BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00004194
         (3649 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010920271.1| PREDICTED: pentatricopeptide repeat-containi...  1223   0.0  
ref|XP_010920273.1| PREDICTED: pentatricopeptide repeat-containi...  1125   0.0  
ref|XP_010920272.1| PREDICTED: pentatricopeptide repeat-containi...  1106   0.0  
ref|XP_010255160.1| PREDICTED: pentatricopeptide repeat-containi...  1096   0.0  
ref|XP_010255161.1| PREDICTED: pentatricopeptide repeat-containi...  1093   0.0  
ref|XP_009413750.1| PREDICTED: pentatricopeptide repeat-containi...  1080   0.0  
ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containi...  1026   0.0  
emb|CBI37948.3| unnamed protein product [Vitis vinifera]              988   0.0  
ref|XP_007041957.1| Pentatricopeptide repeat-containing protein,...   981   0.0  
ref|XP_002534048.1| pentatricopeptide repeat-containing protein,...   978   0.0  
ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containi...   972   0.0  
ref|XP_008236179.1| PREDICTED: pentatricopeptide repeat-containi...   969   0.0  
ref|XP_012084399.1| PREDICTED: pentatricopeptide repeat-containi...   965   0.0  
ref|XP_007199677.1| hypothetical protein PRUPE_ppa000631mg [Prun...   961   0.0  
ref|XP_012442072.1| PREDICTED: pentatricopeptide repeat-containi...   958   0.0  
gb|KDO42798.1| hypothetical protein CISIN_1g005129mg [Citrus sin...   957   0.0  
ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containi...   956   0.0  
ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citr...   953   0.0  
ref|XP_010088683.1| hypothetical protein L484_003235 [Morus nota...   952   0.0  
ref|XP_012442077.1| PREDICTED: pentatricopeptide repeat-containi...   946   0.0  

>ref|XP_010920271.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Elaeis guineensis]
          Length = 1104

 Score = 1223 bits (3164), Expect = 0.0
 Identities = 685/1133 (60%), Positives = 814/1133 (71%), Gaps = 31/1133 (2%)
 Frame = -1

Query: 3541 MDVSITSKAQTLASSVPL---------SSQFHLP---SSIRREFLGCGTHLRPAGLRSRT 3398
            MD+  ++++QTL SS+ L         SS  HLP   S I++EF G G+ LRP G+RSR 
Sbjct: 1    MDICFSTRSQTLISSLSLLSTSTTTTSSSFSHLPLPCSIIQKEFPGFGSQLRPLGIRSRK 60

Query: 3397 TKRKIGLRIHSPRCLLHNPLDEN-ILXXXXXXATFATLQLIYINYSRWRRDAPKFSDDQK 3221
              RK+G +  SPRCL  + + EN +L      ATFA    + + YSR RR++P+F+  + 
Sbjct: 61   RCRKLGFQFQSPRCLFQDSVCENSVLVATVAVATFAAA--LQVMYSRRRRESPQFAIHEV 118

Query: 3220 GDGMVGSELCEQDEDILEYEAVGNPLLSGEGLHIKPCEIENAFERIYQNMDYEKVHDSDA 3041
             D +V   L E            +P++  E          +A  R   N+  E +  SD 
Sbjct: 119  PDVVVNVGLHESHH--------ADPIMYKE---------HSAIARDEANVSPE-ICASDI 160

Query: 3040 KDAKQLEFQKAVLAWEDNSVNEVQTGYEL-AYSPRESELIKTNGCTGSSSTPVLVNEVKT 2864
            KDA+ L+ Q  +        N+VQ   EL A+   ++   KT G      +   V+++  
Sbjct: 161  KDAQLLKLQGTLS-------NKVQRTSELPAFIRTDNASAKTTGTEEFKCSSSQVHKLDA 213

Query: 2863 VDGGALAAKMPNLLSEKE-EDIAVS-----------SCSVISAEKKSGESNQNNYELGHI 2720
            ++      K+P+ L+ K+ E +AVS           S S    EKK  E NQ+N EL  I
Sbjct: 214  LEQNDSGNKLPDSLTGKQREAVAVSDAPDIIVEPTFSWSSAQVEKKQIEINQDN-ELDCI 272

Query: 2719 ATKHSDVLISSYDGYLREPDEEVSNCNDEKQPXXXXXXXXXXXXXXSHHF-DDNTVCYSH 2543
            A K  ++  S YDG +++  + V   N+E                  H    DN+  YS 
Sbjct: 273  AAKGDELCPSIYDGLMKQNAKAVYAYNEEMPEVRSISCFKSLSAGPLHLILHDNSSSYSR 332

Query: 2542 LKTALPDADILAKGSPPTAETLIGS--LKESPLSKEDELIKGQGFTRDIGKTLVH-KSNN 2372
            L+ A+    I AK SP +AE    S    E   SK  E+ K   FTRD+G++  H   +N
Sbjct: 333  LRHAVKFGGIRAKASPCSAEGQKPSACFNEGRTSKGKEIDKLHRFTRDMGRSPGHGNDDN 392

Query: 2371 GDFSSFPQQNG-FRRHVNGPAXXXXXXXXXXXXXXXXDCVDVLERMERKGLLDMDKVHHA 2195
             + S FP+ NG   +  N P                 DCVD+LE MERKGLLDMDKVHH 
Sbjct: 393  ANLSLFPEPNGNLVKGTNYPPGYLRAYDRLLRHGRLRDCVDLLESMERKGLLDMDKVHHT 452

Query: 2194 TFLKACKSQKAVKEAFQFCKLIPNPTLSTFNMLLSVCASSQDFDGAFQAMLIIKEAGLKP 2015
            +FLKACK QKA+KEAF+F KLI NP++STFNMLLSVCASSQDFDGAFQ ML+IKEAGLKP
Sbjct: 453  SFLKACKGQKALKEAFRFSKLIRNPSMSTFNMLLSVCASSQDFDGAFQVMLLIKEAGLKP 512

Query: 2014 DCKLYTTLISTCAKCGKVDAMFEVFHEMVNAGVEPNVNTYGALIDGCARAGQVAKAFGAY 1835
            DCKLYTTLISTCAK GKVDAMFE+FHEMVNAG+EPNVNTYGALIDGCARAGQVAKAFGAY
Sbjct: 513  DCKLYTTLISTCAKSGKVDAMFEIFHEMVNAGIEPNVNTYGALIDGCARAGQVAKAFGAY 572

Query: 1834 GIMRSKKVQPDRVIFNALITACGQSGAVDRAFDVLAEMRAEPKPIDPDHVTIGALIKTCI 1655
            GIMRSKKVQPDRV+FNALITACG+SGAVDRAFDVLAEMRAEPKPIDPDHVTIGALIKTC 
Sbjct: 573  GIMRSKKVQPDRVVFNALITACGESGAVDRAFDVLAEMRAEPKPIDPDHVTIGALIKTCT 632

Query: 1654 QAGQVDRVPEVYRMLHMYNIRGTPEVYTIAVNSCSQTGDLEFALSIYNDMKKNAIVPDEM 1475
            QAGQVDR  EVY+MLH YNI+GTPEVYTIAV SCSQ GDLEFAL IY+DMK+N +VPDEM
Sbjct: 633  QAGQVDRAHEVYKMLHEYNIKGTPEVYTIAVKSCSQRGDLEFALRIYDDMKRNGVVPDEM 692

Query: 1474 FLSTLIDVAGHAGKVDTGFEILKNARSKGIRLGNVSYSSLMGACCNAKNWQKALELFEEI 1295
            FLSTLIDVAGHAGKVD  F IL++A++KG++LG+VSYSSLMGACCNAK+WQKALEL+EEI
Sbjct: 693  FLSTLIDVAGHAGKVDAAFRILQDAKNKGVQLGHVSYSSLMGACCNAKSWQKALELYEEI 752

Query: 1294 KAIKLLPTVSTLNALITSLCDGDQLLKSVEVLDEIKEAGVQPNIITYSILIVACEKKDEA 1115
            KAIKLLPTVS LNALITSLCDG Q+LKSVEVLDE+K+ GV PN+ITYS+LIV CE+  EA
Sbjct: 753  KAIKLLPTVSMLNALITSLCDGYQILKSVEVLDEMKKLGVSPNVITYSVLIVGCERAGEA 812

Query: 1114 ELGFTLFSKAKKDGILPNLIICRCLTGLCLKSLEKAYSLCEPIVTFNSGKPQIDSKWTSR 935
            ELGFTL ++AK DG+LPNLI+CRCLTGLCL+S EKA +  EPIVTFN G+PQID+KWTS 
Sbjct: 813  ELGFTLLAEAKGDGVLPNLIMCRCLTGLCLRSFEKACAGDEPIVTFNYGRPQIDNKWTSL 872

Query: 934  AIMVYRETISAGVIPTIEVFSQVLGCLQFPHDSSLRNRFVENLDLHIDASKCSNICSLLD 755
            AI VYRETISAGV PTIEVFSQVLGCLQFP DSS R +F+ENL +  D S+CSNI SLLD
Sbjct: 873  AIKVYRETISAGVKPTIEVFSQVLGCLQFPRDSSFRKKFIENLGISFDTSRCSNISSLLD 932

Query: 754  GFGEYDTRCFSVFEEAASLGVVPRISFKDNPIVVDARKLLTHTVEVYLLTILKALKHRLA 575
            GFGEYDTR FS+ EEAASLGVV R SFK++PIVVDARKL  H VEVYLLTILK LKHRLA
Sbjct: 933  GFGEYDTRSFSILEEAASLGVVSRFSFKESPIVVDARKLEIHAVEVYLLTILKGLKHRLA 992

Query: 574  AGARLPNITVLLPIEKTQIESSSGERRTVNIAGRVGQAVGSLLRRLGVKYSGDESYGKIR 395
            +GARLPNIT++LPIEKTQI+S+  E +T+ +AGRVGQAVGSLLRRLG+ Y GDESYGKIR
Sbjct: 993  SGARLPNITIVLPIEKTQIQSAKRE-KTIIVAGRVGQAVGSLLRRLGLPYQGDESYGKIR 1051

Query: 394  INGLALRRWFKPKLSGFSVSGRPGDMASISTRLAKGISDQQRDIRSTNNLSLE 236
            I GL+LRRWFKPK++G + + RPG+M   ST LAKGI+DQQR IRS NNLSLE
Sbjct: 1052 ITGLSLRRWFKPKITGSTFARRPGEMIPTSTHLAKGIADQQRSIRSNNNLSLE 1104


>ref|XP_010920273.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X3 [Elaeis guineensis]
          Length = 784

 Score = 1125 bits (2909), Expect = 0.0
 Identities = 576/773 (74%), Positives = 649/773 (83%), Gaps = 4/773 (0%)
 Frame = -1

Query: 2542 LKTALPDADILAKGSPPTAETLIGS--LKESPLSKEDELIKGQGFTRDIGKTLVH-KSNN 2372
            L+ A+    I AK SP +AE    S    E   SK  E+ K   FTRD+G++  H   +N
Sbjct: 13   LRHAVKFGGIRAKASPCSAEGQKPSACFNEGRTSKGKEIDKLHRFTRDMGRSPGHGNDDN 72

Query: 2371 GDFSSFPQQNG-FRRHVNGPAXXXXXXXXXXXXXXXXDCVDVLERMERKGLLDMDKVHHA 2195
             + S FP+ NG   +  N P                 DCVD+LE MERKGLLDMDKVHH 
Sbjct: 73   ANLSLFPEPNGNLVKGTNYPPGYLRAYDRLLRHGRLRDCVDLLESMERKGLLDMDKVHHT 132

Query: 2194 TFLKACKSQKAVKEAFQFCKLIPNPTLSTFNMLLSVCASSQDFDGAFQAMLIIKEAGLKP 2015
            +FLKACK QKA+KEAF+F KLI NP++STFNMLLSVCASSQDFDGAFQ ML+IKEAGLKP
Sbjct: 133  SFLKACKGQKALKEAFRFSKLIRNPSMSTFNMLLSVCASSQDFDGAFQVMLLIKEAGLKP 192

Query: 2014 DCKLYTTLISTCAKCGKVDAMFEVFHEMVNAGVEPNVNTYGALIDGCARAGQVAKAFGAY 1835
            DCKLYTTLISTCAK GKVDAMFE+FHEMVNAG+EPNVNTYGALIDGCARAGQVAKAFGAY
Sbjct: 193  DCKLYTTLISTCAKSGKVDAMFEIFHEMVNAGIEPNVNTYGALIDGCARAGQVAKAFGAY 252

Query: 1834 GIMRSKKVQPDRVIFNALITACGQSGAVDRAFDVLAEMRAEPKPIDPDHVTIGALIKTCI 1655
            GIMRSKKVQPDRV+FNALITACG+SGAVDRAFDVLAEMRAEPKPIDPDHVTIGALIKTC 
Sbjct: 253  GIMRSKKVQPDRVVFNALITACGESGAVDRAFDVLAEMRAEPKPIDPDHVTIGALIKTCT 312

Query: 1654 QAGQVDRVPEVYRMLHMYNIRGTPEVYTIAVNSCSQTGDLEFALSIYNDMKKNAIVPDEM 1475
            QAGQVDR  EVY+MLH YNI+GTPEVYTIAV SCSQ GDLEFAL IY+DMK+N +VPDEM
Sbjct: 313  QAGQVDRAHEVYKMLHEYNIKGTPEVYTIAVKSCSQRGDLEFALRIYDDMKRNGVVPDEM 372

Query: 1474 FLSTLIDVAGHAGKVDTGFEILKNARSKGIRLGNVSYSSLMGACCNAKNWQKALELFEEI 1295
            FLSTLIDVAGHAGKVD  F IL++A++KG++LG+VSYSSLMGACCNAK+WQKALEL+EEI
Sbjct: 373  FLSTLIDVAGHAGKVDAAFRILQDAKNKGVQLGHVSYSSLMGACCNAKSWQKALELYEEI 432

Query: 1294 KAIKLLPTVSTLNALITSLCDGDQLLKSVEVLDEIKEAGVQPNIITYSILIVACEKKDEA 1115
            KAIKLLPTVS LNALITSLCDG Q+LKSVEVLDE+K+ GV PN+ITYS+LIV CE+  EA
Sbjct: 433  KAIKLLPTVSMLNALITSLCDGYQILKSVEVLDEMKKLGVSPNVITYSVLIVGCERAGEA 492

Query: 1114 ELGFTLFSKAKKDGILPNLIICRCLTGLCLKSLEKAYSLCEPIVTFNSGKPQIDSKWTSR 935
            ELGFTL ++AK DG+LPNLI+CRCLTGLCL+S EKA +  EPIVTFN G+PQID+KWTS 
Sbjct: 493  ELGFTLLAEAKGDGVLPNLIMCRCLTGLCLRSFEKACAGDEPIVTFNYGRPQIDNKWTSL 552

Query: 934  AIMVYRETISAGVIPTIEVFSQVLGCLQFPHDSSLRNRFVENLDLHIDASKCSNICSLLD 755
            AI VYRETISAGV PTIEVFSQVLGCLQFP DSS R +F+ENL +  D S+CSNI SLLD
Sbjct: 553  AIKVYRETISAGVKPTIEVFSQVLGCLQFPRDSSFRKKFIENLGISFDTSRCSNISSLLD 612

Query: 754  GFGEYDTRCFSVFEEAASLGVVPRISFKDNPIVVDARKLLTHTVEVYLLTILKALKHRLA 575
            GFGEYDTR FS+ EEAASLGVV R SFK++PIVVDARKL  H VEVYLLTILK LKHRLA
Sbjct: 613  GFGEYDTRSFSILEEAASLGVVSRFSFKESPIVVDARKLEIHAVEVYLLTILKGLKHRLA 672

Query: 574  AGARLPNITVLLPIEKTQIESSSGERRTVNIAGRVGQAVGSLLRRLGVKYSGDESYGKIR 395
            +GARLPNIT++LPIEKTQI+S+  E +T+ +AGRVGQAVGSLLRRLG+ Y GDESYGKIR
Sbjct: 673  SGARLPNITIVLPIEKTQIQSAKRE-KTIIVAGRVGQAVGSLLRRLGLPYQGDESYGKIR 731

Query: 394  INGLALRRWFKPKLSGFSVSGRPGDMASISTRLAKGISDQQRDIRSTNNLSLE 236
            I GL+LRRWFKPK++G + + RPG+M   ST LAKGI+DQQR IRS NNLSLE
Sbjct: 732  ITGLSLRRWFKPKITGSTFARRPGEMIPTSTHLAKGIADQQRSIRSNNNLSLE 784


>ref|XP_010920272.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X2 [Elaeis guineensis]
          Length = 1039

 Score = 1106 bits (2861), Expect = 0.0
 Identities = 626/1054 (59%), Positives = 747/1054 (70%), Gaps = 31/1054 (2%)
 Frame = -1

Query: 3541 MDVSITSKAQTLASSVPL---------SSQFHLP---SSIRREFLGCGTHLRPAGLRSRT 3398
            MD+  ++++QTL SS+ L         SS  HLP   S I++EF G G+ LRP G+RSR 
Sbjct: 1    MDICFSTRSQTLISSLSLLSTSTTTTSSSFSHLPLPCSIIQKEFPGFGSQLRPLGIRSRK 60

Query: 3397 TKRKIGLRIHSPRCLLHNPLDEN-ILXXXXXXATFATLQLIYINYSRWRRDAPKFSDDQK 3221
              RK+G +  SPRCL  + + EN +L      ATFA    + + YSR RR++P+F+  + 
Sbjct: 61   RCRKLGFQFQSPRCLFQDSVCENSVLVATVAVATFAAA--LQVMYSRRRRESPQFAIHEV 118

Query: 3220 GDGMVGSELCEQDEDILEYEAVGNPLLSGEGLHIKPCEIENAFERIYQNMDYEKVHDSDA 3041
             D +V   L E            +P++  E          +A  R   N+  E +  SD 
Sbjct: 119  PDVVVNVGLHESHH--------ADPIMYKE---------HSAIARDEANVSPE-ICASDI 160

Query: 3040 KDAKQLEFQKAVLAWEDNSVNEVQTGYEL-AYSPRESELIKTNGCTGSSSTPVLVNEVKT 2864
            KDA+ L+ Q  +        N+VQ   EL A+   ++   KT G      +   V+++  
Sbjct: 161  KDAQLLKLQGTLS-------NKVQRTSELPAFIRTDNASAKTTGTEEFKCSSSQVHKLDA 213

Query: 2863 VDGGALAAKMPNLLSEKE-EDIAVS-----------SCSVISAEKKSGESNQNNYELGHI 2720
            ++      K+P+ L+ K+ E +AVS           S S    EKK  E NQ+N EL  I
Sbjct: 214  LEQNDSGNKLPDSLTGKQREAVAVSDAPDIIVEPTFSWSSAQVEKKQIEINQDN-ELDCI 272

Query: 2719 ATKHSDVLISSYDGYLREPDEEVSNCNDEKQPXXXXXXXXXXXXXXSHHF-DDNTVCYSH 2543
            A K  ++  S YDG +++  + V   N+E                  H    DN+  YS 
Sbjct: 273  AAKGDELCPSIYDGLMKQNAKAVYAYNEEMPEVRSISCFKSLSAGPLHLILHDNSSSYSR 332

Query: 2542 LKTALPDADILAKGSPPTAETLIGS--LKESPLSKEDELIKGQGFTRDIGKTLVH-KSNN 2372
            L+ A+    I AK SP +AE    S    E   SK  E+ K   FTRD+G++  H   +N
Sbjct: 333  LRHAVKFGGIRAKASPCSAEGQKPSACFNEGRTSKGKEIDKLHRFTRDMGRSPGHGNDDN 392

Query: 2371 GDFSSFPQQNG-FRRHVNGPAXXXXXXXXXXXXXXXXDCVDVLERMERKGLLDMDKVHHA 2195
             + S FP+ NG   +  N P                 DCVD+LE MERKGLLDMDKVHH 
Sbjct: 393  ANLSLFPEPNGNLVKGTNYPPGYLRAYDRLLRHGRLRDCVDLLESMERKGLLDMDKVHHT 452

Query: 2194 TFLKACKSQKAVKEAFQFCKLIPNPTLSTFNMLLSVCASSQDFDGAFQAMLIIKEAGLKP 2015
            +FLKACK QKA+KEAF+F KLI NP++STFNMLLSVCASSQDFDGAFQ ML+IKEAGLKP
Sbjct: 453  SFLKACKGQKALKEAFRFSKLIRNPSMSTFNMLLSVCASSQDFDGAFQVMLLIKEAGLKP 512

Query: 2014 DCKLYTTLISTCAKCGKVDAMFEVFHEMVNAGVEPNVNTYGALIDGCARAGQVAKAFGAY 1835
            DCKLYTTLISTCAK GKVDAMFE+FHEMVNAG+EPNVNTYGALIDGCARAGQVAKAFGAY
Sbjct: 513  DCKLYTTLISTCAKSGKVDAMFEIFHEMVNAGIEPNVNTYGALIDGCARAGQVAKAFGAY 572

Query: 1834 GIMRSKKVQPDRVIFNALITACGQSGAVDRAFDVLAEMRAEPKPIDPDHVTIGALIKTCI 1655
            GIMRSKKVQPDRV+FNALITACG+SGAVDRAFDVLAEMRAEPKPIDPDHVTIGALIKTC 
Sbjct: 573  GIMRSKKVQPDRVVFNALITACGESGAVDRAFDVLAEMRAEPKPIDPDHVTIGALIKTCT 632

Query: 1654 QAGQVDRVPEVYRMLHMYNIRGTPEVYTIAVNSCSQTGDLEFALSIYNDMKKNAIVPDEM 1475
            QAGQVDR  EVY+MLH YNI+GTPEVYTIAV SCSQ GDLEFAL IY+DMK+N +VPDEM
Sbjct: 633  QAGQVDRAHEVYKMLHEYNIKGTPEVYTIAVKSCSQRGDLEFALRIYDDMKRNGVVPDEM 692

Query: 1474 FLSTLIDVAGHAGKVDTGFEILKNARSKGIRLGNVSYSSLMGACCNAKNWQKALELFEEI 1295
            FLSTLIDVAGHAGKVD  F IL++A++KG++LG+VSYSSLMGACCNAK+WQKALEL+EEI
Sbjct: 693  FLSTLIDVAGHAGKVDAAFRILQDAKNKGVQLGHVSYSSLMGACCNAKSWQKALELYEEI 752

Query: 1294 KAIKLLPTVSTLNALITSLCDGDQLLKSVEVLDEIKEAGVQPNIITYSILIVACEKKDEA 1115
            KAIKLLPTVS LNALITSLCDG Q+LKSVEVLDE+K+ GV PN+ITYS+LIV CE+  EA
Sbjct: 753  KAIKLLPTVSMLNALITSLCDGYQILKSVEVLDEMKKLGVSPNVITYSVLIVGCERAGEA 812

Query: 1114 ELGFTLFSKAKKDGILPNLIICRCLTGLCLKSLEKAYSLCEPIVTFNSGKPQIDSKWTSR 935
            ELGFTL ++AK DG+LPNLI+CRCLTGLCL+S EKA +  EPIVTFN G+PQID+KWTS 
Sbjct: 813  ELGFTLLAEAKGDGVLPNLIMCRCLTGLCLRSFEKACAGDEPIVTFNYGRPQIDNKWTSL 872

Query: 934  AIMVYRETISAGVIPTIEVFSQVLGCLQFPHDSSLRNRFVENLDLHIDASKCSNICSLLD 755
            AI VYRETISAGV PTIEVFSQVLGCLQFP DSS R +F+ENL +  D S+CSNI SLLD
Sbjct: 873  AIKVYRETISAGVKPTIEVFSQVLGCLQFPRDSSFRKKFIENLGISFDTSRCSNISSLLD 932

Query: 754  GFGEYDTRCFSVFEEAASLGVVPRISFKDNPIVVDARKLLTHTVEVYLLTILKALKHRLA 575
            GFGEYDTR FS+ EEAASLGVV R SFK++PIVVDARKL  H VEVYLLTILK LKHRLA
Sbjct: 933  GFGEYDTRSFSILEEAASLGVVSRFSFKESPIVVDARKLEIHAVEVYLLTILKGLKHRLA 992

Query: 574  AGARLPNITVLLPIEKTQIESSSGERRTVNIAGR 473
            +GARLPNIT++LPIEKTQI+S+  E +T+ +AGR
Sbjct: 993  SGARLPNITIVLPIEKTQIQSAKRE-KTIIVAGR 1025


>ref|XP_010255160.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Nelumbo nucifera]
          Length = 1161

 Score = 1096 bits (2835), Expect = 0.0
 Identities = 624/1142 (54%), Positives = 786/1142 (68%), Gaps = 40/1142 (3%)
 Frame = -1

Query: 3541 MDVSITSKAQ--TLASSVPLSSQFHLPSS----------IRREFLGCGTHLRPAGLRSRT 3398
            MDV++++KAQ  TL S   +SS +   SS          +RREFLG    LR  G RSR 
Sbjct: 36   MDVNLSAKAQNLTLISCFTISSSYSSSSSSSTSSPRFCSLRREFLGSCDRLRFPGARSRR 95

Query: 3397 TKRKIGLRIHSPRCLLHNPLDENILXXXXXXATFATLQLIYINYSRWRRDAPKFSDDQKG 3218
              +K+G  I SPR L    L           ATF+ L ++Y  ++R ++DA + S  Q  
Sbjct: 96   KCKKLGFLIQSPRLLPRASLYSKPFLVIVAIATFSALTVVYSVHTRRKKDAQESSGTQDP 155

Query: 3217 DGMVGSELCEQDEDILEYEAVGNPLLSGEGLHI-KPCEIENAFERIYQNMDYEKVHDSDA 3041
            D      L +Q  D    ++V N +L  E +    P E     + I++    EK H++  
Sbjct: 156  DEFQNLALSKQSRDFTN-QSVDNQILDLEKISDGTPAE---ELKAIFEETS-EKGHNNLE 210

Query: 3040 KDAKQLEFQKAVLAWEDNSVNEVQTGYELAYS---PRESELIK-TNGCTGSSSTPVLVNE 2873
            K+ +  +F+K  L +E++   E     EL+YS    + S L K T     + S+PVL  E
Sbjct: 211  KEVQLSQFKKTALMFEESPFTEAS---ELSYSVCSTKSSILTKETESMDPTLSSPVL-GE 266

Query: 2872 VKTVDGGALAAKMPNLLSE--KEEDIAVSSCSVISAEKKSGESNQNNYELGHIATKHS-- 2705
              + +    A  MP L+ +  +EE +  S  S +  + KS       +    ++ +H   
Sbjct: 267  SASGEKVRFAKDMPELVLKGYQEEAVPWSELSGLLVDPKSSSVIHLKHVPAEVSQEHQFK 326

Query: 2704 -------DVLISSYDGYLREP-DEEVSNCNDEKQPXXXXXXXXXXXXXXSHHF--DDNTV 2555
                   +V +S+Y+G+ R    EE+    +E Q                 H   + N+ 
Sbjct: 327  NELDDEGEVQVSTYNGFFRPSFREEIHTFYEENQSGVRSISNFSSLKTVPPHISLNSNSN 386

Query: 2554 CYSHLKTALPDADILAKGSPPTAE-----TLIGSLKESPLSKEDELIKGQGFTRDIGKTL 2390
              S L+T +     +++G   T +       +   KE    +  +   G+GF RD GK L
Sbjct: 387  FSSLLRTNMLSGAEVSEGLHNTTDYHERKMPLSCYKEGSCHRRKDFRIGKGFPRDTGKKL 446

Query: 2389 VHKSNNGDFS-SFPQQNGFRRHV---NGPAXXXXXXXXXXXXXXXXDCVDVLERMERKGL 2222
              +  NGD +   PQ NG   HV   N  +                DCV++LE +ERKGL
Sbjct: 447  TPQ--NGDRNLHHPQPNGL--HVSDRNDISGSIDAYNRLLSDGRVTDCVELLEDLERKGL 502

Query: 2221 LDMDKVHHATFLKACKSQKAVKEAFQFCKLIPNPTLSTFNMLLSVCASSQDFDGAFQAML 2042
            LDM+KV+HA F   CKSQKAV EAF+F KLI NPT+STFNMLLSVCAS QD DGAFQ + 
Sbjct: 503  LDMNKVYHAKFFNTCKSQKAVNEAFRFIKLISNPTMSTFNMLLSVCASCQDSDGAFQVLQ 562

Query: 2041 IIKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVNAGVEPNVNTYGALIDGCARAG 1862
             +KEAGLK DCKLYTTLISTCAK GKVDAMFEVFHEMVNAGVEPNV+TYGALIDGCARAG
Sbjct: 563  FVKEAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCARAG 622

Query: 1861 QVAKAFGAYGIMRSKKVQPDRVIFNALITACGQSGAVDRAFDVLAEMRAEPKPIDPDHVT 1682
            QVAKAFGAYGIMRSKKV+PDRV+FNALITACGQSGAVDRAFDVLAEMR E +PIDPDHVT
Sbjct: 623  QVAKAFGAYGIMRSKKVKPDRVVFNALITACGQSGAVDRAFDVLAEMRTENQPIDPDHVT 682

Query: 1681 IGALIKTCIQAGQVDRVPEVYRMLHMYNIRGTPEVYTIAVNSCSQTGDLEFALSIYNDMK 1502
            +GALIKTC QAGQVDR  EVY M+H YNI+GTP+VYTIAVNSCSQTGDL+FAL+IY+DM+
Sbjct: 683  VGALIKTCTQAGQVDRAREVYMMIHEYNIKGTPDVYTIAVNSCSQTGDLDFALNIYSDMR 742

Query: 1501 KNAIVPDEMFLSTLIDVAGHAGKVDTGFEILKNARSKGIRLGNVSYSSLMGACCNAKNWQ 1322
            +N +VPDEMFLS LIDVAGHAGK+D  F+I+++A+ +G++LGNVSYSSLMGAC NAKNWQ
Sbjct: 743  RNGVVPDEMFLSALIDVAGHAGKLDVAFQIIEDAKKQGMQLGNVSYSSLMGACSNAKNWQ 802

Query: 1321 KALELFEEIKAIKLLPTVSTLNALITSLCDGDQLLKSVEVLDEIKEAGVQPNIITYSILI 1142
            KA EL+E I AIKL PTVS +NALITSLC+G+QL K+V+VLDE+KE G+ P  ITYSIL+
Sbjct: 803  KAQELYENIMAIKLHPTVSMMNALITSLCEGNQLQKAVKVLDEMKEIGICPENITYSILL 862

Query: 1141 VACEKKDEAELGFTLFSKAKKDGILPNLIICRCLTGLCLKSLEKAYSLCEPIVTFNSGKP 962
            VACEKKDE ELGFTL S+AKK+GI+PNLI+CRCLTG+CL+  EK+ S+ EP+++F+SGKP
Sbjct: 863  VACEKKDELELGFTLLSEAKKEGIVPNLIMCRCLTGMCLRRFEKSSSMGEPVLSFSSGKP 922

Query: 961  QIDSKWTSRAIMVYRETISAGVIPTIEVFSQVLGCLQFPHDSSLRNRFVENLDLHIDASK 782
            Q+++KWTS A+MVYRETI AGV+PT+EVFSQVLGCLQ P D+SLR R VENL ++  +SK
Sbjct: 923  QVNNKWTSLALMVYRETIVAGVVPTMEVFSQVLGCLQLPRDTSLRERLVENLGVNTSSSK 982

Query: 781  CSNICSLLDGFGEYDTRCFSVFEEAASLGVVPRISFKDNPIVVDARKLLTHTVEVYLLTI 602
             S+I SL+DGFGEYD+R FS+ EEAASLGVVP +SFK++PIVVD RKL  HT EVY LTI
Sbjct: 983  HSSIYSLIDGFGEYDSRSFSLLEEAASLGVVPCVSFKESPIVVDTRKLDVHTAEVYFLTI 1042

Query: 601  LKALKHRLAAGARLPNITVLLPIEKTQIESSSGERRTVNIAGRVGQAVGSLLRRLGVKYS 422
            L+ LKHRLAAGA+LPN+T+LLP+EKT+  S+ G  RT+N+AGR+GQA+ SLLRRL + Y 
Sbjct: 1043 LRGLKHRLAAGAKLPNVTILLPLEKTKFMSNKG-NRTINLAGRIGQAIASLLRRLRLTYQ 1101

Query: 421  GDESYGKIRINGLALRRWFKPKLSGFSVSGRPGDMASISTRLAKGISDQQRDIRSTNNLS 242
            G+ESYGKIRINGLAL+RWF+PKL     SG+P +++S  TRL KGISDQQR IRS + LS
Sbjct: 1102 GNESYGKIRINGLALKRWFQPKLDS-PFSGKPAELSSSPTRLGKGISDQQRSIRS-SKLS 1159

Query: 241  LE 236
            LE
Sbjct: 1160 LE 1161


>ref|XP_010255161.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X2 [Nelumbo nucifera]
          Length = 1133

 Score = 1093 bits (2826), Expect = 0.0
 Identities = 623/1135 (54%), Positives = 776/1135 (68%), Gaps = 33/1135 (2%)
 Frame = -1

Query: 3541 MDVSITSKAQ--TLASSVPLSSQFHLPSS----------IRREFLGCGTHLRPAGLRSRT 3398
            MDV++++KAQ  TL S   +SS +   SS          +RREFLG    LR  G RSR 
Sbjct: 36   MDVNLSAKAQNLTLISCFTISSSYSSSSSSSTSSPRFCSLRREFLGSCDRLRFPGARSRR 95

Query: 3397 TKRKIGLRIHSPRCLLHNPLDENILXXXXXXATFATLQLIYINYSRWRRDAPKFSDDQKG 3218
              +K+G  I SPR L    L           ATF+ L ++Y  ++R ++DA + S  Q  
Sbjct: 96   KCKKLGFLIQSPRLLPRASLYSKPFLVIVAIATFSALTVVYSVHTRRKKDAQESSGTQDP 155

Query: 3217 DGMVGSELCEQDEDILEYEAVGNPLLSGEGLHI-KPCEIENAFERIYQNMDYEKVHDSDA 3041
            D      L +Q  D    ++V N +L  E +    P E     + I++    EK H++  
Sbjct: 156  DEFQNLALSKQSRDFTN-QSVDNQILDLEKISDGTPAE---ELKAIFEETS-EKGHNNLE 210

Query: 3040 KDAKQLEFQKAVLAWEDNSVNEVQTGYELAYS---PRESELIK-TNGCTGSSSTPVLVNE 2873
            K+ +  +F+K  L +E++   E     EL+YS    + S L K T     + S+PVL  E
Sbjct: 211  KEVQLSQFKKTALMFEESPFTEAS---ELSYSVCSTKSSILTKETESMDPTLSSPVL-GE 266

Query: 2872 VKTVDGGALAAKMPNLLSE--KEEDIAVSSCSVISAEKKSGESNQNNYELGHIATKHS-- 2705
              + +    A  MP L+ +  +EE +  S  S +  + KS       +    ++ +H   
Sbjct: 267  SASGEKVRFAKDMPELVLKGYQEEAVPWSELSGLLVDPKSSSVIHLKHVPAEVSQEHQFK 326

Query: 2704 -------DVLISSYDGYLREP-DEEVSNCNDEKQPXXXXXXXXXXXXXXSHHFDDNTVCY 2549
                   +V +S+Y+G+ R    EE+    +E Q                 H   NT  Y
Sbjct: 327  NELDDEGEVQVSTYNGFFRPSFREEIHTFYEENQSGVRTNMLSGAEVSEGLH---NTTDY 383

Query: 2548 SHLKTALPDADILAKGSPPTAETLIGSLKESPLSKEDELIKGQGFTRDIGKTLVHKSNNG 2369
               K  L                     KE    +  +   G+GF RD GK L  +  NG
Sbjct: 384  HERKMPL------------------SCYKEGSCHRRKDFRIGKGFPRDTGKKLTPQ--NG 423

Query: 2368 DFS-SFPQQNGFRRHV---NGPAXXXXXXXXXXXXXXXXDCVDVLERMERKGLLDMDKVH 2201
            D +   PQ NG   HV   N  +                DCV++LE +ERKGLLDM+KV+
Sbjct: 424  DRNLHHPQPNGL--HVSDRNDISGSIDAYNRLLSDGRVTDCVELLEDLERKGLLDMNKVY 481

Query: 2200 HATFLKACKSQKAVKEAFQFCKLIPNPTLSTFNMLLSVCASSQDFDGAFQAMLIIKEAGL 2021
            HA F   CKSQKAV EAF+F KLI NPT+STFNMLLSVCAS QD DGAFQ +  +KEAGL
Sbjct: 482  HAKFFNTCKSQKAVNEAFRFIKLISNPTMSTFNMLLSVCASCQDSDGAFQVLQFVKEAGL 541

Query: 2020 KPDCKLYTTLISTCAKCGKVDAMFEVFHEMVNAGVEPNVNTYGALIDGCARAGQVAKAFG 1841
            K DCKLYTTLISTCAK GKVDAMFEVFHEMVNAGVEPNV+TYGALIDGCARAGQVAKAFG
Sbjct: 542  KADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCARAGQVAKAFG 601

Query: 1840 AYGIMRSKKVQPDRVIFNALITACGQSGAVDRAFDVLAEMRAEPKPIDPDHVTIGALIKT 1661
            AYGIMRSKKV+PDRV+FNALITACGQSGAVDRAFDVLAEMR E +PIDPDHVT+GALIKT
Sbjct: 602  AYGIMRSKKVKPDRVVFNALITACGQSGAVDRAFDVLAEMRTENQPIDPDHVTVGALIKT 661

Query: 1660 CIQAGQVDRVPEVYRMLHMYNIRGTPEVYTIAVNSCSQTGDLEFALSIYNDMKKNAIVPD 1481
            C QAGQVDR  EVY M+H YNI+GTP+VYTIAVNSCSQTGDL+FAL+IY+DM++N +VPD
Sbjct: 662  CTQAGQVDRAREVYMMIHEYNIKGTPDVYTIAVNSCSQTGDLDFALNIYSDMRRNGVVPD 721

Query: 1480 EMFLSTLIDVAGHAGKVDTGFEILKNARSKGIRLGNVSYSSLMGACCNAKNWQKALELFE 1301
            EMFLS LIDVAGHAGK+D  F+I+++A+ +G++LGNVSYSSLMGAC NAKNWQKA EL+E
Sbjct: 722  EMFLSALIDVAGHAGKLDVAFQIIEDAKKQGMQLGNVSYSSLMGACSNAKNWQKAQELYE 781

Query: 1300 EIKAIKLLPTVSTLNALITSLCDGDQLLKSVEVLDEIKEAGVQPNIITYSILIVACEKKD 1121
             I AIKL PTVS +NALITSLC+G+QL K+V+VLDE+KE G+ P  ITYSIL+VACEKKD
Sbjct: 782  NIMAIKLHPTVSMMNALITSLCEGNQLQKAVKVLDEMKEIGICPENITYSILLVACEKKD 841

Query: 1120 EAELGFTLFSKAKKDGILPNLIICRCLTGLCLKSLEKAYSLCEPIVTFNSGKPQIDSKWT 941
            E ELGFTL S+AKK+GI+PNLI+CRCLTG+CL+  EK+ S+ EP+++F+SGKPQ+++KWT
Sbjct: 842  ELELGFTLLSEAKKEGIVPNLIMCRCLTGMCLRRFEKSSSMGEPVLSFSSGKPQVNNKWT 901

Query: 940  SRAIMVYRETISAGVIPTIEVFSQVLGCLQFPHDSSLRNRFVENLDLHIDASKCSNICSL 761
            S A+MVYRETI AGV+PT+EVFSQVLGCLQ P D+SLR R VENL ++  +SK S+I SL
Sbjct: 902  SLALMVYRETIVAGVVPTMEVFSQVLGCLQLPRDTSLRERLVENLGVNTSSSKHSSIYSL 961

Query: 760  LDGFGEYDTRCFSVFEEAASLGVVPRISFKDNPIVVDARKLLTHTVEVYLLTILKALKHR 581
            +DGFGEYD+R FS+ EEAASLGVVP +SFK++PIVVD RKL  HT EVY LTIL+ LKHR
Sbjct: 962  IDGFGEYDSRSFSLLEEAASLGVVPCVSFKESPIVVDTRKLDVHTAEVYFLTILRGLKHR 1021

Query: 580  LAAGARLPNITVLLPIEKTQIESSSGERRTVNIAGRVGQAVGSLLRRLGVKYSGDESYGK 401
            LAAGA+LPN+T+LLP+EKT+  S+ G  RT+N+AGR+GQA+ SLLRRL + Y G+ESYGK
Sbjct: 1022 LAAGAKLPNVTILLPLEKTKFMSNKG-NRTINLAGRIGQAIASLLRRLRLTYQGNESYGK 1080

Query: 400  IRINGLALRRWFKPKLSGFSVSGRPGDMASISTRLAKGISDQQRDIRSTNNLSLE 236
            IRINGLAL+RWF+PKL     SG+P +++S  TRL KGISDQQR IRS + LSLE
Sbjct: 1081 IRINGLALKRWFQPKLDS-PFSGKPAELSSSPTRLGKGISDQQRSIRS-SKLSLE 1133


>ref|XP_009413750.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic [Musa acuminata subsp. malaccensis]
          Length = 1014

 Score = 1080 bits (2794), Expect = 0.0
 Identities = 548/783 (69%), Positives = 636/783 (81%), Gaps = 6/783 (0%)
 Frame = -1

Query: 2566 DNTVCYSHLKTALPDADILAKGSPPTAETL-----IGSLKESPLSKEDELIKGQGFTRDI 2402
            +N    S L   L   D LAKGS  TA+       +   KE+   +E  L     F +DI
Sbjct: 234  ENNGSCSQLMLDLRYQDALAKGSFLTADPTKQQPPMSCFKEASKREEKVLRNVHEFAKDI 293

Query: 2401 GKTLVHKSNNGDFSSFPQ-QNGFRRHVNGPAXXXXXXXXXXXXXXXXDCVDVLERMERKG 2225
            G+ +  K  +   S  PQ +  F +  N  +                +C+D LE MERKG
Sbjct: 294  GRNMRCKKGDTILSRLPQPKRNFEKSTNDLSSWLRTYNRLLRDGRLAECIDFLESMERKG 353

Query: 2224 LLDMDKVHHATFLKACKSQKAVKEAFQFCKLIPNPTLSTFNMLLSVCASSQDFDGAFQAM 2045
            LLDMDKVHH +FLKACK++KAVKEAFQFCKLI NPT+STFNMLLSVCASSQDF+GAFQ M
Sbjct: 354  LLDMDKVHHMSFLKACKNKKAVKEAFQFCKLIQNPTMSTFNMLLSVCASSQDFEGAFQVM 413

Query: 2044 LIIKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVNAGVEPNVNTYGALIDGCARA 1865
            L+IKE  LKPDCKLYTTLISTCAK GKVDAMFEVFHEMVNAG+EPN NTYGALIDGCARA
Sbjct: 414  LLIKEDALKPDCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGIEPNANTYGALIDGCARA 473

Query: 1864 GQVAKAFGAYGIMRSKKVQPDRVIFNALITACGQSGAVDRAFDVLAEMRAEPKPIDPDHV 1685
            GQVAKAFGAYGIMRSKKVQPDRV+FNALITACG+ GAVDRAFDVLAEM+AEPKPIDPDHV
Sbjct: 474  GQVAKAFGAYGIMRSKKVQPDRVVFNALITACGEVGAVDRAFDVLAEMKAEPKPIDPDHV 533

Query: 1684 TIGALIKTCIQAGQVDRVPEVYRMLHMYNIRGTPEVYTIAVNSCSQTGDLEFALSIYNDM 1505
            T+GALIK C ++GQV+R  EVY+ML  Y+I GTPEVYTIA  SCSQ GD +FAL IY+DM
Sbjct: 534  TVGALIKACSKSGQVERTREVYKMLQEYHITGTPEVYTIAAKSCSQIGDFQFALEIYDDM 593

Query: 1504 KKNAIVPDEMFLSTLIDVAGHAGKVDTGFEILKNARSKGIRLGNVSYSSLMGACCNAKNW 1325
            K+N ++PDEMFLST+IDVAGHAGK++  F+IL+ A+S GI++GN+SYSSLMGACCNAK+W
Sbjct: 594  KRNGVIPDEMFLSTIIDVAGHAGKINAAFKILQEAKSDGIKVGNMSYSSLMGACCNAKDW 653

Query: 1324 QKALELFEEIKAIKLLPTVSTLNALITSLCDGDQLLKSVEVLDEIKEAGVQPNIITYSIL 1145
            +KALEL+EEIKAIKLLPTVS LNALITSLC+ DQ+LKSVEVLDE+K+ GVQPN ITYS+L
Sbjct: 654  KKALELYEEIKAIKLLPTVSLLNALITSLCEADQVLKSVEVLDEMKKKGVQPNEITYSVL 713

Query: 1144 IVACEKKDEAELGFTLFSKAKKDGILPNLIICRCLTGLCLKSLEKAYSLCEPIVTFNSGK 965
            IVACE+  EAEL FTLF +AK+D +LPN+I+CRCLTGLCL S +KAYSL EPIV+FN+G+
Sbjct: 714  IVACERNGEAELAFTLFGEAKRDRVLPNIIMCRCLTGLCLYSFKKAYSLGEPIVSFNTGR 773

Query: 964  PQIDSKWTSRAIMVYRETISAGVIPTIEVFSQVLGCLQFPHDSSLRNRFVENLDLHIDAS 785
            PQ+DSKWTS AIMVYRETI AGVIPTIEVFSQVLGCLQFP DSSLR  F+ENL +  D+S
Sbjct: 774  PQVDSKWTSLAIMVYRETIQAGVIPTIEVFSQVLGCLQFPRDSSLRKTFIENLGIGFDSS 833

Query: 784  KCSNICSLLDGFGEYDTRCFSVFEEAASLGVVPRISFKDNPIVVDARKLLTHTVEVYLLT 605
            + SN+ SLLDGFGEYD R FS+ EEA SLGV+PR + KDNP VVDARKL  HT EVYLLT
Sbjct: 834  RSSNVSSLLDGFGEYDIRSFSILEEATSLGVIPRATMKDNP-VVDARKLQIHTAEVYLLT 892

Query: 604  ILKALKHRLAAGARLPNITVLLPIEKTQIESSSGERRTVNIAGRVGQAVGSLLRRLGVKY 425
            ILK LK+RLAAG+RLPNIT+LLP E+TQIE S G+ RT+++AGRVGQAVGSLLRRLG+ Y
Sbjct: 893  ILKGLKYRLAAGSRLPNITILLPTERTQIEFSKGD-RTISLAGRVGQAVGSLLRRLGLPY 951

Query: 424  SGDESYGKIRINGLALRRWFKPKLSGFSVSGRPGDMASISTRLAKGISDQQRDIRSTNNL 245
             G+ESYGKIRINGLALRRWFKP+++  S SGRP +M   + RLAKGI+DQQR IR + N 
Sbjct: 952  QGEESYGKIRINGLALRRWFKPRVTSTSFSGRPAEMIPTTARLAKGIADQQRSIRISKNF 1011

Query: 244  SLE 236
            SLE
Sbjct: 1012 SLE 1014



 Score = 95.1 bits (235), Expect = 4e-16
 Identities = 63/141 (44%), Positives = 78/141 (55%), Gaps = 4/141 (2%)
 Frame = -1

Query: 3541 MDVSITSKAQTLASSVPLS-SQFHLPSSIRREFLGCGTHLR-PAGLRSRTTKRKIGLRIH 3368
            MDV+ T K Q    SV L  S   LP S RREFLGCG+HLR P+GLRS    +K GL+ H
Sbjct: 1    MDVAFTPKPQRPICSVYLPFSPGLLPLSTRREFLGCGSHLRPPSGLRSLKRFKKSGLQFH 60

Query: 3367 SPRCLLHN-PLDENILXXXXXXATFATLQLIYINYSRWRR-DAPKFSDDQKGDGMVGSEL 3194
            SPRCL      ++++L      A F   Q IY+N+ R RR ++PKFS  Q  D  VGS  
Sbjct: 61   SPRCLSQEFSYEDSVLTAAAVVAAFTAFQFIYLNHKRKRRSESPKFSGLQVSDVTVGSGP 120

Query: 3193 CEQDEDILEYEAVGNPLLSGE 3131
            CEQD      E      + G+
Sbjct: 121  CEQDAISRSKEGAAKEFMIGQ 141


>ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic [Vitis vinifera]
          Length = 1115

 Score = 1026 bits (2654), Expect = 0.0
 Identities = 581/1141 (50%), Positives = 757/1141 (66%), Gaps = 39/1141 (3%)
 Frame = -1

Query: 3541 MDVSITSKAQ--TLASSVPL------SSQFHLPSSIRREFLGCGTHLRPAGLRSRTTKRK 3386
            MDV+ ++K+Q  TL S  PL      SS F   S++RREFLGCG +LRP GLRS    + 
Sbjct: 1    MDVNFSAKSQALTLISCTPLYSSPSPSSSF---STLRREFLGCGHNLRPPGLRSPKKCKN 57

Query: 3385 IGLRIHSP-RCLLHNPLDENILXXXXXXATFATLQLIYINYSRWRRDAPKFSDDQKGDGM 3209
            I  RI SP R      L    +      A      +++++YSR R+++ + S      G 
Sbjct: 58   IRFRIQSPSRFYFKASLGSQPVLVVVAVAAVFAFSVVFLSYSRRRKNSREVS------GP 111

Query: 3208 VGSELCEQDEDILEYEAVGNPLLSGEGLHIKPCEIENAFERIYQNMDYEKVHDSDAKDAK 3029
             G  + +   D++  + + + +L    LH +  E E+   R   ++  E  H S  K+A 
Sbjct: 112  SGFAISQLSRDVMN-QFMESAILGFGDLHKETSEKES---RATMDIVEEVSHASKDKEAP 167

Query: 3028 QLEFQKAVLAWEDNSVNEVQTGYEL---AYSPRESELIKTNGCTGSSSTPVLVNEVKTVD 2858
               +Q+  L  E+  V        L   + + +    ++     G S  P L++E   + 
Sbjct: 168  ---WQEIALMQEETHVTNTSESSRLDVLSSNAKNCVSVRETEEAGPSILPPLLSESGLLQ 224

Query: 2857 GGALAAKMPNLLSEKEE-----------------DIAVSSCSVISAEKKSGESNQNNYEL 2729
                A +MP L  E+ +                  IA S   +I+ E  +   N+     
Sbjct: 225  PLVFATEMPELQLEERQMETEFGYDLSTPVVQTKSIAASVPDIIALEGVNERKNR----- 279

Query: 2728 GHIATKHSDVLISSYDGYLREP-DEEVSNCNDEKQPXXXXXXXXXXXXXXSHH---FDDN 2561
            G    + S+++  S+ G  R+   EE+    + KQ               + +    D N
Sbjct: 280  GGRPGEESEII--SFTGIFRDTIREELYTFYEAKQSVMKPMPNFNGIKTLASNASLLDGN 337

Query: 2560 TVCYSHLKTALPDADILAKGSPPTAETLIGSL-----KESPLSKEDELIKGQGFTRDIGK 2396
             V +        +A++ A+ S  +A+ + G +     KE    K ++L+KG+GF RD   
Sbjct: 338  GVSFQMRNATSKEAELSAQNSHSSADYVEGKMSLSCYKEGSSGKRNDLVKGKGFPRDKNG 397

Query: 2395 TLVHKSNNGDFSSFPQQNGFR-RHVNGPAXXXXXXXXXXXXXXXXDCVDVLERMERKGLL 2219
             L   S++ + S FP  NG   +     +                DC+ +LE ME+ GLL
Sbjct: 398  RLPPLSDHRNLSQFPLSNGMTVKEKYHDSEKFSAYNRLLSEGRLSDCIQLLEDMEKMGLL 457

Query: 2218 DMDKVHHATFLKACKSQKAVKEAFQFCKLIPNPTLSTFNMLLSVCASSQDFDGAFQAMLI 2039
            DMDKV+HA F K C+SQKAV EAF+F KLIP PTLSTFNML+SVCA+SQD  GAFQ + +
Sbjct: 458  DMDKVYHAKFFKICRSQKAVTEAFRFAKLIPTPTLSTFNMLMSVCATSQDSAGAFQVLQL 517

Query: 2038 IKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVNAGVEPNVNTYGALIDGCARAGQ 1859
            ++EAGLK DCKLYTTLISTCAK GKVDAMFEVFHEMVNA VEPNV+TYGALIDGC RAGQ
Sbjct: 518  VREAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAEVEPNVHTYGALIDGCGRAGQ 577

Query: 1858 VAKAFGAYGIMRSKKVQPDRVIFNALITACGQSGAVDRAFDVLAEMRAEPKPIDPDHVTI 1679
            VAKAFGAYGIMRSKKV+PDRV+FNALITACGQSGAVDRAFDVLAEMRAE +PIDPDH+T+
Sbjct: 578  VAKAFGAYGIMRSKKVEPDRVVFNALITACGQSGAVDRAFDVLAEMRAETQPIDPDHITV 637

Query: 1678 GALIKTCIQAGQVDRVPEVYRMLHMYNIRGTPEVYTIAVNSCSQTGDLEFALSIYNDMKK 1499
            GALIK C  AGQVDR  EVY+M+  YNI+GTPEVYTIAV+S SQ GD EFA S+Y DM +
Sbjct: 638  GALIKACTNAGQVDRAREVYKMIDQYNIKGTPEVYTIAVSSHSQIGDWEFAYSVYTDMTR 697

Query: 1498 NAIVPDEMFLSTLIDVAGHAGKVDTGFEILKNARSKGIRLGNVSYSSLMGACCNAKNWQK 1319
              +VPDEMFLS LIDVAGHAGK+D  FE+++ AR +GI LG VSYSSLMGAC NAKNWQK
Sbjct: 698  KGVVPDEMFLSALIDVAGHAGKLDAAFEVIQEARIQGIPLGIVSYSSLMGACSNAKNWQK 757

Query: 1318 ALELFEEIKAIKLLPTVSTLNALITSLCDGDQLLKSVEVLDEIKEAGVQPNIITYSILIV 1139
            ALEL+ +IK++KL PTVST+NALIT+LC+G+QL K++EVL ++K AG+ PN ITYSIL+V
Sbjct: 758  ALELYVDIKSMKLNPTVSTMNALITALCEGEQLEKAMEVLSDMKRAGLCPNTITYSILLV 817

Query: 1138 ACEKKDEAELGFTLFSKAKKDGILPNLIICRCLTGLCLKSLEKAYSLCEPIVTFNSGKPQ 959
            A EKKD+ ++G  + S+A+KD + PNL++CRCL G+CL+  EKA +L EP+++FNSG+PQ
Sbjct: 818  ASEKKDDIDVGLMILSQARKDSVAPNLVMCRCLVGMCLRRFEKACALGEPVLSFNSGRPQ 877

Query: 958  IDSKWTSRAIMVYRETISAGVIPTIEVFSQVLGCLQFPHDSSLRNRFVENLDLHIDASKC 779
            ID+KWTS A+MVYRET+SAGVIPT+E+ SQVLGCLQFP D SLRNR +ENL +  DAS+ 
Sbjct: 878  IDNKWTSSALMVYRETVSAGVIPTMELLSQVLGCLQFPRDVSLRNRLIENLGVSADASRR 937

Query: 778  SNICSLLDGFGEYDTRCFSVFEEAASLGVVPRISFKDNPIVVDARKLLTHTVEVYLLTIL 599
            SN+CSL+DGFGEYD+R FS+ EEAASLGVV  +SFK +P++VD R+L     EVYLLT+L
Sbjct: 938  SNLCSLIDGFGEYDSRAFSLLEEAASLGVVSCVSFKKSPVIVDTRRLQIRIAEVYLLTVL 997

Query: 598  KALKHRLAAGARLPNITVLLPIEKTQIESSSGERRTVNIAGRVGQAVGSLLRRLGVKYSG 419
            K LKHRLAAGA+LP++T+LLP E TQ+ +  GE + +N+AGR+ QAV S+LRRLG+ Y G
Sbjct: 998  KGLKHRLAAGAKLPSMTILLPTETTQVLAPKGE-KAINLAGRISQAVASMLRRLGLPYQG 1056

Query: 418  DESYGKIRINGLALRRWFKPKLSGFSVSGRPGDMASISTRLAKGISDQQRDIRSTNNLSL 239
            +ES GKIRINGLA RRWF+PKL+G   SG+  +++S  +RL  GIS QQR IR T NLSL
Sbjct: 1057 NESRGKIRINGLATRRWFQPKLAG-PFSGKVDELSSSQSRLGTGISLQQRKIR-TGNLSL 1114

Query: 238  E 236
            +
Sbjct: 1115 D 1115


>emb|CBI37948.3| unnamed protein product [Vitis vinifera]
          Length = 1550

 Score =  988 bits (2553), Expect = 0.0
 Identities = 544/1046 (52%), Positives = 711/1046 (67%), Gaps = 30/1046 (2%)
 Frame = -1

Query: 3283 LIYINYSRWRRDAPKFSDDQKGDGMVGSELCEQDEDILEYEAVGNPLLSGEGLHIKPCEI 3104
            +++++YSR R+++ + S      G  G  + +   D++  + + + +L    LH +  E 
Sbjct: 528  VVFLSYSRRRKNSREVS------GPSGFAISQLSRDVMN-QFMESAILGFGDLHKETSEK 580

Query: 3103 ENAFERIYQNMDYEKVHDSDAKDAKQLEFQKAVLAWEDNSVNEVQTGYEL---AYSPRES 2933
            E+   R   ++  E  H S  K+A    +Q+  L  E+  V        L   + + +  
Sbjct: 581  ES---RATMDIVEEVSHASKDKEAP---WQEIALMQEETHVTNTSESSRLDVLSSNAKNC 634

Query: 2932 ELIKTNGCTGSSSTPVLVNEVKTVDGGALAAKMPNLLSEKEE-----------------D 2804
              ++     G S  P L++E   +     A +MP L  E+ +                  
Sbjct: 635  VSVRETEEAGPSILPPLLSESGLLQPLVFATEMPELQLEERQMETEFGYDLSTPVVQTKS 694

Query: 2803 IAVSSCSVISAEKKSGESNQNNYELGHIATKHSDVLISSYDGYLREP-DEEVSNCNDEKQ 2627
            IA S   +I+ E  +   N+     G    + S+++  S+ G  R+   EE+    + KQ
Sbjct: 695  IAASVPDIIALEGVNERKNR-----GGRPGEESEII--SFTGIFRDTIREELYTFYEAKQ 747

Query: 2626 PXXXXXXXXXXXXXXSHH---FDDNTVCYSHLKTALPDADILAKGSPPTAETLIGSL--- 2465
                           + +    D N V +        +A++ A+ S  +A+ + G +   
Sbjct: 748  SVMKPMPNFNGIKTLASNASLLDGNGVSFQMRNATSKEAELSAQNSHSSADYVEGKMSLS 807

Query: 2464 --KESPLSKEDELIKGQGFTRDIGKTLVHKSNNGDFSSFPQQNGFR-RHVNGPAXXXXXX 2294
              KE    K ++L+KG+GF RD    L   S++ + S FP  NG   +     +      
Sbjct: 808  CYKEGSSGKRNDLVKGKGFPRDKNGRLPPLSDHRNLSQFPLSNGMTVKEKYHDSEKFSAY 867

Query: 2293 XXXXXXXXXXDCVDVLERMERKGLLDMDKVHHATFLKACKSQKAVKEAFQFCKLIPNPTL 2114
                      DC+ +LE ME+ GLLDMDKV+HA F K C+SQKAV EAF+F KLIP PTL
Sbjct: 868  NRLLSEGRLSDCIQLLEDMEKMGLLDMDKVYHAKFFKICRSQKAVTEAFRFAKLIPTPTL 927

Query: 2113 STFNMLLSVCASSQDFDGAFQAMLIIKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHE 1934
            STFNML+SVCA+SQD  GAFQ + +++EAGLK DCKLYTTLISTCAK GKVDAMFEVFHE
Sbjct: 928  STFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTLISTCAKSGKVDAMFEVFHE 987

Query: 1933 MVNAGVEPNVNTYGALIDGCARAGQVAKAFGAYGIMRSKKVQPDRVIFNALITACGQSGA 1754
            MVNA VEPNV+TYGALIDGC RAGQVAKAFGAYGIMRSKKV+PDRV+FNALITACGQSGA
Sbjct: 988  MVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQSGA 1047

Query: 1753 VDRAFDVLAEMRAEPKPIDPDHVTIGALIKTCIQAGQVDRVPEVYRMLHMYNIRGTPEVY 1574
            VDRAFDVLAEMRAE +PIDPDH+T+GALIK C  AGQVDR  EVY+M+  YNI+GTPEVY
Sbjct: 1048 VDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYKMIDQYNIKGTPEVY 1107

Query: 1573 TIAVNSCSQTGDLEFALSIYNDMKKNAIVPDEMFLSTLIDVAGHAGKVDTGFEILKNARS 1394
            TIAV+S SQ GD EFA S+Y DM +  +VPDEMFLS LIDVAGHAGK+D  FE+++ AR 
Sbjct: 1108 TIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQEARI 1167

Query: 1393 KGIRLGNVSYSSLMGACCNAKNWQKALELFEEIKAIKLLPTVSTLNALITSLCDGDQLLK 1214
            +GI LG VSYSSLMGAC NAKNWQKALEL+ +IK++KL PTVST+NALIT+LC+G+QL K
Sbjct: 1168 QGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPTVSTMNALITALCEGEQLEK 1227

Query: 1213 SVEVLDEIKEAGVQPNIITYSILIVACEKKDEAELGFTLFSKAKKDGILPNLIICRCLTG 1034
            ++EVL ++K AG+ PN ITYSIL+VA EKKD+ ++G  + S+A+KD + PNL++CRCL G
Sbjct: 1228 AMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILSQARKDSVAPNLVMCRCLVG 1287

Query: 1033 LCLKSLEKAYSLCEPIVTFNSGKPQIDSKWTSRAIMVYRETISAGVIPTIEVFSQVLGCL 854
            +CL+  EKA +L EP+++FNSG+PQID+KWTS A+MVYRET+SAGVIPT+E+ SQVLGCL
Sbjct: 1288 MCLRRFEKACALGEPVLSFNSGRPQIDNKWTSSALMVYRETVSAGVIPTMELLSQVLGCL 1347

Query: 853  QFPHDSSLRNRFVENLDLHIDASKCSNICSLLDGFGEYDTRCFSVFEEAASLGVVPRISF 674
            QFP D SLRNR +ENL +  DAS+ SN+CSL+DGFGEYD+R FS+ EEAASLGVV  +SF
Sbjct: 1348 QFPRDVSLRNRLIENLGVSADASRRSNLCSLIDGFGEYDSRAFSLLEEAASLGVVSCVSF 1407

Query: 673  KDNPIVVDARKLLTHTVEVYLLTILKALKHRLAAGARLPNITVLLPIEKTQIESSSGERR 494
            K +P++VD R+L     EVYLLT+LK LKHRLAAGA+LP++T+LLP E TQ+ +  GE +
Sbjct: 1408 KKSPVIVDTRRLQIRIAEVYLLTVLKGLKHRLAAGAKLPSMTILLPTETTQVLAPKGE-K 1466

Query: 493  TVNIAGRVGQAVGSLLRRLGVKYSGDESYGKIRINGLALRRWFKPKLSGFSVSGRPGDMA 314
             +N+AGR+ QAV S+LRRLG+ Y G+ES GKIRINGLA RRWF+PKL+G   SG+  +++
Sbjct: 1467 AINLAGRISQAVASMLRRLGLPYQGNESRGKIRINGLATRRWFQPKLAG-PFSGKVDELS 1525

Query: 313  SISTRLAKGISDQQRDIRSTNNLSLE 236
            S  +RL  GIS QQR IR T NLSL+
Sbjct: 1526 SSQSRLGTGISLQQRKIR-TGNLSLD 1550


>ref|XP_007041957.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
            cacao] gi|508705892|gb|EOX97788.1| Pentatricopeptide
            repeat-containing protein, putative [Theobroma cacao]
          Length = 1110

 Score =  981 bits (2535), Expect = 0.0
 Identities = 565/1127 (50%), Positives = 746/1127 (66%), Gaps = 27/1127 (2%)
 Frame = -1

Query: 3535 VSITSKAQTLAS--SVPLSSQFHLPSSIRREFLGCGTHLRPAGLRSRTTKRK--IG-LRI 3371
            V  +SK QT     S PL S  + P  I R+FLG    LRP G  S   K+   +G LR+
Sbjct: 6    VFFSSKFQTPTRPPSSPLRSCTNRPL-ISRQFLGFNHTLRPPGGASSLRKKNKTLGFLRL 64

Query: 3370 HSPRCLLHNPLDENILXXXXXXATFATLQLIYINYSRWRRDAPKFSDDQKGDGMVGSELC 3191
            HSPR ++   +D N++         + L L    Y+R+ R   K    +   G   S L 
Sbjct: 65   HSPRFIVRASIDSNLVLVVIGVTALSALSLAC--YNRFFR---KIGSSKTVSGSSHSALP 119

Query: 3190 EQ--DEDILEYEAVGNPLLSGEGLHIKPCEIENAFERIYQNMDYEKVHDSDAKDAKQLEF 3017
            +Q   +D     A    L  G+   +K        + + + +  E  + S++K+A  L+F
Sbjct: 120  QQRLGKDGAVQTAESQVLDIGD---LKKENFAKGKDDLKEEIK-EATYASESKEAL-LQF 174

Query: 3016 QKAVLAWEDNSVNEVQ--TGYE-LAYSPRESELIKTNGCTGSSSTPVLVNEVKTVDGGAL 2846
            Q+  +A +D+ +++    +G + LA +    ++ + +G T     P ++ E   V+    
Sbjct: 175  QETTVANDDSLLHKTSDSSGADCLAVTANGFDVSEESGATDLPLPPTVLLESGAVEPLMF 234

Query: 2845 AAKMPNLLSEKEEDIAVSSCSV--ISAEKKSGESNQNNYELGHIATKHSDVLISS----- 2687
            AA+M  L  E+ E +      +  ++ E +S  S+        +  K + VL+       
Sbjct: 235  AAEMSELHLEEVERVNEFEADLPRLAVEPESSASS--------VLVKDAHVLVGEGEVTR 286

Query: 2686 -YDGYLREPDEEVSNCNDEKQPXXXXXXXXXXXXXXSHH-FDDNTVCYSHL--KTALPDA 2519
             YD +     EE+    +  Q               S   F  N+  +S L   + L  A
Sbjct: 287  HYDIFKESVREELHTFYEADQLVAKSSTNLNGLKPASSRVFSPNSNSFSSLMQNSELKRA 346

Query: 2518 DILAKGSPPTAETLIGSLKESPLS-----KEDELIKGQGFTRDIGKTLVHKSNNGDFSSF 2354
             + +K    TA+   G + ++  +     K  +  +G+   RD GK    +  N     F
Sbjct: 347  QLSSKNCLQTADMAEGKVAQACSNRVSSHKRQDFGRGREIPRDKGKRHSIQEKNTKLPKF 406

Query: 2353 PQQNGFRR-HVNGPAXXXXXXXXXXXXXXXXDCVDVLERMERKGLLDMDKVHHATFLKAC 2177
            P  NG    + + P                 DCVD+LE ME++GLLDM+KV+HA F K C
Sbjct: 407  PFPNGMLADNKHRPEDHFRSYNRLLRDGRLSDCVDLLEDMEQRGLLDMNKVYHAKFFKIC 466

Query: 2176 KSQKAVKEAFQFCKLIPNPTLSTFNMLLSVCASSQDFDGAFQAMLIIKEAGLKPDCKLYT 1997
              QKAVKEAF F KLIPNPTLSTFNML+SVCASSQD DGAF+ + I++EAG K DCKLYT
Sbjct: 467  NRQKAVKEAFCFTKLIPNPTLSTFNMLMSVCASSQDSDGAFEVLRIVQEAGFKADCKLYT 526

Query: 1996 TLISTCAKCGKVDAMFEVFHEMVNAGVEPNVNTYGALIDGCARAGQVAKAFGAYGIMRSK 1817
            TLISTCAK GKVD MFEVFHEMVN+GVEPNVNTYGALIDGCARAGQVAKAFGAYGIMRSK
Sbjct: 527  TLISTCAKSGKVDTMFEVFHEMVNSGVEPNVNTYGALIDGCARAGQVAKAFGAYGIMRSK 586

Query: 1816 KVQPDRVIFNALITACGQSGAVDRAFDVLAEMRAEPKPIDPDHVTIGALIKTCIQAGQVD 1637
             V+PDRV+FNALITACGQSGAVDRAFDVLAEM AE +PIDPDHVT+GALIK C  A QVD
Sbjct: 587  NVKPDRVVFNALITACGQSGAVDRAFDVLAEMMAETQPIDPDHVTVGALIKACSNADQVD 646

Query: 1636 RVPEVYRMLHMYNIRGTPEVYTIAVNSCSQTGDLEFALSIYNDMKKNAIVPDEMFLSTLI 1457
            R  EVY+M+H ++I+GTPEVYTIAVN CSQTGD EFA S+Y+DMK   + PDE+F+S LI
Sbjct: 647  RAREVYKMIHEFSIKGTPEVYTIAVNCCSQTGDWEFACSVYSDMKGKGVAPDEVFISALI 706

Query: 1456 DVAGHAGKVDTGFEILKNARSKGIRLGNVSYSSLMGACCNAKNWQKALELFEEIKAIKLL 1277
            DVAGHAGK+D  FEIL+ A+++GI +G VSYSSLMGAC NA+NWQKALEL+E IKA+KL 
Sbjct: 707  DVAGHAGKLDAAFEILEEAKNQGINVGIVSYSSLMGACSNARNWQKALELYENIKAVKLN 766

Query: 1276 PTVSTLNALITSLCDGDQLLKSVEVLDEIKEAGVQPNIITYSILIVACEKKDEAELGFTL 1097
             TVST+NALITSLC+ DQL K++E+L E++E G+ PN +TYSIL+VA E+KD+ E+G  L
Sbjct: 767  LTVSTVNALITSLCEADQLPKAMEILSEMEELGLCPNTVTYSILLVASERKDDLEVGLML 826

Query: 1096 FSKAKKDGILPNLIICRCLTGLCLKSLEKAYSLCEPIVTFNSGKPQIDSKWTSRAIMVYR 917
             S+A+KDG+ PNLI+ RC+ G+CL+  EKA  + EP+++FNSG+P I++KWTS A+ VYR
Sbjct: 827  LSQARKDGVAPNLIMARCIIGMCLRRFEKACKVGEPVLSFNSGQPHIENKWTSVALAVYR 886

Query: 916  ETISAGVIPTIEVFSQVLGCLQFPHDSSLRNRFVENLDLHIDASKCSNICSLLDGFGEYD 737
            ETI AG  PT++V SQ+LGCLQ P D SL++R VENLD+  DA++CS++ SL+DGFGEYD
Sbjct: 887  ETIVAGTAPTMDVISQILGCLQLPRDDSLKSRLVENLDVSADATRCSSLSSLIDGFGEYD 946

Query: 736  TRCFSVFEEAASLGVVPRISFKDNPIVVDARKLLTHTVEVYLLTILKALKHRLAAGARLP 557
             R FS+ EEAAS G+VP +SFK++PIVVDAR+L  +  EVYLLTILK LKHR AAGA+LP
Sbjct: 947  PRAFSLLEEAASFGIVPCVSFKESPIVVDARELQINMAEVYLLTILKGLKHRRAAGAKLP 1006

Query: 556  NITVLLPIEKTQIESSSGERRTVNIAGRVGQAVGSLLRRLGVKYSGDESYGKIRINGLAL 377
            +I+VLLP+EKTQ+ +   E +++N+AGR+GQA+ +LLRR+G+ Y G+ES+GKIRINGLAL
Sbjct: 1007 SISVLLPLEKTQVLTPERE-KSINLAGRIGQAIAALLRRIGLPYQGNESFGKIRINGLAL 1065

Query: 376  RRWFKPKLSGFSVSGRPGDMASISTRLAKGISDQQRDIRSTNNLSLE 236
            +RWF+PKL+    +G+PG+  +   RL KGIS QQR+IR T NLSL+
Sbjct: 1066 KRWFQPKLAS-PFTGKPGEWNASQMRLGKGISHQQRNIR-TGNLSLD 1110


>ref|XP_002534048.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223525928|gb|EEF28334.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1129

 Score =  978 bits (2528), Expect = 0.0
 Identities = 573/1145 (50%), Positives = 747/1145 (65%), Gaps = 44/1145 (3%)
 Frame = -1

Query: 3541 MDVSITSKAQTLASSVPLSSQFHLPSS--IRREFLGCGTHLRPAG----LRSRTTKR-KI 3383
            M++S + K+Q+LA     +++F    S  IRR+FLGC  +LRP G    LR R +K+ KI
Sbjct: 1    MELSFSPKSQSLALLSTTNTKFSSTKSSFIRRQFLGCSHNLRPPGSASPLRGRKSKKIKI 60

Query: 3382 GLRIHSPRCLLHNPLDENILXXXXXXATFATLQLIYIN--YSRWRRDAPKFSDDQKGDGM 3209
              +  S   L++     + +      +TF+ L   Y++  ++       K S +  GDG 
Sbjct: 61   REKNQSQSLLINASFRLDSVLVVVAVSTFSALSFAYLHHHFTNKNNKKRKTSKEDLGDG- 119

Query: 3208 VGSELCEQDEDILEYEAVGNPLLSGEGLH--------IKPCE-IENAFERIYQNMDYEKV 3056
                L +  ++I+    V +P L    LH        +K  + ++NA E  Y     E V
Sbjct: 120  ----LSQLGKNIVN-NIVRSPFLDVGHLHKVTSTTLEVKSKDLVDNARENSYV---IENV 171

Query: 3055 HDSDAKD-AKQLEFQKAVLAWEDNSVNEVQTGYELAYSPRESE--LIKTNGCT-----GS 2900
              ++     +  E  K     E+   NE     E   S   S    + +N CT      S
Sbjct: 172  LPNETSVLVESTESDKNSYVIENALSNETSVLVESTESDNNSADFTVSSNVCTYVVSKQS 231

Query: 2899 SSTPVLVNEVKTVDGGA------LAAKMPNLLSEKEED-IAVSSCSVISAEKKSGE--SN 2747
             +  VL++ V  + G         A ++  L  E+  D   V S      E+KS +  S+
Sbjct: 232  DNASVLLDPVPVIHGSESVLPLEFARELSELTIERSRDETEVDSELTQLLEEKSNDTASS 291

Query: 2746 QNNYELGHIATKHSDVLISSYDGYLREPDEEVSNCNDEKQPXXXXXXXXXXXXXXSHH-- 2573
              N E+G       D + S YD   +   E++    +E Q               S H  
Sbjct: 292  TMNDEIGK-----KDGISSYYDITKKSAREDLYKFYEESQSTEKSPSNLNGLDTVSSHAA 346

Query: 2572 -FDDNTVCYSHLKTALPDADILAKGSPPTAETLIGSLK----ESPLSKEDELIKGQ-GFT 2411
                N +    +     +A++L+  SP  AET+   +     E   S+++E I G+ GF 
Sbjct: 347  PLIGNNISSLKVNGVGKEAELLSPQSPQFAETVERKVHLARYERGASRKNEHIGGRRGFP 406

Query: 2410 RDIGKTLVHKSNNGDFSSFPQQNGFRR-HVNGPAXXXXXXXXXXXXXXXXDCVDVLERME 2234
            R+  K  V +  + +   FP  NG    + +  A                +CVD+LE ME
Sbjct: 407  REKEKGHVIQDEHTNLPEFPYPNGVHSTNKDHKAEQVHGYNRLLRDGRLAECVDLLEDME 466

Query: 2233 RKGLLDMDKVHHATFLKACKSQKAVKEAFQFCKLIPNPTLSTFNMLLSVCASSQDFDGAF 2054
            R+GLLDM K++HA F K CK QKAVKEAF+FCKL+PNP+LSTFNML+SVC+SSQD DGAF
Sbjct: 467  RRGLLDMSKIYHAKFFKICKIQKAVKEAFRFCKLVPNPSLSTFNMLMSVCSSSQDSDGAF 526

Query: 2053 QAMLIIKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVNAGVEPNVNTYGALIDGC 1874
            + + + + AGLK DCKLYTTLISTCAK GKVDAMFEVFHEMVNAGVEPNV+TYG+LIDGC
Sbjct: 527  EVLRLAQGAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGSLIDGC 586

Query: 1873 ARAGQVAKAFGAYGIMRSKKVQPDRVIFNALITACGQSGAVDRAFDVLAEMRAEPKPIDP 1694
            A+AGQ+AKAFGAYGI+RSK V+PDRV+FNALITACGQSGAVDRAFDVLAEM AE  PIDP
Sbjct: 587  AKAGQMAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAETHPIDP 646

Query: 1693 DHVTIGALIKTCIQAGQVDRVPEVYRMLHMYNIRGTPEVYTIAVNSCSQTGDLEFALSIY 1514
            DH+T+GAL+K C +AGQVDR  EVY MLH YNI+GTPEVYTIAVN CSQTGD EFA S+Y
Sbjct: 647  DHITVGALMKACAKAGQVDRAKEVYNMLHKYNIKGTPEVYTIAVNFCSQTGDWEFARSVY 706

Query: 1513 NDMKKNAIVPDEMFLSTLIDVAGHAGKVDTGFEILKNARSKGIRLGNVSYSSLMGACCNA 1334
            +DM +  + PDEMFLS L+DVAGHAG VD  FE L+ AR++G +LG V YSSLMGAC NA
Sbjct: 707  DDMTRKGVAPDEMFLSALVDVAGHAGLVDIAFETLQEARTQGTQLGIVPYSSLMGACSNA 766

Query: 1333 KNWQKALELFEEIKAIKLLPTVSTLNALITSLCDGDQLLKSVEVLDEIKEAGVQPNIITY 1154
            KNWQKALEL+E+IKAIKL PTVST+NAL+T+LCDGDQL K++E L E+K  G+ PNI+TY
Sbjct: 767  KNWQKALELYEDIKAIKLKPTVSTMNALMTALCDGDQLQKALETLSEMKSFGLCPNIVTY 826

Query: 1153 SILIVACEKKDEAELGFTLFSKAKKDGILPNLIICRCLTGLCLKSLEKAYSLCEPIVTFN 974
            SIL+VA E+KD+ + G  L S+AK+D I P  ++ +C+ G+CL+  +KA SL E I++F+
Sbjct: 827  SILLVASERKDDLDAGDMLLSQAKEDCITPTFLMYKCIIGMCLRRYKKACSLGESILSFD 886

Query: 973  SGKPQIDSKWTSRAIMVYRETISAGVIPTIEVFSQVLGCLQFPHDSSLRNRFVENLDLHI 794
            SG+PQI ++WTSRA+ VYRETI+AG  PT+EV SQVLGCLQ P D+SL+ R VENL +  
Sbjct: 887  SGRPQIKNEWTSRALTVYRETIAAGEKPTMEVVSQVLGCLQLPCDASLKGRLVENLGVTA 946

Query: 793  DASKCSNICSLLDGFGEYDTRCFSVFEEAASLGVVPRISFKDNPIVVDARKLLTHTVEVY 614
            D SK SN+C+L+DGFGEYD R FS+ EEAASLG VP  SFK++PIV+DA+ L +H  EVY
Sbjct: 947  DPSKFSNLCALVDGFGEYDPRAFSLLEEAASLGTVPCASFKESPIVMDAKLLQSHIAEVY 1006

Query: 613  LLTILKALKHRLAAGARLPNITVLLPIEKTQIESSSGERRTVNIAGRVGQAVGSLLRRLG 434
            LLTILK LKHRLAAGA+LPNIT+LLP E TQI++  GE +T+N+AGR+ Q V SLLRRLG
Sbjct: 1007 LLTILKGLKHRLAAGAKLPNITILLPTEMTQIKTLKGE-KTINLAGRISQDVASLLRRLG 1065

Query: 433  VKYSGDESYGKIRINGLALRRWFKPKLSGFSVSGRPGDMASISTRLAKGISDQQRDIRST 254
            + Y G+ESYGKIRING++LRRW +PKL+    SG+P +++   +R+ KGI+ QQR+IR T
Sbjct: 1066 LPYQGNESYGKIRINGISLRRWLQPKLAS-PFSGKPEELSFSLSRIGKGITHQQRNIR-T 1123

Query: 253  NNLSL 239
             NLSL
Sbjct: 1124 GNLSL 1128


>ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 1072

 Score =  972 bits (2512), Expect = 0.0
 Identities = 566/1142 (49%), Positives = 743/1142 (65%), Gaps = 40/1142 (3%)
 Frame = -1

Query: 3541 MDVSITS-KAQTLASSVPLSSQFHL----PSS----IRREFLGCGTHLRPAGLRSRTTKR 3389
            MD+SI S K+Q L  +   SS   L    PSS    IRR+FL     LRP     R    
Sbjct: 1    MDISIFSPKSQALTLTTTCSSPPPLTWLNPSSSLHPIRRQFL----LLRPQTPPPRRKCN 56

Query: 3388 KIGLRIH--SPRCL----LHNPLDENILXXXXXXATFATLQLIYINY---SRWRRDAPKF 3236
             +GL +H  SP+ L    L +P +  ++      ATFA   L Y+N+   +R +  + + 
Sbjct: 57   SLGLLLHTRSPQFLVKASLRSPPNSVLIAVIVALATFAAFSLAYLNHFLQNRRKNSSKQV 116

Query: 3235 SDDQ-KGDGMVGSELCEQDEDILEYEAVGNPLLSGEGLHIKPCEIENAFERIYQNMDYEK 3059
            SD + +G   +GS+  +   DI+E + V   + SGE                        
Sbjct: 117  SDSKIRGTRQLGSDAVD---DIIENQIVR--ISSGEN----------------------- 148

Query: 3058 VHDSDAKDAKQLEFQKAVLAWEDNSVNEVQTGYELAYSPRESELIKTNGCTGSSS----- 2894
                   ++  +E   +      N V+E +T  E  + P  + L +T+   G+ S     
Sbjct: 149  -------ESLMMEIGGS------NQVSEERTEQETTFVPDCTYLTETSVSIGTDSFVSPQ 195

Query: 2893 --TPVLVNEVKTVDGGALAAKMPNL-LSEKEEDIAVSSCSVISAEKKSGESNQNNYELGH 2723
               P ++++   V   + A +M  L L ++++DI     SV+  +               
Sbjct: 196  ECPPFMLSDSGGVQPHSFATEMSELQLGKEKKDIESCESSVLENDA-------------- 241

Query: 2722 IATKHSDVLIS--SYDGYLREPDEEVSNCNDEKQPXXXXXXXXXXXXXXSHHFDD-NTVC 2552
                H++V +   SY        EE   C    Q               S H    N   
Sbjct: 242  ----HAEVSVPTVSYGVLTESVREEQFACGRASQSVLKSPANLEFVKAISSHASPLNGYS 297

Query: 2551 YSHLK--TALPDADILAKGSPPTAETLIGSLK-----ESPLSKEDELIKGQGFTRDIGKT 2393
             S LK  T     ++  + +  TAE + G ++     E P  K     + + F R+  + 
Sbjct: 298  LSSLKRDTEPKGPELSLQEALQTAEHVEGKIRLACHREGPSHKIKARRRIRNFPRNNERI 357

Query: 2392 LVHKSNNGDFSSFPQQNGFRRHVN---GPAXXXXXXXXXXXXXXXXDCVDVLERMERKGL 2222
             + +    +   FP  NG  +H N     +                DC+D+LE MERKGL
Sbjct: 358  NLMQDVGKNMLQFPYPNG--KHANYAHDVSEQLHSYNRLIRQGRISDCIDLLEDMERKGL 415

Query: 2221 LDMDKVHHATFLKACKSQKAVKEAFQFCKLIPNPTLSTFNMLLSVCASSQDFDGAFQAML 2042
            LDMDKV+HA F   CKSQKA+KEAF+F KL+PNPTLSTFNML+SVCASS+D +GAFQ + 
Sbjct: 416  LDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLR 475

Query: 2041 IIKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVNAGVEPNVNTYGALIDGCARAG 1862
            +++EAGLK DCKLYTTLI+TCAK GKVDAMFEVFHEMVNAG+EPNV+TYGALIDGCA+AG
Sbjct: 476  LVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAG 535

Query: 1861 QVAKAFGAYGIMRSKKVQPDRVIFNALITACGQSGAVDRAFDVLAEMRAEPKPIDPDHVT 1682
            QVAKAFGAYGIMRSK V+PDRV+FNALITACGQSGAVDRAFDVLAEM AE  P+DPDH+T
Sbjct: 536  QVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHIT 595

Query: 1681 IGALIKTCIQAGQVDRVPEVYRMLHMYNIRGTPEVYTIAVNSCSQTGDLEFALSIYNDMK 1502
            IGAL+K C  AGQVDR  EVY+M+H YNI+GTPEVYTIA+N CSQTGD EFA S+Y+DM 
Sbjct: 596  IGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMT 655

Query: 1501 KNAIVPDEMFLSTLIDVAGHAGKVDTGFEILKNARSKGIRLGNVSYSSLMGACCNAKNWQ 1322
            K  ++PDE+FLS LID AGHAGKV+  FEIL+ A+++GI +G +SYSSLMGAC NAKNWQ
Sbjct: 656  KKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQ 715

Query: 1321 KALELFEEIKAIKLLPTVSTLNALITSLCDGDQLLKSVEVLDEIKEAGVQPNIITYSILI 1142
            KALEL+E +K+IKL PTVST+NALIT+LCDGD+L K++EVL ++K  G+ PN ITYSIL+
Sbjct: 716  KALELYEHMKSIKLKPTVSTMNALITALCDGDRLPKTMEVLSDMKSLGLCPNTITYSILL 775

Query: 1141 VACEKKDEAELGFTLFSKAKKDGILPNLIICRCLTGLCLKSLEKAYSLCEPIVTFNSGKP 962
            VACE+KD+ E+G  L S+AK+DG++PNL++ +C+ G+C +  EKA +L E +++FNSG+P
Sbjct: 776  VACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLSFNSGRP 835

Query: 961  QIDSKWTSRAIMVYRETISAGVIPTIEVFSQVLGCLQFPHDSSLRNRFVENLDLHIDASK 782
            QI++KWTS  +MVYRE I AG IPT+EV S+VLGCLQ P+++ +R R VENL +  DA K
Sbjct: 836  QIENKWTSLVLMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLGVSADALK 895

Query: 781  CSNICSLLDGFGEYDTRCFSVFEEAASLGVVPRISFKDNPIVVDARKLLTHTVEVYLLTI 602
             SN+CSL+DGFGEYD R FS+ EEAAS G+VP +SFK++P+VVDARKL  HT +VYLLTI
Sbjct: 896  RSNLCSLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKESPVVVDARKLEIHTAKVYLLTI 955

Query: 601  LKALKHRLAAGARLPNITVLLPIEKTQIESSSGERRTVNIAGRVGQAVGSLLRRLGVKYS 422
            LK L+HRLAAGA+LPN+ +LLP+EKTQI S  GE +T++IA R  QA+ +LLRRLG+ Y 
Sbjct: 956  LKGLRHRLAAGAKLPNVNILLPVEKTQIMSVGGE-KTIDIAERTTQAIAALLRRLGLPYQ 1014

Query: 421  GDESYGKIRINGLALRRWFKPKLSGFSVSGRPGDMASISTRLAKGISDQQRDIRSTNNLS 242
            G+ SYGKIRINGLAL+RWF+PKL+    SG+PG+++S+  +L K I+ QQR+IR T NLS
Sbjct: 1015 GNGSYGKIRINGLALKRWFQPKLAS-PFSGKPGELSSL--QLGKFITHQQRNIR-TGNLS 1070

Query: 241  LE 236
            LE
Sbjct: 1071 LE 1072


>ref|XP_008236179.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic [Prunus mume]
          Length = 1065

 Score =  969 bits (2504), Expect = 0.0
 Identities = 553/1123 (49%), Positives = 725/1123 (64%), Gaps = 23/1123 (2%)
 Frame = -1

Query: 3535 VSITSKAQTLA--SSVPLSSQ----FHLPSSIRREFLGCGTH-LRPAG--LRSRTTKRKI 3383
            +S ++K QTL   S  PLSS     F    SIRR FLGCG H +RP    LRS   +R +
Sbjct: 1    MSFSAKPQTLTLISCTPLSSSSSSSFSSLPSIRRHFLGCGGHSIRPLSGDLRSLRKRRSL 60

Query: 3382 GLRIHSP--RCLLHNPLDENILXXXXXXATFATLQLIYINY---SRWRRDAPKFSDDQKG 3218
                 SP  + L+   LD + L       TF+ + ++Y N    S+   DA      +  
Sbjct: 61   AGDRRSPSSKFLIKASLDPHSLLVVVAVVTFSAVSVVYFNRPFKSKKNLDARVRELREVR 120

Query: 3217 DGM-VGSELCEQDEDILEYEAVGNPLLSGEGLHIKPCEIENAFERIYQNMDYEKVHDSDA 3041
            D   V S+L  ++  IL ++A+   +   E +     +  N+ +     + +E       
Sbjct: 121  DAKEVSSQLPIRENQILGFDALNGKI---EEIETPVLQFHNSAQESLAPLVFEST----- 172

Query: 3040 KDAKQLEFQKAVLAWEDNSVNEVQTGYELAYSPRESELIKTNG--CTGSSSTPVLVNEVK 2867
                    Q      E   + + +   ++ Y P   E  K  G         P+     K
Sbjct: 173  -----AVLQPLRFPTELTQLQQPERSEDVDYDPISEEFSKLMGERSEDGGRDPISDEFSK 227

Query: 2866 TVDGGALAAKMPNLLSEKEEDIAVSSCSVISAEKKSGESNQNNYELGHIATKHS--DVLI 2693
             +         P++  + EE+  V     +    + GE+        H+  + S  + L 
Sbjct: 228  LMSDSNFGVASPSVPVDDEENDEVGESDEVGESDEVGEATSF-----HVLNRESVREELH 282

Query: 2692 SSYDGYLREPDEEVSNCNDEKQPXXXXXXXXXXXXXXSHHFDDNTVCYSHLKT-ALPDAD 2516
              Y+   +   + V++ N +K                           S L+   +  AD
Sbjct: 283  MFYESN-KSATKSVASLNGKKPS-------------------------SFLRNITVTGAD 316

Query: 2515 ILAKGSPPTAETLIGSLKESPLSKEDELIKGQGFTRDIGKTLVHKSNNGDFSSFPQQNGF 2336
            ++ + S  T E++ G       S++D L KG G++ D     + K N+G  + FP  +G 
Sbjct: 317  LIPQASHHTTESIEGHTH----SRKD-LGKGSGYSSDKEVRHLPKKNSGTMTQFPHPHGI 371

Query: 2335 RRHVNGPAXXXXXXXXXXXXXXXXDCVD---VLERMERKGLLDMDKVHHATFLKACKSQK 2165
              H N                      D   +LE MER+GLLDM+KV+HA F + CKSQK
Sbjct: 372  --HTNDRDLLSEQLSAYHRLLKDGRLGDSLKLLEDMERRGLLDMNKVYHARFFEICKSQK 429

Query: 2164 AVKEAFQFCKLIPNPTLSTFNMLLSVCASSQDFDGAFQAMLIIKEAGLKPDCKLYTTLIS 1985
            AV +AF+F KLIPNPTLST+NML++VCASSQD + AF  + +++EAG+KPDCKLYTTLIS
Sbjct: 430  AVDKAFRFIKLIPNPTLSTYNMLMTVCASSQDSEEAFHVLRLVREAGMKPDCKLYTTLIS 489

Query: 1984 TCAKCGKVDAMFEVFHEMVNAGVEPNVNTYGALIDGCARAGQVAKAFGAYGIMRSKKVQP 1805
            TC K GKV  MF+VFHEMVNAGVEPNV+TYGALIDGC RAG+VAKAFGAYGIMRSKKV+P
Sbjct: 490  TCGKSGKVYTMFDVFHEMVNAGVEPNVHTYGALIDGCGRAGEVAKAFGAYGIMRSKKVKP 549

Query: 1804 DRVIFNALITACGQSGAVDRAFDVLAEMRAEPKPIDPDHVTIGALIKTCIQAGQVDRVPE 1625
            DRV+FNALITACGQSGAVDRAFDVL EM AE +PI+PDH TIGALIK C  AGQVDR  E
Sbjct: 550  DRVVFNALITACGQSGAVDRAFDVLGEMMAETQPIEPDHTTIGALIKACANAGQVDRARE 609

Query: 1624 VYRMLHMYNIRGTPEVYTIAVNSCSQTGDLEFALSIYNDMKKNAIVPDEMFLSTLIDVAG 1445
            VY+M+H Y I+G+ EVYTIAVN CSQTGD EFA ++Y+DM +  +VPDEMFLS LIDVAG
Sbjct: 610  VYKMVHKYKIKGSSEVYTIAVNCCSQTGDWEFACNVYSDMTRKGVVPDEMFLSALIDVAG 669

Query: 1444 HAGKVDTGFEILKNARSKGIRLGNVSYSSLMGACCNAKNWQKALELFEEIKAIKLLPTVS 1265
            HAGK+D  FEIL+ AR++GI+LG VSYSSLMGAC NAKNWQKALEL+E +K+ K+  TVS
Sbjct: 670  HAGKLDAAFEILQEARNQGIQLGTVSYSSLMGACSNAKNWQKALELYEYLKSTKIEKTVS 729

Query: 1264 TLNALITSLCDGDQLLKSVEVLDEIKEAGVQPNIITYSILIVACEKKDEAELGFTLFSKA 1085
            T+NALIT+LCDGDQL K++EVL E+K  G+ PN ITYSI++VA EKKD+ E G  L S+A
Sbjct: 730  TVNALITALCDGDQLQKAMEVLSEMKGFGLHPNSITYSIILVASEKKDDLEAGHMLLSQA 789

Query: 1084 KKDGILPNLIICRCLTGLCLKSLEKAYSLCEPIVTFNSGKPQIDSKWTSRAIMVYRETIS 905
            +KDG+ PNL++CRC+ G+CL+  EKA SL EP++  +  +PQ+DSKW S A+MVYR+TI 
Sbjct: 790  EKDGVAPNLVMCRCIIGMCLRRSEKACSLGEPVL--SRDRPQVDSKWASMALMVYRKTIV 847

Query: 904  AGVIPTIEVFSQVLGCLQFPHDSSLRNRFVENLDLHIDASKCSNICSLLDGFGEYDTRCF 725
            AG++PT+EV SQVLGCLQ P+D+S +NR +ENL +  D S+ SN+CSL+DGFGEYD R F
Sbjct: 848  AGIMPTVEVISQVLGCLQLPYDASFKNRLIENLGVTADTSRPSNLCSLIDGFGEYDPRAF 907

Query: 724  SVFEEAASLGVVPRISFKDNPIVVDARKLLTHTVEVYLLTILKALKHRLAAGARLPNITV 545
            S+ EEAASLG+VP +SFK +PIVVDARKL  HT EV++LT+LK LKHRLAAGA+LPN+++
Sbjct: 908  SLLEEAASLGIVPCVSFKASPIVVDARKLQLHTAEVFILTVLKGLKHRLAAGAKLPNMSI 967

Query: 544  LLPIEKTQIESSSGERRTVNIAGRVGQAVGSLLRRLGVKYSGDESYGKIRINGLALRRWF 365
            LLP+EKTQI S  G  +T+NIAGRVGQ+V +LLRRLG+ Y G+ES GKI+I+GLA++RW 
Sbjct: 968  LLPVEKTQIMSPKG--KTINIAGRVGQSVAALLRRLGIPYQGNESRGKIKISGLAMKRWL 1025

Query: 364  KPKLSGFSVSGRPGDMASISTRLAKGISDQQRDIRSTNNLSLE 236
            +PKL+ F  +G+PG+  S   +L KGI+ QQR+IR T NLSLE
Sbjct: 1026 QPKLASF--TGKPGEFGSSQLQLGKGITHQQRNIR-TGNLSLE 1065


>ref|XP_012084399.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic [Jatropha curcas]
            gi|643715661|gb|KDP27602.1| hypothetical protein
            JCGZ_19607 [Jatropha curcas]
          Length = 1112

 Score =  965 bits (2494), Expect = 0.0
 Identities = 560/1148 (48%), Positives = 730/1148 (63%), Gaps = 46/1148 (4%)
 Frame = -1

Query: 3541 MDVSITSKAQ--TLASSVPLSSQFHLPSSIRREFLGCGTHLRPAGLRSRTTK-RKIGLRI 3371
            MD+S ++K Q  TL S+  +S      SSIRREFLGC  +LRP G   R  K RK+ +R 
Sbjct: 1    MDLSFSAKFQALTLISTSQISFLSSNKSSIRREFLGCSHNLRPPGGSLRVGKCRKVKIRR 60

Query: 3370 HSPRCLLHNPL--DENILXXXXXXATFATLQLIYINY-----------SRWRRDAPKFSD 3230
               + LL N     E++L       T + +   Y+N            S+    +P    
Sbjct: 61   SQSQSLLLNASFGSESVLVAVAVS-TLSAISFAYLNQQITSNNGNRKDSKEASGSPGLGS 119

Query: 3229 DQKGDGMVG---------------SELCEQDEDILEYEAVGNPLLSGEGLHIKPCE--IE 3101
             Q G  +V                S L  + E+++E     +  + GE   ++ CE  + 
Sbjct: 120  SQLGKNIVNHVIQTPSADVGNSLRSILATESENLVEKAIENSHAIEGEETVVQVCENTLR 179

Query: 3100 NAFERIYQNMDYEKVHDSDAKDAKQLEFQKAVLAWEDNSVNEVQTGYELAYSPRESELIK 2921
            +    +++  +Y      D  D         V+  E  + N V    E A    E  L  
Sbjct: 180  STSSILFETSEY------DNADFPVSNVSNYVVPKESEATN-VSVSKESAIPESEKVLPL 232

Query: 2920 TNGCTGSSSTPVLVNEVKTVDGGALAAKMPNLLSEKEEDIAVSSCSVISAEKKSGESNQN 2741
                 G S    L       D   + A++ +L+ +   + A               S   
Sbjct: 233  VLNARGMSEL-TLEKSGNETDVHEVDAELTHLMEQMSNNTA---------------SPPV 276

Query: 2740 NYELGHIATKHSDVLISSYDGYLREPD-EEVSNCNDEKQPXXXXXXXXXXXXXXSHHFDD 2564
            NYE G        + +SSY G ++E   E++    D+ Q               S H   
Sbjct: 277  NYEAGE------KIDLSSYHGIIKESAREDLYMFYDKSQSVVKSPLNLNGSNSVSSHASP 330

Query: 2563 ---NTVCYSHLKTALPDADILAKGSPPTAET------LIGSLKESPLSKEDELIKGQGFT 2411
               N+     +   + +AD  A+ SP  AE+      L   ++ES   K +   + +GF 
Sbjct: 331  SIGNSFSSFKVNGIVKEADSSAQQSPKIAESVDKKVRLAHYVRESS-RKNENTRRRRGFP 389

Query: 2410 RDIGKTLVHKSNNGDFSSFPQQNGFRRHV---NGPAXXXXXXXXXXXXXXXXDCVDVLER 2240
             +  K    ++N      FP  NG   HV   + P+                +CV +LE 
Sbjct: 390  TEKEKGRPVQNNQIKLPEFPYPNGV--HVIDKDHPSQQVHAYNRLLRDGRLTECVSLLED 447

Query: 2239 MERKGLLDMDKVHHATFLKACKSQKAVKEAFQFCKLIPNPTLSTFNMLLSVCASSQDFDG 2060
            MER+GLLDM+K++HA F K CK QKAV EAF+FCKL+PNPTLST+NML+SVCASSQD  G
Sbjct: 448  MERRGLLDMNKIYHAKFFKICKIQKAVNEAFRFCKLVPNPTLSTYNMLMSVCASSQDSSG 507

Query: 2059 AFQAMLIIKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVNAGVEPNVNTYGALID 1880
            AFQ + + + +GLK DC+LYTTLISTCAK GKVD MFEVFH+MVNAGVEPNV+TYGALID
Sbjct: 508  AFQVLQLARGSGLKADCRLYTTLISTCAKSGKVDTMFEVFHKMVNAGVEPNVHTYGALID 567

Query: 1879 GCARAGQVAKAFGAYGIMRSKKVQPDRVIFNALITACGQSGAVDRAFDVLAEMRAEPKPI 1700
            GCARAGQ+AKAFGAYGIM SKKV+PDRV+FNALI ACGQSGAVDRAFDVLAEMRAE +PI
Sbjct: 568  GCARAGQLAKAFGAYGIMSSKKVKPDRVVFNALINACGQSGAVDRAFDVLAEMRAETQPI 627

Query: 1699 DPDHVTIGALIKTCIQAGQVDRVPEVYRMLHMYNIRGTPEVYTIAVNSCSQTGDLEFALS 1520
            DPDH+T+GALI  C +AGQ++R  EVY M+H +NI+GTPEVYTIAVN CSQTGD EFA S
Sbjct: 628  DPDHITVGALINACAKAGQINRAKEVYNMMHEFNIKGTPEVYTIAVNCCSQTGDWEFARS 687

Query: 1519 IYNDMKKNAIVPDEMFLSTLIDVAGHAGKVDTGFEILKNARSKGIRLGNVSYSSLMGACC 1340
            +Y+DMK+  + PDEMFLS LIDVAGHAGKVD  FEIL+ AR +G++LG + YSSLMGAC 
Sbjct: 688  VYDDMKRKDVAPDEMFLSALIDVAGHAGKVDVAFEILQEARIQGMQLGIIPYSSLMGACS 747

Query: 1339 NAKNWQKALELFEEIKAIKLLPTVSTLNALITSLCDGDQLLKSVEVLDEIKEAGVQPNII 1160
            NAKNWQKALEL+E+IK+IK+ PTV TLNALIT+LCDGDQL K++EV+ E+K   + PN +
Sbjct: 748  NAKNWQKALELYEDIKSIKVNPTVPTLNALITALCDGDQLPKAIEVMSEMKSFRLCPNTV 807

Query: 1159 TYSILIVACEKKDEAELGFTLFSKAKKDGILPNLIICRCLTGLCLKSLEKAYSLCEPIVT 980
            TYSIL VA E+KD+ E+G  L S+AK+D I P LI+ +C+ G+CL+  EK  +L EP+++
Sbjct: 808  TYSILFVASERKDDLEVGLRLLSQAKEDCIAPTLIMYKCIIGMCLRRYEKVCALGEPVLS 867

Query: 979  FNSGKPQIDSKWTSRAIMVYRETISAGVIPTIEVFSQVLGCLQFPHDSSLRNRFVENLDL 800
            F+SG+PQ+ ++WTS A+MVYRETI+AG   T+EV SQVLGCLQ P D+SL++R VENL +
Sbjct: 868  FDSGRPQMKNEWTSLALMVYRETIAAGEKLTMEVVSQVLGCLQLPFDASLKHRLVENLGV 927

Query: 799  HIDASKCSNICSLLDGFGEYDTRCFSVFEEAASLGVVPRISFKDNPIVVDARKLLTHTVE 620
              D+SK SN+CSL+DGFGEYD R FS+ EEAASLG++P +SFK++PI+VDA+ L +H  +
Sbjct: 928  TTDSSKVSNLCSLVDGFGEYDPRAFSLLEEAASLGIIPCVSFKESPIIVDAKALQSHVAQ 987

Query: 619  VYLLTILKALKHRLAAGARLPNITVLLPIEKTQIESSSGERRTVNIAGRVGQAVGSLLRR 440
            VYLLTILK LKHRLAAGARLPNIT+LLP E  Q++   GE +T+NIA RV Q V +LLRR
Sbjct: 988  VYLLTILKGLKHRLAAGARLPNITILLPTETAQVKVPEGE-KTINIAARVSQDVAALLRR 1046

Query: 439  LGVKYSGDESYGKIRINGLALRRWFKPKLSGFSVSGRPGDMASISTRLAKGISDQQRDIR 260
            L + Y G+ESYGKIRING++L+RWF+PKL+ +  SG+P ++ S   R+ K IS QQR+IR
Sbjct: 1047 LRLHYQGNESYGKIRINGISLKRWFQPKLA-YPFSGKPEELNSSLLRIGKDISHQQRNIR 1105

Query: 259  STNNLSLE 236
             T NLSLE
Sbjct: 1106 -TGNLSLE 1112


>ref|XP_007199677.1| hypothetical protein PRUPE_ppa000631mg [Prunus persica]
            gi|462395077|gb|EMJ00876.1| hypothetical protein
            PRUPE_ppa000631mg [Prunus persica]
          Length = 1060

 Score =  961 bits (2483), Expect = 0.0
 Identities = 554/1127 (49%), Positives = 731/1127 (64%), Gaps = 27/1127 (2%)
 Frame = -1

Query: 3535 VSITSKAQTLA--SSVPLSSQFH------LPSSIRREFLGCGTH-LRPAG--LRSRTTKR 3389
            +S ++K QTL   S  PLSS         LPS IRR FLGCG H LRP    LRS   +R
Sbjct: 1    MSFSAKPQTLTLISCTPLSSSSSSSFSSSLPS-IRRHFLGCGGHSLRPLSGDLRSLRKRR 59

Query: 3388 KIGLRIHSP--RCLLHNPLDENILXXXXXXATFATLQLIYINY---SRWRRDAPKFSDDQ 3224
             +     SP  + L+   LD + L       TF+ + ++Y N    S+   DA      +
Sbjct: 60   SLAGDHRSPPSKFLIKASLDPHSLLVVVAIVTFSAVSVVYFNRPFKSKKNLDARVRELRE 119

Query: 3223 KGDGM-VGSELCEQDEDILEYEAVGNPLLSGEGLHIKPCEIENAFERIYQNMDYEKVHDS 3047
              D   V S+L  ++  IL ++A+   +   E +     +  N+ +     + +E     
Sbjct: 120  VRDAKEVSSQLPIRENQILGFDALNGKI---EEIEAPVLQFHNSAQESLAPLVFEST--- 173

Query: 3046 DAKDAKQLEFQKAVLAWEDNSVNEVQTGYELAYSPRESELIKTNGCTGSSSTPVLVNEVK 2867
                      Q      E   + + +   ++ Y P   E  K  G              +
Sbjct: 174  -------AVLQPLRFPTELTQLQQPERSEDVDYDPISEEFSKLMG-------------ER 213

Query: 2866 TVDGGA--LAAKMPNLLSEKEEDIAVSSCSVISAEK-KSGESNQNNYELG-HIATKHS-- 2705
            + DGG   ++ +   L+S+    +A  S  V   E  + GES++       H+  + S  
Sbjct: 214  SEDGGRDPISDEFSKLMSDSNFGVASPSVPVDDEESVEVGESDEVGEATSFHVLNRESVR 273

Query: 2704 DVLISSYDGYLREPDEEVSNCNDEKQPXXXXXXXXXXXXXXSHHFDDNTVCYSHLKT-AL 2528
            + L   Y+    E  + V++ N +K                           S L+   +
Sbjct: 274  EELHMFYESNKSET-KSVASLNGKKPS-------------------------SFLRNITV 307

Query: 2527 PDADILAKGSPPTAETLIGSLKESPLSKEDELIKGQGFTRDIGKTLVHKSNNGDFSSFPQ 2348
              AD++ + S  T E++ G  +    S++D L KG G++ D     + K N+G  + FP 
Sbjct: 308  TGADLIPQASHHTTESIEGHTR----SRKD-LGKGSGYSSDKEVRHLPKKNSGTMTQFPH 362

Query: 2347 QNGFRRHVNGPAXXXXXXXXXXXXXXXXDCVD---VLERMERKGLLDMDKVHHATFLKAC 2177
             +G   H N                      D   +LE +ER+GLLDM+KV+HA F + C
Sbjct: 363  PHGI--HTNDRDLLSEQLSAYHRLLKDGRLGDSLKLLEDLERRGLLDMNKVYHARFFEIC 420

Query: 2176 KSQKAVKEAFQFCKLIPNPTLSTFNMLLSVCASSQDFDGAFQAMLIIKEAGLKPDCKLYT 1997
            KSQKAV +AF+F KLIPNPTLST+NML++VCASSQD + AF  + +++EAG+KPDCKLYT
Sbjct: 421  KSQKAVDKAFRFIKLIPNPTLSTYNMLMTVCASSQDSEEAFHVLRLVREAGMKPDCKLYT 480

Query: 1996 TLISTCAKCGKVDAMFEVFHEMVNAGVEPNVNTYGALIDGCARAGQVAKAFGAYGIMRSK 1817
            TLISTC K GKV  MF+VFHEMVNAGVEPNV+TYGALIDGC RAG+VAKAFGAYGIMRSK
Sbjct: 481  TLISTCGKSGKVYTMFDVFHEMVNAGVEPNVHTYGALIDGCGRAGEVAKAFGAYGIMRSK 540

Query: 1816 KVQPDRVIFNALITACGQSGAVDRAFDVLAEMRAEPKPIDPDHVTIGALIKTCIQAGQVD 1637
            KV+PDRV+FNALITACGQSGAVDRAFDVL EM AE +PI+PDH T+GALIK C  AGQVD
Sbjct: 541  KVKPDRVVFNALITACGQSGAVDRAFDVLGEMMAETQPIEPDHTTVGALIKACANAGQVD 600

Query: 1636 RVPEVYRMLHMYNIRGTPEVYTIAVNSCSQTGDLEFALSIYNDMKKNAIVPDEMFLSTLI 1457
            R  EVY+M+H Y I+G+ EVYTIAVN CSQTGD EFA ++Y+DM +  +VPDEMFLS LI
Sbjct: 601  RAREVYKMVHKYKIKGSSEVYTIAVNCCSQTGDWEFACNVYSDMTRKGVVPDEMFLSALI 660

Query: 1456 DVAGHAGKVDTGFEILKNARSKGIRLGNVSYSSLMGACCNAKNWQKALELFEEIKAIKLL 1277
            DVAGH GK+D  FEIL+ AR++GI++G VSYSSLMGAC NAKNW KALEL+E +K+ K+ 
Sbjct: 661  DVAGHVGKLDAAFEILQEARNQGIQVGTVSYSSLMGACSNAKNWHKALELYEYLKSTKIE 720

Query: 1276 PTVSTLNALITSLCDGDQLLKSVEVLDEIKEAGVQPNIITYSILIVACEKKDEAELGFTL 1097
             TVST+NALIT+LCDGDQL K++EVL E+K  G+ PN ITYSIL+VA EKKD+ E G  L
Sbjct: 721  KTVSTVNALITALCDGDQLQKAMEVLSEMKGFGLHPNSITYSILLVASEKKDDLEAGHML 780

Query: 1096 FSKAKKDGILPNLIICRCLTGLCLKSLEKAYSLCEPIVTFNSGKPQIDSKWTSRAIMVYR 917
             S+A+KDG+ PNL++CRC+ G+CL+  EKA SL EP++  +  +PQ+DSKW S A+MVYR
Sbjct: 781  LSQAEKDGVAPNLVMCRCIIGMCLRRSEKACSLGEPVL--SRDRPQVDSKWASLALMVYR 838

Query: 916  ETISAGVIPTIEVFSQVLGCLQFPHDSSLRNRFVENLDLHIDASKCSNICSLLDGFGEYD 737
            +TI AG++PT+EV SQVLGCLQ P+D+S +NR +ENL +  + S+ SN+CSL+DGFGEYD
Sbjct: 839  KTIVAGIMPTVEVISQVLGCLQLPYDASFKNRLIENLGVTAETSRPSNLCSLIDGFGEYD 898

Query: 736  TRCFSVFEEAASLGVVPRISFKDNPIVVDARKLLTHTVEVYLLTILKALKHRLAAGARLP 557
             R FS+ EEAASLG+VP +SFK +P+VVDARKL  HT EV++LT+LK LKHRLAAGA+LP
Sbjct: 899  PRAFSLLEEAASLGIVPCVSFKASPVVVDARKLQLHTAEVFILTVLKGLKHRLAAGAKLP 958

Query: 556  NITVLLPIEKTQIESSSGERRTVNIAGRVGQAVGSLLRRLGVKYSGDESYGKIRINGLAL 377
            N+T+LLP+EKTQI S  G  +T+NIAGRVGQ+V +LLRRLG+ Y G+ES GKI+I+GLA+
Sbjct: 959  NMTILLPVEKTQIMSPKG--KTINIAGRVGQSVAALLRRLGIPYQGNESRGKIKISGLAM 1016

Query: 376  RRWFKPKLSGFSVSGRPGDMASISTRLAKGISDQQRDIRSTNNLSLE 236
            +RW +PKL+ F  +G+PG+  S   +L KGI+ QQR+IR T NLSL+
Sbjct: 1017 KRWLQPKLASF--TGKPGEFGSSQLQLGKGITHQQRNIR-TGNLSLD 1060


>ref|XP_012442072.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X1 [Gossypium raimondii]
            gi|763743696|gb|KJB11195.1| hypothetical protein
            B456_001G246900 [Gossypium raimondii]
          Length = 1106

 Score =  958 bits (2477), Expect = 0.0
 Identities = 549/1123 (48%), Positives = 723/1123 (64%), Gaps = 24/1123 (2%)
 Frame = -1

Query: 3535 VSITSKAQT--LASSVPLSSQFHLPSSIRREFLGCGTHL-RPAGLRSRTTKRK--IGLRI 3371
            + ++ K QT     S P SS    P  I R+FLG    L  P G  S   KRK    LR 
Sbjct: 6    IFLSPKFQTPNFLPSYPFSSSTTRPL-ISRQFLGFTHSLWHPGGASSLRKKRKNLAFLRF 64

Query: 3370 HSPRCLLHNPLDENILXXXXXXATFATLQLIYIN-YSRWRRDAPKFSDDQKGDGMVGSEL 3194
              PR +    +D N++         + L L + N + R  + + K S    G        
Sbjct: 65   QPPRFVSRASIDSNLVFVVIGVTALSALSLAFYNQFFRKSQTSKKVS----GSSRSALRQ 120

Query: 3193 CEQDEDILEYEAVGNPLLSGEGLHIKPCEIENAFERIYQNMDYEKVHDSDAKDAKQLEFQ 3014
              Q +D++   A    L +G+          + F +    +       +DA ++K++  Q
Sbjct: 121  QRQGKDVVIQTADHQILETGDLQR-------DTFAKENGGLTEHMKEVNDASESKEVLLQ 173

Query: 3013 KAVLAWEDNSVNEVQTGYE---LAYSPRESELIKTNGCTGSSSTPVLVNEVKTVDGGALA 2843
            +  +   D+ + +         LA++  +S++++ +G T     P ++ E         A
Sbjct: 174  ETAVVNGDSMLTKASESNGADFLAFNANDSDVLEESGTTVLPLQPTVLLESGAGQPFTFA 233

Query: 2842 AKMPNLLSEKEEDIAVSSCSVISAEKKSGESNQNNYELGHIATKHSDVLIS-----SYDG 2678
             +   L  E+  +   +    ++ E KS  S+        +  + + VLI      +YD 
Sbjct: 234  TQRSGLHLEERVNEFEADYPRLAVEPKSSASS--------VLVEDAVVLIGEDKVRNYDI 285

Query: 2677 YLREPDEEVSNCNDEKQPXXXXXXXXXXXXXXSHHFDDNTVCYSHLKTALP---DADIL- 2510
            +     EE+    +                  SH    N+  +S LK  L    + D L 
Sbjct: 286  FRESGREELHTFYEADHLVAKSSSNLTLKPVSSHFLSSNSNKFSSLKLKLNSELNKDALS 345

Query: 2509 AKGSPPTAETLIGSLKESPLS-----KEDELIKGQGFTRDIGKTLVHKSNNGDFSSFPQQ 2345
            AK S  TA+ + G + ++        K   L +G+   RD GK  + +  +   + FP  
Sbjct: 346  AKNSLQTADMVEGKVTQANFQGGFSHKRKHLGRGRESPRDKGKKHLIQEKDTKLAQFPFP 405

Query: 2344 NG-FRRHVNGPAXXXXXXXXXXXXXXXXDCVDVLERMERKGLLDMDKVHHATFLKACKSQ 2168
            NG      + P                 D VD+LE ME+KGLLDMDKV+HA F K C  Q
Sbjct: 406  NGELANDKHHPEEYLSYYNHLLRCGRLSDSVDLLEDMEQKGLLDMDKVYHAKFFKICSKQ 465

Query: 2167 KAVKEAFQFCKLIPNPTLSTFNMLLSVCASSQDFDGAFQAMLIIKEAGLKPDCKLYTTLI 1988
            KAVKEAF+F KLI NPTLSTFNML+SVC  S+D +GAFQ + +++EAG + DC LYTTLI
Sbjct: 466  KAVKEAFRFTKLIANPTLSTFNMLMSVCGCSKDSEGAFQVLRLVQEAGFQADCILYTTLI 525

Query: 1987 STCAKCGKVDAMFEVFHEMVNAGVEPNVNTYGALIDGCARAGQVAKAFGAYGIMRSKKVQ 1808
            STCAK GKVD MFEVFHEMVN+GVEPNVNTYGALIDGCARAGQV KAFGAYGIMRSK V+
Sbjct: 526  STCAKSGKVDTMFEVFHEMVNSGVEPNVNTYGALIDGCARAGQVPKAFGAYGIMRSKNVK 585

Query: 1807 PDRVIFNALITACGQSGAVDRAFDVLAEMRAEPKPIDPDHVTIGALIKTCIQAGQVDRVP 1628
            PDRV+FNALITACGQSGAVDRAFDVLAEM AE +PIDPDH+T+GALIK C  AGQV+R  
Sbjct: 586  PDRVVFNALITACGQSGAVDRAFDVLAEMMAETQPIDPDHITVGALIKACSNAGQVERAR 645

Query: 1627 EVYRMLHMYNIRGTPEVYTIAVNSCSQTGDLEFALSIYNDMKKNAIVPDEMFLSTLIDVA 1448
            EVY+M+H +NIRGTPEVYTIAVN CSQTGD EFA  +YNDMKK  + PDE+F+S LIDVA
Sbjct: 646  EVYKMMHKFNIRGTPEVYTIAVNCCSQTGDWEFACGVYNDMKKKGVAPDEVFISALIDVA 705

Query: 1447 GHAGKVDTGFEILKNARSKGIRLGNVSYSSLMGACCNAKNWQKALELFEEIKAIKLLPTV 1268
            GHAGK+D  FE+L+ A++ GI  G VSYSSLMGAC NA+NWQKALEL+E IKA+KL  TV
Sbjct: 706  GHAGKLDAAFELLQEAKNHGINSGIVSYSSLMGACSNARNWQKALELYENIKALKLKLTV 765

Query: 1267 STLNALITSLCDGDQLLKSVEVLDEIKEAGVQPNIITYSILIVACEKKDEAELGFTLFSK 1088
            ST+NALITSLC+ +QL K++EVL E++E+G+ PNIITYSIL+VA E+  + E+G  L SK
Sbjct: 766  STVNALITSLCEANQLPKAMEVLSEMEESGLSPNIITYSILLVASERNGDLEVGLMLLSK 825

Query: 1087 AKKDGILPNLIICRCLTGLCLKSLEKAYSLCEPIVTFNSGKPQIDSKWTSRAIMVYRETI 908
            A+ DGI PNL++ RC+ G+CL+   KA ++ EP+++FNSG+P I++KW S A+ VYRETI
Sbjct: 826  ARDDGIAPNLVMSRCIIGMCLRRFVKACAVGEPVLSFNSGRPHIENKWMSVALTVYRETI 885

Query: 907  SAGVIPTIEVFSQVLGCLQFPHDSSLRNRFVENLDLHIDASKCSNICSLLDGFGEYDTRC 728
             AG +PT+EV S++LGCLQ P D SLR+R VENL++  D S+ S++ SL+DGFGEYD R 
Sbjct: 886  DAGTVPTMEVVSKILGCLQLPRDDSLRSRLVENLEVIADPSRSSSLGSLIDGFGEYDPRA 945

Query: 727  FSVFEEAASLGVVPRISFKDNPIVVDARKLLTHTVEVYLLTILKALKHRLAAGARLPNIT 548
            FS+ EEAAS G+VP +SFK++PIVVDAR+L  +T EVYLLTILK LKHRLAAGA+LP+I+
Sbjct: 946  FSLLEEAASFGIVPCVSFKESPIVVDARELQINTAEVYLLTILKGLKHRLAAGAKLPSIS 1005

Query: 547  VLLPIEKTQIESSSGERRTVNIAGRVGQAVGSLLRRLGVKYSGDESYGKIRINGLALRRW 368
            +LLP+EK QI +S GE +++N+AGR+GQA+ +LLRR+ + Y G+ESYGKIRINGLALR+W
Sbjct: 1006 ILLPLEKAQILTSGGE-KSINVAGRMGQAIAALLRRIKLPYQGNESYGKIRINGLALRKW 1064

Query: 367  FKPKLSGFSVSGRPGDMASISTRLAKGISDQQRDIRSTNNLSL 239
            F+PKL+    +G+PG+  +   RL KGIS QQR+IR T NLSL
Sbjct: 1065 FQPKLAS-PFTGKPGEWNASQMRLGKGISHQQRNIR-TGNLSL 1105


>gb|KDO42798.1| hypothetical protein CISIN_1g005129mg [Citrus sinensis]
            gi|641823386|gb|KDO42799.1| hypothetical protein
            CISIN_1g005129mg [Citrus sinensis]
            gi|641823387|gb|KDO42800.1| hypothetical protein
            CISIN_1g005129mg [Citrus sinensis]
          Length = 713

 Score =  957 bits (2474), Expect = 0.0
 Identities = 465/675 (68%), Positives = 573/675 (84%)
 Frame = -1

Query: 2260 CVDVLERMERKGLLDMDKVHHATFLKACKSQKAVKEAFQFCKLIPNPTLSTFNMLLSVCA 2081
            C+D+LE MERKGLLDMDKV+HA F   CKSQKA+KEAF+F KL+PNPTLSTFNML+SVCA
Sbjct: 44   CIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCA 103

Query: 2080 SSQDFDGAFQAMLIIKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVNAGVEPNVN 1901
            SS+D +GAFQ + +++EAGLK DCKLYTTLI+TCAK GKVDAMFEVFHEMVNAG+EPNV+
Sbjct: 104  SSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVH 163

Query: 1900 TYGALIDGCARAGQVAKAFGAYGIMRSKKVQPDRVIFNALITACGQSGAVDRAFDVLAEM 1721
            TYGALIDGCA+AGQVAKAFGAYGIMRSK V+PDRV+FNALITACGQSGAVDRAFDVLAEM
Sbjct: 164  TYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM 223

Query: 1720 RAEPKPIDPDHVTIGALIKTCIQAGQVDRVPEVYRMLHMYNIRGTPEVYTIAVNSCSQTG 1541
             AE  P+DPDH+TIGAL+K C  AGQVDR  EVY+M+H YNI+GTPEVYTIA+N CSQTG
Sbjct: 224  NAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTG 283

Query: 1540 DLEFALSIYNDMKKNAIVPDEMFLSTLIDVAGHAGKVDTGFEILKNARSKGIRLGNVSYS 1361
            D EFA S+Y+DM K  ++PDE+FLS LID AGHAGKV+  FEIL+ A+++GI +G +SYS
Sbjct: 284  DWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYS 343

Query: 1360 SLMGACCNAKNWQKALELFEEIKAIKLLPTVSTLNALITSLCDGDQLLKSVEVLDEIKEA 1181
            SLMGAC NAKNWQKALEL+E +K+IKL PTVST+NALIT+LCDGDQL K++EVL ++K  
Sbjct: 344  SLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSL 403

Query: 1180 GVQPNIITYSILIVACEKKDEAELGFTLFSKAKKDGILPNLIICRCLTGLCLKSLEKAYS 1001
            G+ PN ITYSIL+VACE+KD+ E+G  L S+AK+DG++PNL++ +C+ G+C +  EKA +
Sbjct: 404  GLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKART 463

Query: 1000 LCEPIVTFNSGKPQIDSKWTSRAIMVYRETISAGVIPTIEVFSQVLGCLQFPHDSSLRNR 821
            L E +++FNSG+PQI++KWTS A+MVYRE I AG IPT+EV S+VLGCLQ P+++ +R R
Sbjct: 464  LNEHVLSFNSGRPQIENKWTSLALMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRER 523

Query: 820  FVENLDLHIDASKCSNICSLLDGFGEYDTRCFSVFEEAASLGVVPRISFKDNPIVVDARK 641
             VENL +  DA K SN+CSL+DGFGEYD R FS+ EEAAS G+VP +SFK+ P+VVDARK
Sbjct: 524  LVENLGVSADALKRSNLCSLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKEIPVVVDARK 583

Query: 640  LLTHTVEVYLLTILKALKHRLAAGARLPNITVLLPIEKTQIESSSGERRTVNIAGRVGQA 461
            L  HT +VYLLTILK L+HRLAAGA+LPN+ +LLP+EKTQI S  GE +T++IA R  QA
Sbjct: 584  LEIHTAKVYLLTILKGLRHRLAAGAKLPNVNILLPVEKTQIMSVGGE-KTIDIAERTTQA 642

Query: 460  VGSLLRRLGVKYSGDESYGKIRINGLALRRWFKPKLSGFSVSGRPGDMASISTRLAKGIS 281
            + +LLRRLG+ Y G+ SYGKIRINGLAL+RWF+PKL+    SG+PG+++S+  +L K I+
Sbjct: 643  IAALLRRLGLPYQGNGSYGKIRINGLALKRWFQPKLAS-PFSGKPGELSSL--QLGKFIT 699

Query: 280  DQQRDIRSTNNLSLE 236
             QQR+IR T NLSLE
Sbjct: 700  HQQRNIR-TGNLSLE 713


>ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 713

 Score =  956 bits (2470), Expect = 0.0
 Identities = 463/675 (68%), Positives = 573/675 (84%)
 Frame = -1

Query: 2260 CVDVLERMERKGLLDMDKVHHATFLKACKSQKAVKEAFQFCKLIPNPTLSTFNMLLSVCA 2081
            C+D+LE MERKGLLDMDKV+HA F   CKSQKA+KEAF+F KL+PNPTLSTFNML+SVCA
Sbjct: 44   CIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCA 103

Query: 2080 SSQDFDGAFQAMLIIKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVNAGVEPNVN 1901
            SS+D +GAFQ + +++EAGLK DCKLYTTLI+TCAK GKVDAMFEVFHEMVNAG+EPNV+
Sbjct: 104  SSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVH 163

Query: 1900 TYGALIDGCARAGQVAKAFGAYGIMRSKKVQPDRVIFNALITACGQSGAVDRAFDVLAEM 1721
            TYGALIDGCA+AGQVAKAFGAYGIMRSK V+PDRV+FNALITACGQSGAVDRAFDVLAEM
Sbjct: 164  TYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM 223

Query: 1720 RAEPKPIDPDHVTIGALIKTCIQAGQVDRVPEVYRMLHMYNIRGTPEVYTIAVNSCSQTG 1541
             AE  P+DPDH+TIGAL+K C  AGQVDR  EVY+M+H YNI+GTPEVYTIA+N CSQTG
Sbjct: 224  NAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTG 283

Query: 1540 DLEFALSIYNDMKKNAIVPDEMFLSTLIDVAGHAGKVDTGFEILKNARSKGIRLGNVSYS 1361
            D EFA S+Y+DM K  ++PDE+FLS LID AGHAGKV+  FEIL+ A+++GI +G +SYS
Sbjct: 284  DWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYS 343

Query: 1360 SLMGACCNAKNWQKALELFEEIKAIKLLPTVSTLNALITSLCDGDQLLKSVEVLDEIKEA 1181
            SLMGAC NAKNWQKALEL+E +K+IKL PTVST+NALIT+LCDGD+L K++EVL ++K  
Sbjct: 344  SLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDRLPKTMEVLSDMKSL 403

Query: 1180 GVQPNIITYSILIVACEKKDEAELGFTLFSKAKKDGILPNLIICRCLTGLCLKSLEKAYS 1001
            G+ PN ITYSIL+VACE+KD+ E+G  L S+AK+DG++PNL++ +C+ G+C +  EKA +
Sbjct: 404  GLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKART 463

Query: 1000 LCEPIVTFNSGKPQIDSKWTSRAIMVYRETISAGVIPTIEVFSQVLGCLQFPHDSSLRNR 821
            L E +++FNSG+PQI++KWTS  +MVYRE I AG IPT+EV S+VLGCLQ P+++ +R R
Sbjct: 464  LNEHVLSFNSGRPQIENKWTSLVLMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRER 523

Query: 820  FVENLDLHIDASKCSNICSLLDGFGEYDTRCFSVFEEAASLGVVPRISFKDNPIVVDARK 641
             VENL +  DA K SN+CSL+DGFGEYD R FS+ EEAAS G+VP +SFK++P+VVDARK
Sbjct: 524  LVENLGVSADALKRSNLCSLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKESPVVVDARK 583

Query: 640  LLTHTVEVYLLTILKALKHRLAAGARLPNITVLLPIEKTQIESSSGERRTVNIAGRVGQA 461
            L  HT +VYLLTILK L+HRLAAGA+LPN+ +LLP+EKTQI S  GE +T++IA R  QA
Sbjct: 584  LEIHTAKVYLLTILKGLRHRLAAGAKLPNVNILLPVEKTQIMSVGGE-KTIDIAERTTQA 642

Query: 460  VGSLLRRLGVKYSGDESYGKIRINGLALRRWFKPKLSGFSVSGRPGDMASISTRLAKGIS 281
            + +LLRRLG+ Y G+ SYGKIRINGLAL+RWF+PKL+    SG+PG+++S+  +L K I+
Sbjct: 643  IAALLRRLGLPYQGNGSYGKIRINGLALKRWFQPKLAS-PFSGKPGELSSL--QLGKFIT 699

Query: 280  DQQRDIRSTNNLSLE 236
             QQR+IR T NLSLE
Sbjct: 700  HQQRNIR-TGNLSLE 713


>ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citrus clementina]
            gi|557525497|gb|ESR36803.1| hypothetical protein
            CICLE_v10027915mg [Citrus clementina]
          Length = 713

 Score =  953 bits (2464), Expect = 0.0
 Identities = 464/675 (68%), Positives = 572/675 (84%)
 Frame = -1

Query: 2260 CVDVLERMERKGLLDMDKVHHATFLKACKSQKAVKEAFQFCKLIPNPTLSTFNMLLSVCA 2081
            C+D+LE MERKGLLDMDKV+HA F   CKSQKA+KEAF F KL+PNPTLSTFNML+SVCA
Sbjct: 44   CIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFCFFKLVPNPTLSTFNMLMSVCA 103

Query: 2080 SSQDFDGAFQAMLIIKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVNAGVEPNVN 1901
            SS+D +GAFQ + +++EAGLK DCKLYTTLI+TCAK GKVDAMFEVFHEMVNAG+EPNV+
Sbjct: 104  SSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVH 163

Query: 1900 TYGALIDGCARAGQVAKAFGAYGIMRSKKVQPDRVIFNALITACGQSGAVDRAFDVLAEM 1721
            TYGALIDGCA+AGQVAKAFGAYGIMRSK V+PDRV+FNALITACGQSGAVDRAFDVLAEM
Sbjct: 164  TYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEM 223

Query: 1720 RAEPKPIDPDHVTIGALIKTCIQAGQVDRVPEVYRMLHMYNIRGTPEVYTIAVNSCSQTG 1541
             AE  P+DPDH+TIGAL+K C  AGQVDR  EVY+M+H YNI+GTPEVYTIA+N CSQTG
Sbjct: 224  NAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTG 283

Query: 1540 DLEFALSIYNDMKKNAIVPDEMFLSTLIDVAGHAGKVDTGFEILKNARSKGIRLGNVSYS 1361
            D EFA S+Y+DM K  ++PDE+FLS LID AGHAGKV+  FEIL+ A+++GI +G +SYS
Sbjct: 284  DWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYS 343

Query: 1360 SLMGACCNAKNWQKALELFEEIKAIKLLPTVSTLNALITSLCDGDQLLKSVEVLDEIKEA 1181
            SLMGAC NAKNWQKALEL+E +K+IKL PTVST+NALIT+LCDGDQL K++EVL ++K  
Sbjct: 344  SLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSL 403

Query: 1180 GVQPNIITYSILIVACEKKDEAELGFTLFSKAKKDGILPNLIICRCLTGLCLKSLEKAYS 1001
            G+ PN ITYSIL+VACE+KD+ E+G  L S+AK+DG++PNL++ +C+ G+C +  EKA +
Sbjct: 404  GLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKART 463

Query: 1000 LCEPIVTFNSGKPQIDSKWTSRAIMVYRETISAGVIPTIEVFSQVLGCLQFPHDSSLRNR 821
            L E +++FNSG+PQI++KWTS A+MVYRE I AG IPT+EV S+VLGCLQ P+++ +R R
Sbjct: 464  LNEHVLSFNSGRPQIENKWTSLALMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRER 523

Query: 820  FVENLDLHIDASKCSNICSLLDGFGEYDTRCFSVFEEAASLGVVPRISFKDNPIVVDARK 641
             VENL +  DA K SN+CSL+DGFGEYD R FS+ EEAAS G+VP +SFK+ P+VVDARK
Sbjct: 524  LVENLGVSADALKRSNLCSLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKEIPVVVDARK 583

Query: 640  LLTHTVEVYLLTILKALKHRLAAGARLPNITVLLPIEKTQIESSSGERRTVNIAGRVGQA 461
            L  HT +VYLLTILK L+HRLAAGA+LPN+ +LLP+EKTQI+S  GE +T++IA R  QA
Sbjct: 584  LEIHTAKVYLLTILKGLRHRLAAGAKLPNVNILLPVEKTQIKSVGGE-KTIDIAERTTQA 642

Query: 460  VGSLLRRLGVKYSGDESYGKIRINGLALRRWFKPKLSGFSVSGRPGDMASISTRLAKGIS 281
            + +LLRRLG+   G+ SYGKIRINGLAL+RWF+PKL+    SG+PG+++S+  +L K I+
Sbjct: 643  IAALLRRLGLPNQGNGSYGKIRINGLALKRWFQPKLAS-PFSGKPGELSSL--QLGKFIT 699

Query: 280  DQQRDIRSTNNLSLE 236
             QQR+IR T NLSLE
Sbjct: 700  HQQRNIR-TGNLSLE 713


>ref|XP_010088683.1| hypothetical protein L484_003235 [Morus notabilis]
            gi|587846355|gb|EXB36850.1| hypothetical protein
            L484_003235 [Morus notabilis]
          Length = 1125

 Score =  952 bits (2461), Expect = 0.0
 Identities = 551/1151 (47%), Positives = 731/1151 (63%), Gaps = 49/1151 (4%)
 Frame = -1

Query: 3541 MDVSITSKAQ--TLASSVPLSSQFHL-PS-----SIRREFLGCGTHLRPAG-LRSRTTKR 3389
            MDV  ++K Q  TL S  PLSS     PS     SIRREFLGCG +LRP G LRSR  +R
Sbjct: 1    MDVRFSAKPQILTLISCTPLSSSSSASPSRSSLRSIRREFLGCGHNLRPPGSLRSRGRQR 60

Query: 3388 KIGLRIHSPRCLLHNPLDENILXXXXXXATFATLQLIYINYSRWRRDAPKFSDDQKGDGM 3209
            K      S R L    L  + +       T +   ++Y N+ + +++A      ++  G 
Sbjct: 61   KPWSHSRSSRFLFRASLGSHPVLVVVAVVTVSAASVVYWNFFKSKKNA------REVPGP 114

Query: 3208 VGSELCEQDEDILEYEAVGNPLLSGEGLHIKPCEIENAFERIYQNMDYEKVHDSDAKDAK 3029
                L +   +++ +      L  G+   ++  E++    ++ ++ + E  H S  K A 
Sbjct: 115  ANFALPQMGGNVMNHVIQSQMLDFGD---VREMEVQ----QLLKDENRENSHASVEKQAP 167

Query: 3028 QLEFQKAVLAWEDNSVNEV--QTGYELAYSPRESELIKTNGCTGSSSTPVLVNEVKTVDG 2855
             L+F  A +  ++  V      +G  +  S   +            S   L++E   ++ 
Sbjct: 168  -LQFHNATVMNQETLVTSALQSSGSGVLVSGASNSTFLNESSVLDQSLSPLLSESAILEP 226

Query: 2854 GALAAKMPNLLSEK-EEDIAVSSCSVISAEKKSGESNQNNYEL-------GH-IATKHSD 2702
              L   +     +K  E+I  S     SA  +   S     E+       GH +A  H D
Sbjct: 227  LNLPESLNGFQLDKLREEIESSESLFGSASVQDNGSVHLQEEIVSKFKVNGHSVAELHED 286

Query: 2701 VL----------ISSYDGYLREPDEEV------SNCNDEKQPXXXXXXXXXXXXXXSHHF 2570
                        ++SY+  L E   +        N +DEK                 +  
Sbjct: 287  ETDKRRLGEEGEMTSYNFLLGESVRKELHMFYDENKSDEK---------GIGKINGHNSL 337

Query: 2569 DDNTVCYSHLKTALPDADILAKGSPPTA------------ETLIGSLKESPLSKEDELIK 2426
              N    +    +    D + KG   TA            +    S KE  L       +
Sbjct: 338  SPNASAPNSKTVSASLRDTIVKGGEATALFPPLKADNHESKIPFSSHKEGTLRSGKNSGQ 397

Query: 2425 GQGFTRDIGKTLVHKSNNGDFSSFPQQNGFR-RHVNGPAXXXXXXXXXXXXXXXXDCVDV 2249
            G+G++RD+ K  + ++N+   +   + NG      + P+                D V++
Sbjct: 398  GRGYSRDLIKGNLAQNNHKAPAKLTRLNGLDVEQKHHPSEQISTYNRLVKDGRLSDAVEL 457

Query: 2248 LERMERKGLLDMDKVHHATFLKACKSQKAVKEAFQFCKLIPNPTLSTFNMLLSVCASSQD 2069
            LE MER+GLLDM+KV+HA F K CK QKAV EAF++  LIP PTLST+NML+SVC SSQD
Sbjct: 458  LEDMERRGLLDMNKVYHAKFFKICKFQKAVNEAFRYVNLIPYPTLSTYNMLMSVCTSSQD 517

Query: 2068 FDGAFQAMLIIKEAGLKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVNAGVEPNVNTYGA 1889
             +GAF+ M +++EAGLK DCKLYTTLISTCAK GKVD+MFEVFH+MVN GVEPNV+TYG+
Sbjct: 518  PEGAFKVMQLVQEAGLKADCKLYTTLISTCAKSGKVDSMFEVFHKMVNDGVEPNVHTYGS 577

Query: 1888 LIDGCARAGQVAKAFGAYGIMRSKKVQPDRVIFNALITACGQSGAVDRAFDVLAEMRAEP 1709
            LIDGCARAGQVAKAFGAYGIMRSK V+PDRV+FNALITACGQSGAVDRAFDVLAEM AEP
Sbjct: 578  LIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMTAEP 637

Query: 1708 KPIDPDHVTIGALIKTCIQAGQVDRVPEVYRMLHMYNIRGTPEVYTIAVNSCSQTGDLEF 1529
            + IDPDH+T+GAL+K C  +GQVDR  EVY+M+H YN++GTPEVYTIAVN+ S  GD EF
Sbjct: 638  ELIDPDHITVGALMKACANSGQVDRAREVYKMVHQYNLKGTPEVYTIAVNTSSHMGDWEF 697

Query: 1528 ALSIYNDMKKNAIVPDEMFLSTLIDVAGHAGKVDTGFEILKNARSKGIRLGNVSYSSLMG 1349
            A ++Y+DM +  ++PDEMFLS LID AGHAGK+D  FEIL  A+++G++ G VSYSSLMG
Sbjct: 698  ARNVYDDMTRKGVLPDEMFLSALIDAAGHAGKLDAAFEILSEAKNRGVKFGTVSYSSLMG 757

Query: 1348 ACCNAKNWQKALELFEEIKAIKLLPTVSTLNALITSLCDGDQLLKSVEVLDEIKEAGVQP 1169
            AC NAKNWQKALEL+E++K+ K   TVST+NALIT+LCDGDQL K++EVL E+K  G+ P
Sbjct: 758  ACSNAKNWQKALELYEDLKSTKSEQTVSTVNALITALCDGDQLQKAMEVLSEMKALGLSP 817

Query: 1168 NIITYSILIVACEKKDEAELGFTLFSKAKKDGILPNLIICRCLTGLCLKSLEKAYSLCEP 989
            N ITYSIL+VA EKKD+ E+G  LFS+AKKDGI PNL++ RC+ G CL+  E A +L EP
Sbjct: 818  NSITYSILLVASEKKDDLEVGLVLFSQAKKDGISPNLLMSRCILGTCLRRYENASTLGEP 877

Query: 988  IVTFNSGKPQIDSKWTSRAIMVYRETISAGVIPTIEVFSQVLGCLQFPHDSSLRNRFVEN 809
            +++F+ G+PQ+ +KWTS A+MVYR+TI+AGV PTI+V SQVLGCLQ PHD SL+NR +EN
Sbjct: 878  VLSFDPGRPQVVNKWTSSALMVYRDTIAAGVTPTIDVLSQVLGCLQLPHDPSLKNRLIEN 937

Query: 808  LDLHIDASKCSNICSLLDGFGEYDTRCFSVFEEAASLGVVPRISFKDNPIVVDARKLLTH 629
            L + +D S+ SN+ SL+DGFGEYD R FS+ EEAAS G++  +SFK +P++VD R+L  H
Sbjct: 938  LAVSVDTSRPSNLSSLIDGFGEYDPRAFSLLEEAASFGIISCVSFKQSPVIVDTRELQIH 997

Query: 628  TVEVYLLTILKALKHRLAAGARLPNITVLLPIEKTQIESSSGERRTVNIAGRVGQAVGSL 449
            T EVYLLT+LK LK+RLAAGA+LP IT+LLP+EK Q+ +S  E +T+N+AGR+G+AV +L
Sbjct: 998  TAEVYLLTVLKGLKNRLAAGAKLPTITILLPVEKAQL-TSPKEEKTINLAGRIGRAVAAL 1056

Query: 448  LRRLGVKYSGDESYGKIRINGLALRRWFKPKLSGFSVSGRPGDMASISTRLAKGISDQQR 269
            LRRLG+ Y G ES+GKIRI GL L+RWFKPKL+    SGRP ++     RL K I+ QQR
Sbjct: 1057 LRRLGLPYQGHESHGKIRIYGLTLKRWFKPKLAS-PFSGRPEEINLSQFRLGKEIAHQQR 1115

Query: 268  DIRSTNNLSLE 236
            +IR T NLSL+
Sbjct: 1116 NIR-TGNLSLD 1125


>ref|XP_012442077.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic isoform X3 [Gossypium raimondii]
          Length = 998

 Score =  946 bits (2446), Expect = 0.0
 Identities = 510/955 (53%), Positives = 663/955 (69%), Gaps = 18/955 (1%)
 Frame = -1

Query: 3049 SDAKDAKQLEFQKAVLAWEDNSVNEVQTGYE---LAYSPRESELIKTNGCTGSSSTPVLV 2879
            +DA ++K++  Q+  +   D+ + +         LA++  +S++++ +G T     P ++
Sbjct: 54   NDASESKEVLLQETAVVNGDSMLTKASESNGADFLAFNANDSDVLEESGTTVLPLQPTVL 113

Query: 2878 NEVKTVDGGALAAKMPNLLSEKEEDIAVSSCSVISAEKKSGESNQNNYELGHIATKHSDV 2699
             E         A +   L  E+  +   +    ++ E KS  S+        +  + + V
Sbjct: 114  LESGAGQPFTFATQRSGLHLEERVNEFEADYPRLAVEPKSSASS--------VLVEDAVV 165

Query: 2698 LIS-----SYDGYLREPDEEVSNCNDEKQPXXXXXXXXXXXXXXSHHFDDNTVCYSHLKT 2534
            LI      +YD +     EE+    +                  SH    N+  +S LK 
Sbjct: 166  LIGEDKVRNYDIFRESGREELHTFYEADHLVAKSSSNLTLKPVSSHFLSSNSNKFSSLKL 225

Query: 2533 ALP---DADIL-AKGSPPTAETLIGSLKESPLS-----KEDELIKGQGFTRDIGKTLVHK 2381
             L    + D L AK S  TA+ + G + ++        K   L +G+   RD GK  + +
Sbjct: 226  KLNSELNKDALSAKNSLQTADMVEGKVTQANFQGGFSHKRKHLGRGRESPRDKGKKHLIQ 285

Query: 2380 SNNGDFSSFPQQNG-FRRHVNGPAXXXXXXXXXXXXXXXXDCVDVLERMERKGLLDMDKV 2204
              +   + FP  NG      + P                 D VD+LE ME+KGLLDMDKV
Sbjct: 286  EKDTKLAQFPFPNGELANDKHHPEEYLSYYNHLLRCGRLSDSVDLLEDMEQKGLLDMDKV 345

Query: 2203 HHATFLKACKSQKAVKEAFQFCKLIPNPTLSTFNMLLSVCASSQDFDGAFQAMLIIKEAG 2024
            +HA F K C  QKAVKEAF+F KLI NPTLSTFNML+SVC  S+D +GAFQ + +++EAG
Sbjct: 346  YHAKFFKICSKQKAVKEAFRFTKLIANPTLSTFNMLMSVCGCSKDSEGAFQVLRLVQEAG 405

Query: 2023 LKPDCKLYTTLISTCAKCGKVDAMFEVFHEMVNAGVEPNVNTYGALIDGCARAGQVAKAF 1844
             + DC LYTTLISTCAK GKVD MFEVFHEMVN+GVEPNVNTYGALIDGCARAGQV KAF
Sbjct: 406  FQADCILYTTLISTCAKSGKVDTMFEVFHEMVNSGVEPNVNTYGALIDGCARAGQVPKAF 465

Query: 1843 GAYGIMRSKKVQPDRVIFNALITACGQSGAVDRAFDVLAEMRAEPKPIDPDHVTIGALIK 1664
            GAYGIMRSK V+PDRV+FNALITACGQSGAVDRAFDVLAEM AE +PIDPDH+T+GALIK
Sbjct: 466  GAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMMAETQPIDPDHITVGALIK 525

Query: 1663 TCIQAGQVDRVPEVYRMLHMYNIRGTPEVYTIAVNSCSQTGDLEFALSIYNDMKKNAIVP 1484
             C  AGQV+R  EVY+M+H +NIRGTPEVYTIAVN CSQTGD EFA  +YNDMKK  + P
Sbjct: 526  ACSNAGQVERAREVYKMMHKFNIRGTPEVYTIAVNCCSQTGDWEFACGVYNDMKKKGVAP 585

Query: 1483 DEMFLSTLIDVAGHAGKVDTGFEILKNARSKGIRLGNVSYSSLMGACCNAKNWQKALELF 1304
            DE+F+S LIDVAGHAGK+D  FE+L+ A++ GI  G VSYSSLMGAC NA+NWQKALEL+
Sbjct: 586  DEVFISALIDVAGHAGKLDAAFELLQEAKNHGINSGIVSYSSLMGACSNARNWQKALELY 645

Query: 1303 EEIKAIKLLPTVSTLNALITSLCDGDQLLKSVEVLDEIKEAGVQPNIITYSILIVACEKK 1124
            E IKA+KL  TVST+NALITSLC+ +QL K++EVL E++E+G+ PNIITYSIL+VA E+ 
Sbjct: 646  ENIKALKLKLTVSTVNALITSLCEANQLPKAMEVLSEMEESGLSPNIITYSILLVASERN 705

Query: 1123 DEAELGFTLFSKAKKDGILPNLIICRCLTGLCLKSLEKAYSLCEPIVTFNSGKPQIDSKW 944
             + E+G  L SKA+ DGI PNL++ RC+ G+CL+   KA ++ EP+++FNSG+P I++KW
Sbjct: 706  GDLEVGLMLLSKARDDGIAPNLVMSRCIIGMCLRRFVKACAVGEPVLSFNSGRPHIENKW 765

Query: 943  TSRAIMVYRETISAGVIPTIEVFSQVLGCLQFPHDSSLRNRFVENLDLHIDASKCSNICS 764
             S A+ VYRETI AG +PT+EV S++LGCLQ P D SLR+R VENL++  D S+ S++ S
Sbjct: 766  MSVALTVYRETIDAGTVPTMEVVSKILGCLQLPRDDSLRSRLVENLEVIADPSRSSSLGS 825

Query: 763  LLDGFGEYDTRCFSVFEEAASLGVVPRISFKDNPIVVDARKLLTHTVEVYLLTILKALKH 584
            L+DGFGEYD R FS+ EEAAS G+VP +SFK++PIVVDAR+L  +T EVYLLTILK LKH
Sbjct: 826  LIDGFGEYDPRAFSLLEEAASFGIVPCVSFKESPIVVDARELQINTAEVYLLTILKGLKH 885

Query: 583  RLAAGARLPNITVLLPIEKTQIESSSGERRTVNIAGRVGQAVGSLLRRLGVKYSGDESYG 404
            RLAAGA+LP+I++LLP+EK QI +S GE +++N+AGR+GQA+ +LLRR+ + Y G+ESYG
Sbjct: 886  RLAAGAKLPSISILLPLEKAQILTSGGE-KSINVAGRMGQAIAALLRRIKLPYQGNESYG 944

Query: 403  KIRINGLALRRWFKPKLSGFSVSGRPGDMASISTRLAKGISDQQRDIRSTNNLSL 239
            KIRINGLALR+WF+PKL+    +G+PG+  +   RL KGIS QQR+IR T NLSL
Sbjct: 945  KIRINGLALRKWFQPKLAS-PFTGKPGEWNASQMRLGKGISHQQRNIR-TGNLSL 997