BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00005057
         (711 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010921488.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   261   3e-67
ref|XP_008781117.1| PREDICTED: RNA polymerase II-associated prot...   260   6e-67
ref|XP_008781118.1| PREDICTED: RNA polymerase II-associated prot...   253   8e-65
ref|XP_008781116.1| PREDICTED: RNA polymerase II-associated prot...   253   8e-65
ref|XP_009416309.1| PREDICTED: RNA polymerase II-associated prot...   246   1e-62
ref|XP_009416301.1| PREDICTED: RNA polymerase II-associated prot...   245   2e-62
ref|XP_010659703.1| PREDICTED: RNA polymerase II-associated prot...   212   2e-52
emb|CBI39598.3| unnamed protein product [Vitis vinifera]              212   2e-52
ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated prot...   212   2e-52
ref|XP_008246007.1| PREDICTED: RNA polymerase II-associated prot...   211   3e-52
ref|XP_012088892.1| PREDICTED: RNA polymerase II-associated prot...   210   6e-52
ref|XP_012088891.1| PREDICTED: RNA polymerase II-associated prot...   210   6e-52
ref|XP_012088890.1| PREDICTED: RNA polymerase II-associated prot...   210   6e-52
gb|KDP23389.1| hypothetical protein JCGZ_23222 [Jatropha curcas]      210   6e-52
ref|XP_004302236.1| PREDICTED: RNA polymerase II-associated prot...   210   6e-52
ref|XP_009373288.1| PREDICTED: RNA polymerase II-associated prot...   209   2e-51
ref|XP_009373287.1| PREDICTED: RNA polymerase II-associated prot...   208   2e-51
ref|XP_008388472.1| PREDICTED: RNA polymerase II-associated prot...   208   2e-51
ref|XP_008388471.1| PREDICTED: RNA polymerase II-associated prot...   208   3e-51
gb|KDO81669.1| hypothetical protein CISIN_1g013696mg [Citrus sin...   206   1e-50

>ref|XP_010921488.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II-associated
           protein 3 [Elaeis guineensis]
          Length = 471

 Score =  261 bits (667), Expect = 3e-67
 Identities = 136/193 (70%), Positives = 152/193 (78%), Gaps = 4/193 (2%)
 Frame = -2

Query: 569 MAGASRKPDKDPTLEFKGFLKDLNDWDYLLNDKDQRMKGQAGQ----GSLRNAGNLDEDK 402
           MAG SRKPDKD +LEF+GFL DL  WDYLL DK  +MKGQ+ +    GSLRNAG ++ED+
Sbjct: 1   MAGVSRKPDKDRSLEFQGFLNDLEGWDYLLKDKGHKMKGQSHESNKRGSLRNAGKVNEDE 60

Query: 401 GRPXXXXXXXXXXXXXXXSGVSRFTTSFLSDEKLPDAASEKELGNEYFKQKKYLEAIECY 222
           G                   +S   +SF S+EKLPDAASEKELGNEYFKQKK+ EAIECY
Sbjct: 61  G--PLKKVPAVEVKSKYSDAISHMPSSFYSEEKLPDAASEKELGNEYFKQKKFPEAIECY 118

Query: 221 SRSIVLSPTSVSFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKF 42
           SRSI LSPTSV+FANRAMAY+K+KRFEEAENDCTEALNLDDRYVKAYSRRATARKELGK 
Sbjct: 119 SRSIALSPTSVAFANRAMAYLKLKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKL 178

Query: 41  KASMEDAEFAIRL 3
           KASMED+EFA RL
Sbjct: 179 KASMEDSEFATRL 191


>ref|XP_008781117.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X2
           [Phoenix dactylifera]
          Length = 420

 Score =  260 bits (664), Expect = 6e-67
 Identities = 136/193 (70%), Positives = 154/193 (79%), Gaps = 4/193 (2%)
 Frame = -2

Query: 569 MAGASRKPDKDPTLEFKGFLKDLNDWDYLLNDKDQRMKGQAGQ----GSLRNAGNLDEDK 402
           MAG S KPD+D +LEF+GFL DL  WDYLL DK  +MKGQ+ +    GSLRNAG ++EDK
Sbjct: 1   MAGVSGKPDRDRSLEFQGFLNDLEGWDYLLKDKGGKMKGQSHESNKPGSLRNAGKVNEDK 60

Query: 401 GRPXXXXXXXXXXXXXXXSGVSRFTTSFLSDEKLPDAASEKELGNEYFKQKKYLEAIECY 222
           G                 + +SR  +SF S+EKLPDAASEKELGNEYFKQKK+ EAIECY
Sbjct: 61  G------PLKKVPAVEVKNAMSRMRSSFYSEEKLPDAASEKELGNEYFKQKKFPEAIECY 114

Query: 221 SRSIVLSPTSVSFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKF 42
           SRSI LSPTSV+FANRAMAY+K+KRFEEAENDCTEALNLDDRYVKAYSRRATARKELGK 
Sbjct: 115 SRSIALSPTSVAFANRAMAYLKLKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKL 174

Query: 41  KASMEDAEFAIRL 3
           KASMED+EFA+RL
Sbjct: 175 KASMEDSEFAMRL 187


>ref|XP_008781118.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X3
           [Phoenix dactylifera]
          Length = 391

 Score =  253 bits (646), Expect = 8e-65
 Identities = 136/211 (64%), Positives = 153/211 (72%), Gaps = 22/211 (10%)
 Frame = -2

Query: 569 MAGASRKPDKDPTLEFKGFLKDLNDWDYLLNDKDQRMKGQAGQ----GSLRNAGNLDEDK 402
           MAG S KPD+D +LEF+GFL DL  WDYLL DK  +MKGQ+ +    GSLRNAG ++EDK
Sbjct: 1   MAGVSGKPDRDRSLEFQGFLNDLEGWDYLLKDKGGKMKGQSHESNKPGSLRNAGKVNEDK 60

Query: 401 G------------------RPXXXXXXXXXXXXXXXSGVSRFTTSFLSDEKLPDAASEKE 276
           G                                     +SR  +SF S+EKLPDAASEKE
Sbjct: 61  GPLKKVPAVEVKSKTNVVSEGSSRKIDERYNYLKYSDAMSRMRSSFYSEEKLPDAASEKE 120

Query: 275 LGNEYFKQKKYLEAIECYSRSIVLSPTSVSFANRAMAYIKVKRFEEAENDCTEALNLDDR 96
           LGNEYFKQKK+ EAIECYSRSI LSPTSV+FANRAMAY+K+KRFEEAENDCTEALNLDDR
Sbjct: 121 LGNEYFKQKKFPEAIECYSRSIALSPTSVAFANRAMAYLKLKRFEEAENDCTEALNLDDR 180

Query: 95  YVKAYSRRATARKELGKFKASMEDAEFAIRL 3
           YVKAYSRRATARKELGK KASMED+EFA+RL
Sbjct: 181 YVKAYSRRATARKELGKLKASMEDSEFAMRL 211


>ref|XP_008781116.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X1
           [Phoenix dactylifera]
          Length = 444

 Score =  253 bits (646), Expect = 8e-65
 Identities = 136/211 (64%), Positives = 153/211 (72%), Gaps = 22/211 (10%)
 Frame = -2

Query: 569 MAGASRKPDKDPTLEFKGFLKDLNDWDYLLNDKDQRMKGQAGQ----GSLRNAGNLDEDK 402
           MAG S KPD+D +LEF+GFL DL  WDYLL DK  +MKGQ+ +    GSLRNAG ++EDK
Sbjct: 1   MAGVSGKPDRDRSLEFQGFLNDLEGWDYLLKDKGGKMKGQSHESNKPGSLRNAGKVNEDK 60

Query: 401 G------------------RPXXXXXXXXXXXXXXXSGVSRFTTSFLSDEKLPDAASEKE 276
           G                                     +SR  +SF S+EKLPDAASEKE
Sbjct: 61  GPLKKVPAVEVKSKTNVVSEGSSRKIDERYNYLKYSDAMSRMRSSFYSEEKLPDAASEKE 120

Query: 275 LGNEYFKQKKYLEAIECYSRSIVLSPTSVSFANRAMAYIKVKRFEEAENDCTEALNLDDR 96
           LGNEYFKQKK+ EAIECYSRSI LSPTSV+FANRAMAY+K+KRFEEAENDCTEALNLDDR
Sbjct: 121 LGNEYFKQKKFPEAIECYSRSIALSPTSVAFANRAMAYLKLKRFEEAENDCTEALNLDDR 180

Query: 95  YVKAYSRRATARKELGKFKASMEDAEFAIRL 3
           YVKAYSRRATARKELGK KASMED+EFA+RL
Sbjct: 181 YVKAYSRRATARKELGKLKASMEDSEFAMRL 211


>ref|XP_009416309.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X5 [Musa
           acuminata subsp. malaccensis]
          Length = 408

 Score =  246 bits (627), Expect = 1e-62
 Identities = 126/189 (66%), Positives = 146/189 (77%)
 Frame = -2

Query: 569 MAGASRKPDKDPTLEFKGFLKDLNDWDYLLNDKDQRMKGQAGQGSLRNAGNLDEDKGRPX 390
           MAG SRKPD+D ++EFKGFL DL DWD LL DKD+++KG A +    N G +D  K  P 
Sbjct: 1   MAGVSRKPDRDRSMEFKGFLNDLKDWDDLLKDKDEKLKGHARRNKKPNPGIIDGYKEPPR 60

Query: 389 XXXXXXXXXXXXXXSGVSRFTTSFLSDEKLPDAASEKELGNEYFKQKKYLEAIECYSRSI 210
                             +  +S L+DE LPDAASEKELGNEYFKQK++LEAIECYSRSI
Sbjct: 61  ------------------KIYSSNLNDEALPDAASEKELGNEYFKQKRFLEAIECYSRSI 102

Query: 209 VLSPTSVSFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASM 30
            LSPTSV+FANRAMAY+K++RFEEAENDCTEALNLDDRYVKAYSRRATARKELGK KAS+
Sbjct: 103 ALSPTSVAFANRAMAYLKLRRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKLKASL 162

Query: 29  EDAEFAIRL 3
           EDA+FA+RL
Sbjct: 163 EDADFAVRL 171


>ref|XP_009416301.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X4 [Musa
           acuminata subsp. malaccensis]
          Length = 412

 Score =  245 bits (625), Expect = 2e-62
 Identities = 128/193 (66%), Positives = 149/193 (77%), Gaps = 4/193 (2%)
 Frame = -2

Query: 569 MAGASRKPDKDPTLEFKGFLKDLNDWDYLLNDKDQRMKGQAGQG----SLRNAGNLDEDK 402
           MAG SRKPD+D ++EFKGFL DL DWD LL DKD+++KG A +     SL+N G +D  K
Sbjct: 1   MAGVSRKPDRDRSMEFKGFLNDLKDWDDLLKDKDEKLKGHARRNKKPDSLQNPGIIDGYK 60

Query: 401 GRPXXXXXXXXXXXXXXXSGVSRFTTSFLSDEKLPDAASEKELGNEYFKQKKYLEAIECY 222
             P                   +  +S L+DE LPDAASEKELGNEYFKQK++LEAIECY
Sbjct: 61  EPPR------------------KIYSSNLNDEALPDAASEKELGNEYFKQKRFLEAIECY 102

Query: 221 SRSIVLSPTSVSFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKF 42
           SRSI LSPTSV+FANRAMAY+K++RFEEAENDCTEALNLDDRYVKAYSRRATARKELGK 
Sbjct: 103 SRSIALSPTSVAFANRAMAYLKLRRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKL 162

Query: 41  KASMEDAEFAIRL 3
           KAS+EDA+FA+RL
Sbjct: 163 KASLEDADFAVRL 175


>ref|XP_010659703.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Vitis
           vinifera]
          Length = 425

 Score =  212 bits (539), Expect = 2e-52
 Identities = 112/200 (56%), Positives = 142/200 (71%), Gaps = 14/200 (7%)
 Frame = -2

Query: 560 ASRKPDK---DPTLEFKGFLKDLNDWDYLLNDKDQRMKGQA-------GQGSLRNAGNLD 411
           A+R P K   D  L+F+GFL DL DW+  L +KD++MK QA        +G+++++  L 
Sbjct: 2   ATRFPSKHARDQALDFQGFLTDLQDWELSLKEKDKKMKAQAEEKDVPTARGNVKHSSKLS 61

Query: 410 EDKGRPXXXXXXXXXXXXXXXS----GVSRFTTSFLSDEKLPDAASEKELGNEYFKQKKY 243
              G                 S     +SR ++SF+++E LPDAASEKELGNEYFKQ+K+
Sbjct: 62  SSPGVSLRLGQSRSDTRQHEYSRNHDAISRISSSFMTEESLPDAASEKELGNEYFKQRKF 121

Query: 242 LEAIECYSRSIVLSPTSVSFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATA 63
            EAI+CYSRSI L PT+V++ANRAMAYIK+KRF EAE+DC EALNLDDRY+KAYSRRATA
Sbjct: 122 KEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAYSRRATA 181

Query: 62  RKELGKFKASMEDAEFAIRL 3
           RKELGKFK + EDAEFA+RL
Sbjct: 182 RKELGKFKEATEDAEFALRL 201


>emb|CBI39598.3| unnamed protein product [Vitis vinifera]
          Length = 1097

 Score =  212 bits (539), Expect = 2e-52
 Identities = 112/200 (56%), Positives = 142/200 (71%), Gaps = 14/200 (7%)
 Frame = -2

Query: 560  ASRKPDK---DPTLEFKGFLKDLNDWDYLLNDKDQRMKGQA-------GQGSLRNAGNLD 411
            A+R P K   D  L+F+GFL DL DW+  L +KD++MK QA        +G+++++  L 
Sbjct: 625  ATRFPSKHARDQALDFQGFLTDLQDWELSLKEKDKKMKAQAEEKDVPTARGNVKHSSKLS 684

Query: 410  EDKGRPXXXXXXXXXXXXXXXS----GVSRFTTSFLSDEKLPDAASEKELGNEYFKQKKY 243
               G                 S     +SR ++SF+++E LPDAASEKELGNEYFKQ+K+
Sbjct: 685  SSPGVSLRLGQSRSDTRQHEYSRNHDAISRISSSFMTEESLPDAASEKELGNEYFKQRKF 744

Query: 242  LEAIECYSRSIVLSPTSVSFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATA 63
             EAI+CYSRSI L PT+V++ANRAMAYIK+KRF EAE+DC EALNLDDRY+KAYSRRATA
Sbjct: 745  KEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAYSRRATA 804

Query: 62   RKELGKFKASMEDAEFAIRL 3
            RKELGKFK + EDAEFA+RL
Sbjct: 805  RKELGKFKEATEDAEFALRL 824


>ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Vitis
           vinifera]
          Length = 474

 Score =  212 bits (539), Expect = 2e-52
 Identities = 112/200 (56%), Positives = 142/200 (71%), Gaps = 14/200 (7%)
 Frame = -2

Query: 560 ASRKPDK---DPTLEFKGFLKDLNDWDYLLNDKDQRMKGQA-------GQGSLRNAGNLD 411
           A+R P K   D  L+F+GFL DL DW+  L +KD++MK QA        +G+++++  L 
Sbjct: 2   ATRFPSKHARDQALDFQGFLTDLQDWELSLKEKDKKMKAQAEEKDVPTARGNVKHSSKLS 61

Query: 410 EDKGRPXXXXXXXXXXXXXXXS----GVSRFTTSFLSDEKLPDAASEKELGNEYFKQKKY 243
              G                 S     +SR ++SF+++E LPDAASEKELGNEYFKQ+K+
Sbjct: 62  SSPGVSLRLGQSRSDTRQHEYSRNHDAISRISSSFMTEESLPDAASEKELGNEYFKQRKF 121

Query: 242 LEAIECYSRSIVLSPTSVSFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATA 63
            EAI+CYSRSI L PT+V++ANRAMAYIK+KRF EAE+DC EALNLDDRY+KAYSRRATA
Sbjct: 122 KEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAYSRRATA 181

Query: 62  RKELGKFKASMEDAEFAIRL 3
           RKELGKFK + EDAEFA+RL
Sbjct: 182 RKELGKFKEATEDAEFALRL 201


>ref|XP_008246007.1| PREDICTED: RNA polymerase II-associated protein 3 [Prunus mume]
          Length = 411

 Score =  211 bits (538), Expect = 3e-52
 Identities = 108/189 (57%), Positives = 133/189 (70%)
 Frame = -2

Query: 569 MAGASRKPDKDPTLEFKGFLKDLNDWDYLLNDKDQRMKGQAGQGSLRNAGNLDEDKGRPX 390
           MA A  K  +D  L+F+GFL DL DW+  L DKD++M+ Q          +L    G   
Sbjct: 1   MARAPNKHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQDSHQEKLKTRDLGTSSGN-- 58

Query: 389 XXXXXXXXXXXXXXSGVSRFTTSFLSDEKLPDAASEKELGNEYFKQKKYLEAIECYSRSI 210
                           ++  ++SF S++ LPDAASEKELGNEYFKQKK+ EAI+CYSRSI
Sbjct: 59  -------YDYSRNLDSINTMSSSFTSEDSLPDAASEKELGNEYFKQKKFKEAIDCYSRSI 111

Query: 209 VLSPTSVSFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASM 30
            LSP++V++ANRAMAYIK+K F EAE+DCTEALNLDDRY+KAYSRRATARKELGK K S+
Sbjct: 112 ALSPSAVAYANRAMAYIKIKSFREAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESI 171

Query: 29  EDAEFAIRL 3
           EDAEFA+RL
Sbjct: 172 EDAEFALRL 180


>ref|XP_012088892.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X3
           [Jatropha curcas]
          Length = 468

 Score =  210 bits (535), Expect = 6e-52
 Identities = 103/189 (54%), Positives = 133/189 (70%)
 Frame = -2

Query: 569 MAGASRKPDKDPTLEFKGFLKDLNDWDYLLNDKDQRMKGQAGQGSLRNAGNLDEDKGRPX 390
           MA    K  +D  L+F+GFL DL DW+  L DKD++MK  +   +  +  +  +      
Sbjct: 1   MARVPTKHGRDQALDFQGFLNDLQDWELSLKDKDKKMKPHSSDKNSESRRSTGKTSAIDS 60

Query: 389 XXXXXXXXXXXXXXSGVSRFTTSFLSDEKLPDAASEKELGNEYFKQKKYLEAIECYSRSI 210
                           + R  +SF+++E   DA SEKELGNEYFKQKKY EAIECYSRSI
Sbjct: 61  SRGSSGQHDYLRNFDAIERIPSSFIAEESAVDATSEKELGNEYFKQKKYKEAIECYSRSI 120

Query: 209 VLSPTSVSFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASM 30
            LSPT+V++ANRAMAY+K+++F+EAE+DCTEALNLDDRY+KAYSRRATARKELG+FK S+
Sbjct: 121 ALSPTAVAYANRAMAYLKIRKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGRFKKSL 180

Query: 29  EDAEFAIRL 3
           ED+EFA+RL
Sbjct: 181 EDSEFALRL 189


>ref|XP_012088891.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
           [Jatropha curcas]
          Length = 475

 Score =  210 bits (535), Expect = 6e-52
 Identities = 103/189 (54%), Positives = 133/189 (70%)
 Frame = -2

Query: 569 MAGASRKPDKDPTLEFKGFLKDLNDWDYLLNDKDQRMKGQAGQGSLRNAGNLDEDKGRPX 390
           MA    K  +D  L+F+GFL DL DW+  L DKD++MK  +   +  +  +  +      
Sbjct: 1   MARVPTKHGRDQALDFQGFLNDLQDWELSLKDKDKKMKPHSSDKNSESRRSTGKTSAIDS 60

Query: 389 XXXXXXXXXXXXXXSGVSRFTTSFLSDEKLPDAASEKELGNEYFKQKKYLEAIECYSRSI 210
                           + R  +SF+++E   DA SEKELGNEYFKQKKY EAIECYSRSI
Sbjct: 61  SRGSSGQHDYLRNFDAIERIPSSFIAEESAVDATSEKELGNEYFKQKKYKEAIECYSRSI 120

Query: 209 VLSPTSVSFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASM 30
            LSPT+V++ANRAMAY+K+++F+EAE+DCTEALNLDDRY+KAYSRRATARKELG+FK S+
Sbjct: 121 ALSPTAVAYANRAMAYLKIRKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGRFKKSL 180

Query: 29  EDAEFAIRL 3
           ED+EFA+RL
Sbjct: 181 EDSEFALRL 189


>ref|XP_012088890.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
           [Jatropha curcas]
          Length = 476

 Score =  210 bits (535), Expect = 6e-52
 Identities = 103/189 (54%), Positives = 133/189 (70%)
 Frame = -2

Query: 569 MAGASRKPDKDPTLEFKGFLKDLNDWDYLLNDKDQRMKGQAGQGSLRNAGNLDEDKGRPX 390
           MA    K  +D  L+F+GFL DL DW+  L DKD++MK  +   +  +  +  +      
Sbjct: 1   MARVPTKHGRDQALDFQGFLNDLQDWELSLKDKDKKMKPHSSDKNSESRRSTGKTSAIDS 60

Query: 389 XXXXXXXXXXXXXXSGVSRFTTSFLSDEKLPDAASEKELGNEYFKQKKYLEAIECYSRSI 210
                           + R  +SF+++E   DA SEKELGNEYFKQKKY EAIECYSRSI
Sbjct: 61  SRGSSGQHDYLRNFDAIERIPSSFIAEESAVDATSEKELGNEYFKQKKYKEAIECYSRSI 120

Query: 209 VLSPTSVSFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASM 30
            LSPT+V++ANRAMAY+K+++F+EAE+DCTEALNLDDRY+KAYSRRATARKELG+FK S+
Sbjct: 121 ALSPTAVAYANRAMAYLKIRKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGRFKKSL 180

Query: 29  EDAEFAIRL 3
           ED+EFA+RL
Sbjct: 181 EDSEFALRL 189


>gb|KDP23389.1| hypothetical protein JCGZ_23222 [Jatropha curcas]
          Length = 469

 Score =  210 bits (535), Expect = 6e-52
 Identities = 103/189 (54%), Positives = 133/189 (70%)
 Frame = -2

Query: 569 MAGASRKPDKDPTLEFKGFLKDLNDWDYLLNDKDQRMKGQAGQGSLRNAGNLDEDKGRPX 390
           MA    K  +D  L+F+GFL DL DW+  L DKD++MK  +   +  +  +  +      
Sbjct: 1   MARVPTKHGRDQALDFQGFLNDLQDWELSLKDKDKKMKPHSSDKNSESRRSTGKTSAIDS 60

Query: 389 XXXXXXXXXXXXXXSGVSRFTTSFLSDEKLPDAASEKELGNEYFKQKKYLEAIECYSRSI 210
                           + R  +SF+++E   DA SEKELGNEYFKQKKY EAIECYSRSI
Sbjct: 61  SRGSSGQHDYLRNFDAIERIPSSFIAEESAVDATSEKELGNEYFKQKKYKEAIECYSRSI 120

Query: 209 VLSPTSVSFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASM 30
            LSPT+V++ANRAMAY+K+++F+EAE+DCTEALNLDDRY+KAYSRRATARKELG+FK S+
Sbjct: 121 ALSPTAVAYANRAMAYLKIRKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGRFKKSL 180

Query: 29  EDAEFAIRL 3
           ED+EFA+RL
Sbjct: 181 EDSEFALRL 189


>ref|XP_004302236.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
           [Fragaria vesca subsp. vesca]
          Length = 407

 Score =  210 bits (535), Expect = 6e-52
 Identities = 110/189 (58%), Positives = 136/189 (71%)
 Frame = -2

Query: 569 MAGASRKPDKDPTLEFKGFLKDLNDWDYLLNDKDQRMKGQAGQGSLRNAGNLDEDKGRPX 390
           MA A  K  +D  L+F+GFL DL DW+  L DKD++M+ Q          N +  K R  
Sbjct: 1   MARAPSKHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQQP--------NKEAPKSRDF 52

Query: 389 XXXXXXXXXXXXXXSGVSRFTTSFLSDEKLPDAASEKELGNEYFKQKKYLEAIECYSRSI 210
                           ++  ++SF S++ LPDAASEK+LGNEYFKQKK+ EAI+CYSRSI
Sbjct: 53  GTSSYSTNYEP-----MNTVSSSFTSEDGLPDAASEKDLGNEYFKQKKFKEAIDCYSRSI 107

Query: 209 VLSPTSVSFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASM 30
            L+PT+V+FANRAM+YIK+KRF+EAENDCTEALNLDDRY+KAYSRRATARKELGK K S+
Sbjct: 108 ALTPTAVAFANRAMSYIKIKRFQEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESI 167

Query: 29  EDAEFAIRL 3
           EDAEFA+RL
Sbjct: 168 EDAEFALRL 176


>ref|XP_009373288.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Pyrus
           x bretschneideri]
          Length = 411

 Score =  209 bits (531), Expect = 2e-51
 Identities = 108/191 (56%), Positives = 134/191 (70%), Gaps = 2/191 (1%)
 Frame = -2

Query: 569 MAGASRKPDKDPTLEFKGFLKDLNDWDYLLNDKDQRMKGQAGQGS--LRNAGNLDEDKGR 396
           MA    K  +D  L+F+GFL DL DW+  L DKD++M+ Q  Q     R++G   E+   
Sbjct: 1   MASPPNKHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQVSQQEKLTRDSGTSSEN--- 57

Query: 395 PXXXXXXXXXXXXXXXSGVSRFTTSFLSDEKLPDAASEKELGNEYFKQKKYLEAIECYSR 216
                             + R ++S  S++ LPDAASEKELGNEYFKQKK+ EAI+CYSR
Sbjct: 58  ---------YDYSRNFDAIKRISSSLRSEDSLPDAASEKELGNEYFKQKKFKEAIDCYSR 108

Query: 215 SIVLSPTSVSFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKA 36
           SI LSP++V++ANR MA IK+KRF+EAE+DCTEALNLDDRY+KAYSRRATARKELGK K 
Sbjct: 109 SIALSPSAVAYANRGMACIKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKE 168

Query: 35  SMEDAEFAIRL 3
           S EDAEFA+RL
Sbjct: 169 SFEDAEFALRL 179


>ref|XP_009373287.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Pyrus
           x bretschneideri]
          Length = 412

 Score =  208 bits (530), Expect = 2e-51
 Identities = 108/192 (56%), Positives = 134/192 (69%), Gaps = 3/192 (1%)
 Frame = -2

Query: 569 MAGASRKPDKDPTLEFKGFLKDLNDWDYLLNDKDQRMKGQAGQGS---LRNAGNLDEDKG 399
           MA    K  +D  L+F+GFL DL DW+  L DKD++M+ Q  Q      R++G   E+  
Sbjct: 1   MASPPNKHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQVSQQEKLKTRDSGTSSEN-- 58

Query: 398 RPXXXXXXXXXXXXXXXSGVSRFTTSFLSDEKLPDAASEKELGNEYFKQKKYLEAIECYS 219
                              + R ++S  S++ LPDAASEKELGNEYFKQKK+ EAI+CYS
Sbjct: 59  ----------YDYSRNFDAIKRISSSLRSEDSLPDAASEKELGNEYFKQKKFKEAIDCYS 108

Query: 218 RSIVLSPTSVSFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFK 39
           RSI LSP++V++ANR MA IK+KRF+EAE+DCTEALNLDDRY+KAYSRRATARKELGK K
Sbjct: 109 RSIALSPSAVAYANRGMACIKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLK 168

Query: 38  ASMEDAEFAIRL 3
            S EDAEFA+RL
Sbjct: 169 ESFEDAEFALRL 180


>ref|XP_008388472.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Malus
           domestica]
          Length = 411

 Score =  208 bits (530), Expect = 2e-51
 Identities = 108/195 (55%), Positives = 135/195 (69%), Gaps = 6/195 (3%)
 Frame = -2

Query: 569 MAGASRKPDKDPTLEFKGFLKDLNDWDYLLNDKDQRMKGQAGQ------GSLRNAGNLDE 408
           MA    K  +D  L+F+GFL DL DW+  L DKD++M+ Q  Q       S  ++GN D 
Sbjct: 1   MARPPNKHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQVSQQEXLTRDSGTSSGNYDY 60

Query: 407 DKGRPXXXXXXXXXXXXXXXSGVSRFTTSFLSDEKLPDAASEKELGNEYFKQKKYLEAIE 228
            +                    + R ++S  S++ LPDAASEKELGNEYFKQKK+ EAI+
Sbjct: 61  SRN----------------FDAIKRISSSLRSEDSLPDAASEKELGNEYFKQKKFKEAID 104

Query: 227 CYSRSIVLSPTSVSFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELG 48
           CYSRSI LSP++V++ANR MAYIK++RF+EAE+DCT ALNLDDRY+KAYSRRATARKELG
Sbjct: 105 CYSRSIALSPSAVAYANRGMAYIKIRRFQEAEDDCTXALNLDDRYIKAYSRRATARKELG 164

Query: 47  KFKASMEDAEFAIRL 3
           K K S EDAEFA+RL
Sbjct: 165 KLKESFEDAEFALRL 179


>ref|XP_008388471.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Malus
           domestica]
          Length = 412

 Score =  208 bits (529), Expect = 3e-51
 Identities = 108/196 (55%), Positives = 135/196 (68%), Gaps = 7/196 (3%)
 Frame = -2

Query: 569 MAGASRKPDKDPTLEFKGFLKDLNDWDYLLNDKDQRMKGQAGQ-------GSLRNAGNLD 411
           MA    K  +D  L+F+GFL DL DW+  L DKD++M+ Q  Q        S  ++GN D
Sbjct: 1   MARPPNKHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQVSQQEXLKTRDSGTSSGNYD 60

Query: 410 EDKGRPXXXXXXXXXXXXXXXSGVSRFTTSFLSDEKLPDAASEKELGNEYFKQKKYLEAI 231
             +                    + R ++S  S++ LPDAASEKELGNEYFKQKK+ EAI
Sbjct: 61  YSRN----------------FDAIKRISSSLRSEDSLPDAASEKELGNEYFKQKKFKEAI 104

Query: 230 ECYSRSIVLSPTSVSFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKEL 51
           +CYSRSI LSP++V++ANR MAYIK++RF+EAE+DCT ALNLDDRY+KAYSRRATARKEL
Sbjct: 105 DCYSRSIALSPSAVAYANRGMAYIKIRRFQEAEDDCTXALNLDDRYIKAYSRRATARKEL 164

Query: 50  GKFKASMEDAEFAIRL 3
           GK K S EDAEFA+RL
Sbjct: 165 GKLKESFEDAEFALRL 180


>gb|KDO81669.1| hypothetical protein CISIN_1g013696mg [Citrus sinensis]
          Length = 372

 Score =  206 bits (523), Expect = 1e-50
 Identities = 104/183 (56%), Positives = 133/183 (72%)
 Frame = -2

Query: 551 KPDKDPTLEFKGFLKDLNDWDYLLNDKDQRMKGQAGQGSLRNAGNLDEDKGRPXXXXXXX 372
           K ++D  L+F+GFL DL DWD  LN+KD++MK +A      +  NL     +        
Sbjct: 3   KHNRDQALDFQGFLNDLQDWDLSLNEKDKKMKHKAS-----SKDNLVSSSLKSAKKPSPS 57

Query: 371 XXXXXXXXSGVSRFTTSFLSDEKLPDAASEKELGNEYFKQKKYLEAIECYSRSIVLSPTS 192
                     VS  ++S +++E  PDA SEKELGNE FKQKK+ EAI+CYSRSI LSPT+
Sbjct: 58  GNSYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTA 117

Query: 191 VSFANRAMAYIKVKRFEEAENDCTEALNLDDRYVKAYSRRATARKELGKFKASMEDAEFA 12
           V++ANRAMAY+K++RF+EAE+DCTEALNLDDRY+KAYSRRATARKELGK K S+ED+EFA
Sbjct: 118 VAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFA 177

Query: 11  IRL 3
           +RL
Sbjct: 178 LRL 180