHFPGEADKISRHSGILIPPGTEKKNSKESKTKLKNWIYVQRITPTKKKYFVL 780
Query: 90 VRPVVTYEIADGINLAKLFPQDLL*EKDNV 1
VRPVVTYEIADGINLAKLFPQDLL EKDNV
Sbjct: 781 VRPVVTYEIADGINLAKLFPQDLLQEKDNV 810
>gb|AEZ49469.1| RNA polymerase beta'' subunit [Albuca kirkii]
Length = 1386
Score = 1498 bits (3877), Expect = 0.0
Identities = 755/807 (93%), Positives = 767/807 (95%)
Frame = -1
Query: 2421 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSIS 2242
MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSIS
Sbjct: 1 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60
Query: 2241 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 2062
LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN
Sbjct: 61 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 120
Query: 2061 PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 1882
PNFRMTDP NPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNL EGLSLT
Sbjct: 121 PNFRMTDPSNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLCEGLSLT 180
Query: 1881 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 1702
EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPR+GVTE
Sbjct: 181 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRSGVTE 240
Query: 1701 KIFAQTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWI 1522
KIF QTLIGRVLADDIY+GIRCIATRNQDIG+GLANRFITFRAQ IYIRTPFTCRNTSWI
Sbjct: 241 KIFVQTLIGRVLADDIYIGIRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWI 300
Query: 1521 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSN 1342
CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR TAEHVRAPSN
Sbjct: 301 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSN 360
Query: 1341 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 1162
GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIH+VNIPPKSLILVQNDQYVESE
Sbjct: 361 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHNVNIPPKSLILVQNDQYVESE 420
Query: 1161 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWIL 982
QVIAEIRAG STFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYS VHLLPKTSHLWIL
Sbjct: 421 QVIAEIRAGASTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSNVHLLPKTSHLWIL 480
Query: 981 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 802
AGGPCRSSI+SFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLD S KK+REILD
Sbjct: 481 AGGPCRSSIMSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDLSLKKEREILD 540
Query: 801 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISIEI 622
YSRLDRIISNGHWNFIYPSILQ+N DFLAK+RRNRFLIPLQYDQEREKEL+PSFGISIEI
Sbjct: 541 YSRLDRIISNGHWNFIYPSILQKNYDFLAKRRRNRFLIPLQYDQEREKELMPSFGISIEI 600
Query: 621 PINGILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQMK 442
PINGILRRNSI AYFDDPRYRRK SGITKYGTV VDSIVKKEDLIEYRGAKEFSPKYQM+
Sbjct: 601 PINGILRRNSIFAYFDDPRYRRKSSGITKYGTVEVDSIVKKEDLIEYRGAKEFSPKYQMR 660
Query: 441 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 262
VDRFFFIPEEVHIL GSSSIMVRNNSIIGVDTQLALNTNTRSRV GLVRVERKKKSIELK
Sbjct: 661 VDRFFFIPEEVHILLGSSSIMVRNNSIIGVDTQLALNTNTRSRVAGLVRVERKKKSIELK 720
Query: 261 IFSGDIHFPGETDKISRHSGILIPPGTXXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 82
IFSGDI+FPGETDKISRHSGILIPPGT NWIYVQRITPTKKKYFVLVRP
Sbjct: 721 IFSGDIYFPGETDKISRHSGILIPPGTEKKNSNESKKWKNWIYVQRITPTKKKYFVLVRP 780
Query: 81 VVTYEIADGINLAKLFPQDLL*EKDNV 1
VV YEIADGINLAKL PQDLL EKDNV
Sbjct: 781 VVAYEIADGINLAKLLPQDLLQEKDNV 807
>gb|AEX94811.1| RNA polymerase beta' subunit (chloroplast) [Crinum asiaticum]
Length = 1387
Score = 1497 bits (3876), Expect = 0.0
Identities = 757/808 (93%), Positives = 765/808 (94%), Gaps = 1/808 (0%)
Frame = -1
Query: 2421 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSIS 2242
MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSIS
Sbjct: 1 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60
Query: 2241 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 2062
LGIDDLLTIPSKGWLVQDAEQQSFILEK HHYGNVHAVEKLRQSIEIWYATSEYLRQEMN
Sbjct: 61 LGIDDLLTIPSKGWLVQDAEQQSFILEKDHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 120
Query: 2061 PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 1882
PNFRMTDP NPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT
Sbjct: 121 PNFRMTDPSNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 180
Query: 1881 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 1702
EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNG+ E
Sbjct: 181 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGMAE 240
Query: 1701 KIFAQTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWI 1522
KIF QTLIG VLADDIY+GIRCIATRNQDIG+GLANRFITFRAQ IYIRTPFTCRNTSWI
Sbjct: 241 KIFVQTLIGCVLADDIYVGIRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWI 300
Query: 1521 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSN 1342
CQ CYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLR TAEHVRAPSN
Sbjct: 301 CQFCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSN 360
Query: 1341 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 1162
GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDI+HSVNIPPKSLILVQNDQYVESE
Sbjct: 361 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDILHSVNIPPKSLILVQNDQYVESE 420
Query: 1161 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWIL 982
QVIAEIRAGTSTFHFKE+VRKHIYSESEGEMHWSTDVYHAPEYTYS VHLLPKTSHLWIL
Sbjct: 421 QVIAEIRAGTSTFHFKERVRKHIYSESEGEMHWSTDVYHAPEYTYSNVHLLPKTSHLWIL 480
Query: 981 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 802
AGGPC SSIVSFSLHK QDQMNVHSFSVDE ISD SITN RVRHKLLDPSGKKDREILD
Sbjct: 481 AGGPCGSSIVSFSLHKGQDQMNVHSFSVDERYISDPSITNGRVRHKLLDPSGKKDREILD 540
Query: 801 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISIEI 622
YSRLDRIISNGHWNFIYPSILQENSDFLAK+RRNRF+IPLQYDQEREKELIPSFGISIEI
Sbjct: 541 YSRLDRIISNGHWNFIYPSILQENSDFLAKRRRNRFIIPLQYDQEREKELIPSFGISIEI 600
Query: 621 PINGILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQMK 442
PINGILRRNSILAYFDDPRYRRK SGITKYG V DSIVKKEDLIEYRGAKEFSPKYQMK
Sbjct: 601 PINGILRRNSILAYFDDPRYRRKSSGITKYGIVEADSIVKKEDLIEYRGAKEFSPKYQMK 660
Query: 441 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 262
VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK
Sbjct: 661 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 720
Query: 261 IFSGDIHFPGETDKISRHSGILIPPGT-XXXXXXXXXXXXNWIYVQRITPTKKKYFVLVR 85
IFSGDIHFPGETDKISRHSGILIPPGT NWIYVQRITPTKKKYFVLVR
Sbjct: 721 IFSGDIHFPGETDKISRHSGILIPPGTEKKNSKESKKKWKNWIYVQRITPTKKKYFVLVR 780
Query: 84 PVVTYEIADGINLAKLFPQDLL*EKDNV 1
PVVTYEIADGINLAKLFPQDLL EKDNV
Sbjct: 781 PVVTYEIADGINLAKLFPQDLLQEKDNV 808
>gb|AEX94803.1| RNA polymerase beta' subunit (chloroplast) [Echeandia sp. Steele
1101]
Length = 1380
Score = 1496 bits (3873), Expect = 0.0
Identities = 756/807 (93%), Positives = 764/807 (94%)
Frame = -1
Query: 2421 MEVLMAERADLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQMKTLGFQQATATSIS 2242
MEVLMAERADLVF+NKVIDGTAMKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSIS
Sbjct: 1 MEVLMAERADLVFYNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSIS 60
Query: 2241 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 2062
LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN
Sbjct: 61 LGIDDLLTIPSKGWLVQDAEQQSFILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN 120
Query: 2061 PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 1882
PNFRMTDP NPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT
Sbjct: 121 PNFRMTDPSNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT 180
Query: 1881 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 1702
EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE
Sbjct: 181 EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTIRGISVSPRNGVTE 240
Query: 1701 KIFAQTLIGRVLADDIYMGIRCIATRNQDIGVGLANRFITFRAQAIYIRTPFTCRNTSWI 1522
KIF QTLIGRVLADDIYMGIRCIATRNQDIG+GLANRFIT R Q IYIRTPFTCRNTSWI
Sbjct: 241 KIFVQTLIGRVLADDIYMGIRCIATRNQDIGIGLANRFITLRTQPIYIRTPFTCRNTSWI 300
Query: 1521 CQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXTAEHVRAPSN 1342
CQLCYGR+PTHGDLVELGEAVGIIAGQSIGEPGTQLTLR TAEHVRAPSN
Sbjct: 301 CQLCYGRNPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSN 360
Query: 1341 GKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIESRDIIHSVNIPPKSLILVQNDQYVESE 1162
GKIKFNEYLVH TRTRHGHPAFLCSIDLYVTIES DIIHSVNIPPKSLILVQNDQYVESE
Sbjct: 361 GKIKFNEYLVHLTRTRHGHPAFLCSIDLYVTIESWDIIHSVNIPPKSLILVQNDQYVESE 420
Query: 1161 QVIAEIRAGTSTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSKVHLLPKTSHLWIL 982
QVIAEIRAGT TFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYS VHLLPKTSHLWIL
Sbjct: 421 QVIAEIRAGTPTFHFKEKVRKHIYSESEGEMHWSTDVYHAPEYTYSNVHLLPKTSHLWIL 480
Query: 981 AGGPCRSSIVSFSLHKDQDQMNVHSFSVDEIDISDLSITNDRVRHKLLDPSGKKDREILD 802
AGGPCRSSIVSFSLHKDQDQMNVH FSV++IDISDLSITNDR+RHKLLDPS KKDREILD
Sbjct: 481 AGGPCRSSIVSFSLHKDQDQMNVHFFSVNKIDISDLSITNDRIRHKLLDPSAKKDREILD 540
Query: 801 YSRLDRIISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFGISIEI 622
YSRLDR ISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSF ISIEI
Sbjct: 541 YSRLDRSISNGHWNFIYPSILQENSDFLAKKRRNRFLIPLQYDQEREKELIPSFSISIEI 600
Query: 621 PINGILRRNSILAYFDDPRYRRKGSGITKYGTVGVDSIVKKEDLIEYRGAKEFSPKYQMK 442
PINGILRRNSILAYFDDPRYRRK SGITKYGTV DS+VKKEDLIEYRGAKEFSPKYQMK
Sbjct: 601 PINGILRRNSILAYFDDPRYRRKSSGITKYGTVEADSLVKKEDLIEYRGAKEFSPKYQMK 660
Query: 441 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLALNTNTRSRVGGLVRVERKKKSIELK 262
VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLAL NTRSRVGGLVRVERKKKSIELK
Sbjct: 661 VDRFFFIPEEVHILPGSSSIMVRNNSIIGVDTQLAL--NTRSRVGGLVRVERKKKSIELK 718
Query: 261 IFSGDIHFPGETDKISRHSGILIPPGTXXXXXXXXXXXXNWIYVQRITPTKKKYFVLVRP 82
IFSGDIHFPGETDKISRHSGILIPPGT NWIYVQRITP KKKYFVLVRP
Sbjct: 719 IFSGDIHFPGETDKISRHSGILIPPGTKKKNSKESKKLKNWIYVQRITPIKKKYFVLVRP 778
Query: 81 VVTYEIADGINLAKLFPQDLL*EKDNV 1
VVTYEIADGINLAKLFPQDLL EKDNV
Sbjct: 779 VVTYEIADGINLAKLFPQDLLQEKDNV 805