BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00002824
         (4356 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010913855.1| PREDICTED: U5 small nuclear ribonucleoprotei...  2420   0.0  
ref|XP_008811841.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc...  2411   0.0  
ref|XP_009394408.1| PREDICTED: U5 small nuclear ribonucleoprotei...  2407   0.0  
ref|XP_010270595.1| PREDICTED: U5 small nuclear ribonucleoprotei...  2296   0.0  
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420...  2295   0.0  
ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase,...  2284   0.0  
ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase,...  2284   0.0  
ref|XP_012073544.1| PREDICTED: U5 small nuclear ribonucleoprotei...  2281   0.0  
gb|KHG18677.1| U5 small nuclear ribonucleoprotein helicase [Goss...  2270   0.0  
ref|XP_008653400.1| PREDICTED: U5 small nuclear ribonucleoprotei...  2269   0.0  
gb|EEE56150.1| hypothetical protein OsJ_05035 [Oryza sativa Japo...  2269   0.0  
ref|XP_002463258.1| hypothetical protein SORBIDRAFT_02g040700 [S...  2269   0.0  
gb|KJB73065.1| hypothetical protein B456_011G217300 [Gossypium r...  2268   0.0  
ref|XP_012454175.1| PREDICTED: U5 small nuclear ribonucleoprotei...  2268   0.0  
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...  2268   0.0  
ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotei...  2268   0.0  
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]  2268   0.0  
ref|XP_012703060.1| PREDICTED: U5 small nuclear ribonucleoprotei...  2266   0.0  
gb|EAY84119.1| hypothetical protein OsI_05501 [Oryza sativa Indi...  2266   0.0  
gb|AES66243.2| U5 small nuclear ribonucleoprotein 200 kDa helica...  2261   0.0  

>ref|XP_010913855.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Elaeis guineensis] gi|743767199|ref|XP_010913856.1|
            PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa
            helicase-like [Elaeis guineensis]
          Length = 2173

 Score = 2420 bits (6271), Expect = 0.0
 Identities = 1205/1355 (88%), Positives = 1265/1355 (93%), Gaps = 2/1355 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            LVE+LFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR
Sbjct: 823  LVEELFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 882

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE
Sbjct: 883  AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 942

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAA+ILD+NNLVKYDRK
Sbjct: 943  ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAANILDRNNLVKYDRK 1002

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            SGYFQVTDLGRIASYYYITHGTISTYNEYLKPT GDIEL RLFSLSEEFKYV+VRQDEKM
Sbjct: 1003 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTMGDIELCRLFSLSEEFKYVTVRQDEKM 1062

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIPVKES+EEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL
Sbjct: 1063 ELAKLLDRVPIPVKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 1122

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIVLKRGWAQLAEKALNLCKMVDKR+WSVQTPLRQF GIPNEILMKLEKKDL WERYYD
Sbjct: 1123 FEIVLKRGWAQLAEKALNLCKMVDKRMWSVQTPLRQFSGIPNEILMKLEKKDLAWERYYD 1182

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQEIGELIRY KMGRQLHK IHQLPK+NLAAHVQPITRTVLGFELTITPDFQWDD VH
Sbjct: 1183 LSSQEIGELIRYPKMGRQLHKFIHQLPKLNLAAHVQPITRTVLGFELTITPDFQWDDTVH 1242

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            GYVEPFW+IVEDNDGEYILHHEYF+LKKQYI+EDH L+FTVPIYEPLPPQYFIRVVSDRW
Sbjct: 1243 GYVEPFWIIVEDNDGEYILHHEYFMLKKQYIDEDHFLSFTVPIYEPLPPQYFIRVVSDRW 1302

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNP YE LY +FKHFNPIQTQVF
Sbjct: 1303 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPLYEALYDTFKHFNPIQTQVF 1362

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGLEN-MRAVYIAPIEALAKERYREWK 2560
            TVLYNTDDNVLVAAPTGSGKTIC EFALLRNHQK  E  MRAVYIAPIEALAKERYR+W+
Sbjct: 1363 TVLYNTDDNVLVAAPTGSGKTICAEFALLRNHQKASEGVMRAVYIAPIEALAKERYRDWE 1422

Query: 2559 EKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVD 2380
            EKFG+ LGI +VELTGETA DLK LE+G IIISTPEKWDALSRRWKQRKH+QQVSLFIVD
Sbjct: 1423 EKFGKRLGIRLVELTGETATDLKLLERGQIIISTPEKWDALSRRWKQRKHIQQVSLFIVD 1482

Query: 2379 ELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF 2200
            ELHLIGG+IGPVLE+IVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF
Sbjct: 1483 ELHLIGGEIGPVLEVIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF 1542

Query: 2199 PPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTA 2020
            PPGVRPVPLEIHIQGVDI NFE RMQAM KPTYTAIVQHAKNGKPALVFVPTRKHARLTA
Sbjct: 1543 PPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNGKPALVFVPTRKHARLTA 1602

Query: 2019 VDLCTYSTSDT-DKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDVV 1843
            +DLCTYS++++ +KP F            S IKDDTLK TLPLGVGYLHEGL+ +DQ+VV
Sbjct: 1603 LDLCTYSSAESGEKPLFLLGSEMEMMTFISGIKDDTLKETLPLGVGYLHEGLSDFDQEVV 1662

Query: 1842 LNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHAS 1663
              LF+ GRIQVCV+SSSMCWG+ +PAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHAS
Sbjct: 1663 TQLFLSGRIQVCVASSSMCWGRSLPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHAS 1722

Query: 1662 RPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAV 1483
            RPL+DNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVV V+ENKQDAV
Sbjct: 1723 RPLIDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVEVIENKQDAV 1782

Query: 1482 DYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLKP 1303
            DYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENAL+DLESSKCV +EEDMYLKP
Sbjct: 1783 DYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALNDLESSKCVLVEEDMYLKP 1842

Query: 1302 LNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLI 1123
             NLGLIA         IERFSSSLT KTKMKGLL+ILASASEYA LPIRPGEEELIRKLI
Sbjct: 1843 HNLGLIASYYYISYTTIERFSSSLTPKTKMKGLLEILASASEYAHLPIRPGEEELIRKLI 1902

Query: 1122 NHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVISS 943
            NHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVISS
Sbjct: 1903 NHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVISS 1962

Query: 942  NGWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXXX 763
            NGWL LALS ME+SQMVTQGMWERD MLLQLPHFTKELAKRCQENPGRSIETVF      
Sbjct: 1963 NGWLSLALSAMEVSQMVTQGMWERDSMLLQLPHFTKELAKRCQENPGRSIETVFDLVEME 2022

Query: 762  XXXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQT 583
                   LQMSDSQL +IA+FCNRFPNIDM+YEVLDSDD+R G+N+TLQVTLER+LEG  
Sbjct: 2023 DDERRDLLQMSDSQLLDIARFCNRFPNIDMTYEVLDSDDVRPGKNITLQVTLERDLEG-- 2080

Query: 582  QSEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKKS 403
            +SEVG V APR+PK KEEGWWLVVGD+ TNQLLAI+RVSLQR++K KLVF+AP+EVG+K+
Sbjct: 2081 RSEVGPVDAPRYPKPKEEGWWLVVGDSTTNQLLAIRRVSLQRKAKAKLVFTAPSEVGRKT 2140

Query: 402  YMIYFMCDSYLGCDQEYSFTIDVKEGGEGDGARSD 298
            Y IYFMCDSYLGCDQEY+FT+DV +   GDG RSD
Sbjct: 2141 YTIYFMCDSYLGCDQEYNFTVDVNDA--GDGGRSD 2173



 Score =  305 bits (781), Expect = 2e-79
 Identities = 208/699 (29%), Positives = 350/699 (50%), Gaps = 16/699 (2%)
 Frame = -1

Query: 2859 YPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSG 2680
            + P  EL+ +  +P  A   P +E +    K  N +Q++V+     + +N+L+ APTG+G
Sbjct: 483  FAPGEELVKISAMPDWA--QPAFEGM----KQLNRVQSKVYETALFSPENILLCAPTGAG 536

Query: 2679 KTICGEFALLR----NHQKGL---ENMRAVYIAPIEALAKERYREWKEKFGQGLGINVVE 2521
            KT      +L+    N + G+      + VY+AP++AL  E       +  +   I V E
Sbjct: 537  KTNVAMLTILQQIGLNRKDGVLDNNKYKIVYVAPMKALVAEVVGNLSNRL-KSYNIVVKE 595

Query: 2520 LTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVDELHLIGGQIGPVL 2341
            L+G+     + +E+  II++TPEKWD ++R+   R + Q V L I+DE+HL+    GPVL
Sbjct: 596  LSGDQTLTRQQIEETQIIVTTPEKWDIVTRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVL 655

Query: 2340 EIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIH 2164
            E IV+R  R       +IR+V LSA+L N +D+  ++      GLF+F  G RP PL   
Sbjct: 656  ESIVARTVRQIETTKEHIRLVGLSATLPNYEDVALFLRVDPKKGLFHFDNGYRPCPLAQQ 715

Query: 2163 IQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTAVDLCTYSTSDTD 1984
              G+ +     R Q M +  Y  ++  A   +  L+FV +RK    TA  +   + ++  
Sbjct: 716  YIGITVKKPLQRFQLMNEICYEKVMAAAGKHQ-VLIFVHSRKETAKTARAIRDAALANDT 774

Query: 1983 KPSFXXXXXXXXXXXXSA---IKDDTLKRTLPLGVGYLHEGLNSYDQDVVLNLFVGGRIQ 1813
               F            S    +K + LK  LP G    H G+   D+D+V  LF  G +Q
Sbjct: 775  LGRFLKDDSASREILHSQTELVKSNDLKDLLPYGFAIHHAGMARVDRDLVEELFADGHVQ 834

Query: 1812 VCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHASRPLVDNSGKC 1633
            V VS++++ WG  +PAH V++ GTQ Y+  + A T+    D++QM+G A RP  D+ G+ 
Sbjct: 835  VLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEG 894

Query: 1632 VILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAVDYLTWTFMYR 1453
            +IL      +YY   + +  P+ES     L D LNAE+V+G V+N ++A  ++ +T++Y 
Sbjct: 895  IILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACTWIGYTYLYI 954

Query: 1452 RLTKNPNYYNLQG---VSHRHLSDHLSDLVENALSDLESSKCVAIE-EDMYLKPLNLGLI 1285
            R+ +NP  Y L        + L +  +DL+ +A + L+ +  V  + +  Y +  +LG I
Sbjct: 955  RMLRNPTLYGLPADILDRDKTLEERRADLIHSAANILDRNNLVKYDRKSGYFQVTDLGRI 1014

Query: 1284 AXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLINHQRFS 1105
            A         I  ++  L        L  + + + E+  + +R  E+  + KL++     
Sbjct: 1015 ASYYYITHGTISTYNEYLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIP 1074

Query: 1104 FENPKCTDPHVKANALLQAHFSRHTVVG-NLAADQREVLLSAHRLLQAMVDVISSNGWLG 928
             +     +P  K N LLQA+ S+  + G +L +D   +  SA RLL+A+ +++   GW  
Sbjct: 1075 VKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRALFEIVLKRGWAQ 1133

Query: 927  LALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQE 811
            LA   + L +MV + MW     L Q      E+  + ++
Sbjct: 1134 LAEKALNLCKMVDKRMWSVQTPLRQFSGIPNEILMKLEK 1172


>ref|XP_008811841.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
            200 kDa helicase-like [Phoenix dactylifera]
          Length = 2174

 Score = 2411 bits (6249), Expect = 0.0
 Identities = 1198/1355 (88%), Positives = 1268/1355 (93%), Gaps = 2/1355 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            LVE+LFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR
Sbjct: 824  LVEELFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 883

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE
Sbjct: 884  AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 943

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAA++LDKNNL KYDRK
Sbjct: 944  ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAANVLDKNNLTKYDRK 1003

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            SGYFQVTDLGRIASYYYITHGTISTYNEYLKPT GDIEL RLFSLSEEFKYV+VRQDEKM
Sbjct: 1004 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTMGDIELCRLFSLSEEFKYVTVRQDEKM 1063

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIPVKES+EEPSAKINVLLQAYISQLKL+GLSLTSDMVFIRQSAGRLLRAL
Sbjct: 1064 ELAKLLDRVPIPVKESLEEPSAKINVLLQAYISQLKLDGLSLTSDMVFIRQSAGRLLRAL 1123

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIVLKRGWAQLAEKALNLCKMV+KR+WSVQTPLRQF GIPNEILMKLEKKDL WERYYD
Sbjct: 1124 FEIVLKRGWAQLAEKALNLCKMVNKRMWSVQTPLRQFSGIPNEILMKLEKKDLAWERYYD 1183

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQEIGELIRY KMGRQLHK IHQLPK+NLAAHVQPITRTVLGFELTITPDFQWDDKVH
Sbjct: 1184 LSSQEIGELIRYPKMGRQLHKFIHQLPKLNLAAHVQPITRTVLGFELTITPDFQWDDKVH 1243

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            GYVEPFW+IVEDNDGEYILHHEYF+LKKQYI+EDH L+FTVPIYEPLPPQYFIRVVSD+W
Sbjct: 1244 GYVEPFWIIVEDNDGEYILHHEYFMLKKQYIDEDHFLSFTVPIYEPLPPQYFIRVVSDKW 1303

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNP YE LY +FKHFNPIQTQVF
Sbjct: 1304 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEALYDTFKHFNPIQTQVF 1363

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGLEN-MRAVYIAPIEALAKERYREWK 2560
            TVLYNTDDNVLVAAPTGSGKTIC EFALLRNHQK  E  MRAVYIAPIEALAKERYR+W+
Sbjct: 1364 TVLYNTDDNVLVAAPTGSGKTICAEFALLRNHQKASEGVMRAVYIAPIEALAKERYRDWE 1423

Query: 2559 EKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVD 2380
            EKFG+ LGI +VELTGE A DLK LE+G IIISTPEKWDALSRRWKQRKH+QQVSLFIVD
Sbjct: 1424 EKFGKRLGIRLVELTGEPATDLKLLERGQIIISTPEKWDALSRRWKQRKHIQQVSLFIVD 1483

Query: 2379 ELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF 2200
            ELHLIGG+IGPVLE+IVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF
Sbjct: 1484 ELHLIGGEIGPVLEVIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF 1543

Query: 2199 PPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTA 2020
            PPGVRPVPLEIHIQGVDI NFE RMQAM KPTYTAIVQHAKNGKPALVFVPTRKHARLTA
Sbjct: 1544 PPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNGKPALVFVPTRKHARLTA 1603

Query: 2019 VDLCTYSTSDT-DKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDVV 1843
            +DLCTYS++++ +KP F            S IKDD+LK TLPLGVGYLHEGL+ +DQ+VV
Sbjct: 1604 LDLCTYSSAESGEKPLFLLGSEMEMTTFISGIKDDSLKDTLPLGVGYLHEGLSDFDQEVV 1663

Query: 1842 LNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHAS 1663
              LF+ GRIQVCV+SSS+CWG+ +PAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHAS
Sbjct: 1664 TQLFLSGRIQVCVASSSLCWGRSLPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHAS 1723

Query: 1662 RPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAV 1483
            RPL+DNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGV+ENKQDAV
Sbjct: 1724 RPLIDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVMENKQDAV 1783

Query: 1482 DYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLKP 1303
            DYLTWTFMYRRL KNPNYYNLQGVSHRHLSDHLS+LVENAL+DLESSKCVA+EEDMYLKP
Sbjct: 1784 DYLTWTFMYRRLNKNPNYYNLQGVSHRHLSDHLSELVENALNDLESSKCVAVEEDMYLKP 1843

Query: 1302 LNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLI 1123
            LNLGLIA         IERFSSSLT KTKMKGLL+ILASASEYA+LPIRPGEEELIRKLI
Sbjct: 1844 LNLGLIASYYYISYTTIERFSSSLTPKTKMKGLLEILASASEYAQLPIRPGEEELIRKLI 1903

Query: 1122 NHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVISS 943
            NHQRFSFENPKCTDPHVKANALLQAHFSRHTV GNLAADQREVLLSAHRLLQAMVDVISS
Sbjct: 1904 NHQRFSFENPKCTDPHVKANALLQAHFSRHTVXGNLAADQREVLLSAHRLLQAMVDVISS 1963

Query: 942  NGWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXXX 763
            NGWL LALS ME+SQMVTQGMWERD MLLQLPHFTKELAKRCQENPGRSIETVF      
Sbjct: 1964 NGWLSLALSAMEVSQMVTQGMWERDSMLLQLPHFTKELAKRCQENPGRSIETVFDLVEME 2023

Query: 762  XXXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQT 583
                   LQMSDSQL +IA+FCNRFPNIDM+YEVLDS+D+R G+++TLQVTLER+LEG  
Sbjct: 2024 DDERRELLQMSDSQLLDIARFCNRFPNIDMTYEVLDSEDVRPGKDITLQVTLERDLEG-- 2081

Query: 582  QSEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKKS 403
            +SEVG V APR+PK KEEGWWLVVGD+ TNQLLAIKRVSLQR++KVKLVF+AP+EVG+++
Sbjct: 2082 RSEVGSVDAPRYPKSKEEGWWLVVGDS-TNQLLAIKRVSLQRKAKVKLVFTAPSEVGRRT 2140

Query: 402  YMIYFMCDSYLGCDQEYSFTIDVKEGGEGDGARSD 298
            Y IYFMCDSYLGCDQEY+FT+D+ + G GDG RSD
Sbjct: 2141 YTIYFMCDSYLGCDQEYNFTVDIDDAG-GDGGRSD 2174



 Score =  303 bits (775), Expect = 1e-78
 Identities = 206/699 (29%), Positives = 349/699 (49%), Gaps = 16/699 (2%)
 Frame = -1

Query: 2859 YPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSG 2680
            + P  EL+ +  +P  A   P +E +    K  N +Q++V+     + +N+L+ APTG+G
Sbjct: 484  FAPGEELVKISAMPDWA--QPAFEGM----KQLNRVQSKVYETALFSPENLLLCAPTGAG 537

Query: 2679 KTICGEFALLR----NHQKGL---ENMRAVYIAPIEALAKERYREWKEKFGQGLGINVVE 2521
            KT      +L+    N + G+      + VY+AP++AL  E       +  +   + V E
Sbjct: 538  KTNVAMLTILQQIGLNRKDGVLDNSKYKIVYVAPMKALVAEVVGNLSHRL-KSYNVVVKE 596

Query: 2520 LTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVDELHLIGGQIGPVL 2341
            L+G+     + +E+  II++TPEKWD ++R+   R + Q V L I+DE+HL+    GPVL
Sbjct: 597  LSGDQTLTRQQIEETQIIVTTPEKWDIVTRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVL 656

Query: 2340 EIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIH 2164
            E IV+R  R       +IR+V LSA+L N +D+G ++      GLF+F    RP PL   
Sbjct: 657  ESIVARTVRQIETTKEHIRLVGLSATLPNYEDVGLFLRVDPKKGLFHFDNSYRPCPLAQQ 716

Query: 2163 IQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTAVDLCTYSTSDTD 1984
              G+ +     R Q M +  Y  ++  A   +  L+FV +RK    TA  +   + ++  
Sbjct: 717  YIGITVKKPLQRFQLMNEICYEKVMAAAGKHQ-VLIFVHSRKETAKTARAIRDTALANDT 775

Query: 1983 KPSFXXXXXXXXXXXXSA---IKDDTLKRTLPLGVGYLHEGLNSYDQDVVLNLFVGGRIQ 1813
               F            S    +K + LK  LP G    H G+   D+D+V  LF  G +Q
Sbjct: 776  LGRFLKDDSASREILHSQTEFVKSNDLKDLLPYGFAIHHAGMARVDRDLVEELFADGHVQ 835

Query: 1812 VCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHASRPLVDNSGKC 1633
            V VS++++ WG  +PAH V++ GTQ Y+  + A T+    D++QM+G A RP  D+ G+ 
Sbjct: 836  VLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEG 895

Query: 1632 VILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAVDYLTWTFMYR 1453
            +IL      +YY   + +  P+ES     L D LNAE+V+G V+N ++A  ++ +T++Y 
Sbjct: 896  IILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACTWIGYTYLYI 955

Query: 1452 RLTKNPNYYNLQG---VSHRHLSDHLSDLVENALSDLESSKCVAIE-EDMYLKPLNLGLI 1285
            R+ +NP  Y L        + L +  +DL+ +A + L+ +     + +  Y +  +LG I
Sbjct: 956  RMLRNPTLYGLPADILDRDKTLEERRADLIHSAANVLDKNNLTKYDRKSGYFQVTDLGRI 1015

Query: 1284 AXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLINHQRFS 1105
            A         I  ++  L        L  + + + E+  + +R  E+  + KL++     
Sbjct: 1016 ASYYYITHGTISTYNEYLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIP 1075

Query: 1104 FENPKCTDPHVKANALLQAHFSRHTVVG-NLAADQREVLLSAHRLLQAMVDVISSNGWLG 928
             +     +P  K N LLQA+ S+  + G +L +D   +  SA RLL+A+ +++   GW  
Sbjct: 1076 VKE-SLEEPSAKINVLLQAYISQLKLDGLSLTSDMVFIRQSAGRLLRALFEIVLKRGWAQ 1134

Query: 927  LALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQE 811
            LA   + L +MV + MW     L Q      E+  + ++
Sbjct: 1135 LAEKALNLCKMVNKRMWSVQTPLRQFSGIPNEILMKLEK 1173


>ref|XP_009394408.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Musa acuminata subsp. malaccensis]
            gi|695015109|ref|XP_009394409.1| PREDICTED: U5 small
            nuclear ribonucleoprotein 200 kDa helicase-like [Musa
            acuminata subsp. malaccensis]
          Length = 2172

 Score = 2407 bits (6237), Expect = 0.0
 Identities = 1198/1355 (88%), Positives = 1262/1355 (93%), Gaps = 2/1355 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            LVE+LF+DGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR
Sbjct: 821  LVEELFSDGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 880

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE
Sbjct: 881  AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 940

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            AC WIGYTYLY+RM+RNPTLYGL ADIL+RDK LEERRADLIH+AA+ILDKNNLVKYDRK
Sbjct: 941  ACNWIGYTYLYVRMVRNPTLYGLSADILERDKLLEERRADLIHTAANILDKNNLVKYDRK 1000

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            SGYFQ TDLGRIASYYYITHGTISTYNEYLKPT GDIELFRLFSLSEEFKYV+VRQDEKM
Sbjct: 1001 SGYFQATDLGRIASYYYITHGTISTYNEYLKPTMGDIELFRLFSLSEEFKYVTVRQDEKM 1060

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIPVKES+EEPSAKINVLLQAYISQLKLEGLSLTSDMVFI+QSAGRL+R+L
Sbjct: 1061 ELAKLLDRVPIPVKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIKQSAGRLIRSL 1120

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIVLKRGWAQLAEKALNLCKMVDKR+WSVQTPLRQF GIPNEILMKLEKKDL WERYYD
Sbjct: 1121 FEIVLKRGWAQLAEKALNLCKMVDKRMWSVQTPLRQFTGIPNEILMKLEKKDLSWERYYD 1180

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQEIGELIRY KMGRQLHKCIHQLPK+NL AHVQPITRTVLGFELTITPDFQWDD VH
Sbjct: 1181 LSSQEIGELIRYPKMGRQLHKCIHQLPKLNLLAHVQPITRTVLGFELTITPDFQWDDAVH 1240

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            GYVEPFWVIVEDNDGEYILHHEYF+LKKQYI+EDHTLNFTVPIYEPLPPQYFIRVVSD+W
Sbjct: 1241 GYVEPFWVIVEDNDGEYILHHEYFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKW 1300

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQTVLPVCFRHLILPEKYPP TELLDLQPLPVTALRNP YE LY +FKHFNPIQTQVF
Sbjct: 1301 LGSQTVLPVCFRHLILPEKYPPATELLDLQPLPVTALRNPAYEALYDAFKHFNPIQTQVF 1360

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGLEN-MRAVYIAPIEALAKERYREWK 2560
            TVLYNTDDNVLVAAPTGSGKTIC EFALLRNHQKG ++ MRAVYIAPIEA+AKERYR+W+
Sbjct: 1361 TVLYNTDDNVLVAAPTGSGKTICAEFALLRNHQKGPDSIMRAVYIAPIEAVAKERYRDWE 1420

Query: 2559 EKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVD 2380
            EKFG+ LGI VVELTGETA DLK LE+G IIISTPEKWDALSRRWKQRK VQQVSLFIVD
Sbjct: 1421 EKFGKRLGIRVVELTGETATDLKLLERGQIIISTPEKWDALSRRWKQRKQVQQVSLFIVD 1480

Query: 2379 ELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF 2200
            ELHLIGG++GP+LEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF
Sbjct: 1481 ELHLIGGEMGPILEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF 1540

Query: 2199 PPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTA 2020
            PPGVRPVPLEIHIQGVDI NFE RMQAM KPTYTAIVQH+KNGKPALVFVPTRKHARLTA
Sbjct: 1541 PPGVRPVPLEIHIQGVDISNFEARMQAMTKPTYTAIVQHSKNGKPALVFVPTRKHARLTA 1600

Query: 2019 VDLCTYSTSDT-DKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDVV 1843
            +DLCTYS +D  ++PSF            S IKDDTLK TL LGVGYLHEGLN +DQ+VV
Sbjct: 1601 LDLCTYSHADRGERPSFLLGSGEEMNTFISGIKDDTLKGTLALGVGYLHEGLNEFDQEVV 1660

Query: 1842 LNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHAS 1663
            + LF+GGRIQVCV++S MCWG+ +P+HLVVVMGTQYYDGRENAHTDYPITDLLQMMGHAS
Sbjct: 1661 IQLFLGGRIQVCVATSLMCWGRSLPSHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHAS 1720

Query: 1662 RPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAV 1483
            RPL DNSG CVILCHAPRKEYYKKFLYEAFPVESHLH+FLHDH+NAEVVVGV ENKQDAV
Sbjct: 1721 RPLKDNSGICVILCHAPRKEYYKKFLYEAFPVESHLHNFLHDHMNAEVVVGVTENKQDAV 1780

Query: 1482 DYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLKP 1303
            DYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLS+LVEN LSDLESSKCVAIEEDMYLKP
Sbjct: 1781 DYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSELVENVLSDLESSKCVAIEEDMYLKP 1840

Query: 1302 LNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLI 1123
            LNLGLIA         IERFSSSLT KTKMKGLLDILASASEY++LPIRPGEEELIRKLI
Sbjct: 1841 LNLGLIASYYYISYTTIERFSSSLTSKTKMKGLLDILASASEYSQLPIRPGEEELIRKLI 1900

Query: 1122 NHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVISS 943
            NHQRFSFENPKCTDPHVKAN LLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVISS
Sbjct: 1901 NHQRFSFENPKCTDPHVKANVLLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVISS 1960

Query: 942  NGWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXXX 763
            NGWL LALSTMELSQMVTQGMWERD MLLQ+PHFTKELAKRCQENPGRSIETVF      
Sbjct: 1961 NGWLSLALSTMELSQMVTQGMWERDSMLLQIPHFTKELAKRCQENPGRSIETVFDLVEME 2020

Query: 762  XXXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQT 583
                   LQM DSQL +IA+FCNRFPNIDM+YEVLD DD+R GENVTLQVTLER+LEG  
Sbjct: 2021 DDERRDLLQMLDSQLLDIARFCNRFPNIDMTYEVLDDDDVRPGENVTLQVTLERDLEG-- 2078

Query: 582  QSEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKKS 403
            ++EVG V APR+PK KEEGWWLVVGDTG NQLLAIKRV+LQR++KVKLVF+AP EVGKK+
Sbjct: 2079 RAEVGPVDAPRYPKAKEEGWWLVVGDTGNNQLLAIKRVALQRKAKVKLVFTAPAEVGKKA 2138

Query: 402  YMIYFMCDSYLGCDQEYSFTIDVKEGGEGDGARSD 298
            + IYFMCDSYLGCDQEY+F IDVKEGGE DG RSD
Sbjct: 2139 FTIYFMCDSYLGCDQEYNFNIDVKEGGE-DGNRSD 2172



 Score =  307 bits (787), Expect = 4e-80
 Identities = 209/704 (29%), Positives = 350/704 (49%), Gaps = 18/704 (2%)
 Frame = -1

Query: 2868 PEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVFTVLYNTDDNVLVAAPT 2689
            P+ + P  +L+ +  LP  A   P +E +    K  N +Q+ V+   + + +N+L+ APT
Sbjct: 478  PKTFSPEEKLVKISDLPDWA--QPAFEGM----KQLNRVQSMVYKTAFTSPENILLCAPT 531

Query: 2688 GSGKTICGEFALLRNHQKGLENM---------RAVYIAPIEALAKERYREWKEKFGQGLG 2536
            G+GKT     A+L  HQ GL            + VY+AP++AL  E       +  +   
Sbjct: 532  GAGKTNVAMLAIL--HQIGLHRRDGVLDNSKYKIVYVAPMKALVAEVVGNLSHRL-KSYN 588

Query: 2535 INVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVDELHLIGGQ 2356
            I V EL+G+     + +E+  II++TPEKWD ++R+   R + Q V L I+DE+HL+   
Sbjct: 589  IVVRELSGDQNLTRQQIEETQIIVTTPEKWDIVTRKSGDRTYTQLVKLLIIDEIHLLHDN 648

Query: 2355 IGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATS-HGLFNFPPGVRPV 2179
             GPVLE IV+R  R        IR+V LSA+L N +D+  ++  T   G+ +F    RP 
Sbjct: 649  RGPVLESIVARTLRQTEATKELIRLVGLSATLPNYEDVALFLRVTKPSGILHFDNSYRPC 708

Query: 2178 PLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTAVDLCTYS 1999
            PL     G+ I     R Q M +  Y  ++  A   +  L+FV +RK    TA  +   +
Sbjct: 709  PLAQQYIGITIKKPLQRFQLMNEICYEKVMAAAGKHQ-VLIFVHSRKETAKTARAIRDTA 767

Query: 1998 TSDTDKPSFXXXXXXXXXXXXSA---IKDDTLKRTLPLGVGYLHEGLNSYDQDVVLNLFV 1828
             ++     F            S    +K + LK  LP G    H G+   D+D+V  LF 
Sbjct: 768  LANDTLSRFLKDDSASREILQSQTEFVKSNDLKDLLPYGFAIHHAGMARVDRDLVEELFS 827

Query: 1827 GGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHASRPLVD 1648
             G +QV VS++++ WG  +PAH V++ GTQ Y+  + A T+    D++QM+G A RP  D
Sbjct: 828  DGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYD 887

Query: 1647 NSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAVDYLTW 1468
            + G+ +IL      +YY   + +  P+ES     L D LNAE+V+G V+N ++A +++ +
Sbjct: 888  SYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIGY 947

Query: 1467 TFMYRRLTKNPNYYNLQG---VSHRHLSDHLSDLVENALSDLESSKCVAIE-EDMYLKPL 1300
            T++Y R+ +NP  Y L        + L +  +DL+  A + L+ +  V  + +  Y +  
Sbjct: 948  TYLYVRMVRNPTLYGLSADILERDKLLEERRADLIHTAANILDKNNLVKYDRKSGYFQAT 1007

Query: 1299 NLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLIN 1120
            +LG IA         I  ++  L        L  + + + E+  + +R  E+  + KL++
Sbjct: 1008 DLGRIASYYYITHGTISTYNEYLKPTMGDIELFRLFSLSEEFKYVTVRQDEKMELAKLLD 1067

Query: 1119 HQRFSFENPKCTDPHVKANALLQAHFSRHTVVG-NLAADQREVLLSAHRLLQAMVDVISS 943
                  +     +P  K N LLQA+ S+  + G +L +D   +  SA RL++++ +++  
Sbjct: 1068 RVPIPVKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIKQSAGRLIRSLFEIVLK 1126

Query: 942  NGWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQE 811
             GW  LA   + L +MV + MW     L Q      E+  + ++
Sbjct: 1127 RGWAQLAEKALNLCKMVDKRMWSVQTPLRQFTGIPNEILMKLEK 1170


>ref|XP_010270595.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Nelumbo nucifera] gi|720046748|ref|XP_010270596.1|
            PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa
            helicase-like [Nelumbo nucifera]
          Length = 2177

 Score = 2296 bits (5951), Expect = 0.0
 Identities = 1146/1351 (84%), Positives = 1225/1351 (90%), Gaps = 2/1351 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKG WTELSPLDVMQMLGR
Sbjct: 827  LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGVWTELSPLDVMQMLGR 886

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQF+SKLADQLNAEIVLGTVQNA+E
Sbjct: 887  AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAKE 946

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            AC WIGYTYLY+RM+RNPTLYGL  D+L RD TLEERRADLIHSAA+ILD+NNL+KYDRK
Sbjct: 947  ACYWIGYTYLYVRMVRNPTLYGLAPDVLTRDITLEERRADLIHSAATILDRNNLIKYDRK 1006

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            SGYFQVTDLGRIASYYYITHGTISTYNE+LKPT GDIEL RLFSLSEEFKYV+VRQDEKM
Sbjct: 1007 SGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKM 1066

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIP+KES+EEPSAKINVLLQAYISQLKLEGLSLTSDMVFI QSAGRLLRAL
Sbjct: 1067 ELAKLLDRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRAL 1126

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIV+KRGWAQLAEKALNLCKMV+KR+WSVQTPLRQF+GIPNEILMKLEKKDL WERYYD
Sbjct: 1127 FEIVVKRGWAQLAEKALNLCKMVNKRMWSVQTPLRQFNGIPNEILMKLEKKDLAWERYYD 1186

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQEIGELIR+ KMGR LHK IHQ PK+NLAAHVQPITRTVL  EL ITPDFQW+DKVH
Sbjct: 1187 LSSQEIGELIRFPKMGRTLHKFIHQFPKLNLAAHVQPITRTVLRVELMITPDFQWEDKVH 1246

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            GYVEPFWVIVEDNDGEYILHHEYF+LKKQYI+EDHTLNF VPIYEPLPPQYFIRVVSDRW
Sbjct: 1247 GYVEPFWVIVEDNDGEYILHHEYFMLKKQYIDEDHTLNFIVPIYEPLPPQYFIRVVSDRW 1306

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQTVLPV FRHLILPEKYPPPTELLDLQPLPVTALRNP YE LY  FKHFNPIQTQVF
Sbjct: 1307 LGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEALYQEFKHFNPIQTQVF 1366

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGLEN-MRAVYIAPIEALAKERYREWK 2560
            TVLYNTDDNVLVAAPTGSGKTIC EFA+LRNHQKG E+ MRAVYIAPIEALAKER R+W+
Sbjct: 1367 TVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPESTMRAVYIAPIEALAKERCRDWE 1426

Query: 2559 EKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVD 2380
             KFG+GLG+ VVEL GETA DLK LEKG IIISTPEKWDALSRRWKQRKHVQQVSLFI+D
Sbjct: 1427 RKFGKGLGMRVVELIGETATDLKLLEKGQIIISTPEKWDALSRRWKQRKHVQQVSLFIID 1486

Query: 2379 ELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF 2200
            ELHLIGG  GPVLE+IVSRMR IAS   + IRIVALS SLANAKDLGEWIGATSHGLFNF
Sbjct: 1487 ELHLIGGLGGPVLEVIVSRMRYIASQGENKIRIVALSTSLANAKDLGEWIGATSHGLFNF 1546

Query: 2199 PPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTA 2020
            PPGVRPVPLEIHIQGVDI NFE RMQAM KPTYTAIVQHAKNGKPALVFVPTRKHARLTA
Sbjct: 1547 PPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNGKPALVFVPTRKHARLTA 1606

Query: 2019 VDLCTYSTSDT-DKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDVV 1843
            VDL TYS+ D+ +KP+F            S +K+  L  TL  GVGYLHEGL+S DQ+VV
Sbjct: 1607 VDLMTYSSVDSGEKPAFLLRPVEELEPFISKVKEPMLSETLRHGVGYLHEGLSSIDQEVV 1666

Query: 1842 LNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHAS 1663
             +LF  G IQVCV+SSSMCWG P+ AHLVVVMGTQYYDGRENAHTDYP+TDLLQMMGHAS
Sbjct: 1667 SHLFEAGWIQVCVASSSMCWGMPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHAS 1726

Query: 1662 RPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAV 1483
            RPL+DNSGKCVILCHAPRKEYYKKFLYEAFPVESHL H+LHD+LNAE+VVGV+ENKQDAV
Sbjct: 1727 RPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLQHYLHDNLNAEIVVGVIENKQDAV 1786

Query: 1482 DYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLKP 1303
            DYLTWTFMYRRLT+NPNYYNLQGVSHRHLSDHLS+LVEN L+DLE+SKCV IE++M L P
Sbjct: 1787 DYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLTDLEASKCVTIEDEMDLSP 1846

Query: 1302 LNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLI 1123
            LNLG+IA         IERFSSSLT KTKMKGLLDILASASEYA+LPIRPGEEE IR+LI
Sbjct: 1847 LNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLDILASASEYAQLPIRPGEEESIRRLI 1906

Query: 1122 NHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVISS 943
            NHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLA+DQREVLLSA RLLQAMVDVISS
Sbjct: 1907 NHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLASDQREVLLSASRLLQAMVDVISS 1966

Query: 942  NGWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXXX 763
            NGWL LAL  ME+SQMVTQGMWERD MLLQLPHFTKELAK+CQENPG+SIETVF      
Sbjct: 1967 NGWLSLALLAMEVSQMVTQGMWERDSMLLQLPHFTKELAKKCQENPGKSIETVFDLVEME 2026

Query: 762  XXXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQT 583
                   LQMSDSQL +IA+FCNRFPNIDM+YEV++SD +R G++VTL VTLER+LEG  
Sbjct: 2027 DDERRELLQMSDSQLLDIARFCNRFPNIDMTYEVMESDSVRAGDDVTLLVTLERDLEG-- 2084

Query: 582  QSEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKKS 403
            +SEVG V APR+PK KEEGWWLVVGDT TNQLLAIKRVSLQR+SKVKL FSAP+E G+KS
Sbjct: 2085 RSEVGPVDAPRYPKAKEEGWWLVVGDTKTNQLLAIKRVSLQRKSKVKLEFSAPSEAGRKS 2144

Query: 402  YMIYFMCDSYLGCDQEYSFTIDVKEGGEGDG 310
            Y +YFMCDSYLGCDQEYSF+I+     + DG
Sbjct: 2145 YTLYFMCDSYLGCDQEYSFSIEAGAADDDDG 2175



 Score =  298 bits (764), Expect = 2e-77
 Identities = 207/703 (29%), Positives = 346/703 (49%), Gaps = 17/703 (2%)
 Frame = -1

Query: 2868 PEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVFTVLYNTDDNVLVAAPT 2689
            P+   P  EL+ +  +P  A      +  +      N +Q++V+     T +N+L+ APT
Sbjct: 483  PKPLAPGEELIKISVMPDWA------QPAFKGMTQLNRVQSKVYETALFTAENILLCAPT 536

Query: 2688 GSGKT------ICGEFALLRNHQKGLE--NMRAVYIAPIEALAKERYREWKEKFGQGLGI 2533
            G+GKT      I  + AL RN        N + VY+AP++AL  E     + +      +
Sbjct: 537  GAGKTNVAMLTILQQIALHRNPDGSFNHSNYKIVYVAPMKALVAEVVGNLQNRLHH-YDV 595

Query: 2532 NVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVDELHLIGGQI 2353
             V EL+G+     + +E+  II++TPEKWD ++R+   R + Q V L I+DE+HL+    
Sbjct: 596  KVKELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNR 655

Query: 2352 GPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSH-GLFNFPPGVRPVP 2176
            GPVLE IV+R  R       +IR+V LSA+L N +D+  ++      GLF+F    RP P
Sbjct: 656  GPVLESIVARTVRQIETTKEHIRLVGLSATLPNYEDVALFLRVDREKGLFHFDNSYRPCP 715

Query: 2175 LEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTAVDLCTYST 1996
            L     G+ +     R Q M    Y  ++  A   +  L+FV +RK    TA  +   + 
Sbjct: 716  LAQQYIGITVKKPLQRFQLMNDICYEKVMAVAGKHQ-VLIFVHSRKETAKTARAIRDTAL 774

Query: 1995 SDTDKPSFXXXXXXXXXXXXS---AIKDDTLKRTLPLGVGYLHEGLNSYDQDVVLNLFVG 1825
            ++     F            S    +K + LK  LP G    H G+   D+ +V +LF  
Sbjct: 775  ANDTLGRFLKEDSASREILHSHTELVKSNDLKDLLPYGFAIHHAGMARVDRQLVEDLFAD 834

Query: 1824 GRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHASRPLVDN 1645
            G +QV VS++++ WG  +PAH V++ GTQ Y+  +   T+    D++QM+G A RP  D+
Sbjct: 835  GHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGVWTELSPLDVMQMLGRAGRPQYDS 894

Query: 1644 SGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAVDYLTWT 1465
             G+ +IL      +YY   + +  P+ES     L D LNAE+V+G V+N ++A  ++ +T
Sbjct: 895  YGEGIILTGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAKEACYWIGYT 954

Query: 1464 FMYRRLTKNPNYYNL-QGVSHRH--LSDHLSDLVENALSDLESSKCVAIE-EDMYLKPLN 1297
            ++Y R+ +NP  Y L   V  R   L +  +DL+ +A + L+ +  +  + +  Y +  +
Sbjct: 955  YLYVRMVRNPTLYGLAPDVLTRDITLEERRADLIHSAATILDRNNLIKYDRKSGYFQVTD 1014

Query: 1296 LGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLINH 1117
            LG IA         I  ++  L        L  + + + E+  + +R  E+  + KL++ 
Sbjct: 1015 LGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDR 1074

Query: 1116 QRFSFENPKCTDPHVKANALLQAHFSRHTVVG-NLAADQREVLLSAHRLLQAMVDVISSN 940
                 +     +P  K N LLQA+ S+  + G +L +D   +  SA RLL+A+ +++   
Sbjct: 1075 VPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVVKR 1133

Query: 939  GWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQE 811
            GW  LA   + L +MV + MW     L Q      E+  + ++
Sbjct: 1134 GWAQLAEKALNLCKMVNKRMWSVQTPLRQFNGIPNEILMKLEK 1176


>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
            putative [Ricinus communis]
          Length = 1809

 Score = 2295 bits (5946), Expect = 0.0
 Identities = 1134/1350 (84%), Positives = 1228/1350 (90%), Gaps = 2/1350 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR
Sbjct: 460  LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 519

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQYDSYGEGII+TGH+ELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE
Sbjct: 520  AGRPQYDSYGEGIIITGHTELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 579

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            AC W+GYTYLYIRMLRNPTLYGL  D+L RD TLEERRADLIHS+A+ILDKNNLVKYDRK
Sbjct: 580  ACNWLGYTYLYIRMLRNPTLYGLAPDVLTRDITLEERRADLIHSSATILDKNNLVKYDRK 639

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            SGYFQVTDLGRIASYYYITHGTISTYNE+LKPT GDIEL RLFSLSEEFKYV+VRQDEKM
Sbjct: 640  SGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKM 699

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIP+KES+EEPSAKINVLLQAYISQLKLEGLSLTSDMVFI QSAGRLLRAL
Sbjct: 700  ELAKLLDRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRAL 759

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIVLKRGWAQL EKALNLCKM++KR+WSVQTPLRQF+GIPNEILMKLEKKDL WERYYD
Sbjct: 760  FEIVLKRGWAQLTEKALNLCKMINKRMWSVQTPLRQFNGIPNEILMKLEKKDLAWERYYD 819

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQEIGELIR+ KMGR LHK IHQ PK+NLAAHVQPITRTVL  ELTITPDFQW+DKVH
Sbjct: 820  LSSQEIGELIRFPKMGRTLHKFIHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVH 879

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            GYVEPFWVIVEDNDGEYILHHEYF+LKKQYI+EDHTLNFTVPIYEPLPPQYFIRVVSD+W
Sbjct: 880  GYVEPFWVIVEDNDGEYILHHEYFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKW 939

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQTVLPV FRHLILPEKYPPPTELLDLQPLPVTALRNP YE LY  FKHFNP+QTQVF
Sbjct: 940  LGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVF 999

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGLENM-RAVYIAPIEALAKERYREWK 2560
            TVLYNTDDNVLVAAPTGSGKTIC EFA+LRNHQKG +++ RAVYIAP+EA+AKERYR+W+
Sbjct: 1000 TVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPDSVTRAVYIAPLEAIAKERYRDWE 1059

Query: 2559 EKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVD 2380
             KFG+GLG+ VVELTGETA DLK LEK  IIISTPEKWDALSRRWKQRK+VQQVSLFI+D
Sbjct: 1060 RKFGRGLGMRVVELTGETATDLKLLEKSQIIISTPEKWDALSRRWKQRKYVQQVSLFIID 1119

Query: 2379 ELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF 2200
            ELHLIGGQ GP+LE+IVSRMR IAS I + IRIVALS+SLANAKDLGEWIGATSHGLFNF
Sbjct: 1120 ELHLIGGQGGPILEVIVSRMRYIASQIENKIRIVALSSSLANAKDLGEWIGATSHGLFNF 1179

Query: 2199 PPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTA 2020
            PPGVRPVPLEIHIQGVDI NFE RMQAM KPTYTAIVQHAKNGKPA+VFVPTRKH RLTA
Sbjct: 1180 PPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNGKPAIVFVPTRKHVRLTA 1239

Query: 2019 VDLCTYSTSDT-DKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDVV 1843
            VDL TYS++D+ +KP+F              ++D+ L+ TL  GVGYLHEGL+S DQ+VV
Sbjct: 1240 VDLMTYSSADSGEKPAFMMRSIEELEPFVGRVQDEMLRSTLRQGVGYLHEGLSSLDQEVV 1299

Query: 1842 LNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHAS 1663
              LF  G IQVCV SSSMCWG P+ AHLVVVMGTQYYDGRENAHTDYP+TDLLQMMGHAS
Sbjct: 1300 SQLFEAGWIQVCVMSSSMCWGVPLAAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHAS 1359

Query: 1662 RPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAV 1483
            RPL+DNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHD+ NAEVV GV+ENKQDAV
Sbjct: 1360 RPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNFNAEVVAGVIENKQDAV 1419

Query: 1482 DYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLKP 1303
            DYLTWTFMYRRLT+NPNYYNLQGVSHRHLSDHLS+LVEN LSDLE+SKCVAIEEDM L P
Sbjct: 1420 DYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDLEASKCVAIEEDMDLSP 1479

Query: 1302 LNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLI 1123
            LNLG+IA         IERFSSSLT KT+MKGLL+ILASASEYA+LPIRPGEEE++R+LI
Sbjct: 1480 LNLGMIASYYYISYTTIERFSSSLTSKTRMKGLLEILASASEYAQLPIRPGEEEVLRRLI 1539

Query: 1122 NHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVISS 943
            NHQRFSFENP+ +DPHVKAN LLQAHFSRH+V GNLA DQREVLLS+ RLLQAMVDVISS
Sbjct: 1540 NHQRFSFENPRYSDPHVKANVLLQAHFSRHSVGGNLALDQREVLLSSSRLLQAMVDVISS 1599

Query: 942  NGWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXXX 763
            NGWL LAL  ME+SQMVTQGMWERD MLLQLPHFTKELAK+CQENPG+SIETVF      
Sbjct: 1600 NGWLSLALLAMEVSQMVTQGMWERDSMLLQLPHFTKELAKKCQENPGKSIETVFDLVEME 1659

Query: 762  XXXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQT 583
                   LQMS+S+L ++ +FCNRFPNIDMSYEV+D +D+R+G+++TLQVTLER+LEG+T
Sbjct: 1660 DDERRELLQMSNSELLDVVRFCNRFPNIDMSYEVMDGEDVRMGDDITLQVTLERDLEGRT 1719

Query: 582  QSEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKKS 403
              EVG V A R+PK KEEGWWLVVGDT +NQLLAIKRVSLQR+SKVKL F+AP+E G+KS
Sbjct: 1720 --EVGPVDAARYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKSKVKLEFAAPSETGRKS 1777

Query: 402  YMIYFMCDSYLGCDQEYSFTIDVKEGGEGD 313
            Y +YFMCDSYLGCDQEYSF +DVKE G  D
Sbjct: 1778 YTLYFMCDSYLGCDQEYSFNVDVKEAGGPD 1807



 Score =  301 bits (772), Expect = 2e-78
 Identities = 231/827 (27%), Positives = 392/827 (47%), Gaps = 22/827 (2%)
 Frame = -1

Query: 2781 YGSFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKT------ICGEFALLRNHQKGLEN- 2623
            +   +  N +Q++V+       DNVL+ APTG+GKT      I  +  L  N + G  N 
Sbjct: 138  FKGMQQLNRVQSRVYETALFKADNVLLCAPTGAGKTNVAVLTILQQLGLKMNKEDGSFNH 197

Query: 2622 --MRAVYIAPIEALAKERYREWKEKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEK 2449
               + VY+AP++AL  E       +  Q  G+ V EL+G+ +   + +E+  II++TPEK
Sbjct: 198  SDYKIVYVAPMKALVAEVVGNLSNRL-QEYGVKVRELSGDQSLTRQQIEETQIIVTTPEK 256

Query: 2448 WDALSRRWKQRKHVQQVSLFIVDELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALS 2269
            WD ++R+   R + Q V L I+DE+HL+    GPVLE IV+R  R       +IR+V LS
Sbjct: 257  WDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGLS 316

Query: 2268 ASLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAI 2092
            A+L N +D+  ++      GLF+F    RPVPL     G+ +     R Q M    Y  +
Sbjct: 317  ATLPNYEDVALFLRVDLKKGLFHFDNSYRPVPLSQQYIGITVKKPLQRFQLMNDICYEKV 376

Query: 2091 VQHAKNGKPALVFVPTRKHARLTAVDLCTYSTSDTDKPSFXXXXXXXXXXXXS---AIKD 1921
            +  A   +  L+FV +RK    TA  +   + ++     F            S    +K 
Sbjct: 377  MAVAGKHQ-VLIFVHSRKETAKTARAIRDSALANDTLGRFLKEDSASREILQSHTDMVKS 435

Query: 1920 DTLKRTLPLGVGYLHEGLNSYDQDVVLNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGT 1741
            + LK  LP G    H G+   D+ +V +LF  G +QV VS++++ WG  +PAH V++ GT
Sbjct: 436  NDLKDLLPYGFAIHHAGMTRADRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGT 495

Query: 1740 QYYDGRENAHTDYPITDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVES 1561
            Q Y+  + A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+ES
Sbjct: 496  QIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHTELQYYLSLMNQQLPIES 555

Query: 1560 HLHHFLHDHLNAEVVVGVVENKQDAVDYLTWTFMYRRLTKNPNYYNL-QGVSHRH--LSD 1390
                 L D LNAE+V+G V+N ++A ++L +T++Y R+ +NP  Y L   V  R   L +
Sbjct: 556  QFVSKLADQLNAEIVLGTVQNAREACNWLGYTYLYIRMLRNPTLYGLAPDVLTRDITLEE 615

Query: 1389 HLSDLVENALSDLESSKCVAIE-EDMYLKPLNLGLIAXXXXXXXXXIERFSSSLTQKTKM 1213
              +DL+ ++ + L+ +  V  + +  Y +  +LG IA         I  ++  L      
Sbjct: 616  RRADLIHSSATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGD 675

Query: 1212 KGLLDILASASEYAELPIRPGEEELIRKLINHQRFSFENPKCTDPHVKANALLQAHFSRH 1033
              L  + + + E+  + +R  E+  + KL++      +     +P  K N LLQA+ S+ 
Sbjct: 676  IELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQL 734

Query: 1032 TVVG-NLAADQREVLLSAHRLLQAMVDVISSNGWLGLALSTMELSQMVTQGMWERDPMLL 856
             + G +L +D   +  SA RLL+A+ +++   GW  L    + L +M+ + MW     L 
Sbjct: 735  KLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLTEKALNLCKMINKRMWSVQTPLR 794

Query: 855  QLPHFTKELAKRCQENPGRSIETVFXXXXXXXXXXXXXLQMSDSQLSEIAQFCNRFPNID 676
            Q      E+  +  E    + E  +              +M  +    + +F ++FP ++
Sbjct: 795  QFNGIPNEILMKL-EKKDLAWERYYDLSSQEIGELIRFPKMGRT----LHKFIHQFPKLN 849

Query: 675  MSYEVLDSDDIRLGENVTLQVTLERELEGQTQSEVGRVYAPRFPKQKEEGWWLVVGDTGT 496
            ++  V      R    V L +T + + E +    V             E +W++V D   
Sbjct: 850  LAAHV--QPITRTVLRVELTITPDFQWEDKVHGYV-------------EPFWVIVEDNDG 894

Query: 495  NQLLAIKRVSLQRR---SKVKLVFSAPT-EVGKKSYMIYFMCDSYLG 367
              +L  +   L+++       L F+ P  E     Y I  + D +LG
Sbjct: 895  EYILHHEYFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLG 941


>ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 2
            [Theobroma cacao] gi|508727828|gb|EOY19725.1| U5 small
            nuclear ribonucleoprotein helicase, putative isoform 2
            [Theobroma cacao]
          Length = 2062

 Score = 2284 bits (5920), Expect = 0.0
 Identities = 1121/1349 (83%), Positives = 1223/1349 (90%), Gaps = 1/1349 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            +VE+LFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIY+PEKGAWTELSPLDVMQMLGR
Sbjct: 710  IVEELFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYSPEKGAWTELSPLDVMQMLGR 769

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQYDSYGEGII+TGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE
Sbjct: 770  AGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 829

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            AC WI YTYLY+RMLRNPTLYGLPAD+L RD TL+ERRADLIHSAA+ILDKNNLVKYDRK
Sbjct: 830  ACNWITYTYLYVRMLRNPTLYGLPADVLSRDLTLDERRADLIHSAATILDKNNLVKYDRK 889

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            SGYFQVTDLGRIASYYYITHGTISTYNE+LKPT GDIEL+RLFSLSEEFKYV+VRQDEKM
Sbjct: 890  SGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELYRLFSLSEEFKYVTVRQDEKM 949

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIP+KES+EEPSAKINVLLQAYISQLKLEGLSLTSDMV+I QSAGRLLRAL
Sbjct: 950  ELAKLLDRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLLRAL 1009

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIVLKRGWAQLAEKALNLCKMV KR+W+VQTPLRQFHGIPNEILMKLEKKDL W+RYYD
Sbjct: 1010 FEIVLKRGWAQLAEKALNLCKMVTKRMWNVQTPLRQFHGIPNEILMKLEKKDLAWDRYYD 1069

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQEIGELIR+QKMGR LH+ IHQ PK+NLAAHVQPITRTVL  ELTITPDFQW+DKVH
Sbjct: 1070 LSSQEIGELIRFQKMGRTLHRFIHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVH 1129

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            GYVEPFWVIVEDNDGEY+LHHEYF+LKKQYI+EDHTLNFTVPIYEPLPPQYFIRVVSD+W
Sbjct: 1130 GYVEPFWVIVEDNDGEYVLHHEYFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKW 1189

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQT+LPV FRHLILPEKYPPPTELLDLQPLPVTALRNP YE LY  FKHFNP+QTQVF
Sbjct: 1190 LGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVF 1249

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGLEN-MRAVYIAPIEALAKERYREWK 2560
            TVLYNTDDNVLVAAPTGSGKTIC EFA+LRNHQKG ++ MR VYIAP+EA+AKERYR+W+
Sbjct: 1250 TVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPDSIMRVVYIAPLEAIAKERYRDWE 1309

Query: 2559 EKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVD 2380
            +KFG+GLG+ VVELTGET+ DLK LEKG I+ISTPEKWDALSRRWKQRK+VQQVS+FIVD
Sbjct: 1310 KKFGRGLGMRVVELTGETSMDLKLLEKGQIVISTPEKWDALSRRWKQRKYVQQVSVFIVD 1369

Query: 2379 ELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF 2200
            ELHLIGGQ GPVLE+IVSRMR IAS + + IRIVALS SLANAKDLGEWIGATSHGLFNF
Sbjct: 1370 ELHLIGGQGGPVLEVIVSRMRYIASQVENKIRIVALSTSLANAKDLGEWIGATSHGLFNF 1429

Query: 2199 PPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTA 2020
            PPGVRPVPLEIHIQGVDI NFE RMQAM KPTYTA+VQHAKNGKPA+VFVPTRKH RLTA
Sbjct: 1430 PPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAVVQHAKNGKPAIVFVPTRKHVRLTA 1489

Query: 2019 VDLCTYSTSDTDKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDVVL 1840
            VDL +YS  D ++P+F              I ++TL+ TL  GVGYLHEGLNS DQ+VV 
Sbjct: 1490 VDLMSYSKVDNEEPAFRLRSAEELKPFVDKISEETLRTTLEHGVGYLHEGLNSLDQEVVS 1549

Query: 1839 NLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHASR 1660
             LF  G IQVCV SSS+CWG P+ AHLVVVMGTQYYDGRENAHTDYP+TDLLQMMGHASR
Sbjct: 1550 QLFEAGWIQVCVMSSSLCWGVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASR 1609

Query: 1659 PLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAVD 1480
            PL+DNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHD+ NAE+V  V+ENKQDAVD
Sbjct: 1610 PLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNFNAEIVALVIENKQDAVD 1669

Query: 1479 YLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLKPL 1300
            YLTWTFMYRRLT+NPNYYNLQGVSHRHLSDHLS+LVEN L+DLE+SKC+ IE+DM L PL
Sbjct: 1670 YLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLTDLEASKCITIEDDMDLSPL 1729

Query: 1299 NLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLIN 1120
            NLG+IA         IERFSSSLT KTKMKGLL+ILASASEYA+LPIRPGEE+++R+LIN
Sbjct: 1730 NLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEYAQLPIRPGEEDVLRRLIN 1789

Query: 1119 HQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVISSN 940
            HQRFSFENP+CTDPHVKANALLQAHF+R  V GNLA DQREVLL A RLLQAMVDVISSN
Sbjct: 1790 HQRFSFENPRCTDPHVKANALLQAHFTRQHVGGNLALDQREVLLYATRLLQAMVDVISSN 1849

Query: 939  GWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXXXX 760
            GWL LAL  ME+SQMVTQGMWERD MLLQLPHFTK+LAKRCQENPG++IET+F       
Sbjct: 1850 GWLSLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKRCQENPGKNIETIFDLVEMED 1909

Query: 759  XXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQTQ 580
                  LQMSD QL +IA+FCNRFPNID+SY+VL+ +++R GENVTLQVTLER+LEG+T 
Sbjct: 1910 DERRELLQMSDLQLLDIAKFCNRFPNIDLSYDVLEGENVRAGENVTLQVTLERDLEGRT- 1968

Query: 579  SEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKKSY 400
             EVG V APR+PK KEEGWWLVVG+T +NQLLAIKRVSLQR++KVKL F+APTE  KK+Y
Sbjct: 1969 -EVGPVDAPRYPKAKEEGWWLVVGETRSNQLLAIKRVSLQRKAKVKLEFAAPTEAAKKAY 2027

Query: 399  MIYFMCDSYLGCDQEYSFTIDVKEGGEGD 313
             +YFMCDSYLGCDQEY+FT+D KE    D
Sbjct: 2028 TLYFMCDSYLGCDQEYNFTVDAKEAAGPD 2056



 Score =  308 bits (788), Expect = 3e-80
 Identities = 208/709 (29%), Positives = 353/709 (49%), Gaps = 19/709 (2%)
 Frame = -1

Query: 2880 HLILPEKYPPPTE--LLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVFTVLYNTDDNV 2707
            H+  P+  P  ++  L+ +  +P  A      +  +   +  N +Q++V+       DN+
Sbjct: 360  HVPAPKSKPLESDERLVKISEMPEWA------QPAFKGMQQLNRVQSKVYETALFAADNI 413

Query: 2706 LVAAPTGSGKTICGEFALLRNHQKGLE--------NMRAVYIAPIEALAKERYREWKEKF 2551
            L+ APTG+GKT      +L+     ++        N + VY+AP++AL  E       + 
Sbjct: 414  LLCAPTGAGKTNVAVLTILQQLALNMDSDGSINHSNYKIVYVAPMKALVAEVVGNLSHRL 473

Query: 2550 GQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVDELH 2371
             +  G+ V EL+G+     + +++  II++TPEKWD ++R+   R + Q V L I+DE+H
Sbjct: 474  -EAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIH 532

Query: 2370 LIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGAT-SHGLFNFPP 2194
            L+    GPVLE IV+R  R       +IR+V LSA+L N +D+  ++      GLF+F  
Sbjct: 533  LLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSATLPNYEDVALFLRVDLKEGLFHFDN 592

Query: 2193 GVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTAVD 2014
              RPVPL     G+ +     R Q M    Y  ++  A   +  L+FV +RK    TA  
Sbjct: 593  SYRPVPLSQQYIGITVKKPLQRFQLMNDICYEKVMAVAGKHQ-VLIFVHSRKETTKTARA 651

Query: 2013 LCTYSTSDTDKPSFXXXXXXXXXXXXS---AIKDDTLKRTLPLGVGYLHEGLNSYDQDVV 1843
            +   + ++     F            S    +K + LK  LP G    H GL   D+ +V
Sbjct: 652  VRDTALANDTLSRFLKEDAASREILQSHTDMVKSNDLKDLLPYGFAIHHAGLARTDRQIV 711

Query: 1842 LNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHAS 1663
              LF  G +QV VS++++ WG  +PAH V++ GTQ Y   + A T+    D++QM+G A 
Sbjct: 712  EELFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYSPEKGAWTELSPLDVMQMLGRAG 771

Query: 1662 RPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAV 1483
            RP  D+ G+ +I+      +YY   + +  P+ES     L D LNAE+V+G V+N ++A 
Sbjct: 772  RPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREAC 831

Query: 1482 DYLTWTFMYRRLTKNPNYYNLQG-VSHRHLS--DHLSDLVENALSDLESSKCVAIE-EDM 1315
            +++T+T++Y R+ +NP  Y L   V  R L+  +  +DL+ +A + L+ +  V  + +  
Sbjct: 832  NWITYTYLYVRMLRNPTLYGLPADVLSRDLTLDERRADLIHSAATILDKNNLVKYDRKSG 891

Query: 1314 YLKPLNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELI 1135
            Y +  +LG IA         I  ++  L        L  + + + E+  + +R  E+  +
Sbjct: 892  YFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELYRLFSLSEEFKYVTVRQDEKMEL 951

Query: 1134 RKLINHQRFSFENPKCTDPHVKANALLQAHFSRHTVVG-NLAADQREVLLSAHRLLQAMV 958
             KL++      +     +P  K N LLQA+ S+  + G +L +D   +  SA RLL+A+ 
Sbjct: 952  AKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLLRALF 1010

Query: 957  DVISSNGWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQE 811
            +++   GW  LA   + L +MVT+ MW     L Q      E+  + ++
Sbjct: 1011 EIVLKRGWAQLAEKALNLCKMVTKRMWNVQTPLRQFHGIPNEILMKLEK 1059


>ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 1
            [Theobroma cacao] gi|508727827|gb|EOY19724.1| U5 small
            nuclear ribonucleoprotein helicase, putative isoform 1
            [Theobroma cacao]
          Length = 2176

 Score = 2284 bits (5920), Expect = 0.0
 Identities = 1121/1349 (83%), Positives = 1223/1349 (90%), Gaps = 1/1349 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            +VE+LFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIY+PEKGAWTELSPLDVMQMLGR
Sbjct: 824  IVEELFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYSPEKGAWTELSPLDVMQMLGR 883

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQYDSYGEGII+TGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE
Sbjct: 884  AGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 943

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            AC WI YTYLY+RMLRNPTLYGLPAD+L RD TL+ERRADLIHSAA+ILDKNNLVKYDRK
Sbjct: 944  ACNWITYTYLYVRMLRNPTLYGLPADVLSRDLTLDERRADLIHSAATILDKNNLVKYDRK 1003

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            SGYFQVTDLGRIASYYYITHGTISTYNE+LKPT GDIEL+RLFSLSEEFKYV+VRQDEKM
Sbjct: 1004 SGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELYRLFSLSEEFKYVTVRQDEKM 1063

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIP+KES+EEPSAKINVLLQAYISQLKLEGLSLTSDMV+I QSAGRLLRAL
Sbjct: 1064 ELAKLLDRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLLRAL 1123

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIVLKRGWAQLAEKALNLCKMV KR+W+VQTPLRQFHGIPNEILMKLEKKDL W+RYYD
Sbjct: 1124 FEIVLKRGWAQLAEKALNLCKMVTKRMWNVQTPLRQFHGIPNEILMKLEKKDLAWDRYYD 1183

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQEIGELIR+QKMGR LH+ IHQ PK+NLAAHVQPITRTVL  ELTITPDFQW+DKVH
Sbjct: 1184 LSSQEIGELIRFQKMGRTLHRFIHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVH 1243

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            GYVEPFWVIVEDNDGEY+LHHEYF+LKKQYI+EDHTLNFTVPIYEPLPPQYFIRVVSD+W
Sbjct: 1244 GYVEPFWVIVEDNDGEYVLHHEYFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKW 1303

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQT+LPV FRHLILPEKYPPPTELLDLQPLPVTALRNP YE LY  FKHFNP+QTQVF
Sbjct: 1304 LGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVF 1363

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGLEN-MRAVYIAPIEALAKERYREWK 2560
            TVLYNTDDNVLVAAPTGSGKTIC EFA+LRNHQKG ++ MR VYIAP+EA+AKERYR+W+
Sbjct: 1364 TVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPDSIMRVVYIAPLEAIAKERYRDWE 1423

Query: 2559 EKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVD 2380
            +KFG+GLG+ VVELTGET+ DLK LEKG I+ISTPEKWDALSRRWKQRK+VQQVS+FIVD
Sbjct: 1424 KKFGRGLGMRVVELTGETSMDLKLLEKGQIVISTPEKWDALSRRWKQRKYVQQVSVFIVD 1483

Query: 2379 ELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF 2200
            ELHLIGGQ GPVLE+IVSRMR IAS + + IRIVALS SLANAKDLGEWIGATSHGLFNF
Sbjct: 1484 ELHLIGGQGGPVLEVIVSRMRYIASQVENKIRIVALSTSLANAKDLGEWIGATSHGLFNF 1543

Query: 2199 PPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTA 2020
            PPGVRPVPLEIHIQGVDI NFE RMQAM KPTYTA+VQHAKNGKPA+VFVPTRKH RLTA
Sbjct: 1544 PPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAVVQHAKNGKPAIVFVPTRKHVRLTA 1603

Query: 2019 VDLCTYSTSDTDKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDVVL 1840
            VDL +YS  D ++P+F              I ++TL+ TL  GVGYLHEGLNS DQ+VV 
Sbjct: 1604 VDLMSYSKVDNEEPAFRLRSAEELKPFVDKISEETLRTTLEHGVGYLHEGLNSLDQEVVS 1663

Query: 1839 NLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHASR 1660
             LF  G IQVCV SSS+CWG P+ AHLVVVMGTQYYDGRENAHTDYP+TDLLQMMGHASR
Sbjct: 1664 QLFEAGWIQVCVMSSSLCWGVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASR 1723

Query: 1659 PLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAVD 1480
            PL+DNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHD+ NAE+V  V+ENKQDAVD
Sbjct: 1724 PLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNFNAEIVALVIENKQDAVD 1783

Query: 1479 YLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLKPL 1300
            YLTWTFMYRRLT+NPNYYNLQGVSHRHLSDHLS+LVEN L+DLE+SKC+ IE+DM L PL
Sbjct: 1784 YLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLTDLEASKCITIEDDMDLSPL 1843

Query: 1299 NLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLIN 1120
            NLG+IA         IERFSSSLT KTKMKGLL+ILASASEYA+LPIRPGEE+++R+LIN
Sbjct: 1844 NLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEYAQLPIRPGEEDVLRRLIN 1903

Query: 1119 HQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVISSN 940
            HQRFSFENP+CTDPHVKANALLQAHF+R  V GNLA DQREVLL A RLLQAMVDVISSN
Sbjct: 1904 HQRFSFENPRCTDPHVKANALLQAHFTRQHVGGNLALDQREVLLYATRLLQAMVDVISSN 1963

Query: 939  GWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXXXX 760
            GWL LAL  ME+SQMVTQGMWERD MLLQLPHFTK+LAKRCQENPG++IET+F       
Sbjct: 1964 GWLSLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKRCQENPGKNIETIFDLVEMED 2023

Query: 759  XXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQTQ 580
                  LQMSD QL +IA+FCNRFPNID+SY+VL+ +++R GENVTLQVTLER+LEG+T 
Sbjct: 2024 DERRELLQMSDLQLLDIAKFCNRFPNIDLSYDVLEGENVRAGENVTLQVTLERDLEGRT- 2082

Query: 579  SEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKKSY 400
             EVG V APR+PK KEEGWWLVVG+T +NQLLAIKRVSLQR++KVKL F+APTE  KK+Y
Sbjct: 2083 -EVGPVDAPRYPKAKEEGWWLVVGETRSNQLLAIKRVSLQRKAKVKLEFAAPTEAAKKAY 2141

Query: 399  MIYFMCDSYLGCDQEYSFTIDVKEGGEGD 313
             +YFMCDSYLGCDQEY+FT+D KE    D
Sbjct: 2142 TLYFMCDSYLGCDQEYNFTVDAKEAAGPD 2170



 Score =  308 bits (788), Expect = 3e-80
 Identities = 208/709 (29%), Positives = 353/709 (49%), Gaps = 19/709 (2%)
 Frame = -1

Query: 2880 HLILPEKYPPPTE--LLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVFTVLYNTDDNV 2707
            H+  P+  P  ++  L+ +  +P  A      +  +   +  N +Q++V+       DN+
Sbjct: 474  HVPAPKSKPLESDERLVKISEMPEWA------QPAFKGMQQLNRVQSKVYETALFAADNI 527

Query: 2706 LVAAPTGSGKTICGEFALLRNHQKGLE--------NMRAVYIAPIEALAKERYREWKEKF 2551
            L+ APTG+GKT      +L+     ++        N + VY+AP++AL  E       + 
Sbjct: 528  LLCAPTGAGKTNVAVLTILQQLALNMDSDGSINHSNYKIVYVAPMKALVAEVVGNLSHRL 587

Query: 2550 GQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVDELH 2371
             +  G+ V EL+G+     + +++  II++TPEKWD ++R+   R + Q V L I+DE+H
Sbjct: 588  -EAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIH 646

Query: 2370 LIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGAT-SHGLFNFPP 2194
            L+    GPVLE IV+R  R       +IR+V LSA+L N +D+  ++      GLF+F  
Sbjct: 647  LLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSATLPNYEDVALFLRVDLKEGLFHFDN 706

Query: 2193 GVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTAVD 2014
              RPVPL     G+ +     R Q M    Y  ++  A   +  L+FV +RK    TA  
Sbjct: 707  SYRPVPLSQQYIGITVKKPLQRFQLMNDICYEKVMAVAGKHQ-VLIFVHSRKETTKTARA 765

Query: 2013 LCTYSTSDTDKPSFXXXXXXXXXXXXS---AIKDDTLKRTLPLGVGYLHEGLNSYDQDVV 1843
            +   + ++     F            S    +K + LK  LP G    H GL   D+ +V
Sbjct: 766  VRDTALANDTLSRFLKEDAASREILQSHTDMVKSNDLKDLLPYGFAIHHAGLARTDRQIV 825

Query: 1842 LNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHAS 1663
              LF  G +QV VS++++ WG  +PAH V++ GTQ Y   + A T+    D++QM+G A 
Sbjct: 826  EELFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYSPEKGAWTELSPLDVMQMLGRAG 885

Query: 1662 RPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAV 1483
            RP  D+ G+ +I+      +YY   + +  P+ES     L D LNAE+V+G V+N ++A 
Sbjct: 886  RPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREAC 945

Query: 1482 DYLTWTFMYRRLTKNPNYYNLQG-VSHRHLS--DHLSDLVENALSDLESSKCVAIE-EDM 1315
            +++T+T++Y R+ +NP  Y L   V  R L+  +  +DL+ +A + L+ +  V  + +  
Sbjct: 946  NWITYTYLYVRMLRNPTLYGLPADVLSRDLTLDERRADLIHSAATILDKNNLVKYDRKSG 1005

Query: 1314 YLKPLNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELI 1135
            Y +  +LG IA         I  ++  L        L  + + + E+  + +R  E+  +
Sbjct: 1006 YFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELYRLFSLSEEFKYVTVRQDEKMEL 1065

Query: 1134 RKLINHQRFSFENPKCTDPHVKANALLQAHFSRHTVVG-NLAADQREVLLSAHRLLQAMV 958
             KL++      +     +P  K N LLQA+ S+  + G +L +D   +  SA RLL+A+ 
Sbjct: 1066 AKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLLRALF 1124

Query: 957  DVISSNGWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQE 811
            +++   GW  LA   + L +MVT+ MW     L Q      E+  + ++
Sbjct: 1125 EIVLKRGWAQLAEKALNLCKMVTKRMWNVQTPLRQFHGIPNEILMKLEK 1173


>ref|XP_012073544.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
            [Jatropha curcas] gi|643728789|gb|KDP36726.1|
            hypothetical protein JCGZ_08017 [Jatropha curcas]
          Length = 2179

 Score = 2281 bits (5911), Expect = 0.0
 Identities = 1136/1355 (83%), Positives = 1224/1355 (90%), Gaps = 4/1355 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            LVEDLFADGHVQVLVSTATLAWGVNLPAH+VIIKGTQIYNPEKGAWTELSPLDVMQMLGR
Sbjct: 826  LVEDLFADGHVQVLVSTATLAWGVNLPAHSVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 885

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQ+DSYGEGII+TGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE
Sbjct: 886  AGRPQFDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 945

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            AC W+GYTYLY+RMLRNPTLYGL  D+L RD TLEERRADLIHSAA+IL+KNNLVKYDRK
Sbjct: 946  ACNWLGYTYLYVRMLRNPTLYGLAPDVLTRDITLEERRADLIHSAATILEKNNLVKYDRK 1005

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            SGYFQVTDLGRIASYYYITHGTISTYNE+LKPT GDIEL RLFSLSEEFKYV+VRQDEKM
Sbjct: 1006 SGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKM 1065

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIP+KES+EEPSAKINVLLQAYISQLKLEGLSLTSDMVFI QSAGRL+RAL
Sbjct: 1066 ELAKLLDRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAL 1125

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIVLKRGWAQLAEKALNLCKMV+KR+WSVQTPLRQF+GIPNEILMKLEKKDL WER+YD
Sbjct: 1126 FEIVLKRGWAQLAEKALNLCKMVNKRMWSVQTPLRQFNGIPNEILMKLEKKDLAWERFYD 1185

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQEIGELIR+ KMGR LHK IHQ PK+NLAAHVQPITRTVL  ELTITPDFQW+DKVH
Sbjct: 1186 LSSQEIGELIRFPKMGRTLHKFIHQFPKLNLAAHVQPITRTVLRIELTITPDFQWEDKVH 1245

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            GYVEPFWVIVEDNDGEYILHHEYF+LKKQYI+EDHTLNFTVPIYEPL PQYFIRVVSD+W
Sbjct: 1246 GYVEPFWVIVEDNDGEYILHHEYFMLKKQYIDEDHTLNFTVPIYEPLSPQYFIRVVSDKW 1305

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQTVLPV FRHLILPEKYPPPTELLDLQPLPVTALRNP YE LY  FKHFNP+QTQVF
Sbjct: 1306 LGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVF 1365

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGLEN-MRAVYIAPIEALAKERYREWK 2560
            TVLYNTDDN+LVAAPTGSGKTIC EFA+LRN QKG ++ MRAVYIAP+EA+AKERYR+W+
Sbjct: 1366 TVLYNTDDNILVAAPTGSGKTICAEFAILRNLQKGPDSIMRAVYIAPLEAIAKERYRDWE 1425

Query: 2559 EKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVD 2380
             KFGQGLGI VVELTGETA DLK LEKG IIISTPEKWDALSRRWKQRK+VQQVSLFI+D
Sbjct: 1426 RKFGQGLGIRVVELTGETATDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIID 1485

Query: 2379 ELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF 2200
            ELHLIGGQ GPVLE+IVSRMR IAS I + IRIVALS+SLANA+DLGEWIGATSHGLFNF
Sbjct: 1486 ELHLIGGQGGPVLEVIVSRMRYIASQIENKIRIVALSSSLANARDLGEWIGATSHGLFNF 1545

Query: 2199 PPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTA 2020
            PP VRPVPLEIHIQGVDI NFE RMQAM KPTYTAIVQHAKNGKPA+VFVPTRKH +LTA
Sbjct: 1546 PPTVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNGKPAIVFVPTRKHVQLTA 1605

Query: 2019 VDLCTYSTSDT-DKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDVV 1843
            VDL TYS+ D+ +KP+F              I+D  LK TL  GVGYLHEGL S DQ+VV
Sbjct: 1606 VDLMTYSSVDSGEKPAFMLRSSEELEPFVGKIQDGMLKATLLHGVGYLHEGLRSLDQEVV 1665

Query: 1842 LNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHAS 1663
              LF  G IQVCV SSSMCWG P+ AHLV+VMGTQYYDGRENAHTDYP+TDLLQMMGHAS
Sbjct: 1666 SQLFEAGWIQVCVMSSSMCWGVPLSAHLVIVMGTQYYDGRENAHTDYPVTDLLQMMGHAS 1725

Query: 1662 RPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAV 1483
            RPL+DNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHD+ NAEVV GV+ENKQDAV
Sbjct: 1726 RPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNFNAEVVAGVIENKQDAV 1785

Query: 1482 DYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLKP 1303
            DYLTWTFMYRRLT+NPNYYNLQGVSHRHLSDHLS+LVEN L DLE+SKCVAIEEDM L P
Sbjct: 1786 DYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLKDLEASKCVAIEEDMDLSP 1845

Query: 1302 LNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLI 1123
            LNLG+IA         IERFSSSLT KTKMKGLL+ILASASEYA+LP+RPGEEE++R+LI
Sbjct: 1846 LNLGMIASYYYISYTTIERFSSSLTPKTKMKGLLEILASASEYAQLPVRPGEEEVLRRLI 1905

Query: 1122 NHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVISS 943
            NHQRFSFENP+ TDPHVKAN LLQAHFSR  V GNLA DQREVLLSA RLLQA+VDVISS
Sbjct: 1906 NHQRFSFENPRYTDPHVKANVLLQAHFSRQYVGGNLALDQREVLLSAARLLQAIVDVISS 1965

Query: 942  NGWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXXX 763
            NGWL LAL  ME+SQMVTQGMWERD MLLQLPHFTKELAK+CQENPG+SIETVF      
Sbjct: 1966 NGWLSLALLAMEVSQMVTQGMWERDSMLLQLPHFTKELAKKCQENPGKSIETVFDLVEME 2025

Query: 762  XXXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQT 583
                   LQMSDSQL +I +FCNRFPNIDMSYEV+D + +R+GE++TLQVTLER++EG+T
Sbjct: 2026 DDERRELLQMSDSQLLDIVRFCNRFPNIDMSYEVIDGEHVRVGEDITLQVTLERDMEGRT 2085

Query: 582  QSEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKKS 403
              EVG V APR+PK KEEGWWLVVGDT +NQLLAIKRVSLQRRSKVKL F+AP+E G+KS
Sbjct: 2086 --EVGPVDAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRRSKVKLEFAAPSEGGRKS 2143

Query: 402  YMIYFMCDSYLGCDQEYSFTIDVKEGG--EGDGAR 304
            Y ++FMCDSYLGCDQEYSF +DVKE G  + DG R
Sbjct: 2144 YNLFFMCDSYLGCDQEYSFDVDVKEAGGRDDDGGR 2178



 Score =  308 bits (790), Expect = 2e-80
 Identities = 238/855 (27%), Positives = 401/855 (46%), Gaps = 21/855 (2%)
 Frame = -1

Query: 2868 PEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVFTVLYNTDDNVLVAAPT 2689
            P    P   L+ +  +P  A      +  +   +  N +Q++V+       DN+L+ APT
Sbjct: 482  PRPLEPDERLVKISDMPDWA------QPAFKGMQQLNRVQSKVYETALFKADNILLCAPT 535

Query: 2688 GSGKT------ICGEFALLRNHQKGLE--NMRAVYIAPIEALAKERYREWKEKFGQGLGI 2533
            G+GKT      I  + AL RN        N + VY+AP++AL  E       +  Q  G+
Sbjct: 536  GAGKTNVAVLTILQQIALNRNPDGSFNHSNYKIVYVAPMKALVAEVVGNLSNRL-QEYGV 594

Query: 2532 NVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVDELHLIGGQI 2353
             V EL+G+     + +E+  II++TPEKWD ++R+   R + Q V L I+DE+HL+    
Sbjct: 595  KVKELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNR 654

Query: 2352 GPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGA-TSHGLFNFPPGVRPVP 2176
            GPVLE IV+R  R       +IR+V LSA+L N +D+  ++      GLF+F    RPVP
Sbjct: 655  GPVLESIVARTVRQIETTKEHIRLVGLSATLPNFEDVALFLRVDVEKGLFHFDNSYRPVP 714

Query: 2175 LEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTAVDLCTYST 1996
            L     G+ +     R Q M    Y  ++  A   +  L+FV +RK    TA  +   + 
Sbjct: 715  LTQQYIGITVKKPLQRFQLMNDICYEKVMAVAGKHQ-VLIFVHSRKETAKTARAIRDTAL 773

Query: 1995 SDTDKPSFXXXXXXXXXXXXS---AIKDDTLKRTLPLGVGYLHEGLNSYDQDVVLNLFVG 1825
            ++     F            S    +K + LK  LP G    H G+   D+ +V +LF  
Sbjct: 774  ANDTLGRFLREDSASREILQSHTDMVKSNDLKDLLPYGFAVHHAGMTRVDRQLVEDLFAD 833

Query: 1824 GRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHASRPLVDN 1645
            G +QV VS++++ WG  +PAH V++ GTQ Y+  + A T+    D++QM+G A RP  D+
Sbjct: 834  GHVQVLVSTATLAWGVNLPAHSVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDS 893

Query: 1644 SGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAVDYLTWT 1465
             G+ +I+      +YY   + +  P+ES     L D LNAE+V+G V+N ++A ++L +T
Sbjct: 894  YGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWLGYT 953

Query: 1464 FMYRRLTKNPNYYNL-QGVSHRH--LSDHLSDLVENALSDLESSKCVAIE-EDMYLKPLN 1297
            ++Y R+ +NP  Y L   V  R   L +  +DL+ +A + LE +  V  + +  Y +  +
Sbjct: 954  YLYVRMLRNPTLYGLAPDVLTRDITLEERRADLIHSAATILEKNNLVKYDRKSGYFQVTD 1013

Query: 1296 LGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLINH 1117
            LG IA         I  ++  L        L  + + + E+  + +R  E+  + KL++ 
Sbjct: 1014 LGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDR 1073

Query: 1116 QRFSFENPKCTDPHVKANALLQAHFSRHTVVG-NLAADQREVLLSAHRLLQAMVDVISSN 940
                 +     +P  K N LLQA+ S+  + G +L +D   +  SA RL++A+ +++   
Sbjct: 1074 VPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKR 1132

Query: 939  GWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXXXX 760
            GW  LA   + L +MV + MW     L Q      E+  +  E    + E  +       
Sbjct: 1133 GWAQLAEKALNLCKMVNKRMWSVQTPLRQFNGIPNEILMKL-EKKDLAWERFYDLSSQEI 1191

Query: 759  XXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQTQ 580
                   +M  +    + +F ++FP ++++  V      R    + L +T + + E +  
Sbjct: 1192 GELIRFPKMGRT----LHKFIHQFPKLNLAAHV--QPITRTVLRIELTITPDFQWEDKVH 1245

Query: 579  SEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRR---SKVKLVFSAPT-EVG 412
              V             E +W++V D     +L  +   L+++       L F+ P  E  
Sbjct: 1246 GYV-------------EPFWVIVEDNDGEYILHHEYFMLKKQYIDEDHTLNFTVPIYEPL 1292

Query: 411  KKSYMIYFMCDSYLG 367
               Y I  + D +LG
Sbjct: 1293 SPQYFIRVVSDKWLG 1307


>gb|KHG18677.1| U5 small nuclear ribonucleoprotein helicase [Gossypium arboreum]
          Length = 2177

 Score = 2270 bits (5883), Expect = 0.0
 Identities = 1121/1356 (82%), Positives = 1221/1356 (90%), Gaps = 3/1356 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            +VE+LF DGHVQVLVSTATLAWGVNLPAHTVIIKGTQIY+PEKGAWTELSPLDVMQMLGR
Sbjct: 824  IVEELFGDGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYSPEKGAWTELSPLDVMQMLGR 883

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQYDSYGEGII+TGHSELQYYLSLMNQQLPIESQF+SKLADQLNAEIVLGTVQNARE
Sbjct: 884  AGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNARE 943

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            AC WIGYTYLYIRMLRNPTLYGLPAD+L RD TLEERRADLIHSAA+ILDKNNLVKYDRK
Sbjct: 944  ACNWIGYTYLYIRMLRNPTLYGLPADVLSRDLTLEERRADLIHSAATILDKNNLVKYDRK 1003

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            SGYFQVTDLGRIASYYYITHGTISTYNE+LKPT GDIEL RLFSLSEEF+YV+VRQDEKM
Sbjct: 1004 SGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFRYVTVRQDEKM 1063

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIP+KES+EEPSAKINVLLQAYISQLKLEGLSLTSDMV+I QSAGRLLRAL
Sbjct: 1064 ELAKLLDRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLLRAL 1123

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIVLKRGWAQLAEKALNLCKMV KR+W+VQTPLRQF+GIPNEILMKLEKKDL W+RYYD
Sbjct: 1124 FEIVLKRGWAQLAEKALNLCKMVTKRMWNVQTPLRQFNGIPNEILMKLEKKDLAWDRYYD 1183

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQEIGELIRY KMGR LH+ IHQ PK+NLAAHVQPITRT+L  ELTITPDFQW+DKVH
Sbjct: 1184 LSSQEIGELIRYPKMGRTLHRFIHQFPKLNLAAHVQPITRTILRVELTITPDFQWEDKVH 1243

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            GYVEPFWVI+EDNDGEYILHHEYF+LKKQYI+EDHTLNFTVPIYEPLPPQYFIRVVSD+W
Sbjct: 1244 GYVEPFWVIIEDNDGEYILHHEYFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKW 1303

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQTVLP+ FRHLILPEKYPPPTELLDLQPLPVTALRNP YE LY  FKHFNP+QTQVF
Sbjct: 1304 LGSQTVLPISFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVF 1363

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGLEN-MRAVYIAPIEALAKERYREWK 2560
            TVLYNTDDNVLVAAPTGSGKTIC EFA+LRNHQKG ++ MR VYIAP+EA+AKERYR+W+
Sbjct: 1364 TVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPDSTMRVVYIAPLEAIAKERYRDWE 1423

Query: 2559 EKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVD 2380
             KFG+GLG+ VVELTGE A DLK LEKG +IISTPEKWDALSRRWKQRK VQQVSLFIVD
Sbjct: 1424 RKFGKGLGMRVVELTGELAMDLKLLEKGQVIISTPEKWDALSRRWKQRKFVQQVSLFIVD 1483

Query: 2379 ELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF 2200
            ELHLIGGQ GPVLE+IVSRMR IAS +   IRIVALS SLANAKDLGEWIGA+SHGLFNF
Sbjct: 1484 ELHLIGGQGGPVLEVIVSRMRYIASQVEKKIRIVALSTSLANAKDLGEWIGASSHGLFNF 1543

Query: 2199 PPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTA 2020
            PPGVRPVPLEIHIQGVDI NFE RMQAM KPT+TAIVQHAK GKPA+V+VPTRKH RLTA
Sbjct: 1544 PPGVRPVPLEIHIQGVDIANFEARMQAMTKPTFTAIVQHAKGGKPAIVYVPTRKHVRLTA 1603

Query: 2019 VDLCTYSTSDT-DKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDVV 1843
            VDL +YS  D  D+P+F              I ++TL+ TL  GVGYLHEGL+S DQ+VV
Sbjct: 1604 VDLMSYSKVDNEDEPAFRLRSAEELKPFVDKISEETLRTTLEYGVGYLHEGLSSLDQEVV 1663

Query: 1842 LNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHAS 1663
              LF  G IQVCV SS++CWG P+ AHLVVVMGTQYYDGRENAHTDYP+TDLLQMMGHAS
Sbjct: 1664 SQLFEAGWIQVCVMSSALCWGVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHAS 1723

Query: 1662 RPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAV 1483
            RPL+DNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHD+ NAE+V  V+ENKQDAV
Sbjct: 1724 RPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNFNAEIVATVIENKQDAV 1783

Query: 1482 DYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLKP 1303
            DYLTWTFMYRRLT+NPNYYNLQGVSHRHLSDHLS+LVEN L+DLE+SKC+ IE+DM L P
Sbjct: 1784 DYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLNDLEASKCITIEDDMDLSP 1843

Query: 1302 LNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLI 1123
            LNLG+IA         IERFSSSLT KTKMKGLL+ILASASEYA LPIRPGEEE++R+LI
Sbjct: 1844 LNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEYANLPIRPGEEEVLRRLI 1903

Query: 1122 NHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVISS 943
            NHQRFSF+NP+CTDPHVKANALLQAHFSR  V GNL+ DQREVLL A RLLQAMVDVISS
Sbjct: 1904 NHQRFSFDNPRCTDPHVKANALLQAHFSRQHVGGNLSLDQREVLLFATRLLQAMVDVISS 1963

Query: 942  NGWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXXX 763
            NGWL LAL  ME+SQMVTQGMWERD MLLQLP+FTKELAKRCQENPG++IET+F      
Sbjct: 1964 NGWLSLALLAMEVSQMVTQGMWERDSMLLQLPYFTKELAKRCQENPGKNIETIFDLVEME 2023

Query: 762  XXXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQT 583
                   LQMSD QL +IA+FCNRFPNID+SYEV+DSD++R GE VTLQVTLER+LEG+T
Sbjct: 2024 DDERRELLQMSDLQLLDIAKFCNRFPNIDLSYEVIDSDNVRAGEYVTLQVTLERDLEGKT 2083

Query: 582  QSEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKKS 403
              EVG V APR+PK K+EGWWLVVGDT +NQLLAIKRVSLQR++KVKL F+APTE  +K+
Sbjct: 2084 --EVGPVDAPRYPKAKDEGWWLVVGDTNSNQLLAIKRVSLQRKAKVKLEFAAPTEATEKA 2141

Query: 402  YMIYFMCDSYLGCDQEYSFTIDVKE-GGEGDGARSD 298
            Y +YFMCDSYLGCDQEYSFT+DVKE  G G+ + S+
Sbjct: 2142 YTLYFMCDSYLGCDQEYSFTVDVKEAAGPGEDSGSE 2177



 Score =  304 bits (778), Expect = 5e-79
 Identities = 201/674 (29%), Positives = 339/674 (50%), Gaps = 17/674 (2%)
 Frame = -1

Query: 2781 YGSFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGLE-------- 2626
            +   +  N +Q++V+     + DN+L+ APTG+GKT      +L+     ++        
Sbjct: 503  FKGMQQLNRVQSKVYETALFSADNILLCAPTGAGKTNVAVLTILQQLALNMDADGSINHG 562

Query: 2625 NMRAVYIAPIEALAKERYREWKEKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKW 2446
            N + VY+AP++AL  E       +  +  G+ V EL+G+     + +++  II++TPEKW
Sbjct: 563  NYKIVYVAPMKALVAEVVGNLSHRL-EAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKW 621

Query: 2445 DALSRRWKQRKHVQQVSLFIVDELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSA 2266
            D ++R+   R + Q V L I+DE+HL+    GPVLE IV+R  R       +IR+V LSA
Sbjct: 622  DIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSA 681

Query: 2265 SLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIV 2089
            +L N +D+  ++      GLF+F    RPVPL     G+ +     R Q M    Y  ++
Sbjct: 682  TLPNFEDVALFLRVNFEKGLFHFDNSYRPVPLSQQYIGITVKKPLQRFQLMNDICYEKVM 741

Query: 2088 QHAKNGKPALVFVPTRKHARLTAVDLCTYSTSDTDKPSFXXXXXXXXXXXXS---AIKDD 1918
              A   +  L+FV +RK    TA  +   + ++     F            S    +K +
Sbjct: 742  AVAGKHQ-VLIFVHSRKETAKTARAVRDTALANDTLSRFLKEDAASREILQSHTDMVKSN 800

Query: 1917 TLKRTLPLGVGYLHEGLNSYDQDVVLNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQ 1738
             LK  LP G    H GL   D+ +V  LF  G +QV VS++++ WG  +PAH V++ GTQ
Sbjct: 801  DLKDLLPYGFAIHHAGLARTDRQIVEELFGDGHVQVLVSTATLAWGVNLPAHTVIIKGTQ 860

Query: 1737 YYDGRENAHTDYPITDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESH 1558
             Y   + A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+ES 
Sbjct: 861  IYSPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQ 920

Query: 1557 LHHFLHDHLNAEVVVGVVENKQDAVDYLTWTFMYRRLTKNPNYYNLQG-VSHRHLS--DH 1387
                L D LNAE+V+G V+N ++A +++ +T++Y R+ +NP  Y L   V  R L+  + 
Sbjct: 921  FISKLADQLNAEIVLGTVQNAREACNWIGYTYLYIRMLRNPTLYGLPADVLSRDLTLEER 980

Query: 1386 LSDLVENALSDLESSKCVAIE-EDMYLKPLNLGLIAXXXXXXXXXIERFSSSLTQKTKMK 1210
             +DL+ +A + L+ +  V  + +  Y +  +LG IA         I  ++  L       
Sbjct: 981  RADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDI 1040

Query: 1209 GLLDILASASEYAELPIRPGEEELIRKLINHQRFSFENPKCTDPHVKANALLQAHFSRHT 1030
             L  + + + E+  + +R  E+  + KL++      +     +P  K N LLQA+ S+  
Sbjct: 1041 ELCRLFSLSEEFRYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLK 1099

Query: 1029 VVG-NLAADQREVLLSAHRLLQAMVDVISSNGWLGLALSTMELSQMVTQGMWERDPMLLQ 853
            + G +L +D   +  SA RLL+A+ +++   GW  LA   + L +MVT+ MW     L Q
Sbjct: 1100 LEGLSLTSDMVYITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVTKRMWNVQTPLRQ 1159

Query: 852  LPHFTKELAKRCQE 811
                  E+  + ++
Sbjct: 1160 FNGIPNEILMKLEK 1173


>ref|XP_008653400.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Zea mays]
          Length = 2184

 Score = 2269 bits (5881), Expect = 0.0
 Identities = 1115/1348 (82%), Positives = 1217/1348 (90%), Gaps = 3/1348 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            LVE+LFAD H+QVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR
Sbjct: 838  LVEELFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 897

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQYD++GEGIILTGHSELQ+YLSLMNQQLPIESQF+SKLADQLNAEIVLGT+QNARE
Sbjct: 898  AGRPQYDTHGEGIILTGHSELQFYLSLMNQQLPIESQFISKLADQLNAEIVLGTIQNARE 957

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            AC+W+GYTYLYIRMLRNPTLYGLPADIL+ DKTL+ERRADLIHSAA++LD+NNL+KYDRK
Sbjct: 958  ACSWLGYTYLYIRMLRNPTLYGLPADILESDKTLDERRADLIHSAANLLDRNNLIKYDRK 1017

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            +GYFQVTDLGRIASYYYI+HGTISTYNEYLKPT GDIEL RLFSLSEEFKYV VR DEKM
Sbjct: 1018 TGYFQVTDLGRIASYYYISHGTISTYNEYLKPTMGDIELCRLFSLSEEFKYVGVRLDEKM 1077

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIPVKES+EEPSAKINVLLQAYIS+LKLEGLSL+SDMV+IRQSAGRLLRAL
Sbjct: 1078 ELAKLLDRVPIPVKESLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYIRQSAGRLLRAL 1137

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIVLKRGWAQLAEKALNLCKMVDK++WSVQTPLRQF GIP EILMKLEKK+L WERYYD
Sbjct: 1138 FEIVLKRGWAQLAEKALNLCKMVDKQMWSVQTPLRQFTGIPKEILMKLEKKELAWERYYD 1197

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQEIGELIRY KMGR LHKCIHQLPK+NL+AHVQPITRTVLGFELTITPDFQWDDKVH
Sbjct: 1198 LSSQEIGELIRYPKMGRPLHKCIHQLPKLNLSAHVQPITRTVLGFELTITPDFQWDDKVH 1257

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            GYVEPFWVIVEDNDGEYILHHEYF+LKKQY++EDHTLNFTVPIYEPLPPQYFIRVVSD+W
Sbjct: 1258 GYVEPFWVIVEDNDGEYILHHEYFMLKKQYVDEDHTLNFTVPIYEPLPPQYFIRVVSDKW 1317

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQT+LPVCFRHLILPEKY PPTELLDLQPLPV+ALRN +YE LY +FKHFNPIQTQVF
Sbjct: 1318 LGSQTILPVCFRHLILPEKYAPPTELLDLQPLPVSALRNARYEGLYSAFKHFNPIQTQVF 1377

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGL---ENMRAVYIAPIEALAKERYRE 2566
            TVLYN+DD+VLVAAPTGSGKTIC EFA+LRNHQK L    NMR VYIAPIEALAKERYR+
Sbjct: 1378 TVLYNSDDSVLVAAPTGSGKTICAEFAILRNHQKALSGESNMRVVYIAPIEALAKERYRD 1437

Query: 2565 WKEKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFI 2386
            W+ KFG+     VVELTGETAADLK L+KG IIISTPEKWDALSRRWKQRKH+QQVSLFI
Sbjct: 1438 WERKFGE--FAKVVELTGETAADLKLLDKGEIIISTPEKWDALSRRWKQRKHIQQVSLFI 1495

Query: 2385 VDELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLF 2206
            VDELHL+G   G VLE+IVSRMRRI+SHIGSNIRIVALSASLANAKDLGEWIGATSHGLF
Sbjct: 1496 VDELHLLGSDKGHVLEVIVSRMRRISSHIGSNIRIVALSASLANAKDLGEWIGATSHGLF 1555

Query: 2205 NFPPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARL 2026
            NFPP VRPVPLEIHIQGVDI NFE RMQAM KPTYTAI QHAKN KPALV+VPTRKHARL
Sbjct: 1556 NFPPAVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAITQHAKNNKPALVYVPTRKHARL 1615

Query: 2025 TAVDLCTYSTSDTDKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDV 1846
            TA+DLC YS+ +     F              ++++TLK TL  GVGYLHEGL+  DQ++
Sbjct: 1616 TALDLCAYSSVEGAGTPFLLGSGDEMDTFTRGVEEETLKNTLKCGVGYLHEGLSELDQEL 1675

Query: 1845 VLNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHA 1666
            V  LF+GGRIQVCV+SS+MCWG+P+PAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHA
Sbjct: 1676 VTQLFLGGRIQVCVASSTMCWGRPLPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHA 1735

Query: 1665 SRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDA 1486
            SRPL DNSGKCVILCHAPRKEYYKKFL+EAFPVES+LHHFLHDH+NAEVVVGVVENKQDA
Sbjct: 1736 SRPLQDNSGKCVILCHAPRKEYYKKFLFEAFPVESNLHHFLHDHMNAEVVVGVVENKQDA 1795

Query: 1485 VDYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLK 1306
            VDYLTWTFMYRRL KNPN+YNLQGVSHRHLSDHLS+LVE  L+DLESSKCVAIEEDMYLK
Sbjct: 1796 VDYLTWTFMYRRLAKNPNFYNLQGVSHRHLSDHLSELVETILNDLESSKCVAIEEDMYLK 1855

Query: 1305 PLNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKL 1126
            PLNLGLIA         IERFSS LTQKTK+KGLL+ILASASEYAELP RPGEEE I +L
Sbjct: 1856 PLNLGLIASYYYISYTTIERFSSMLTQKTKVKGLLEILASASEYAELPGRPGEEEFIERL 1915

Query: 1125 INHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVIS 946
            + HQRFS E PK  DPHVKANALLQAHFSRHTVVGNLAADQRE+LLSAHRLLQAMVDVIS
Sbjct: 1916 VRHQRFSIEKPKYGDPHVKANALLQAHFSRHTVVGNLAADQREILLSAHRLLQAMVDVIS 1975

Query: 945  SNGWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXX 766
            SNGWL LALSTMELSQMVTQGMW+RD +LLQ+PHFTK+LA+RCQEN G+ IE++F     
Sbjct: 1976 SNGWLSLALSTMELSQMVTQGMWDRDSVLLQVPHFTKDLARRCQENEGKPIESIFDLAEM 2035

Query: 765  XXXXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQ 586
                    LQ+S+SQL +I +F  RFPN+DM+YEV + DDI  G+NVT+QVTLER++   
Sbjct: 2036 AVDEMRDLLQLSNSQLQDIIEFIKRFPNVDMTYEVREGDDISAGDNVTVQVTLERDMT-N 2094

Query: 585  TQSEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKK 406
              SEVG V+APRFPK KEEGWWLV+GD+ TNQLLAIKRV+LQ+R++VKL FSAP E G+K
Sbjct: 2095 VSSEVGPVHAPRFPKPKEEGWWLVIGDSSTNQLLAIKRVALQKRARVKLEFSAPAEAGRK 2154

Query: 405  SYMIYFMCDSYLGCDQEYSFTIDVKEGG 322
             YMIY M DSYLGCDQEY FT+DVK+ G
Sbjct: 2155 DYMIYLMSDSYLGCDQEYEFTVDVKDAG 2182



 Score =  304 bits (778), Expect = 5e-79
 Identities = 202/672 (30%), Positives = 335/672 (49%), Gaps = 15/672 (2%)
 Frame = -1

Query: 2781 YGSFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICGEFALLRN---HQKGLE----N 2623
            +      N +Q++V+       DN+L+ APTG+GKT      +L+    H +  E     
Sbjct: 519  FDGMTQLNRVQSRVYDTALFKPDNILLCAPTGAGKTNVAVLTILQQIGLHMQDGEFDNTK 578

Query: 2622 MRAVYIAPIEALAKERYREWKEKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWD 2443
             + VY+AP++AL  E      ++   G  + V EL+G+     + +++  II++TPEKWD
Sbjct: 579  YKIVYVAPMKALVAEVVGNLSKRLA-GYNVTVRELSGDQNLTKQQIDETQIIVTTPEKWD 637

Query: 2442 ALSRRWKQRKHVQQVSLFIVDELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSAS 2263
             ++R+   R + Q V L I+DE+HL+    GPVLE IV+R  R       NIR+V LSA+
Sbjct: 638  IVTRKSGDRTYTQMVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKENIRLVGLSAT 697

Query: 2262 LANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQH 2083
            L N +D+  ++      LF F    RP PL     G+ +     RMQ M +  Y  ++  
Sbjct: 698  LPNYEDVALFLRVRKESLFYFDNSYRPCPLAQQYIGITVRKPLQRMQLMNEICYEKVMAA 757

Query: 2082 AKNGKPALVFVPTRKHARLTAVDLC-TYSTSDTDKPSFXXXXXXXXXXXXSA--IKDDTL 1912
            A   +  L+FV +RK    TA  +  T   +DT                  A  +K++ L
Sbjct: 758  AGKHQ-VLIFVHSRKETAKTAKAIRDTALANDTVSRFLKNESASQEILGTHAELVKNNDL 816

Query: 1911 KRTLPLGVGYLHEGLNSYDQDVVLNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYY 1732
            K  LP G    H G+   D+++V  LF    IQV VS++++ WG  +PAH V++ GTQ Y
Sbjct: 817  KDLLPYGFAIHHAGMARVDRELVEELFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQIY 876

Query: 1731 DGRENAHTDYPITDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLH 1552
            +  + A T+    D++QM+G A RP  D  G+ +IL      ++Y   + +  P+ES   
Sbjct: 877  NPEKGAWTELSPLDVMQMLGRAGRPQYDTHGEGIILTGHSELQFYLSLMNQQLPIESQFI 936

Query: 1551 HFLHDHLNAEVVVGVVENKQDAVDYLTWTFMYRRLTKNPNYYNLQG---VSHRHLSDHLS 1381
              L D LNAE+V+G ++N ++A  +L +T++Y R+ +NP  Y L      S + L +  +
Sbjct: 937  SKLADQLNAEIVLGTIQNAREACSWLGYTYLYIRMLRNPTLYGLPADILESDKTLDERRA 996

Query: 1380 DLVENALSDLESSKCVAIEEDM-YLKPLNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGL 1204
            DL+ +A + L+ +  +  +    Y +  +LG IA         I  ++  L        L
Sbjct: 997  DLIHSAANLLDRNNLIKYDRKTGYFQVTDLGRIASYYYISHGTISTYNEYLKPTMGDIEL 1056

Query: 1203 LDILASASEYAELPIRPGEEELIRKLINHQRFSFENPKCTDPHVKANALLQAHFSRHTVV 1024
              + + + E+  + +R  E+  + KL++      +     +P  K N LLQA+ SR  + 
Sbjct: 1057 CRLFSLSEEFKYVGVRLDEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQAYISRLKLE 1115

Query: 1023 G-NLAADQREVLLSAHRLLQAMVDVISSNGWLGLALSTMELSQMVTQGMWERDPMLLQLP 847
            G +L++D   +  SA RLL+A+ +++   GW  LA   + L +MV + MW     L Q  
Sbjct: 1116 GLSLSSDMVYIRQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVDKQMWSVQTPLRQFT 1175

Query: 846  HFTKELAKRCQE 811
               KE+  + ++
Sbjct: 1176 GIPKEILMKLEK 1187


>gb|EEE56150.1| hypothetical protein OsJ_05035 [Oryza sativa Japonica Group]
          Length = 2238

 Score = 2269 bits (5881), Expect = 0.0
 Identities = 1115/1348 (82%), Positives = 1218/1348 (90%), Gaps = 3/1348 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            LVE+LFAD H+QVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR
Sbjct: 892  LVEELFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 951

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQYD++GEGIILTGHSELQYYLSLMNQQLPIESQF+S+LADQLNAEIVLGT+QNARE
Sbjct: 952  AGRPQYDTHGEGIILTGHSELQYYLSLMNQQLPIESQFISRLADQLNAEIVLGTIQNARE 1011

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            AC+W+GYTYLYIRMLRNPTLYGLPADI++ DKTL+ERRADL+HSAA++LD+NNL+KYDRK
Sbjct: 1012 ACSWLGYTYLYIRMLRNPTLYGLPADIMETDKTLDERRADLVHSAANLLDRNNLIKYDRK 1071

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            +GYFQVTDLGRIASYYYI+HGTISTYNEYLKPT GDIEL RLFSLSEEFKYVSVRQDEKM
Sbjct: 1072 TGYFQVTDLGRIASYYYISHGTISTYNEYLKPTMGDIELCRLFSLSEEFKYVSVRQDEKM 1131

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIPVKES+EEPSAKINVLLQAYIS+LKLEGLSL+SDMV+IRQSAGRLLRAL
Sbjct: 1132 ELAKLLDRVPIPVKESLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYIRQSAGRLLRAL 1191

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIVLKRGWAQLAEKALNLCKM+DK++W+VQTPLRQF GIP EILMKLEKK+L WERYYD
Sbjct: 1192 FEIVLKRGWAQLAEKALNLCKMIDKQMWNVQTPLRQFPGIPKEILMKLEKKELAWERYYD 1251

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQEIGELIR+ KMGRQLHKCIHQLPK+NL+AHVQPITRTVLGFELTITPDFQWDDKVH
Sbjct: 1252 LSSQEIGELIRFPKMGRQLHKCIHQLPKLNLSAHVQPITRTVLGFELTITPDFQWDDKVH 1311

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            GYVEPFWVIVEDNDGE ILHHEYF++KKQY++EDHTLNFTVPIYEPLPPQYFIRVVSD+W
Sbjct: 1312 GYVEPFWVIVEDNDGENILHHEYFMVKKQYVDEDHTLNFTVPIYEPLPPQYFIRVVSDKW 1371

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQT+LPVCFRHLILPEKY PPTELLDLQPLPVTALRN +YE LY +FKHFNPIQTQVF
Sbjct: 1372 LGSQTILPVCFRHLILPEKYAPPTELLDLQPLPVTALRNARYEGLYSAFKHFNPIQTQVF 1431

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQK---GLENMRAVYIAPIEALAKERYRE 2566
            TVLYNTDD+VLVAAPTGSGKTIC EFA+LRNHQK   G  NMR VYIAPIEALAKERYR+
Sbjct: 1432 TVLYNTDDSVLVAAPTGSGKTICAEFAILRNHQKAVSGESNMRVVYIAPIEALAKERYRD 1491

Query: 2565 WKEKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFI 2386
            W++KFG+     VVELTGETAADLK L+KG IIISTPEKWDALSRRWKQRK VQQVSLFI
Sbjct: 1492 WEQKFGE--FARVVELTGETAADLKLLDKGEIIISTPEKWDALSRRWKQRKQVQQVSLFI 1549

Query: 2385 VDELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLF 2206
            VDELHLIG + G VLE+IVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLF
Sbjct: 1550 VDELHLIGSEKGHVLEVIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLF 1609

Query: 2205 NFPPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARL 2026
            NFPP VRPVPLEIHIQGVDI NFE RMQAM KPTYTAI QHAKNGKPALVFVPTRKHARL
Sbjct: 1610 NFPPAVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAITQHAKNGKPALVFVPTRKHARL 1669

Query: 2025 TAVDLCTYSTSDTDKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDV 1846
            TA+DLC YS+++     F              I D+TLK TL  GVGYLHEGL+  +Q+V
Sbjct: 1670 TALDLCAYSSAEGGGTPFLLGSEDEMDAFTGGISDETLKYTLKCGVGYLHEGLSDLEQEV 1729

Query: 1845 VLNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHA 1666
            V  LF+GGRIQVCV+SS++CWG+ +PAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHA
Sbjct: 1730 VTQLFLGGRIQVCVASSTVCWGRSLPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHA 1789

Query: 1665 SRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDA 1486
            SRPL DNSGKCVILCHAPRKEYYKKFL+EAFPVESHLHHFLHDH+NAEVVVGV+ENKQDA
Sbjct: 1790 SRPLQDNSGKCVILCHAPRKEYYKKFLFEAFPVESHLHHFLHDHMNAEVVVGVIENKQDA 1849

Query: 1485 VDYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLK 1306
            VDYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLS+LVE  L+DLESSKCVAIEEDMYLK
Sbjct: 1850 VDYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSELVETVLNDLESSKCVAIEEDMYLK 1909

Query: 1305 PLNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKL 1126
            PLNLGLIA         IERFSS LTQKTKMKGLL+ILASASEYAELP RPGEE+ I KL
Sbjct: 1910 PLNLGLIASYYYISYTTIERFSSMLTQKTKMKGLLEILASASEYAELPSRPGEEDFIEKL 1969

Query: 1125 INHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVIS 946
            + HQRFS E PK  DPHVKANALLQAHFSRHT++GNLAADQRE+LLSAHRLLQAMVDVIS
Sbjct: 1970 VRHQRFSIEKPKYGDPHVKANALLQAHFSRHTILGNLAADQREILLSAHRLLQAMVDVIS 2029

Query: 945  SNGWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXX 766
            SNGWL LAL+ MELSQMVTQGMW+RD +LLQLPHFTKELA+RCQEN GR IE++F     
Sbjct: 2030 SNGWLTLALNAMELSQMVTQGMWDRDSVLLQLPHFTKELARRCQENEGRPIESIFDLAEM 2089

Query: 765  XXXXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQ 586
                    LQ S+ QL +I +F  RFPN+DM+YEV + DDIR G+NVT+QVTLER++   
Sbjct: 2090 SIDEMRDLLQQSNPQLQDIIEFFKRFPNVDMAYEVREGDDIRAGDNVTVQVTLERDMT-N 2148

Query: 585  TQSEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKK 406
              SEVG V+APR+PK KEEGWWLV+GD+ TNQLLAIKRV+LQ+R++VKL F+A +E G+K
Sbjct: 2149 LPSEVGPVHAPRYPKPKEEGWWLVIGDSSTNQLLAIKRVALQKRARVKLEFTAASEAGRK 2208

Query: 405  SYMIYFMCDSYLGCDQEYSFTIDVKEGG 322
             YMIY M DSYLGCDQEY FT+DV + G
Sbjct: 2209 EYMIYLMSDSYLGCDQEYEFTVDVMDAG 2236



 Score =  310 bits (795), Expect = 5e-81
 Identities = 207/672 (30%), Positives = 336/672 (50%), Gaps = 15/672 (2%)
 Frame = -1

Query: 2781 YGSFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICGEFALLRN---HQKG--LENMR 2617
            +      N +Q++V+       DN+L+ APTG+GKT      +L+    H K    +N +
Sbjct: 573  FAKMTQLNRVQSKVYETALFKPDNILLCAPTGAGKTNVAVLTILQQIGLHMKDGVFDNTK 632

Query: 2616 --AVYIAPIEALAKERYREWKEKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWD 2443
               VY+AP++AL  E       +     GI V EL+G+     + +++  II++TPEKWD
Sbjct: 633  YKIVYVAPMKALVAEVVGNLSARLS-AYGITVRELSGDQNLTKQQIDETQIIVTTPEKWD 691

Query: 2442 ALSRRWKQRKHVQQVSLFIVDELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSAS 2263
             ++R+   R + Q V L I+DE+HL+    GPVLE IVSR  R       +IR+V LSA+
Sbjct: 692  IVTRKSGDRTYTQMVKLLIIDEIHLLHDNRGPVLESIVSRTVRQIETTKEHIRLVGLSAT 751

Query: 2262 LANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQH 2083
            L N +D+  ++   S GLF+F    RP PL     G+ +     R Q M +  Y  ++  
Sbjct: 752  LPNYEDVAVFLRVRSDGLFHFDNSYRPCPLAQQYIGITVRKPLQRFQLMNEICYEKVMAS 811

Query: 2082 AKNGKPALVFVPTRKHARLTAVDLC-TYSTSDTDKPSFXXXXXXXXXXXXSA--IKDDTL 1912
            A   +  L+FV +RK    TA  +  T   +DT                  A  +K   L
Sbjct: 812  AGKHQ-VLIFVHSRKETAKTARAIRDTALANDTLNRFLKDDSASQEILGSQAELVKSSDL 870

Query: 1911 KRTLPLGVGYLHEGLNSYDQDVVLNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYY 1732
            K  LP G    H GL   D+++V  LF    IQV VS++++ WG  +PAH V++ GTQ Y
Sbjct: 871  KDLLPYGFAIHHAGLARVDRELVEELFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQIY 930

Query: 1731 DGRENAHTDYPITDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLH 1552
            +  + A T+    D++QM+G A RP  D  G+ +IL      +YY   + +  P+ES   
Sbjct: 931  NPEKGAWTELSPLDVMQMLGRAGRPQYDTHGEGIILTGHSELQYYLSLMNQQLPIESQFI 990

Query: 1551 HFLHDHLNAEVVVGVVENKQDAVDYLTWTFMYRRLTKNPNYYNLQG---VSHRHLSDHLS 1381
              L D LNAE+V+G ++N ++A  +L +T++Y R+ +NP  Y L      + + L +  +
Sbjct: 991  SRLADQLNAEIVLGTIQNAREACSWLGYTYLYIRMLRNPTLYGLPADIMETDKTLDERRA 1050

Query: 1380 DLVENALSDLESSKCVAIEEDM-YLKPLNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGL 1204
            DLV +A + L+ +  +  +    Y +  +LG IA         I  ++  L        L
Sbjct: 1051 DLVHSAANLLDRNNLIKYDRKTGYFQVTDLGRIASYYYISHGTISTYNEYLKPTMGDIEL 1110

Query: 1203 LDILASASEYAELPIRPGEEELIRKLINHQRFSFENPKCTDPHVKANALLQAHFSRHTVV 1024
              + + + E+  + +R  E+  + KL++      +     +P  K N LLQA+ SR  + 
Sbjct: 1111 CRLFSLSEEFKYVSVRQDEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQAYISRLKLE 1169

Query: 1023 G-NLAADQREVLLSAHRLLQAMVDVISSNGWLGLALSTMELSQMVTQGMWERDPMLLQLP 847
            G +L++D   +  SA RLL+A+ +++   GW  LA   + L +M+ + MW     L Q P
Sbjct: 1170 GLSLSSDMVYIRQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMIDKQMWNVQTPLRQFP 1229

Query: 846  HFTKELAKRCQE 811
               KE+  + ++
Sbjct: 1230 GIPKEILMKLEK 1241


>ref|XP_002463258.1| hypothetical protein SORBIDRAFT_02g040700 [Sorghum bicolor]
            gi|241926635|gb|EER99779.1| hypothetical protein
            SORBIDRAFT_02g040700 [Sorghum bicolor]
          Length = 2182

 Score = 2269 bits (5879), Expect = 0.0
 Identities = 1114/1348 (82%), Positives = 1217/1348 (90%), Gaps = 3/1348 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            LVE+LFAD H+QVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR
Sbjct: 836  LVEELFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 895

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQYD++GEGIILTGHSELQ+YLSLMNQQLPIESQF+SKLADQLNAEIVLGT+QNARE
Sbjct: 896  AGRPQYDTHGEGIILTGHSELQFYLSLMNQQLPIESQFISKLADQLNAEIVLGTIQNARE 955

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            AC+W+GYTYLYIRMLRNPTLYGLPADIL+ DKTL+ERRADLIHSAA++LD+NNL+KYDRK
Sbjct: 956  ACSWLGYTYLYIRMLRNPTLYGLPADILESDKTLDERRADLIHSAANLLDRNNLIKYDRK 1015

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            +GYFQVTDLGRIASYYYI+HGTISTYNEYLKPT GDIEL RLFSLSEEFKYV VR DEKM
Sbjct: 1016 TGYFQVTDLGRIASYYYISHGTISTYNEYLKPTMGDIELCRLFSLSEEFKYVGVRLDEKM 1075

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIPVKES+EEPSAKINVLLQAYIS+LKLEGLSL+SDMV+IRQSAGRLLRAL
Sbjct: 1076 ELAKLLDRVPIPVKESLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYIRQSAGRLLRAL 1135

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIVLKRGWAQLAEKALNLCKMVDK++WSVQTPLRQF GIP EILMKLEKK+L WERYYD
Sbjct: 1136 FEIVLKRGWAQLAEKALNLCKMVDKQMWSVQTPLRQFTGIPKEILMKLEKKELAWERYYD 1195

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQEIGELIRY KMGRQLHKCIHQLPK+NL+AHVQPITRTVLGFELTITPDFQWDDKVH
Sbjct: 1196 LSSQEIGELIRYPKMGRQLHKCIHQLPKLNLSAHVQPITRTVLGFELTITPDFQWDDKVH 1255

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            GYVEPFWVIVEDNDGEYILHHEYF+LKKQY++EDHTLNFTVPIYEPLPPQYFIRVVSD+W
Sbjct: 1256 GYVEPFWVIVEDNDGEYILHHEYFMLKKQYVDEDHTLNFTVPIYEPLPPQYFIRVVSDKW 1315

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQT+LPVCFRHLILPEKY PPTELLDLQPLPV+ALRN +YE LY +FKHFNPIQTQVF
Sbjct: 1316 LGSQTILPVCFRHLILPEKYAPPTELLDLQPLPVSALRNARYEGLYSAFKHFNPIQTQVF 1375

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQK---GLENMRAVYIAPIEALAKERYRE 2566
            TVLYN+DD+VLVAAPTGSGKTIC EFA+LRNHQ+   G  NMR VYIAPIE LAKERYR+
Sbjct: 1376 TVLYNSDDSVLVAAPTGSGKTICAEFAILRNHQRAVSGESNMRVVYIAPIEGLAKERYRD 1435

Query: 2565 WKEKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFI 2386
            W+ KFG+     VVELTGETAADLK L+KG IIISTPEKWDALSRRWKQRKH+QQVSLFI
Sbjct: 1436 WERKFGE--FAKVVELTGETAADLKLLDKGEIIISTPEKWDALSRRWKQRKHIQQVSLFI 1493

Query: 2385 VDELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLF 2206
            VDELHL+G   G VLE+IVSRMRRI+SHIGSNIRIVALSASLANAKDLGEWIGATSHGLF
Sbjct: 1494 VDELHLLGSDKGHVLEVIVSRMRRISSHIGSNIRIVALSASLANAKDLGEWIGATSHGLF 1553

Query: 2205 NFPPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARL 2026
            NFPP VRPVPLEIHIQGVDI NFE RMQAM KPTYTAI QHAKN KPALV+VPTRKHARL
Sbjct: 1554 NFPPAVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAITQHAKNSKPALVYVPTRKHARL 1613

Query: 2025 TAVDLCTYSTSDTDKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDV 1846
            TA+DLC YS+ +     F              ++++TLK TL  GVGYLHEGL+  DQ++
Sbjct: 1614 TALDLCAYSSVEGAGTPFLLGSEDEMDTFTRGVEEETLKNTLKCGVGYLHEGLSELDQEL 1673

Query: 1845 VLNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHA 1666
            V  LF+GGRIQVCV+SS+MCWG+P+PAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHA
Sbjct: 1674 VTQLFLGGRIQVCVASSTMCWGRPLPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHA 1733

Query: 1665 SRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDA 1486
            SRPL DNSGKCVILCHAPRKEYYKKFL+EAFPVES+LHHFLHDH+NAEVVVGVVENKQDA
Sbjct: 1734 SRPLQDNSGKCVILCHAPRKEYYKKFLFEAFPVESNLHHFLHDHMNAEVVVGVVENKQDA 1793

Query: 1485 VDYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLK 1306
            VDYLTWTFMYRRLTKNPN+YNLQGVSHRHLSDHLS+LVE  L+DLESSKCVAIEEDMYLK
Sbjct: 1794 VDYLTWTFMYRRLTKNPNFYNLQGVSHRHLSDHLSELVETVLNDLESSKCVAIEEDMYLK 1853

Query: 1305 PLNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKL 1126
            PLNLGLIA         IERFSS LTQKTK+KGLL+ILASASEYAELP RPGEEE I +L
Sbjct: 1854 PLNLGLIASYYYISYTTIERFSSMLTQKTKVKGLLEILASASEYAELPGRPGEEEFIERL 1913

Query: 1125 INHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVIS 946
            + HQRFS E PK  DPHVKANALLQAHFSRHTVVGNLAADQRE+LLSAHRLLQAMVDVIS
Sbjct: 1914 VRHQRFSIEKPKYGDPHVKANALLQAHFSRHTVVGNLAADQREILLSAHRLLQAMVDVIS 1973

Query: 945  SNGWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXX 766
            SNGWL LALS MELSQMVTQGMW+RD +LLQ+PHFTK+LA+RCQEN G+ IE++F     
Sbjct: 1974 SNGWLSLALSAMELSQMVTQGMWDRDSVLLQVPHFTKDLARRCQENEGKPIESIFDLAEM 2033

Query: 765  XXXXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQ 586
                    LQ+S+SQL +I +F  RFPN+DM+YEV + DDI  G+NVT+QVTLER++   
Sbjct: 2034 GVDEMRDLLQLSNSQLQDIIEFFKRFPNVDMTYEVREGDDITAGDNVTVQVTLERDMT-N 2092

Query: 585  TQSEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKK 406
              SEVG V+APRFPK KEEGWWLV+GD+ TNQLLAIKRV+LQ+R++VKL FSAP E G+K
Sbjct: 2093 VSSEVGPVHAPRFPKPKEEGWWLVIGDSSTNQLLAIKRVALQKRARVKLEFSAPAEAGRK 2152

Query: 405  SYMIYFMCDSYLGCDQEYSFTIDVKEGG 322
             YMIY M DSYLGCDQEY FT+DVK+ G
Sbjct: 2153 DYMIYLMSDSYLGCDQEYEFTVDVKDAG 2180



 Score =  301 bits (770), Expect = 4e-78
 Identities = 202/675 (29%), Positives = 334/675 (49%), Gaps = 18/675 (2%)
 Frame = -1

Query: 2781 YGSFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGLE-------- 2626
            +      N +Q++V+       DN+L+ APTG+GKT      +L+  Q GL         
Sbjct: 516  FDGMTQLNRVQSRVYDTALFKPDNILLCAPTGAGKTNVAVLTILQ--QIGLHMQDDGQFD 573

Query: 2625 --NMRAVYIAPIEALAKERYREWKEKFGQGLGINVVELTGETAADLKSLEKGNIIISTPE 2452
                + VY+AP++AL  E       +   G  + V EL+G+     + +++  II++TPE
Sbjct: 574  NTKYKIVYVAPMKALVAEVVGNLSNRLA-GYNVTVRELSGDQNLTKQQIDETQIIVTTPE 632

Query: 2451 KWDALSRRWKQRKHVQQVSLFIVDELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVAL 2272
            KWD ++R+   R + Q V L I+DE+HL+    GPVLE IV+R  R       +IR+V L
Sbjct: 633  KWDIVTRKSGDRTYTQMVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGL 692

Query: 2271 SASLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAI 2092
            SA+L N +D+  ++      LF F    RP PL     G+ +     RMQ M +  Y  +
Sbjct: 693  SATLPNYEDVALFLRVRKESLFYFDNSYRPCPLAQQYIGITVRKPLQRMQLMNEICYEKV 752

Query: 2091 VQHAKNGKPALVFVPTRKHARLTAVDLC-TYSTSDTDKPSFXXXXXXXXXXXXSA--IKD 1921
            +  A   +  L+FV +RK    TA  +  T   +DT                  A  +K+
Sbjct: 753  MAAAGKHQ-VLIFVHSRKETAKTAKAIRDTALANDTVSRFLKNESASQEILGTHAELVKN 811

Query: 1920 DTLKRTLPLGVGYLHEGLNSYDQDVVLNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGT 1741
            + LK  LP G    H G+   D+++V  LF    IQV VS++++ WG  +PAH V++ GT
Sbjct: 812  NDLKDLLPYGFAIHHAGMARVDRELVEELFADKHIQVLVSTATLAWGVNLPAHTVIIKGT 871

Query: 1740 QYYDGRENAHTDYPITDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVES 1561
            Q Y+  + A T+    D++QM+G A RP  D  G+ +IL      ++Y   + +  P+ES
Sbjct: 872  QIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTHGEGIILTGHSELQFYLSLMNQQLPIES 931

Query: 1560 HLHHFLHDHLNAEVVVGVVENKQDAVDYLTWTFMYRRLTKNPNYYNLQG---VSHRHLSD 1390
                 L D LNAE+V+G ++N ++A  +L +T++Y R+ +NP  Y L      S + L +
Sbjct: 932  QFISKLADQLNAEIVLGTIQNAREACSWLGYTYLYIRMLRNPTLYGLPADILESDKTLDE 991

Query: 1389 HLSDLVENALSDLESSKCVAIEEDM-YLKPLNLGLIAXXXXXXXXXIERFSSSLTQKTKM 1213
              +DL+ +A + L+ +  +  +    Y +  +LG IA         I  ++  L      
Sbjct: 992  RRADLIHSAANLLDRNNLIKYDRKTGYFQVTDLGRIASYYYISHGTISTYNEYLKPTMGD 1051

Query: 1212 KGLLDILASASEYAELPIRPGEEELIRKLINHQRFSFENPKCTDPHVKANALLQAHFSRH 1033
              L  + + + E+  + +R  E+  + KL++      +     +P  K N LLQA+ SR 
Sbjct: 1052 IELCRLFSLSEEFKYVGVRLDEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQAYISRL 1110

Query: 1032 TVVG-NLAADQREVLLSAHRLLQAMVDVISSNGWLGLALSTMELSQMVTQGMWERDPMLL 856
             + G +L++D   +  SA RLL+A+ +++   GW  LA   + L +MV + MW     L 
Sbjct: 1111 KLEGLSLSSDMVYIRQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVDKQMWSVQTPLR 1170

Query: 855  QLPHFTKELAKRCQE 811
            Q     KE+  + ++
Sbjct: 1171 QFTGIPKEILMKLEK 1185


>gb|KJB73065.1| hypothetical protein B456_011G217300 [Gossypium raimondii]
          Length = 2053

 Score = 2268 bits (5878), Expect = 0.0
 Identities = 1121/1355 (82%), Positives = 1219/1355 (89%), Gaps = 5/1355 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            +VE+LF DGHVQVLVSTATLAWGVNLPAHTVIIKGTQIY+PEKGAWTELSPLDVMQMLGR
Sbjct: 700  IVEELFGDGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYSPEKGAWTELSPLDVMQMLGR 759

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQYDSYGEGII+TGHSELQYYLSLMNQQLPIESQF+SKLADQLNAEIVLGTVQNARE
Sbjct: 760  AGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNARE 819

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            AC WIGYTYLYIRMLRNPTLYGLPAD+L RD TLEERRADLIHSAA+ILDKNNLVKYDRK
Sbjct: 820  ACNWIGYTYLYIRMLRNPTLYGLPADVLSRDLTLEERRADLIHSAATILDKNNLVKYDRK 879

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            SGYFQVTDLGRIASYYYITHGTISTYNE+LKPT GDIEL RLFSLSEEF+YV+VRQDEKM
Sbjct: 880  SGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFRYVTVRQDEKM 939

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIP+KES+EEPSAKINVLLQAYISQLKLEGLSLTSDMV+I QSAGRLLRAL
Sbjct: 940  ELAKLLDRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLLRAL 999

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIVLKRGWAQLAEKALNLCKMV KR+W+VQTPLRQF+GIPNEILMKLEKKDL W+RYYD
Sbjct: 1000 FEIVLKRGWAQLAEKALNLCKMVTKRMWNVQTPLRQFNGIPNEILMKLEKKDLAWDRYYD 1059

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQEIGELIRY KMGR L++ IHQ PK+NLAAHVQPITRTVL  ELTITPDFQW+DKVH
Sbjct: 1060 LSSQEIGELIRYPKMGRTLYRFIHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVH 1119

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            GYVEPFWVI+EDNDGEYILHHEYF+LKKQYI+EDHTLNFTVPIYEPLPPQYFIRVVSD+W
Sbjct: 1120 GYVEPFWVIIEDNDGEYILHHEYFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKW 1179

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQTVLP+ FRHLILPEKYPPPTELLDLQPLPVTALRNP YE LY  FKHFNP+QTQVF
Sbjct: 1180 LGSQTVLPISFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVF 1239

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGLEN-MRAVYIAPIEALAKERYREWK 2560
            TVLYNTDDNVLVAAPTGSGKTIC EFA+LRNHQKG ++ +R VYIAP+EA+AKERYR+W+
Sbjct: 1240 TVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPDSTLRVVYIAPLEAIAKERYRDWE 1299

Query: 2559 EKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVD 2380
             KFG+GLG+ VVELTGE A DLK LEKG +IISTPEKWDALSRRWKQRK VQQVSLFIVD
Sbjct: 1300 RKFGKGLGMRVVELTGELAMDLKLLEKGQVIISTPEKWDALSRRWKQRKFVQQVSLFIVD 1359

Query: 2379 ELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF 2200
            ELHLIGGQ GPVLE+IVSRMR IAS +   IRIVALS SLANAKDLGEWIGA+SHGLFNF
Sbjct: 1360 ELHLIGGQGGPVLEVIVSRMRYIASQVEKKIRIVALSTSLANAKDLGEWIGASSHGLFNF 1419

Query: 2199 PPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTA 2020
            PPGVRPVPLEIHIQGVDI NFE RMQAM KPT+TAIVQHAK GKPA+V+VPTRKH RLTA
Sbjct: 1420 PPGVRPVPLEIHIQGVDIANFEARMQAMTKPTFTAIVQHAKGGKPAIVYVPTRKHVRLTA 1479

Query: 2019 VDLCTYSTSDT-DKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDVV 1843
            VDL +YS  D  D+P+F              I ++TL+ TL  GVGYLHEGLNS DQ+VV
Sbjct: 1480 VDLMSYSKVDNEDEPAFRLRSAEELKPFVDKISEETLRTTLEYGVGYLHEGLNSLDQEVV 1539

Query: 1842 LNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHAS 1663
              LF  G IQVCV SS++CWG P+ AHLVVVMGTQYYDGRENAHTDYP+TDLLQMMGHAS
Sbjct: 1540 SQLFEAGWIQVCVMSSALCWGVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHAS 1599

Query: 1662 RPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAV 1483
            RPL+DNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHD+ NAE+V  V+ENKQDAV
Sbjct: 1600 RPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNFNAEIVATVIENKQDAV 1659

Query: 1482 DYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLKP 1303
            DYLTWTFMYRRLT+NPNYYNLQGVSHRHLSDHLS+LVEN L+DLE+SKC+ IE+DM L P
Sbjct: 1660 DYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLNDLEASKCITIEDDMDLSP 1719

Query: 1302 LNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLI 1123
            LNLG+IA         IERFSSSLT KTKMKGLL+ILASASEYA LPIRPGEEE++R+LI
Sbjct: 1720 LNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEYANLPIRPGEEEVLRRLI 1779

Query: 1122 NHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVISS 943
            NHQRFSF+NP+CTDPHVKANALLQAHFSR  V GNL+ DQREVLL A RLLQAMVDVISS
Sbjct: 1780 NHQRFSFDNPRCTDPHVKANALLQAHFSRQHVGGNLSLDQREVLLFATRLLQAMVDVISS 1839

Query: 942  NGWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXXX 763
            NGWL LAL  ME+SQMVTQGMWERD MLLQLP+FTKELAKRCQENPG++IET+F      
Sbjct: 1840 NGWLSLALLAMEVSQMVTQGMWERDSMLLQLPYFTKELAKRCQENPGKNIETIFDLVEME 1899

Query: 762  XXXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQT 583
                   LQMSD QL +IA+FCNRFPNID+SYEV+DSD++R GE VTLQVTLER+LEG+T
Sbjct: 1900 DDERRELLQMSDLQLLDIAKFCNRFPNIDLSYEVIDSDNVRAGEYVTLQVTLERDLEGKT 1959

Query: 582  QSEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKKS 403
              EVG V APR+PK K+EGWWLVVGDT +NQLLAIKRVSLQR++KVKL F+APTE  +K+
Sbjct: 1960 --EVGPVDAPRYPKAKDEGWWLVVGDTNSNQLLAIKRVSLQRKAKVKLEFAAPTEATEKA 2017

Query: 402  YMIYFMCDSYLGCDQEYSFTIDVKEG---GEGDGA 307
            Y +YFMCDSYLGCDQEYSFT+DVKE    GE  G+
Sbjct: 2018 YTLYFMCDSYLGCDQEYSFTVDVKEAARPGEDSGS 2052



 Score =  304 bits (778), Expect = 5e-79
 Identities = 201/674 (29%), Positives = 339/674 (50%), Gaps = 17/674 (2%)
 Frame = -1

Query: 2781 YGSFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGLE-------- 2626
            +   +  N +Q++V+     + DN+L+ APTG+GKT      +L+     ++        
Sbjct: 379  FKGMQQLNRVQSKVYETALFSADNILLCAPTGAGKTNVAVLTILQQLALNMDADGSINHG 438

Query: 2625 NMRAVYIAPIEALAKERYREWKEKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKW 2446
            N + VY+AP++AL  E       +  +  G+ V EL+G+     + +++  II++TPEKW
Sbjct: 439  NYKIVYVAPMKALVAEVVGNLSHRL-EAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKW 497

Query: 2445 DALSRRWKQRKHVQQVSLFIVDELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSA 2266
            D ++R+   R + Q V L I+DE+HL+    GPVLE IV+R  R       +IR+V LSA
Sbjct: 498  DIITRKSGDRTYTQLVKLIIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSA 557

Query: 2265 SLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIV 2089
            +L N +D+  ++      GLF+F    RPVPL     G+ +     R Q M    Y  ++
Sbjct: 558  TLPNFEDVALFLRVNFEKGLFHFDNSYRPVPLSQQYIGITVKKPLQRFQLMNDICYEKVM 617

Query: 2088 QHAKNGKPALVFVPTRKHARLTAVDLCTYSTSDTDKPSFXXXXXXXXXXXXS---AIKDD 1918
              A   +  L+FV +RK    TA  +   + ++     F            S    +K +
Sbjct: 618  AVAGKHQ-VLIFVHSRKETAKTARAVRDTALANDTLSRFLKEDAASREILQSHTDMVKSN 676

Query: 1917 TLKRTLPLGVGYLHEGLNSYDQDVVLNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQ 1738
             LK  LP G    H GL   D+ +V  LF  G +QV VS++++ WG  +PAH V++ GTQ
Sbjct: 677  DLKDLLPYGFAIHHAGLARTDRQIVEELFGDGHVQVLVSTATLAWGVNLPAHTVIIKGTQ 736

Query: 1737 YYDGRENAHTDYPITDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESH 1558
             Y   + A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+ES 
Sbjct: 737  IYSPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQ 796

Query: 1557 LHHFLHDHLNAEVVVGVVENKQDAVDYLTWTFMYRRLTKNPNYYNLQG-VSHRHLS--DH 1387
                L D LNAE+V+G V+N ++A +++ +T++Y R+ +NP  Y L   V  R L+  + 
Sbjct: 797  FISKLADQLNAEIVLGTVQNAREACNWIGYTYLYIRMLRNPTLYGLPADVLSRDLTLEER 856

Query: 1386 LSDLVENALSDLESSKCVAIE-EDMYLKPLNLGLIAXXXXXXXXXIERFSSSLTQKTKMK 1210
             +DL+ +A + L+ +  V  + +  Y +  +LG IA         I  ++  L       
Sbjct: 857  RADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDI 916

Query: 1209 GLLDILASASEYAELPIRPGEEELIRKLINHQRFSFENPKCTDPHVKANALLQAHFSRHT 1030
             L  + + + E+  + +R  E+  + KL++      +     +P  K N LLQA+ S+  
Sbjct: 917  ELCRLFSLSEEFRYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLK 975

Query: 1029 VVG-NLAADQREVLLSAHRLLQAMVDVISSNGWLGLALSTMELSQMVTQGMWERDPMLLQ 853
            + G +L +D   +  SA RLL+A+ +++   GW  LA   + L +MVT+ MW     L Q
Sbjct: 976  LEGLSLTSDMVYITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVTKRMWNVQTPLRQ 1035

Query: 852  LPHFTKELAKRCQE 811
                  E+  + ++
Sbjct: 1036 FNGIPNEILMKLEK 1049


>ref|XP_012454175.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Gossypium raimondii] gi|763806125|gb|KJB73063.1|
            hypothetical protein B456_011G217300 [Gossypium
            raimondii] gi|763806126|gb|KJB73064.1| hypothetical
            protein B456_011G217300 [Gossypium raimondii]
          Length = 2177

 Score = 2268 bits (5878), Expect = 0.0
 Identities = 1121/1355 (82%), Positives = 1219/1355 (89%), Gaps = 5/1355 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            +VE+LF DGHVQVLVSTATLAWGVNLPAHTVIIKGTQIY+PEKGAWTELSPLDVMQMLGR
Sbjct: 824  IVEELFGDGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYSPEKGAWTELSPLDVMQMLGR 883

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQYDSYGEGII+TGHSELQYYLSLMNQQLPIESQF+SKLADQLNAEIVLGTVQNARE
Sbjct: 884  AGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNARE 943

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            AC WIGYTYLYIRMLRNPTLYGLPAD+L RD TLEERRADLIHSAA+ILDKNNLVKYDRK
Sbjct: 944  ACNWIGYTYLYIRMLRNPTLYGLPADVLSRDLTLEERRADLIHSAATILDKNNLVKYDRK 1003

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            SGYFQVTDLGRIASYYYITHGTISTYNE+LKPT GDIEL RLFSLSEEF+YV+VRQDEKM
Sbjct: 1004 SGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFRYVTVRQDEKM 1063

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIP+KES+EEPSAKINVLLQAYISQLKLEGLSLTSDMV+I QSAGRLLRAL
Sbjct: 1064 ELAKLLDRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLLRAL 1123

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIVLKRGWAQLAEKALNLCKMV KR+W+VQTPLRQF+GIPNEILMKLEKKDL W+RYYD
Sbjct: 1124 FEIVLKRGWAQLAEKALNLCKMVTKRMWNVQTPLRQFNGIPNEILMKLEKKDLAWDRYYD 1183

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQEIGELIRY KMGR L++ IHQ PK+NLAAHVQPITRTVL  ELTITPDFQW+DKVH
Sbjct: 1184 LSSQEIGELIRYPKMGRTLYRFIHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVH 1243

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            GYVEPFWVI+EDNDGEYILHHEYF+LKKQYI+EDHTLNFTVPIYEPLPPQYFIRVVSD+W
Sbjct: 1244 GYVEPFWVIIEDNDGEYILHHEYFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKW 1303

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQTVLP+ FRHLILPEKYPPPTELLDLQPLPVTALRNP YE LY  FKHFNP+QTQVF
Sbjct: 1304 LGSQTVLPISFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVF 1363

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGLEN-MRAVYIAPIEALAKERYREWK 2560
            TVLYNTDDNVLVAAPTGSGKTIC EFA+LRNHQKG ++ +R VYIAP+EA+AKERYR+W+
Sbjct: 1364 TVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPDSTLRVVYIAPLEAIAKERYRDWE 1423

Query: 2559 EKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVD 2380
             KFG+GLG+ VVELTGE A DLK LEKG +IISTPEKWDALSRRWKQRK VQQVSLFIVD
Sbjct: 1424 RKFGKGLGMRVVELTGELAMDLKLLEKGQVIISTPEKWDALSRRWKQRKFVQQVSLFIVD 1483

Query: 2379 ELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF 2200
            ELHLIGGQ GPVLE+IVSRMR IAS +   IRIVALS SLANAKDLGEWIGA+SHGLFNF
Sbjct: 1484 ELHLIGGQGGPVLEVIVSRMRYIASQVEKKIRIVALSTSLANAKDLGEWIGASSHGLFNF 1543

Query: 2199 PPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTA 2020
            PPGVRPVPLEIHIQGVDI NFE RMQAM KPT+TAIVQHAK GKPA+V+VPTRKH RLTA
Sbjct: 1544 PPGVRPVPLEIHIQGVDIANFEARMQAMTKPTFTAIVQHAKGGKPAIVYVPTRKHVRLTA 1603

Query: 2019 VDLCTYSTSDT-DKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDVV 1843
            VDL +YS  D  D+P+F              I ++TL+ TL  GVGYLHEGLNS DQ+VV
Sbjct: 1604 VDLMSYSKVDNEDEPAFRLRSAEELKPFVDKISEETLRTTLEYGVGYLHEGLNSLDQEVV 1663

Query: 1842 LNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHAS 1663
              LF  G IQVCV SS++CWG P+ AHLVVVMGTQYYDGRENAHTDYP+TDLLQMMGHAS
Sbjct: 1664 SQLFEAGWIQVCVMSSALCWGVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHAS 1723

Query: 1662 RPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAV 1483
            RPL+DNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHD+ NAE+V  V+ENKQDAV
Sbjct: 1724 RPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNFNAEIVATVIENKQDAV 1783

Query: 1482 DYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLKP 1303
            DYLTWTFMYRRLT+NPNYYNLQGVSHRHLSDHLS+LVEN L+DLE+SKC+ IE+DM L P
Sbjct: 1784 DYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLNDLEASKCITIEDDMDLSP 1843

Query: 1302 LNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLI 1123
            LNLG+IA         IERFSSSLT KTKMKGLL+ILASASEYA LPIRPGEEE++R+LI
Sbjct: 1844 LNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEYANLPIRPGEEEVLRRLI 1903

Query: 1122 NHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVISS 943
            NHQRFSF+NP+CTDPHVKANALLQAHFSR  V GNL+ DQREVLL A RLLQAMVDVISS
Sbjct: 1904 NHQRFSFDNPRCTDPHVKANALLQAHFSRQHVGGNLSLDQREVLLFATRLLQAMVDVISS 1963

Query: 942  NGWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXXX 763
            NGWL LAL  ME+SQMVTQGMWERD MLLQLP+FTKELAKRCQENPG++IET+F      
Sbjct: 1964 NGWLSLALLAMEVSQMVTQGMWERDSMLLQLPYFTKELAKRCQENPGKNIETIFDLVEME 2023

Query: 762  XXXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQT 583
                   LQMSD QL +IA+FCNRFPNID+SYEV+DSD++R GE VTLQVTLER+LEG+T
Sbjct: 2024 DDERRELLQMSDLQLLDIAKFCNRFPNIDLSYEVIDSDNVRAGEYVTLQVTLERDLEGKT 2083

Query: 582  QSEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKKS 403
              EVG V APR+PK K+EGWWLVVGDT +NQLLAIKRVSLQR++KVKL F+APTE  +K+
Sbjct: 2084 --EVGPVDAPRYPKAKDEGWWLVVGDTNSNQLLAIKRVSLQRKAKVKLEFAAPTEATEKA 2141

Query: 402  YMIYFMCDSYLGCDQEYSFTIDVKEG---GEGDGA 307
            Y +YFMCDSYLGCDQEYSFT+DVKE    GE  G+
Sbjct: 2142 YTLYFMCDSYLGCDQEYSFTVDVKEAARPGEDSGS 2176



 Score =  304 bits (778), Expect = 5e-79
 Identities = 201/674 (29%), Positives = 339/674 (50%), Gaps = 17/674 (2%)
 Frame = -1

Query: 2781 YGSFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGLE-------- 2626
            +   +  N +Q++V+     + DN+L+ APTG+GKT      +L+     ++        
Sbjct: 503  FKGMQQLNRVQSKVYETALFSADNILLCAPTGAGKTNVAVLTILQQLALNMDADGSINHG 562

Query: 2625 NMRAVYIAPIEALAKERYREWKEKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKW 2446
            N + VY+AP++AL  E       +  +  G+ V EL+G+     + +++  II++TPEKW
Sbjct: 563  NYKIVYVAPMKALVAEVVGNLSHRL-EAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKW 621

Query: 2445 DALSRRWKQRKHVQQVSLFIVDELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSA 2266
            D ++R+   R + Q V L I+DE+HL+    GPVLE IV+R  R       +IR+V LSA
Sbjct: 622  DIITRKSGDRTYTQLVKLIIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSA 681

Query: 2265 SLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIV 2089
            +L N +D+  ++      GLF+F    RPVPL     G+ +     R Q M    Y  ++
Sbjct: 682  TLPNFEDVALFLRVNFEKGLFHFDNSYRPVPLSQQYIGITVKKPLQRFQLMNDICYEKVM 741

Query: 2088 QHAKNGKPALVFVPTRKHARLTAVDLCTYSTSDTDKPSFXXXXXXXXXXXXS---AIKDD 1918
              A   +  L+FV +RK    TA  +   + ++     F            S    +K +
Sbjct: 742  AVAGKHQ-VLIFVHSRKETAKTARAVRDTALANDTLSRFLKEDAASREILQSHTDMVKSN 800

Query: 1917 TLKRTLPLGVGYLHEGLNSYDQDVVLNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQ 1738
             LK  LP G    H GL   D+ +V  LF  G +QV VS++++ WG  +PAH V++ GTQ
Sbjct: 801  DLKDLLPYGFAIHHAGLARTDRQIVEELFGDGHVQVLVSTATLAWGVNLPAHTVIIKGTQ 860

Query: 1737 YYDGRENAHTDYPITDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESH 1558
             Y   + A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+ES 
Sbjct: 861  IYSPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQ 920

Query: 1557 LHHFLHDHLNAEVVVGVVENKQDAVDYLTWTFMYRRLTKNPNYYNLQG-VSHRHLS--DH 1387
                L D LNAE+V+G V+N ++A +++ +T++Y R+ +NP  Y L   V  R L+  + 
Sbjct: 921  FISKLADQLNAEIVLGTVQNAREACNWIGYTYLYIRMLRNPTLYGLPADVLSRDLTLEER 980

Query: 1386 LSDLVENALSDLESSKCVAIE-EDMYLKPLNLGLIAXXXXXXXXXIERFSSSLTQKTKMK 1210
             +DL+ +A + L+ +  V  + +  Y +  +LG IA         I  ++  L       
Sbjct: 981  RADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDI 1040

Query: 1209 GLLDILASASEYAELPIRPGEEELIRKLINHQRFSFENPKCTDPHVKANALLQAHFSRHT 1030
             L  + + + E+  + +R  E+  + KL++      +     +P  K N LLQA+ S+  
Sbjct: 1041 ELCRLFSLSEEFRYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLK 1099

Query: 1029 VVG-NLAADQREVLLSAHRLLQAMVDVISSNGWLGLALSTMELSQMVTQGMWERDPMLLQ 853
            + G +L +D   +  SA RLL+A+ +++   GW  LA   + L +MVT+ MW     L Q
Sbjct: 1100 LEGLSLTSDMVYITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVTKRMWNVQTPLRQ 1159

Query: 852  LPHFTKELAKRCQE 811
                  E+  + ++
Sbjct: 1160 FNGIPNEILMKLEK 1173


>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera] gi|731390985|ref|XP_010650581.1| PREDICTED: U5
            small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera] gi|731390987|ref|XP_010650582.1| PREDICTED: U5
            small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score = 2268 bits (5878), Expect = 0.0
 Identities = 1127/1345 (83%), Positives = 1216/1345 (90%), Gaps = 2/1345 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            LVE+LFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR
Sbjct: 827  LVEELFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 886

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQYDSYGEGII+TGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE
Sbjct: 887  AGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 946

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            AC+WIGYTYLY+RMLRNPTLYGL  D L RD TLEERRADLIHSAA ILD+NNLVKYDRK
Sbjct: 947  ACSWIGYTYLYVRMLRNPTLYGLSHDALTRDITLEERRADLIHSAAIILDRNNLVKYDRK 1006

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            SGYFQVTDLGRIASYYYITHGTISTYNE+LKPT GDIEL RLFSLSEEFKYV+VRQDEKM
Sbjct: 1007 SGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKM 1066

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIP+KES+EEPSAKINVLLQAYISQLKLEGLSLTSDMVFI QSAGRL+RAL
Sbjct: 1067 ELAKLLDRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLVRAL 1126

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIVLKRGWAQL EKALNLCKMV+KR+WSVQTPLRQF+ IPNEILMKLEKKDL WERYYD
Sbjct: 1127 FEIVLKRGWAQLTEKALNLCKMVNKRMWSVQTPLRQFNAIPNEILMKLEKKDLAWERYYD 1186

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQE+GELIRY KMGR LHK IHQ PK++LAAHVQPITRTVL  ELTITPDFQW+DKVH
Sbjct: 1187 LSSQELGELIRYPKMGRTLHKFIHQFPKLDLAAHVQPITRTVLRVELTITPDFQWEDKVH 1246

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            G+VEPFWVIVEDNDGEYILHHEYF++KKQYI+E HTLNFTVPIYEPLPPQYFIRVVSDRW
Sbjct: 1247 GFVEPFWVIVEDNDGEYILHHEYFMMKKQYIDEVHTLNFTVPIYEPLPPQYFIRVVSDRW 1306

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQ+VLPV FRHLILPEKYPPPTELLDLQPLPVTALRNP YE LY  FKHFNPIQTQVF
Sbjct: 1307 LGSQSVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEALYQEFKHFNPIQTQVF 1366

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGLEN-MRAVYIAPIEALAKERYREWK 2560
            TVLYNTDDNVLVAAPTGSGKTIC EFA+LRNHQKG E+ +RAVYIAPIEALAKERYR+W+
Sbjct: 1367 TVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGSESIVRAVYIAPIEALAKERYRDWE 1426

Query: 2559 EKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVD 2380
             KFG+GLG+ VVELTGETA DLK LE+G +IISTPEKWDALSRRWKQRKHVQQVSLFI+D
Sbjct: 1427 RKFGRGLGMRVVELTGETATDLKLLERGQVIISTPEKWDALSRRWKQRKHVQQVSLFIID 1486

Query: 2379 ELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF 2200
            ELHLIGGQ GPVLE+IVSRMR IAS   + IRIVALS SLANAKDLGEWIGATSHGLFNF
Sbjct: 1487 ELHLIGGQGGPVLEVIVSRMRYIASQGENKIRIVALSTSLANAKDLGEWIGATSHGLFNF 1546

Query: 2199 PPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTA 2020
            PPGVRPVPLEIHIQGVDI NFE RMQAM KPTYTAIVQHAKN KPA+VFVPTRKH RLTA
Sbjct: 1547 PPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNRKPAIVFVPTRKHVRLTA 1606

Query: 2019 VDLCTYSTSD-TDKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDVV 1843
            VDL TYS++D  + P+F              I+++ L+ TL  GVGYLHEGL   DQ+VV
Sbjct: 1607 VDLTTYSSADGGENPTFLLRSPEELEPFVGKIQEEMLRATLRHGVGYLHEGLTGMDQEVV 1666

Query: 1842 LNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHAS 1663
              LF  G IQVCV SSS+CWG P+ AHLVVVMGTQYYDGRENAHTDYP+TDLLQMMGHAS
Sbjct: 1667 SQLFEAGWIQVCVMSSSLCWGVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHAS 1726

Query: 1662 RPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAV 1483
            RPL+DNSGKCVILCHAPRKEYYKKFLYEAFPVESHL H+LHD+LNAE+VVGV+ENKQDAV
Sbjct: 1727 RPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLQHYLHDNLNAEIVVGVIENKQDAV 1786

Query: 1482 DYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLKP 1303
            DYLTWTFMYRRLT+NPNYYNLQGVSHRHLSDHLS+ VEN LSDLE+SKCVAIE+DM L P
Sbjct: 1787 DYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSESVENTLSDLEASKCVAIEDDMDLSP 1846

Query: 1302 LNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLI 1123
            LNLG+IA         IERFSSSLT KTKMKGLL+ILASASEYA++PIRPGEE+LIR+LI
Sbjct: 1847 LNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEYAQIPIRPGEEDLIRRLI 1906

Query: 1122 NHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVISS 943
            NHQRFSFENPKCTDPH+KANALLQAHFSR  V GNLA DQREVLLSA RLLQAMVDVISS
Sbjct: 1907 NHQRFSFENPKCTDPHIKANALLQAHFSRQIVGGNLALDQREVLLSAGRLLQAMVDVISS 1966

Query: 942  NGWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXXX 763
            NGWL LAL  ME+SQMVTQGMWERD MLLQLPHFTK+LAKRCQENPG+SIETVF      
Sbjct: 1967 NGWLNLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKRCQENPGKSIETVFDLVEME 2026

Query: 762  XXXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQT 583
                   LQMSDSQL +IA+FCNRFPNID++YEVLDS+++R G+++TLQV LER+LEG+T
Sbjct: 2027 DDERRELLQMSDSQLLDIARFCNRFPNIDITYEVLDSENLRAGDDITLQVMLERDLEGRT 2086

Query: 582  QSEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKKS 403
              EVG V APR+PK KEEGWWLVVGDT +NQLLAIKRV+LQR+SKVKL F+ P E G+KS
Sbjct: 2087 --EVGSVDAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVALQRKSKVKLEFAVPAEAGRKS 2144

Query: 402  YMIYFMCDSYLGCDQEYSFTIDVKE 328
            Y +YFMCDSYLGCDQEYSF++DV +
Sbjct: 2145 YTLYFMCDSYLGCDQEYSFSVDVMD 2169



 Score =  300 bits (768), Expect = 7e-78
 Identities = 236/853 (27%), Positives = 399/853 (46%), Gaps = 24/853 (2%)
 Frame = -1

Query: 2853 PPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKT 2674
            P  EL+ +  +P  A      +  +      N +Q++V+     T +NVL+ APTG+GKT
Sbjct: 488  PGEELVKISAMPDWA------QPAFKGMTQLNRVQSKVYETALFTAENVLLCAPTGAGKT 541

Query: 2673 ------ICGEFALLRNHQKGLE--NMRAVYIAPIEALAKERYREWKEKFGQGLGINVVEL 2518
                  I  + AL RN        N + VY+AP++AL  E       +  Q   + V EL
Sbjct: 542  NVAMLTILQQIALNRNADGSFNHSNYKIVYVAPMKALVAEVVGNLSNRL-QHYDVKVKEL 600

Query: 2517 TGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVDELHLIGGQIGPVLE 2338
            +G+ +   + +E+  II++TPEKWD ++R+   R + Q V L IVDE+HL+    GPVLE
Sbjct: 601  SGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLLHDNRGPVLE 660

Query: 2337 IIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHI 2161
             IV+R  R       +IR+V LSA+L N +D+  ++      GLF+F    RP PL    
Sbjct: 661  SIVARTVRQIETTKEHIRLVGLSATLPNYEDVALFLRVDLKKGLFHFDNSYRPCPLAQQY 720

Query: 2160 QGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTAVDLCTYSTSDTDK 1981
             G+ +     R Q M    Y  ++  A   +  L+FV +RK    TA  +   + ++   
Sbjct: 721  IGITVKKPLQRFQLMNDVCYEKVMAVAGKHQ-VLIFVHSRKETAKTARAIRDTALANDTL 779

Query: 1980 PSFXXXXXXXXXXXXS---AIKDDTLKRTLPLGVGYLHEGLNSYDQDVVLNLFVGGRIQV 1810
              F            S    +K++ LK  LP G    H G+   D+ +V  LF  G +QV
Sbjct: 780  GRFLKEDSASREILHSHTELVKNNDLKDLLPYGFAIHHAGMARADRQLVEELFADGHVQV 839

Query: 1809 CVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHASRPLVDNSGKCV 1630
             VS++++ WG  +PAH V++ GTQ Y+  + A T+    D++QM+G A RP  D+ G+ +
Sbjct: 840  LVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGI 899

Query: 1629 ILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAVDYLTWTFMYRR 1450
            I+      +YY   + +  P+ES     L D LNAE+V+G V+N ++A  ++ +T++Y R
Sbjct: 900  IITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACSWIGYTYLYVR 959

Query: 1449 LTKNPNYYNLQGVSHRHLS------DHLSDLVENALSDLESSKCVAIE-EDMYLKPLNLG 1291
            + +NP  Y   G+SH  L+      +  +DL+ +A   L+ +  V  + +  Y +  +LG
Sbjct: 960  MLRNPTLY---GLSHDALTRDITLEERRADLIHSAAIILDRNNLVKYDRKSGYFQVTDLG 1016

Query: 1290 LIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLINHQR 1111
             IA         I  ++  L        L  + + + E+  + +R  E+  + KL++   
Sbjct: 1017 RIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVP 1076

Query: 1110 FSFENPKCTDPHVKANALLQAHFSRHTVVG-NLAADQREVLLSAHRLLQAMVDVISSNGW 934
               +     +P  K N LLQA+ S+  + G +L +D   +  SA RL++A+ +++   GW
Sbjct: 1077 IPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLVRALFEIVLKRGW 1135

Query: 933  LGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXXXXXX 754
              L    + L +MV + MW     L Q      E+  +  E    + E  +         
Sbjct: 1136 AQLTEKALNLCKMVNKRMWSVQTPLRQFNAIPNEILMKL-EKKDLAWERYYDLSSQELGE 1194

Query: 753  XXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQTQSE 574
                 +M  +    + +F ++FP +D++  V      R    V L +T + + E +    
Sbjct: 1195 LIRYPKMGRT----LHKFIHQFPKLDLAAHV--QPITRTVLRVELTITPDFQWEDKVHGF 1248

Query: 573  VGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRR---SKVKLVFSAPT-EVGKK 406
            V             E +W++V D     +L  +   ++++       L F+ P  E    
Sbjct: 1249 V-------------EPFWVIVEDNDGEYILHHEYFMMKKQYIDEVHTLNFTVPIYEPLPP 1295

Query: 405  SYMIYFMCDSYLG 367
             Y I  + D +LG
Sbjct: 1296 QYFIRVVSDRWLG 1308


>ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Cicer
            arietinum] gi|502089221|ref|XP_004488846.1| PREDICTED: U5
            small nuclear ribonucleoprotein 200 kDa helicase [Cicer
            arietinum]
          Length = 2187

 Score = 2268 bits (5878), Expect = 0.0
 Identities = 1119/1349 (82%), Positives = 1212/1349 (89%), Gaps = 1/1349 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            LVEDLFADGH QVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR
Sbjct: 836  LVEDLFADGHAQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 895

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQYDSYGEGII+TGHSELQYYLSLMNQQLPIESQF+SKLADQLNAEIVLGTVQNA+E
Sbjct: 896  AGRPQYDSYGEGIIVTGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAKE 955

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            AC WIGYTYLY+RMLRNP+LYG+  D+L +D TLEERRADLIH+AA+ILD+NNLVKYDRK
Sbjct: 956  ACHWIGYTYLYVRMLRNPSLYGIAPDVLTKDITLEERRADLIHTAATILDRNNLVKYDRK 1015

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            SGYFQVTDLGRIASYYYITHGTISTYNE+LKPT GDIEL RLFSLSEEFKYV+VRQDEKM
Sbjct: 1016 SGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKM 1075

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIP+KES+EEPSAKINVLLQAYISQLKLEGLS+TSDMVFI QSAGRLLRAL
Sbjct: 1076 ELAKLLDRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSMTSDMVFITQSAGRLLRAL 1135

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIV+KRGWAQLAEKALNLCKMV KR+WSVQTPLRQF+GIPN+IL KLEKKDL WERYYD
Sbjct: 1136 FEIVVKRGWAQLAEKALNLCKMVTKRMWSVQTPLRQFNGIPNDILTKLEKKDLAWERYYD 1195

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQEIGELIR  KMGR LHK IHQ PK+NLAAHVQPITRTVLG ELT+TPDF WDD++H
Sbjct: 1196 LSSQEIGELIRAPKMGRTLHKFIHQFPKLNLAAHVQPITRTVLGVELTVTPDFAWDDRIH 1255

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            GYVEPFWVIVEDNDGEYILHHEYF+LKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSD+W
Sbjct: 1256 GYVEPFWVIVEDNDGEYILHHEYFLLKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDKW 1315

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQTVLPV FRHLILPEKYPPPTELLDLQPLPVTALRNP YE LY  FKHFNP+QTQVF
Sbjct: 1316 LGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEALYQEFKHFNPVQTQVF 1375

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGLEN-MRAVYIAPIEALAKERYREWK 2560
            TVLYN+DDNVLVAAPTGSGKTIC EFA+LRNHQKG ++ MR VYIAPIEALAKERYR+WK
Sbjct: 1376 TVLYNSDDNVLVAAPTGSGKTICAEFAILRNHQKGPDSVMRVVYIAPIEALAKERYRDWK 1435

Query: 2559 EKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVD 2380
            +KFG GL + VVELTGETA D+K LEKG IIISTPEKWDALSRRWKQRKHVQQVSLFI+D
Sbjct: 1436 KKFGGGLELRVVELTGETATDVKLLEKGQIIISTPEKWDALSRRWKQRKHVQQVSLFIID 1495

Query: 2379 ELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF 2200
            ELHLIGGQ GPVLE+IVSRMR IAS + + IRIVALS SLANAKDLGEWIGATSHGLFNF
Sbjct: 1496 ELHLIGGQGGPVLEVIVSRMRYIASQVENKIRIVALSTSLANAKDLGEWIGATSHGLFNF 1555

Query: 2199 PPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTA 2020
            PPGVRPVPLEIHIQGVDI NFE RMQAM KPTYTAI QHAKN KPALVFVPTRKH RLTA
Sbjct: 1556 PPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIAQHAKNRKPALVFVPTRKHVRLTA 1615

Query: 2019 VDLCTYSTSDTDKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDVVL 1840
            VD+ TYS +D+ +  F            + + D+ LK TL  GVGYLHEGL++ D D+V 
Sbjct: 1616 VDMITYSGADSSEKPFLLRPIEELEPFINKVSDEMLKVTLREGVGYLHEGLDNLDHDIVA 1675

Query: 1839 NLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHASR 1660
             LF  G IQVCV SSSMCWG  + AHLVVVMGTQYYDGRENA TDYP+TDLLQMMGHASR
Sbjct: 1676 QLFEAGWIQVCVLSSSMCWGVTLSAHLVVVMGTQYYDGRENAQTDYPVTDLLQMMGHASR 1735

Query: 1659 PLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAVD 1480
            PLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHD+LNAE+V G++ENKQDAVD
Sbjct: 1736 PLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNLNAEIVAGIIENKQDAVD 1795

Query: 1479 YLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLKPL 1300
            YLTWTFMYRRLT+NPNYYNLQGVSHRHLSDHLS++VEN LSDLE+SKCVAIE+DM L PL
Sbjct: 1796 YLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSEMVENTLSDLEASKCVAIEDDMDLSPL 1855

Query: 1299 NLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLIN 1120
            NLG+IA         IERFSSSLT KTKMKGLL++L+SASEYA LPIRPGE+EL+R+LIN
Sbjct: 1856 NLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEVLSSASEYAHLPIRPGEDELVRRLIN 1915

Query: 1119 HQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVISSN 940
            HQRFSFENPK TDPHVKANALLQAHFSR  V GNLA DQREVLLSA+RLLQAMVDVISSN
Sbjct: 1916 HQRFSFENPKVTDPHVKANALLQAHFSRQFVGGNLALDQREVLLSANRLLQAMVDVISSN 1975

Query: 939  GWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXXXX 760
            GWL +AL  ME+SQMVTQGMWERD MLLQLPHFTK+LAK+CQENPGRSIETVF       
Sbjct: 1976 GWLTMALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKKCQENPGRSIETVFDLLEMED 2035

Query: 759  XXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQTQ 580
                  L M+DSQL +IA+FCNRFPNID+SYE+LD+D++R GE++TLQVTLER+LEG+T 
Sbjct: 2036 DERRELLNMTDSQLLDIARFCNRFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKT- 2094

Query: 579  SEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKKSY 400
             EVG V APR+PK KEEGWWLVVGDT TN LLAIKRVSLQR+ K KL F+AP + GKKSY
Sbjct: 2095 -EVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSY 2153

Query: 399  MIYFMCDSYLGCDQEYSFTIDVKEGGEGD 313
            ++YFMCDSY+GCDQEY FT+DVKE   GD
Sbjct: 2154 VLYFMCDSYMGCDQEYGFTLDVKEADGGD 2182



 Score =  291 bits (745), Expect = 3e-75
 Identities = 231/851 (27%), Positives = 395/851 (46%), Gaps = 22/851 (2%)
 Frame = -1

Query: 2853 PPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKT 2674
            P  +L+ +  +P  A      +  +      N +Q++V+       DN+L+ APTG+GKT
Sbjct: 496  PNEKLVKISAMPDWA------QPAFKGMTQLNRVQSKVYETALFKPDNLLLCAPTGAGKT 549

Query: 2673 ------ICGEFALLRNHQKGLENMRA---VYIAPIEALAKERYREWKEKFGQGLGINVVE 2521
                  I  + A  RN   G  +  A   VY+AP++AL  E       +  +   + V E
Sbjct: 550  NVAVLTILQQIARHRNPNDGSIDHTAYKIVYVAPMKALVAEVVGNLSNRL-EKYDVKVRE 608

Query: 2520 LTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVDELHLIGGQIGPVL 2341
            L+G+ +   + +E+  II++TPEKWD ++R+   R + Q V L I+DE+HL+    GPVL
Sbjct: 609  LSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVL 668

Query: 2340 EIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIH 2164
            E IV+R  R        IR+V LSA+L N +D+  ++    + GLF F    RPVPL   
Sbjct: 669  ESIVARTVRQIETTKDYIRLVGLSATLPNYEDVALFLRVDLNKGLFYFDNSYRPVPLSQQ 728

Query: 2163 IQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTAVDLCTYSTSDTD 1984
              G+ +     R Q M    Y  ++  A   +  L+FV +RK    TA  +   + ++  
Sbjct: 729  YVGITVKKPLQRFQLMNDICYEKVMAVAGKHQ-VLIFVHSRKETAKTARAIRDAALANDT 787

Query: 1983 KPSFXXXXXXXXXXXXS---AIKDDTLKRTLPLGVGYLHEGLNSYDQDVVLNLFVGGRIQ 1813
               F            +    +K   LK  LP G    H G+   D+ +V +LF  G  Q
Sbjct: 788  LSRFLKEDSASREILHTHTDLVKSSDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHAQ 847

Query: 1812 VCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHASRPLVDNSGKC 1633
            V VS++++ WG  +PAH V++ GTQ Y+  + A T+    D++QM+G A RP  D+ G+ 
Sbjct: 848  VLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEG 907

Query: 1632 VILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAVDYLTWTFMYR 1453
            +I+      +YY   + +  P+ES     L D LNAE+V+G V+N ++A  ++ +T++Y 
Sbjct: 908  IIVTGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAKEACHWIGYTYLYV 967

Query: 1452 RLTKNPNYYNLQG---VSHRHLSDHLSDLVENALSDLESSKCVAIE-EDMYLKPLNLGLI 1285
            R+ +NP+ Y +          L +  +DL+  A + L+ +  V  + +  Y +  +LG I
Sbjct: 968  RMLRNPSLYGIAPDVLTKDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRI 1027

Query: 1284 AXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLINHQRFS 1105
            A         I  ++  L        L  + + + E+  + +R  E+  + KL++     
Sbjct: 1028 ASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIP 1087

Query: 1104 FENPKCTDPHVKANALLQAHFSRHTVVG-NLAADQREVLLSAHRLLQAMVDVISSNGWLG 928
             +     +P  K N LLQA+ S+  + G ++ +D   +  SA RLL+A+ +++   GW  
Sbjct: 1088 IKE-SLEEPSAKINVLLQAYISQLKLEGLSMTSDMVFITQSAGRLLRALFEIVVKRGWAQ 1146

Query: 927  LALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXXXXXXXX 748
            LA   + L +MVT+ MW     L Q      ++  +  E    + E  +           
Sbjct: 1147 LAEKALNLCKMVTKRMWSVQTPLRQFNGIPNDILTKL-EKKDLAWERYYDLSSQEIGELI 1205

Query: 747  XXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQTQSEVG 568
               +M  +    + +F ++FP ++++  V       LG  V L VT +   + +    V 
Sbjct: 1206 RAPKMGRT----LHKFIHQFPKLNLAAHVQPITRTVLG--VELTVTPDFAWDDRIHGYV- 1258

Query: 567  RVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRR---SKVKLVFSAPT-EVGKKSY 400
                        E +W++V D     +L  +   L+++       L F+ P  E     Y
Sbjct: 1259 ------------EPFWVIVEDNDGEYILHHEYFLLKKQYIEEDHTLNFTVPIYEPLPPQY 1306

Query: 399  MIYFMCDSYLG 367
             I  + D +LG
Sbjct: 1307 FIRVVSDKWLG 1317


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score = 2268 bits (5876), Expect = 0.0
 Identities = 1127/1345 (83%), Positives = 1215/1345 (90%), Gaps = 2/1345 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            LVE+LFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR
Sbjct: 794  LVEELFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 853

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQYDSYGEGII+TGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE
Sbjct: 854  AGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 913

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            AC+WIGYTYLY+RMLRNPTLYGL  D L RD TLEERRADLIHSAA ILD+NNLVKYDRK
Sbjct: 914  ACSWIGYTYLYVRMLRNPTLYGLSHDALTRDITLEERRADLIHSAAIILDRNNLVKYDRK 973

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            SGYFQVTDLGRIASYYYITHGTISTYNE+LKPT GDIEL RLFSLSEEFKYV+VRQDEKM
Sbjct: 974  SGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKM 1033

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIP+KES+EEPSAKINVLLQAYISQLKLEGLSLTSDMVFI QSAGRL+RAL
Sbjct: 1034 ELAKLLDRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLVRAL 1093

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIVLKRGWAQL EKALNLCKMV+KR+WSVQTPLRQF+ IPNEILMKLEKKDL WERYYD
Sbjct: 1094 FEIVLKRGWAQLTEKALNLCKMVNKRMWSVQTPLRQFNAIPNEILMKLEKKDLAWERYYD 1153

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQE+GELIRY KMGR LHK IHQ PK++LAAHVQPITRTVL  ELTITPDFQW+DKVH
Sbjct: 1154 LSSQELGELIRYPKMGRTLHKFIHQFPKLDLAAHVQPITRTVLRVELTITPDFQWEDKVH 1213

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            G+VEPFWVIVEDNDGEYILHHEYF++KKQYI+E HTLNFTVPIYEPLPPQYFIRVVSDRW
Sbjct: 1214 GFVEPFWVIVEDNDGEYILHHEYFMMKKQYIDEVHTLNFTVPIYEPLPPQYFIRVVSDRW 1273

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQ+VLPV FRHLILPEKYPPPTELLDLQPLPVTALRNP YE LY  FKHFNPIQTQVF
Sbjct: 1274 LGSQSVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEALYQEFKHFNPIQTQVF 1333

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGLEN-MRAVYIAPIEALAKERYREWK 2560
            TVLYNTDDNVLVAAPTGSGKTIC EFA+LRNHQKG E+ +RAVYIAPIEALAKERYR+W+
Sbjct: 1334 TVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGSESIVRAVYIAPIEALAKERYRDWE 1393

Query: 2559 EKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVD 2380
             KFG+GLG+ VVELTGETA DLK LE+G +IISTPEKWDALSRRWKQRKHVQQVSLFI+D
Sbjct: 1394 RKFGRGLGMRVVELTGETATDLKLLERGQVIISTPEKWDALSRRWKQRKHVQQVSLFIID 1453

Query: 2379 ELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF 2200
            ELHLIGGQ GPVLE+IVSRMR IAS   + IRIVALS SLANAKDLGEWIGATSHGLFNF
Sbjct: 1454 ELHLIGGQGGPVLEVIVSRMRYIASQGENKIRIVALSTSLANAKDLGEWIGATSHGLFNF 1513

Query: 2199 PPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTA 2020
            PPGVRPVPLEIHIQGVDI NFE RMQAM KPTYTAIVQHAKN KPA+VFVPTRKH RLTA
Sbjct: 1514 PPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNRKPAIVFVPTRKHVRLTA 1573

Query: 2019 VDLCTYSTSD-TDKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDVV 1843
            VDL TYS++D  + P+F              I+++ L+ TL  GVGYLHEGL   DQ+VV
Sbjct: 1574 VDLTTYSSADGGENPTFLLRSPEELEPFVGKIQEEMLRATLRHGVGYLHEGLTGMDQEVV 1633

Query: 1842 LNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHAS 1663
              LF  G IQVCV SSS+CWG P+ AHLVVVMGTQYYDGRENAHTDYP+TDLLQMMGHAS
Sbjct: 1634 SQLFEAGWIQVCVMSSSLCWGVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHAS 1693

Query: 1662 RPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAV 1483
            RPL+DNSGKCVILCHAPRKEYYKKFLYEAFPVESHL H+LHD+LNAE+VVGV+ENKQDAV
Sbjct: 1694 RPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLQHYLHDNLNAEIVVGVIENKQDAV 1753

Query: 1482 DYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLKP 1303
            DYLTWTFMYRRLT+NPNYYNLQGVSHRHLSDHLS+ VEN LSDLE+SKCVAIE+DM L P
Sbjct: 1754 DYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSESVENTLSDLEASKCVAIEDDMDLSP 1813

Query: 1302 LNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLI 1123
            LNLG+IA         IERFSSSLT KTKMKGLL+ILASASEYA++PIRPGEE+LIR+LI
Sbjct: 1814 LNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEYAQIPIRPGEEDLIRRLI 1873

Query: 1122 NHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVISS 943
            NHQRFSFENPKCTDPH+KANALLQAHFSR  V GNLA DQREVLLSA RLLQAMVDVISS
Sbjct: 1874 NHQRFSFENPKCTDPHIKANALLQAHFSRQIVGGNLALDQREVLLSAGRLLQAMVDVISS 1933

Query: 942  NGWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXXX 763
            NGWL LAL  ME+SQMVTQGMWERD MLLQLPHFTK+LAKRCQENPG+SIETVF      
Sbjct: 1934 NGWLNLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKRCQENPGKSIETVFDLVEME 1993

Query: 762  XXXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQT 583
                   LQMSDSQL +IA+FCNRFPNID +YEVLDS+++R G+++TLQV LER+LEG+T
Sbjct: 1994 DDERRELLQMSDSQLLDIARFCNRFPNIDXTYEVLDSENLRAGDDITLQVMLERDLEGRT 2053

Query: 582  QSEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKKS 403
              EVG V APR+PK KEEGWWLVVGDT +NQLLAIKRV+LQR+SKVKL F+ P E G+KS
Sbjct: 2054 --EVGSVDAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVALQRKSKVKLEFAVPAEAGRKS 2111

Query: 402  YMIYFMCDSYLGCDQEYSFTIDVKE 328
            Y +YFMCDSYLGCDQEYSF++DV +
Sbjct: 2112 YTLYFMCDSYLGCDQEYSFSVDVMD 2136



 Score =  300 bits (768), Expect = 7e-78
 Identities = 236/853 (27%), Positives = 399/853 (46%), Gaps = 24/853 (2%)
 Frame = -1

Query: 2853 PPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKT 2674
            P  EL+ +  +P  A      +  +      N +Q++V+     T +NVL+ APTG+GKT
Sbjct: 455  PGEELVKISAMPDWA------QPAFKGMTQLNRVQSKVYETALFTAENVLLCAPTGAGKT 508

Query: 2673 ------ICGEFALLRNHQKGLE--NMRAVYIAPIEALAKERYREWKEKFGQGLGINVVEL 2518
                  I  + AL RN        N + VY+AP++AL  E       +  Q   + V EL
Sbjct: 509  NVAMLTILQQIALNRNADGSFNHSNYKIVYVAPMKALVAEVVGNLSNRL-QHYDVKVKEL 567

Query: 2517 TGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVDELHLIGGQIGPVLE 2338
            +G+ +   + +E+  II++TPEKWD ++R+   R + Q V L IVDE+HL+    GPVLE
Sbjct: 568  SGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLLHDNRGPVLE 627

Query: 2337 IIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHI 2161
             IV+R  R       +IR+V LSA+L N +D+  ++      GLF+F    RP PL    
Sbjct: 628  SIVARTVRQIETTKEHIRLVGLSATLPNYEDVALFLRVDLKKGLFHFDNSYRPCPLAQQY 687

Query: 2160 QGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTAVDLCTYSTSDTDK 1981
             G+ +     R Q M    Y  ++  A   +  L+FV +RK    TA  +   + ++   
Sbjct: 688  IGITVKKPLQRFQLMNDVCYEKVMAVAGKHQ-VLIFVHSRKETAKTARAIRDTALANDTL 746

Query: 1980 PSFXXXXXXXXXXXXS---AIKDDTLKRTLPLGVGYLHEGLNSYDQDVVLNLFVGGRIQV 1810
              F            S    +K++ LK  LP G    H G+   D+ +V  LF  G +QV
Sbjct: 747  GRFLKEDSASREILHSHTELVKNNDLKDLLPYGFAIHHAGMARADRQLVEELFADGHVQV 806

Query: 1809 CVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHASRPLVDNSGKCV 1630
             VS++++ WG  +PAH V++ GTQ Y+  + A T+    D++QM+G A RP  D+ G+ +
Sbjct: 807  LVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGI 866

Query: 1629 ILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAVDYLTWTFMYRR 1450
            I+      +YY   + +  P+ES     L D LNAE+V+G V+N ++A  ++ +T++Y R
Sbjct: 867  IITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACSWIGYTYLYVR 926

Query: 1449 LTKNPNYYNLQGVSHRHLS------DHLSDLVENALSDLESSKCVAIE-EDMYLKPLNLG 1291
            + +NP  Y   G+SH  L+      +  +DL+ +A   L+ +  V  + +  Y +  +LG
Sbjct: 927  MLRNPTLY---GLSHDALTRDITLEERRADLIHSAAIILDRNNLVKYDRKSGYFQVTDLG 983

Query: 1290 LIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLINHQR 1111
             IA         I  ++  L        L  + + + E+  + +R  E+  + KL++   
Sbjct: 984  RIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVP 1043

Query: 1110 FSFENPKCTDPHVKANALLQAHFSRHTVVG-NLAADQREVLLSAHRLLQAMVDVISSNGW 934
               +     +P  K N LLQA+ S+  + G +L +D   +  SA RL++A+ +++   GW
Sbjct: 1044 IPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLVRALFEIVLKRGW 1102

Query: 933  LGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXXXXXX 754
              L    + L +MV + MW     L Q      E+  +  E    + E  +         
Sbjct: 1103 AQLTEKALNLCKMVNKRMWSVQTPLRQFNAIPNEILMKL-EKKDLAWERYYDLSSQELGE 1161

Query: 753  XXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQTQSE 574
                 +M  +    + +F ++FP +D++  V      R    V L +T + + E +    
Sbjct: 1162 LIRYPKMGRT----LHKFIHQFPKLDLAAHV--QPITRTVLRVELTITPDFQWEDKVHGF 1215

Query: 573  VGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRR---SKVKLVFSAPT-EVGKK 406
            V             E +W++V D     +L  +   ++++       L F+ P  E    
Sbjct: 1216 V-------------EPFWVIVEDNDGEYILHHEYFMMKKQYIDEVHTLNFTVPIYEPLPP 1262

Query: 405  SYMIYFMCDSYLG 367
             Y I  + D +LG
Sbjct: 1263 QYFIRVVSDRWLG 1275


>ref|XP_012703060.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
            [Setaria italica] gi|835913601|ref|XP_012703061.1|
            PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa
            helicase [Setaria italica]
          Length = 2178

 Score = 2266 bits (5872), Expect = 0.0
 Identities = 1112/1349 (82%), Positives = 1218/1349 (90%), Gaps = 3/1349 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            LVE+LFAD H+QVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR
Sbjct: 833  LVEELFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 892

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQYD++GEGIILTGHSELQ+YLSLMNQQLPIESQFVS+LADQLNAEIVLGT+QNARE
Sbjct: 893  AGRPQYDTHGEGIILTGHSELQFYLSLMNQQLPIESQFVSQLADQLNAEIVLGTIQNARE 952

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            AC+W+GYTYLYIRMLRNP LYGLPADI + DKTL+ RRADLIHSAA++LD+NNL+KYDRK
Sbjct: 953  ACSWLGYTYLYIRMLRNPALYGLPADIFESDKTLDGRRADLIHSAANLLDRNNLIKYDRK 1012

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            +GYFQVTDLGRIASYYYI+HGTISTYNEYLKPT GDIEL RLFSLSEEFKYV VRQDEKM
Sbjct: 1013 TGYFQVTDLGRIASYYYISHGTISTYNEYLKPTMGDIELCRLFSLSEEFKYVGVRQDEKM 1072

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIPVKES+EEPSAKINVLLQAYIS+LKLEGLSL+SDMV+IRQSAGRLLRAL
Sbjct: 1073 ELAKLLDRVPIPVKESLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYIRQSAGRLLRAL 1132

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIVLKRGWAQLAEKALNLCKMVDK++WSVQTPLRQF GIP EILMKLEKK+L WERYYD
Sbjct: 1133 FEIVLKRGWAQLAEKALNLCKMVDKQMWSVQTPLRQFPGIPKEILMKLEKKELAWERYYD 1192

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQEIGELIRY KMGRQLHKCIHQLPK+NL+AHVQP TRTVLGFELTITPDFQWDDK+H
Sbjct: 1193 LSSQEIGELIRYPKMGRQLHKCIHQLPKLNLSAHVQPFTRTVLGFELTITPDFQWDDKIH 1252

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            GYVEPFWVIVEDNDGEYILHHEYF+LKKQY++EDHTLNFTVPIYEPLPPQYFIRVVSD+W
Sbjct: 1253 GYVEPFWVIVEDNDGEYILHHEYFLLKKQYVDEDHTLNFTVPIYEPLPPQYFIRVVSDKW 1312

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQT+LPVCFRHLILPEKY PPTELLDLQPLPV+ALRN +YE LY SFKHFNPIQTQVF
Sbjct: 1313 LGSQTILPVCFRHLILPEKYAPPTELLDLQPLPVSALRNARYEGLYSSFKHFNPIQTQVF 1372

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQK---GLENMRAVYIAPIEALAKERYRE 2566
            TVLYN+DD+VLVAAPTGSGKTIC EFA+LRNHQ+   G  NMR VYIAPIEALAKERYR+
Sbjct: 1373 TVLYNSDDSVLVAAPTGSGKTICAEFAILRNHQRAVSGESNMRVVYIAPIEALAKERYRD 1432

Query: 2565 WKEKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFI 2386
            W+ KFG+     VVELTGETAADLK L+KG IIISTPEKWDALSRRWKQRKH+QQVSLFI
Sbjct: 1433 WERKFGE--FAKVVELTGETAADLKLLDKGEIIISTPEKWDALSRRWKQRKHIQQVSLFI 1490

Query: 2385 VDELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLF 2206
            VDELHL+G   G VLE+IVSRMRRI+SHIGSNIRIVALSASLANAKDLGEWIGATSHGLF
Sbjct: 1491 VDELHLLGSDKGHVLEVIVSRMRRISSHIGSNIRIVALSASLANAKDLGEWIGATSHGLF 1550

Query: 2205 NFPPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARL 2026
            NFPP VRPVPLEIHIQGVDI NFE RMQAM KPTYTAI QHAK+GKPALV+VPTRKHARL
Sbjct: 1551 NFPPAVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAITQHAKSGKPALVYVPTRKHARL 1610

Query: 2025 TAVDLCTYSTSDTDKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDV 1846
            TA+DLC YS+ +     F            S ++++TLK TL  GVGYLHEGL+  DQ++
Sbjct: 1611 TALDLCAYSSVEGGGTPFLLGSEEEMDTFTSGVEEETLKNTLKCGVGYLHEGLSELDQEL 1670

Query: 1845 VLNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHA 1666
            V  LF+GGRIQVCV+SS+MCWG+P+PAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHA
Sbjct: 1671 VTQLFLGGRIQVCVASSTMCWGRPLPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHA 1730

Query: 1665 SRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDA 1486
            SRPL DNSGKCVILCHAPRKEYYKKFL+EAFPVES+LHHFLHDH+NAEVVVGVVENKQDA
Sbjct: 1731 SRPLQDNSGKCVILCHAPRKEYYKKFLFEAFPVESNLHHFLHDHMNAEVVVGVVENKQDA 1790

Query: 1485 VDYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLK 1306
            VDYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLS+L+E  L+DLESSKCVAIEEDMYLK
Sbjct: 1791 VDYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSELIETILNDLESSKCVAIEEDMYLK 1850

Query: 1305 PLNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKL 1126
            PLNLGLIA         IERFSS LTQKTKMKGLL+ILASASEYAELP RPGEE+ I +L
Sbjct: 1851 PLNLGLIASYYYISYTTIERFSSMLTQKTKMKGLLEILASASEYAELPGRPGEEDFIERL 1910

Query: 1125 INHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVIS 946
            + HQRFS E PK  DPHVKANALLQAHFSRH VVGNLAADQRE+LLSAHRLLQAMVDVIS
Sbjct: 1911 VRHQRFSIEKPKYGDPHVKANALLQAHFSRHNVVGNLAADQREILLSAHRLLQAMVDVIS 1970

Query: 945  SNGWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXX 766
            SNGWL LAL+TMELSQMVTQGMW+RD +LLQ+PHFTK+LA+RCQEN G+ IE++F     
Sbjct: 1971 SNGWLSLALNTMELSQMVTQGMWDRDSVLLQVPHFTKDLARRCQENEGKPIESIFDLAEM 2030

Query: 765  XXXXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQ 586
                    LQ+S+SQL +I +F  RFPN+DM+YEV + DDI  G+NVT+QVTLER++   
Sbjct: 2031 GIDEMRDLLQLSNSQLQDIIEFFKRFPNVDMAYEVREGDDISAGDNVTVQVTLERDMT-N 2089

Query: 585  TQSEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKK 406
              SEVG V+APRFPK KEEGWWLV+GD+ TNQLLAIKRV+LQ+R++VKL FSAP E G+K
Sbjct: 2090 LPSEVGPVHAPRFPKPKEEGWWLVIGDSSTNQLLAIKRVALQKRARVKLEFSAPAEAGRK 2149

Query: 405  SYMIYFMCDSYLGCDQEYSFTIDVKEGGE 319
             YMIY M DSYLGCDQEY FT+DVK+ G+
Sbjct: 2150 DYMIYLMSDSYLGCDQEYEFTVDVKDAGD 2178



 Score =  301 bits (772), Expect = 2e-78
 Identities = 206/698 (29%), Positives = 345/698 (49%), Gaps = 15/698 (2%)
 Frame = -1

Query: 2859 YPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSG 2680
            Y    +++ +  LP  A   P +E +       N +Q++V+       DN+L+ APTG+G
Sbjct: 494  YETGEKIVKISDLPEWA--QPAFEGMSA----LNRVQSRVYDTALFKPDNILLCAPTGAG 547

Query: 2679 KTICGEFALLRN---HQKGLE----NMRAVYIAPIEALAKERYREWKEKFGQGLGINVVE 2521
            KT      +L+    H K  E      + VY+AP++AL  E      ++      + V E
Sbjct: 548  KTNVAVLTILQQIGLHMKDGEFDNTKYKIVYVAPMKALVAEVVGNLSKRLAP-FNVTVRE 606

Query: 2520 LTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVDELHLIGGQIGPVL 2341
            L+G+     + +++  II++TPEKWD ++R+   R + Q V L I+DE+HL+    GPVL
Sbjct: 607  LSGDQNLTKQQIDETQIIVTTPEKWDIVTRKSGDRTYTQMVKLLIIDEIHLLHDNRGPVL 666

Query: 2340 EIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHI 2161
            E IV+R  R       +IR+V LSA+L N +D+  ++      +F+F    RP PL    
Sbjct: 667  ESIVARTVRQIETTKEHIRLVGLSATLPNYEDVALFLRVPKKSIFHFDNSYRPCPLAQQY 726

Query: 2160 QGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTAVDLC-TYSTSDTD 1984
             G+ +     R Q M +  Y  ++  A   +  L+FV +RK    TA  +  T   +DT 
Sbjct: 727  IGITVRKPLQRFQLMNEICYEKVMAAAGKHQ-VLIFVHSRKETAKTAKAIRDTALANDTV 785

Query: 1983 KPSFXXXXXXXXXXXXSA--IKDDTLKRTLPLGVGYLHEGLNSYDQDVVLNLFVGGRIQV 1810
                             A  +K++ LK  LP G    H G+   D+++V  LF    IQV
Sbjct: 786  SRFLKNESASQEILGTHAELVKNNDLKDLLPYGFAIHHAGMARVDRELVEELFADKHIQV 845

Query: 1809 CVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHASRPLVDNSGKCV 1630
             VS++++ WG  +PAH V++ GTQ Y+  + A T+    D++QM+G A RP  D  G+ +
Sbjct: 846  LVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTHGEGI 905

Query: 1629 ILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAVDYLTWTFMYRR 1450
            IL      ++Y   + +  P+ES     L D LNAE+V+G ++N ++A  +L +T++Y R
Sbjct: 906  ILTGHSELQFYLSLMNQQLPIESQFVSQLADQLNAEIVLGTIQNAREACSWLGYTYLYIR 965

Query: 1449 LTKNPNYYNLQG---VSHRHLSDHLSDLVENALSDLESSKCVAIEEDM-YLKPLNLGLIA 1282
            + +NP  Y L      S + L    +DL+ +A + L+ +  +  +    Y +  +LG IA
Sbjct: 966  MLRNPALYGLPADIFESDKTLDGRRADLIHSAANLLDRNNLIKYDRKTGYFQVTDLGRIA 1025

Query: 1281 XXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLINHQRFSF 1102
                     I  ++  L        L  + + + E+  + +R  E+  + KL++      
Sbjct: 1026 SYYYISHGTISTYNEYLKPTMGDIELCRLFSLSEEFKYVGVRQDEKMELAKLLDRVPIPV 1085

Query: 1101 ENPKCTDPHVKANALLQAHFSRHTVVG-NLAADQREVLLSAHRLLQAMVDVISSNGWLGL 925
            +     +P  K N LLQA+ SR  + G +L++D   +  SA RLL+A+ +++   GW  L
Sbjct: 1086 KE-SLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYIRQSAGRLLRALFEIVLKRGWAQL 1144

Query: 924  ALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQE 811
            A   + L +MV + MW     L Q P   KE+  + ++
Sbjct: 1145 AEKALNLCKMVDKQMWSVQTPLRQFPGIPKEILMKLEK 1182


>gb|EAY84119.1| hypothetical protein OsI_05501 [Oryza sativa Indica Group]
          Length = 2177

 Score = 2266 bits (5872), Expect = 0.0
 Identities = 1113/1348 (82%), Positives = 1217/1348 (90%), Gaps = 3/1348 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            LVE+LFAD H+QVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR
Sbjct: 831  LVEELFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 890

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQYD++GEGIILTGHSELQYYLSLMNQQLPIESQF+S+LADQLNAEIVLGT+QNARE
Sbjct: 891  AGRPQYDTHGEGIILTGHSELQYYLSLMNQQLPIESQFISRLADQLNAEIVLGTIQNARE 950

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            AC+W+GYTYLYIRMLRNPTLYGLPADI++ DKTL+ERRADL+HSAA++LD+NNL+KYDRK
Sbjct: 951  ACSWLGYTYLYIRMLRNPTLYGLPADIMETDKTLDERRADLVHSAANLLDRNNLIKYDRK 1010

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            +GYFQVTDLGRIASYYYI+HGTISTYNEYLKPT GDIEL RLFSLSEEFKYVSVRQDEKM
Sbjct: 1011 TGYFQVTDLGRIASYYYISHGTISTYNEYLKPTMGDIELCRLFSLSEEFKYVSVRQDEKM 1070

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIPVKES+EEPSAKINVLLQAYIS+LKLEGLSL+SDMV+IRQSAGRLLRAL
Sbjct: 1071 ELAKLLDRVPIPVKESLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYIRQSAGRLLRAL 1130

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIVLKRGWAQLAEKALNLCKM+DK++W+VQTPLRQF GIP EILMKLEKK+L WERYYD
Sbjct: 1131 FEIVLKRGWAQLAEKALNLCKMIDKQMWNVQTPLRQFPGIPKEILMKLEKKELAWERYYD 1190

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQEIGELIR+ KMGRQLHKCIHQLPK+NL+AHVQPITRTVLGFELTITPDFQWDDKVH
Sbjct: 1191 LSSQEIGELIRFPKMGRQLHKCIHQLPKLNLSAHVQPITRTVLGFELTITPDFQWDDKVH 1250

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            GYVEPFWVIVEDNDGE ILHHEYF++KKQY++EDHTLNFTVPIYEPLPPQYFIRVVSD+W
Sbjct: 1251 GYVEPFWVIVEDNDGENILHHEYFMVKKQYVDEDHTLNFTVPIYEPLPPQYFIRVVSDKW 1310

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQT+LPVCFRHLILPEKY PPTELLDLQPLPVTALRN +YE LY +FKHFNPIQTQVF
Sbjct: 1311 LGSQTILPVCFRHLILPEKYAPPTELLDLQPLPVTALRNARYEGLYSAFKHFNPIQTQVF 1370

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQK---GLENMRAVYIAPIEALAKERYRE 2566
            TVLYNTDD+VLVAAPTGSGKTIC EFA+LRNHQK   G  NMR VYIAPIEALAKERYR+
Sbjct: 1371 TVLYNTDDSVLVAAPTGSGKTICAEFAILRNHQKAVSGESNMRVVYIAPIEALAKERYRD 1430

Query: 2565 WKEKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFI 2386
            W++KFG+     VVELTGETAADLK L+KG IIISTPEKWDALSRRWKQRK VQQVSLFI
Sbjct: 1431 WEQKFGE--FARVVELTGETAADLKLLDKGEIIISTPEKWDALSRRWKQRKQVQQVSLFI 1488

Query: 2385 VDELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLF 2206
            VDELHLIG + G VLE+IVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLF
Sbjct: 1489 VDELHLIGSEKGHVLEVIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLF 1548

Query: 2205 NFPPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARL 2026
            NFPP VRPVPLEIHIQGVDI NFE RMQAM KPTYTAI QHAKNGKPALVFVPTRKHARL
Sbjct: 1549 NFPPAVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAITQHAKNGKPALVFVPTRKHARL 1608

Query: 2025 TAVDLCTYSTSDTDKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDV 1846
            TA+DLC YS+++     F              I D+TLK TL  GVGYLHEGL+  +Q+V
Sbjct: 1609 TALDLCAYSSAEGGGTPFLLGSEDEMDAFTGGISDETLKYTLKCGVGYLHEGLSDLEQEV 1668

Query: 1845 VLNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHA 1666
            V  LF+ GRIQVCV+SS++CWG+ +PAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHA
Sbjct: 1669 VTQLFLSGRIQVCVASSTVCWGRSLPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHA 1728

Query: 1665 SRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDA 1486
            SRPL DNSGKCVILCHAPRKEYYKKFL+EAFPVESHLHHFLHDH+NAEVVVGV+ENKQDA
Sbjct: 1729 SRPLQDNSGKCVILCHAPRKEYYKKFLFEAFPVESHLHHFLHDHMNAEVVVGVIENKQDA 1788

Query: 1485 VDYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLK 1306
            VDYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLS+LVE  L+DLESSKCVAIEEDMYLK
Sbjct: 1789 VDYLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSELVETVLNDLESSKCVAIEEDMYLK 1848

Query: 1305 PLNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKL 1126
            PLNLGLIA         IERFSS LTQKTKMKGLL+ILASASEYAELP RPGEE+ I KL
Sbjct: 1849 PLNLGLIASYYYISYTTIERFSSMLTQKTKMKGLLEILASASEYAELPSRPGEEDFIEKL 1908

Query: 1125 INHQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVIS 946
            + HQRFS E P+  DPHVKANALLQAHFSRHT++GNLAADQRE+LLSAHRLLQAMVDVIS
Sbjct: 1909 VRHQRFSIEKPRYGDPHVKANALLQAHFSRHTILGNLAADQREILLSAHRLLQAMVDVIS 1968

Query: 945  SNGWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXX 766
            SNGWL LAL+ MELSQMVTQGMW+RD +LLQLPHFTKELA+RCQEN GR IE++F     
Sbjct: 1969 SNGWLTLALNAMELSQMVTQGMWDRDSVLLQLPHFTKELARRCQENEGRPIESIFDLAEM 2028

Query: 765  XXXXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQ 586
                    LQ S+ QL +I +F  RFPN+DM+YEV + DDIR G+NVT+QVTLER++   
Sbjct: 2029 SIDEMRDLLQQSNPQLQDIIEFFKRFPNVDMAYEVREGDDIRAGDNVTVQVTLERDMT-N 2087

Query: 585  TQSEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKK 406
              SEVG V+APR+PK KEEGWWLV+GD+ TNQLLAIKRV+LQ+R++VKL F+A +E G+K
Sbjct: 2088 LPSEVGPVHAPRYPKPKEEGWWLVIGDSSTNQLLAIKRVALQKRARVKLEFTAASEAGRK 2147

Query: 405  SYMIYFMCDSYLGCDQEYSFTIDVKEGG 322
             YMIY M DSYLGCDQEY FT+DV + G
Sbjct: 2148 EYMIYLMSDSYLGCDQEYEFTVDVMDAG 2175



 Score =  310 bits (795), Expect = 5e-81
 Identities = 207/672 (30%), Positives = 336/672 (50%), Gaps = 15/672 (2%)
 Frame = -1

Query: 2781 YGSFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICGEFALLRN---HQKG--LENMR 2617
            +      N +Q++V+       DN+L+ APTG+GKT      +L+    H K    +N +
Sbjct: 512  FAKMTQLNRVQSKVYETALFKPDNILLCAPTGAGKTNVAVLTILQQIGLHMKDGVFDNTK 571

Query: 2616 --AVYIAPIEALAKERYREWKEKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWD 2443
               VY+AP++AL  E       +     GI V EL+G+     + +++  II++TPEKWD
Sbjct: 572  YKIVYVAPMKALVAEVVGNLSARLS-AYGITVRELSGDQNLTKQQIDETQIIVTTPEKWD 630

Query: 2442 ALSRRWKQRKHVQQVSLFIVDELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSAS 2263
             ++R+   R + Q V L I+DE+HL+    GPVLE IVSR  R       +IR+V LSA+
Sbjct: 631  IVTRKSGDRTYTQMVKLLIIDEIHLLHDNRGPVLESIVSRTVRQIETTKEHIRLVGLSAT 690

Query: 2262 LANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQH 2083
            L N +D+  ++   S GLF+F    RP PL     G+ +     R Q M +  Y  ++  
Sbjct: 691  LPNYEDVAVFLRVRSDGLFHFDNSYRPCPLAQQYIGITVRKPLQRFQLMNEICYEKVMAS 750

Query: 2082 AKNGKPALVFVPTRKHARLTAVDLC-TYSTSDTDKPSFXXXXXXXXXXXXSA--IKDDTL 1912
            A   +  L+FV +RK    TA  +  T   +DT                  A  +K   L
Sbjct: 751  AGKHQ-VLIFVHSRKETAKTARAIRDTALANDTLNRFLKDDSASQEILGSQAELVKSSDL 809

Query: 1911 KRTLPLGVGYLHEGLNSYDQDVVLNLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYY 1732
            K  LP G    H GL   D+++V  LF    IQV VS++++ WG  +PAH V++ GTQ Y
Sbjct: 810  KDLLPYGFAIHHAGLARVDRELVEELFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQIY 869

Query: 1731 DGRENAHTDYPITDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLH 1552
            +  + A T+    D++QM+G A RP  D  G+ +IL      +YY   + +  P+ES   
Sbjct: 870  NPEKGAWTELSPLDVMQMLGRAGRPQYDTHGEGIILTGHSELQYYLSLMNQQLPIESQFI 929

Query: 1551 HFLHDHLNAEVVVGVVENKQDAVDYLTWTFMYRRLTKNPNYYNLQG---VSHRHLSDHLS 1381
              L D LNAE+V+G ++N ++A  +L +T++Y R+ +NP  Y L      + + L +  +
Sbjct: 930  SRLADQLNAEIVLGTIQNAREACSWLGYTYLYIRMLRNPTLYGLPADIMETDKTLDERRA 989

Query: 1380 DLVENALSDLESSKCVAIEEDM-YLKPLNLGLIAXXXXXXXXXIERFSSSLTQKTKMKGL 1204
            DLV +A + L+ +  +  +    Y +  +LG IA         I  ++  L        L
Sbjct: 990  DLVHSAANLLDRNNLIKYDRKTGYFQVTDLGRIASYYYISHGTISTYNEYLKPTMGDIEL 1049

Query: 1203 LDILASASEYAELPIRPGEEELIRKLINHQRFSFENPKCTDPHVKANALLQAHFSRHTVV 1024
              + + + E+  + +R  E+  + KL++      +     +P  K N LLQA+ SR  + 
Sbjct: 1050 CRLFSLSEEFKYVSVRQDEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQAYISRLKLE 1108

Query: 1023 G-NLAADQREVLLSAHRLLQAMVDVISSNGWLGLALSTMELSQMVTQGMWERDPMLLQLP 847
            G +L++D   +  SA RLL+A+ +++   GW  LA   + L +M+ + MW     L Q P
Sbjct: 1109 GLSLSSDMVYIRQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMIDKQMWNVQTPLRQFP 1168

Query: 846  HFTKELAKRCQE 811
               KE+  + ++
Sbjct: 1169 GIPKEILMKLEK 1180


>gb|AES66243.2| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
            truncatula]
          Length = 2188

 Score = 2261 bits (5860), Expect = 0.0
 Identities = 1115/1349 (82%), Positives = 1212/1349 (89%), Gaps = 1/1349 (0%)
 Frame = -1

Query: 4356 LVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 4177
            LVEDLFADGH QVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR
Sbjct: 840  LVEDLFADGHAQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGR 899

Query: 4176 AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 3997
            AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQF+SKLADQLNAEIVLGTVQNA+E
Sbjct: 900  AGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAKE 959

Query: 3996 ACTWIGYTYLYIRMLRNPTLYGLPADILDRDKTLEERRADLIHSAASILDKNNLVKYDRK 3817
            AC WIGYTYLY+RMLRNP+LYGL  D+L RD TLEERRADLIH+AA+ILD+NNLVKYDRK
Sbjct: 960  ACHWIGYTYLYVRMLRNPSLYGLAPDVLSRDITLEERRADLIHTAATILDRNNLVKYDRK 1019

Query: 3816 SGYFQVTDLGRIASYYYITHGTISTYNEYLKPTTGDIELFRLFSLSEEFKYVSVRQDEKM 3637
            SGYFQVTDLGRIASYYYITHGTISTYNE+LKPT GDIEL RLFSLSEEFKYV+VRQDEKM
Sbjct: 1020 SGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKM 1079

Query: 3636 ELAKLLERVPIPVKESVEEPSAKINVLLQAYISQLKLEGLSLTSDMVFIRQSAGRLLRAL 3457
            ELAKLL+RVPIP+KES+EEPSAKINVLLQAYISQLKLEGLS+TSDMVFI QSAGRLLRAL
Sbjct: 1080 ELAKLLDRVPIPIKESLEEPSAKINVLLQAYISQLKLEGLSMTSDMVFITQSAGRLLRAL 1139

Query: 3456 FEIVLKRGWAQLAEKALNLCKMVDKRIWSVQTPLRQFHGIPNEILMKLEKKDLVWERYYD 3277
            FEIVLKRGWAQLAEKALNLCKMV KR+WSVQTPLRQF+GIP+++L KLEKKDL WERYYD
Sbjct: 1140 FEIVLKRGWAQLAEKALNLCKMVTKRMWSVQTPLRQFNGIPSDVLTKLEKKDLAWERYYD 1199

Query: 3276 LSSQEIGELIRYQKMGRQLHKCIHQLPKVNLAAHVQPITRTVLGFELTITPDFQWDDKVH 3097
            LSSQEIGELIR  KMGR LH+ IHQ PK+NLAAHVQPITRTVLG ELTITPDF WDD++H
Sbjct: 1200 LSSQEIGELIRAPKMGRTLHRFIHQFPKLNLAAHVQPITRTVLGVELTITPDFAWDDRMH 1259

Query: 3096 GYVEPFWVIVEDNDGEYILHHEYFILKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDRW 2917
            GYVEPFWVIVEDNDGEYILHHEYF+LKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSD+W
Sbjct: 1260 GYVEPFWVIVEDNDGEYILHHEYFLLKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDKW 1319

Query: 2916 LGSQTVLPVCFRHLILPEKYPPPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVF 2737
            LGSQTVLPV FRHLILPEKYPPPTELLDLQPLPVTALRNP YE LY  FKHFNP+QTQVF
Sbjct: 1320 LGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVF 1379

Query: 2736 TVLYNTDDNVLVAAPTGSGKTICGEFALLRNHQKGLEN-MRAVYIAPIEALAKERYREWK 2560
            TVLYN+DDNVLVAAPTGSGKTIC EFA+LRNHQK  ++ MR VYIAP+EALAKERYR+W+
Sbjct: 1380 TVLYNSDDNVLVAAPTGSGKTICAEFAILRNHQKLPDSVMRVVYIAPVEALAKERYRDWE 1439

Query: 2559 EKFGQGLGINVVELTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVD 2380
            +KFG GL + VVELTGETA DLK LEKG +IISTPEKWDALSRRWKQRKHVQQVSLFI+D
Sbjct: 1440 KKFGGGLKLKVVELTGETATDLKLLEKGQVIISTPEKWDALSRRWKQRKHVQQVSLFIID 1499

Query: 2379 ELHLIGGQIGPVLEIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGATSHGLFNF 2200
            ELHLIGGQ GPVLE+IVSRMR I+S + + IRIVALS SLANAKDLGEWIGATSHGLFNF
Sbjct: 1500 ELHLIGGQGGPVLEVIVSRMRYISSQLENKIRIVALSTSLANAKDLGEWIGATSHGLFNF 1559

Query: 2199 PPGVRPVPLEIHIQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTA 2020
            PPGVRPVPLEIHIQGVDI NFE RMQAM KPTYT+I QHAKN KPA+VFVPTRKH RLTA
Sbjct: 1560 PPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTSIAQHAKNKKPAIVFVPTRKHVRLTA 1619

Query: 2019 VDLCTYSTSDTDKPSFXXXXXXXXXXXXSAIKDDTLKRTLPLGVGYLHEGLNSYDQDVVL 1840
            VDL TYS +D+ +  F            + I D+ LK TL  GVGYLHEGLNS D D+V 
Sbjct: 1620 VDLITYSGADSGEKPFLLRSLEELEPFINKISDEMLKVTLREGVGYLHEGLNSLDHDIVA 1679

Query: 1839 NLFVGGRIQVCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHASR 1660
             LF  G IQVCV SSSMCWG  + AHLVVVMGTQYYDGRENA TDYP+TDLLQMMGHASR
Sbjct: 1680 QLFEAGWIQVCVLSSSMCWGVTLSAHLVVVMGTQYYDGRENAQTDYPVTDLLQMMGHASR 1739

Query: 1659 PLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAVD 1480
            PLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHD+LNAE+V G++ENKQDAVD
Sbjct: 1740 PLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNLNAEIVAGIIENKQDAVD 1799

Query: 1479 YLTWTFMYRRLTKNPNYYNLQGVSHRHLSDHLSDLVENALSDLESSKCVAIEEDMYLKPL 1300
            YLTWTFMYRRLT+NPNYYNLQGVSHRHLSDHLS++VEN LSDLE+SKCV+IE+DM L PL
Sbjct: 1800 YLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSEMVENTLSDLEASKCVSIEDDMDLSPL 1859

Query: 1299 NLGLIAXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLIN 1120
            NLG+IA         IERFSSSLT KTKMKGLL++L+SASEYA LPIRPGEEE++R+LIN
Sbjct: 1860 NLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEVLSSASEYAHLPIRPGEEEVVRRLIN 1919

Query: 1119 HQRFSFENPKCTDPHVKANALLQAHFSRHTVVGNLAADQREVLLSAHRLLQAMVDVISSN 940
            HQRFSFENPK TDPHVKANALLQAHFSR +V GNL+ DQREVLLSA+RLLQAMVDVISSN
Sbjct: 1920 HQRFSFENPKVTDPHVKANALLQAHFSRQSVGGNLSLDQREVLLSANRLLQAMVDVISSN 1979

Query: 939  GWLGLALSTMELSQMVTQGMWERDPMLLQLPHFTKELAKRCQENPGRSIETVFXXXXXXX 760
            GWL +AL  ME+SQMVTQGMWERD MLLQLPHFTK+LAK+CQENPGRSIETVF       
Sbjct: 1980 GWLSMALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKKCQENPGRSIETVFDLLEMED 2039

Query: 759  XXXXXXLQMSDSQLSEIAQFCNRFPNIDMSYEVLDSDDIRLGENVTLQVTLERELEGQTQ 580
                  L M+DSQL +IA+FCNRFPNID+SYE+LD+D++R G+++TLQVTLER+LEG+T 
Sbjct: 2040 DERRELLNMTDSQLLDIARFCNRFPNIDLSYEILDNDNVRAGDDITLQVTLERDLEGKT- 2098

Query: 579  SEVGRVYAPRFPKQKEEGWWLVVGDTGTNQLLAIKRVSLQRRSKVKLVFSAPTEVGKKSY 400
             EVG V APR+PK KEEGWWLVVGDT TN LLAIKRVSLQR+ K KL F+AP + GKKSY
Sbjct: 2099 -EVGPVDAPRYPKAKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSY 2157

Query: 399  MIYFMCDSYLGCDQEYSFTIDVKEGGEGD 313
            ++YFMCDSY+GCDQEY FT+DVKE   G+
Sbjct: 2158 VLYFMCDSYMGCDQEYGFTLDVKEADGGE 2186



 Score =  297 bits (760), Expect = 6e-77
 Identities = 210/685 (30%), Positives = 339/685 (49%), Gaps = 18/685 (2%)
 Frame = -1

Query: 2853 PPTELLDLQPLPVTALRNPKYEDLYGSFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKT 2674
            P  +LL +  +P  A      +  +      N +Q++V+       DN+L+ APTG+GKT
Sbjct: 500  PNEKLLKISAMPDWA------QPAFKGMTQLNRVQSKVYETALFKPDNLLLCAPTGAGKT 553

Query: 2673 ------ICGEFALLRNHQKGLENMRA---VYIAPIEALAKERYREWKEKFGQGLGINVVE 2521
                  I  + A  RN   G  +  A   VY+AP++AL  E       +  Q   + V E
Sbjct: 554  NVAVLTILQQIARHRNTDDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRL-QDYNVTVRE 612

Query: 2520 LTGETAADLKSLEKGNIIISTPEKWDALSRRWKQRKHVQQVSLFIVDELHLIGGQIGPVL 2341
            L+G+ +   + +E+  II++TPEKWD ++R+   R + Q V L I+DE+HL+    GPVL
Sbjct: 613  LSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLVIIDEIHLLHDNRGPVL 672

Query: 2340 EIIVSRMRRIASHIGSNIRIVALSASLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIH 2164
            E IV+R  R        IR+V LSA+L N +D+  ++    + GLF F    RPVPL   
Sbjct: 673  ESIVARTVRQIETSKDYIRLVGLSATLPNYEDVALFLRVDLNKGLFYFDNSYRPVPLSQQ 732

Query: 2163 IQGVDIVNFEGRMQAMAKPTYTAIVQHAKNGKPALVFVPTRKHARLTAVDLCTYSTSDTD 1984
              G+ I     R Q M    Y  ++  A   +  L+FV +RK    TA  +   + +D  
Sbjct: 733  YIGITIKKPLQRFQLMNDICYRKVLDVAGKHQ-VLIFVHSRKETAKTARAIRDAALADDT 791

Query: 1983 KPSFXXXXXXXXXXXXS---AIKDDTLKRTLPLGVGYLHEGLNSYDQDVVLNLFVGGRIQ 1813
               F            +    +K   LK  LP G    H G+   D+ +V +LF  G  Q
Sbjct: 792  LGRFLKEDSASREILHTHTDLVKSSDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHAQ 851

Query: 1812 VCVSSSSMCWGKPMPAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHASRPLVDNSGKC 1633
            V VS++++ WG  +PAH V++ GTQ Y+  + A T+    D++QM+G A RP  D+ G+ 
Sbjct: 852  VLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEG 911

Query: 1632 VILCHAPRKEYYKKFLYEAFPVESHLHHFLHDHLNAEVVVGVVENKQDAVDYLTWTFMYR 1453
            +IL      +YY   + +  P+ES     L D LNAE+V+G V+N ++A  ++ +T++Y 
Sbjct: 912  IILTGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAKEACHWIGYTYLYV 971

Query: 1452 RLTKNPNYYNL-QGVSHRH--LSDHLSDLVENALSDLESSKCVAIE-EDMYLKPLNLGLI 1285
            R+ +NP+ Y L   V  R   L +  +DL+  A + L+ +  V  + +  Y +  +LG I
Sbjct: 972  RMLRNPSLYGLAPDVLSRDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRI 1031

Query: 1284 AXXXXXXXXXIERFSSSLTQKTKMKGLLDILASASEYAELPIRPGEEELIRKLINHQRFS 1105
            A         I  ++  L        L  + + + E+  + +R  E+  + KL++     
Sbjct: 1032 ASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIP 1091

Query: 1104 FENPKCTDPHVKANALLQAHFSRHTVVG-NLAADQREVLLSAHRLLQAMVDVISSNGWLG 928
             +     +P  K N LLQA+ S+  + G ++ +D   +  SA RLL+A+ +++   GW  
Sbjct: 1092 IKE-SLEEPSAKINVLLQAYISQLKLEGLSMTSDMVFITQSAGRLLRALFEIVLKRGWAQ 1150

Query: 927  LALSTMELSQMVTQGMWERDPMLLQ 853
            LA   + L +MVT+ MW     L Q
Sbjct: 1151 LAEKALNLCKMVTKRMWSVQTPLRQ 1175