BLASTX nr result
ID: Anemarrhena21_contig00002106
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00002106
(4023 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010921974.1| PREDICTED: probable RNA-dependent RNA polyme... 1630 0.0
ref|XP_008778879.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 1618 0.0
ref|XP_009389500.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 1570 0.0
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu... 1520 0.0
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu... 1517 0.0
ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1511 0.0
ref|XP_011026450.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1510 0.0
ref|XP_010254390.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1500 0.0
ref|XP_012071453.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1494 0.0
ref|XP_008219491.1| PREDICTED: RNA-dependent RNA polymerase 6 [P... 1491 0.0
ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prun... 1484 0.0
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V... 1482 0.0
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici... 1476 0.0
ref|XP_012076580.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1472 0.0
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca... 1467 0.0
ref|XP_010048973.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1462 0.0
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 1461 0.0
gb|KDO61726.1| hypothetical protein CISIN_1g041430mg [Citrus sin... 1461 0.0
ref|XP_008394093.1| PREDICTED: RNA-dependent RNA polymerase 6 [M... 1457 0.0
ref|XP_009355733.1| PREDICTED: RNA-dependent RNA polymerase 6 [P... 1455 0.0
>ref|XP_010921974.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis
guineensis]
Length = 1198
Score = 1630 bits (4220), Expect = 0.0
Identities = 806/1210 (66%), Positives = 975/1210 (80%), Gaps = 2/1210 (0%)
Frame = -1
Query: 3963 MGSLGSS-RDRKATVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESY 3787
MGSLG+ RD+K V++QVSF GFD+R +A+ L +E + +IWRCR+K+S TP ESY
Sbjct: 1 MGSLGAQERDQKELVVSQVSFGGFDERVSAKDLTDFMEHEAG-LIWRCRVKNSWTPPESY 59
Query: 3786 PDFDI-DVADSSFPYLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLV 3610
P+F++ DV+D + + VVPHAFV F TP A+RA+++AG+CEL PL
Sbjct: 60 PNFNVLDVSDVL------RKDDHPKVVPHAFVHFATPDAAKRAINAAGKCELILNGHPLR 113
Query: 3609 AHCGIDSPYRVNXXXXXXXXXXXDVCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFD 3430
A+ GIDS +R+N DV EIG+L S EF+ AW+ PK G++FLIDPFD
Sbjct: 114 ANSGIDSSFRINRRRTTDPFRFVDVGVEIGTLASRDEFLVAWK-GPKL--GVDFLIDPFD 170
Query: 3429 NCCKLFFSRNVAFTVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSA 3250
CC++ FS+ AF K +E+ VIKCD K+EFL+RD+ E+++ D P V+LFQL S
Sbjct: 171 GCCRILFSKETAFAFKDIKEMAVIKCDFKVEFLVRDINEVKLFTDRYPHVMLFQLS--ST 228
Query: 3249 PLVSYRTADDDIHESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKA 3070
P V YRTADDDIH + S++LLDDEDPWIRTTDFTP GA+ R SSYR+S PR+ LEK+
Sbjct: 229 PWVYYRTADDDIHVTASFSLLDDEDPWIRTTDFTPGGAISRSSSYRVSFSPRYGRILEKS 288
Query: 3069 LHYMKERRIDGLRPERPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKGIF 2890
L Y++ERRI P+RP+ V++E G +PFF YKEG+SF+ MF+V+ALVHKGI
Sbjct: 289 LAYLRERRIAEHWPKRPLAVREEPEFGTLMPDPFFSVQYKEGISFSIMFLVDALVHKGIV 348
Query: 2889 IHHRLSDEFFGLLRGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKTPT 2710
H+LS+EFF LLR QS+ +N+ ALRHI+ YK PIFD RLKLVQ+WLL++ KL+K+
Sbjct: 349 NQHQLSEEFFALLRSQSDAVNEIALRHIWAYKTPIFDPRKRLKLVQDWLLKNPKLLKSSK 408
Query: 2709 PSEDNIEVRKLVITPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSNVL 2530
+D+ EVR+LVITPTKAYCLPPE+EL+NRVLR Y+ ++DRFLRVTFMDE QPLN+NVL
Sbjct: 409 LLDDSTEVRRLVITPTKAYCLPPEVELSNRVLRNYKKVADRFLRVTFMDEGMQPLNNNVL 468
Query: 2529 NFYVAPIVKEVAKNSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWFFA 2350
N+YVAPIVKE+ NSF QKT +FRRVRNI+ +GF+LC R+YSFLAFSSNQLR +SAWFFA
Sbjct: 469 NYYVAPIVKELTSNSFPQKTTVFRRVRNILLDGFHLCGRRYSFLAFSSNQLRDRSAWFFA 528
Query: 2349 EDKNISVYDITSWMGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNGYC 2170
ED N SV I +WMGKF KNVAK AARMGQCFSSTYATV+VP + NP LPDI RNGY
Sbjct: 529 EDSNTSVMAIRNWMGKFANKNVAKCAARMGQCFSSTYATVDVPLDQFNPLLPDIERNGYV 588
Query: 2169 FSDGIGKITPDLAMEVAKKLQLMENPPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKSMD 1990
FSDGIGKI P+LA+EVA+KLQL ENPPSAYQIRYAG KGVVAVWP +DDGVRLSLR SM+
Sbjct: 589 FSDGIGKIIPELAIEVAEKLQLTENPPSAYQIRYAGFKGVVAVWPADDDGVRLSLRPSMN 648
Query: 1989 KFHSMHRMLEIVSWTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDPDI 1810
KF S H MLE+VSWTRFQPGFLNRQIVTLLS+L+V D VF MQDSM++KL+Q LVD D+
Sbjct: 649 KFESSHTMLEVVSWTRFQPGFLNRQIVTLLSSLNVADSVFESMQDSMIYKLNQMLVDTDV 708
Query: 1809 AFEVLTTSCAEQGNVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKGRW 1630
AF+VLT+SCAEQGN AA+MLSAGFKPQ EPHLKAMLSCIR +QL DL +KARIFV KGRW
Sbjct: 709 AFDVLTSSCAEQGNTAAIMLSAGFKPQMEPHLKAMLSCIRSAQLGDLLAKARIFVPKGRW 768
Query: 1629 LMGCLDELGVLEQGQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCLHP 1450
LMGCLDELGVLE GQCFIQ+S PSLENCF+KHGSRFS K+N++VIVGTVA+AKNPCLHP
Sbjct: 769 LMGCLDELGVLEHGQCFIQSSIPSLENCFMKHGSRFSLLKKNRQVIVGTVAIAKNPCLHP 828
Query: 1449 GDIRILEAVDVPGLHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKRS 1270
GDIRILEAVDVP LHHLVDC VFPQKG+RPH+NEASGSDLDGDLYFVTWDENLIPPSK+S
Sbjct: 829 GDIRILEAVDVPSLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKKS 888
Query: 1269 WMPMAYTPAEAKNEPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEKCL 1090
W+PM YTPAE K +PR + +D++DFF+KN+ N+NLG+ICNAHVVHAD+SEYGA+DE CL
Sbjct: 889 WIPMDYTPAEPKLQPRAVTPRDIIDFFLKNMVNENLGVICNAHVVHADRSEYGALDENCL 948
Query: 1089 KLAELAATAVDFPKTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDASD 910
+LAELAATAVDFPKTGK+V+MP+ LKPKVYPDFM KD SYKS+K+LGRLYR IK A+D
Sbjct: 949 QLAELAATAVDFPKTGKLVTMPSGLKPKVYPDFMGKDDHMSYKSQKVLGRLYRNIKYAAD 1008
Query: 909 EDNSSELISAYEDLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEGEVVT 730
D S+EL E+LPYDT+L+I GA YL +AW+ KCSYD QLNALL Q+ V EGEVVT
Sbjct: 1009 NDVSTELPCTAEELPYDTDLDIPGASYYLADAWQNKCSYDGQLNALLAQYRVRSEGEVVT 1068
Query: 729 GHICSLGKHNSRKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYEMKAS 550
GHI SL K+NSRKQGE+KERL NAY AL+K++RR FE+M PDF +LTD+E+++ YE +AS
Sbjct: 1069 GHIWSLPKYNSRKQGELKERLKNAYSALHKEFRRIFEDMGPDFQQLTDDEKSVSYEQRAS 1128
Query: 549 AWYQVTYHPRWVKKSIETEEPDGEMVPPRLSFAWIPADYLVRIKVKHLEKGRVGSGKPID 370
AWYQVTYHPRW+K+S E +EPDG++VP RLSFAW+ ADYLVRIK+ ++ + + +PID
Sbjct: 1129 AWYQVTYHPRWIKRSGEIKEPDGDVVPARLSFAWVAADYLVRIKISSQDRQKFDNSRPID 1188
Query: 369 SLASYLYERI 340
+LA YL ERI
Sbjct: 1189 TLACYLSERI 1198
>ref|XP_008778879.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
SHL2 [Phoenix dactylifera]
Length = 1198
Score = 1618 bits (4189), Expect = 0.0
Identities = 806/1210 (66%), Positives = 969/1210 (80%), Gaps = 2/1210 (0%)
Frame = -1
Query: 3963 MGSLGSS-RDRKATVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESY 3787
MGSLG+ RD+K V++QVSF GFD+R +A+ L LE + +IWRCR+K+S TP ESY
Sbjct: 1 MGSLGADERDQKELVVSQVSFGGFDERVSAKDLTDFLEHEAG-LIWRCRVKNSWTPPESY 59
Query: 3786 PDFDI-DVADSSFPYLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLV 3610
PD+D+ DV+D ++ + VVPHAFV F T A+RA+++AG+CEL PL
Sbjct: 60 PDYDVLDVSDV------RRKDDYPKVVPHAFVHFATLDAAKRAINAAGKCELVLQGCPLR 113
Query: 3609 AHCGIDSPYRVNXXXXXXXXXXXDVCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFD 3430
A+ G DS +R++ DV EIG+L S EF+ AW+ PK SG++FLIDPFD
Sbjct: 114 ANSGTDSSFRISRRRTMDPFRFTDVGVEIGTLASRDEFLVAWK-GPK--SGVDFLIDPFD 170
Query: 3429 NCCKLFFSRNVAFTVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSA 3250
C++ FS+ AF K +E+ V+KCD K+EFL RD+ E+++ D P +LFQL S
Sbjct: 171 GRCRILFSKETAFAFKDIKEMAVLKCDFKVEFLARDINEVKLFTDQYPPAMLFQLA--ST 228
Query: 3249 PLVSYRTADDDIHESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKA 3070
P V YRTADDDI + ++LLDDEDPWIRTTDFTP GA+ RC SYRIS PR+ L+++
Sbjct: 229 PWVYYRTADDDILVTAPFSLLDDEDPWIRTTDFTPGGAISRCCSYRISFSPRYGRILKES 288
Query: 3069 LHYMKERRIDGLRPERPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKGIF 2890
L Y+KERRI RP+RP++V +E G +PFF +KEG+SF+ MF+V+ALVHKGI
Sbjct: 289 LAYLKERRIAEHRPKRPLVVLEEPDFGTLMPDPFFSVQHKEGISFSIMFLVDALVHKGIV 348
Query: 2889 IHHRLSDEFFGLLRGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKTPT 2710
H+LS+EFF LLR QS+ +N+ ALRHI+ YK PIFDA RLKLVQ+WLL++ K +K+
Sbjct: 349 NQHQLSEEFFALLRSQSDSMNETALRHIWAYKTPIFDACRRLKLVQDWLLKNPKFLKSSK 408
Query: 2709 PSEDNIEVRKLVITPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSNVL 2530
S+D+ EVR+LVITPTKAYCLPP +EL+NRVLR Y++++DRFLRVTFMDE Q LN+NVL
Sbjct: 409 LSDDSSEVRRLVITPTKAYCLPPGVELSNRVLRNYKEVADRFLRVTFMDEGMQKLNNNVL 468
Query: 2529 NFYVAPIVKEVAKNSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWFFA 2350
N+YVAPIVKE+ NSF QKT +FRRVR+I+ +GF+LC R+YSFLAFSSNQLR +SAWFFA
Sbjct: 469 NYYVAPIVKELTSNSFPQKTTVFRRVRSILIDGFHLCGRRYSFLAFSSNQLRDRSAWFFA 528
Query: 2349 EDKNISVYDITSWMGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNGYC 2170
ED N SV DI WMGKF KNVAK AARMGQCFSSTYATV+VP +VNP LPDI R GY
Sbjct: 529 EDSNTSVEDIRDWMGKFANKNVAKCAARMGQCFSSTYATVDVPPDQVNPLLPDIERKGYI 588
Query: 2169 FSDGIGKITPDLAMEVAKKLQLMENPPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKSMD 1990
FSDGIGKITP+LAMEVA+KLQL ENPPSAYQIRYAG KGVVAVWPG+DDG+RLSLR SM+
Sbjct: 589 FSDGIGKITPELAMEVAEKLQLTENPPSAYQIRYAGTKGVVAVWPGDDDGIRLSLRPSMN 648
Query: 1989 KFHSMHRMLEIVSWTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDPDI 1810
KF S H MLE+VSWTRFQPGFLNRQIVTLLS+L+VPD VFA MQDSM++KL+Q LVD D+
Sbjct: 649 KFESSHTMLEVVSWTRFQPGFLNRQIVTLLSSLNVPDSVFASMQDSMIYKLNQMLVDTDV 708
Query: 1809 AFEVLTTSCAEQGNVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKGRW 1630
AF+VLT+SCAEQGN AA+MLSAGFKPQTEPHLKAMLSCIR +QL DL +KAR FV KGRW
Sbjct: 709 AFDVLTSSCAEQGNTAAIMLSAGFKPQTEPHLKAMLSCIRSAQLGDLLAKARXFVPKGRW 768
Query: 1629 LMGCLDELGVLEQGQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCLHP 1450
LMGCLDELGVLE GQCFIQ+S PSLENCF+KHGSRFS K+N++VIVGTVA+AKNPCLHP
Sbjct: 769 LMGCLDELGVLEHGQCFIQSSIPSLENCFMKHGSRFSGIKKNRQVIVGTVAIAKNPCLHP 828
Query: 1449 GDIRILEAVDVPGLHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKRS 1270
GDIRILEAVDVP LHHLVDC VFPQKG+RPH+NEASGSDLDGDLYFVTWDENLIPP K+S
Sbjct: 829 GDIRILEAVDVPSLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPGKKS 888
Query: 1269 WMPMAYTPAEAKNEPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEKCL 1090
W+PM YTPA+ K EPR + +D++DFF+KN+ N+NLG+ICNAHVVHAD SEYGA+DEKCL
Sbjct: 889 WIPMDYTPAKPKLEPRGVTPRDIIDFFLKNMVNENLGVICNAHVVHADCSEYGALDEKCL 948
Query: 1089 KLAELAATAVDFPKTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDASD 910
+LAELAATAVDFPKTGK+V MP +LKPKVYPDFM KD SY+S+K+LG LYR IKDA+D
Sbjct: 949 QLAELAATAVDFPKTGKLVMMPPALKPKVYPDFMGKDDHMSYQSQKVLGILYRNIKDATD 1008
Query: 909 EDNSSELISAYEDLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEGEVVT 730
D SSEL+ E+LPYD +L+I GA DYL +AW +CSYD QLNALL Q+ V EGEVVT
Sbjct: 1009 NDVSSELLCTAEELPYDADLDIPGASDYLADAWXKQCSYDGQLNALLAQYRVRSEGEVVT 1068
Query: 729 GHICSLGKHNSRKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYEMKAS 550
GHI SL K+NSRKQGE+KERL NAY AL+K++RR FE M PDF +LTD+E+ + YE KAS
Sbjct: 1069 GHIWSLPKYNSRKQGELKERLRNAYSALHKEFRRIFENMGPDFQQLTDDEKCLSYEQKAS 1128
Query: 549 AWYQVTYHPRWVKKSIETEEPDGEMVPPRLSFAWIPADYLVRIKVKHLEKGRVGSGKPID 370
AWYQVTY PRW+KK E EE DG+ VP RLSFAWI ADYLVRIK++ ++GR + +PID
Sbjct: 1129 AWYQVTYQPRWIKKLSEIEEADGDAVPARLSFAWIAADYLVRIKIRSGDRGRFDNKRPID 1188
Query: 369 SLASYLYERI 340
+LA YL ERI
Sbjct: 1189 TLACYLSERI 1198
>ref|XP_009389500.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
SHL2 [Musa acuminata subsp. malaccensis]
Length = 1199
Score = 1570 bits (4064), Expect = 0.0
Identities = 783/1209 (64%), Positives = 951/1209 (78%), Gaps = 1/1209 (0%)
Frame = -1
Query: 3963 MGSLGSSRDRKATVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESYP 3784
M S + ++K ++QVSF GFD + +A+ LA LE + +IWRCR+K+S TP ESYP
Sbjct: 1 MDSFHRNTEQKEMTVSQVSFGGFDAKVSAKELADFLEYEAG-IIWRCRVKTSWTPPESYP 59
Query: 3783 DFDIDVADSSFPYLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLVAH 3604
F D +F +P+K + VV PHAFV F P ++A+D+AG+C+L +PL A+
Sbjct: 60 VFK--GTDDAFD-VPRKDDYGRVV-PHAFVHFARPDAVKKAMDAAGKCDLVLNGRPLRAN 115
Query: 3603 CGIDSPYRVNXXXXXXXXXXXDVCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFDNC 3424
G +S +RVN + C EIG+L+S EF+ +W+ S ++F+IDPFD+C
Sbjct: 116 VGTESSFRVNRRRTTDPFRFSNACVEIGNLVSRDEFLVSWK---GPDSAVDFVIDPFDDC 172
Query: 3423 CKLFFSRNVAFTVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSAPL 3244
CK+ FS+ AF KG RE+ +I CD K+EFLLRD+ E+RV D P V+ FQL SAP
Sbjct: 173 CKILFSKETAFYFKGLREMTLIMCDFKVEFLLRDINEVRVHKDAAPFVMQFQLI--SAPY 230
Query: 3243 VSYRTADDDIHESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKALH 3064
V YRTADDDI+ S +NLLDDEDPWIRTTD TP+GA+GRC+SYRIS+ PRF PK+E++L
Sbjct: 231 VYYRTADDDIYTSVPFNLLDDEDPWIRTTDITPSGAIGRCNSYRISLSPRFGPKMERSLA 290
Query: 3063 YMKERRIDGLRPERPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKGIFIH 2884
Y++E + RP ++V+DE G S+PFFC K+G++FA MF+VNALVH+GI
Sbjct: 291 YLREHGVAENRPRCRLVVRDEPGYGAHMSDPFFCIQNKKGINFATMFLVNALVHRGIVNQ 350
Query: 2883 HRLSDEFFGLLRGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKTPTPS 2704
H+LS+EFF LLR QSE++N AL HI YK PIFDA RLKLVQ WLLR+ KL++ S
Sbjct: 351 HQLSEEFFSLLRCQSEMVNGTALMHILSYKHPIFDAPGRLKLVQEWLLRNPKLLRHSKFS 410
Query: 2703 EDNIEVRKLVITPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSNVLNF 2524
+D IEVRKLVITPTKAYCLPPE+EL+NRVLRKY++++DRFLRVTF DE Q LNSNVLN+
Sbjct: 411 DDIIEVRKLVITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFTDEGMQQLNSNVLNY 470
Query: 2523 YVAPIVKEVAKNSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWFFAE- 2347
YVAPIV+++ NSF QKT +F+RV++I+ GF+L +KYSFLAFSSNQLR +SAWFFAE
Sbjct: 471 YVAPIVRDITSNSFPQKTTVFKRVKDILTNGFHLYGQKYSFLAFSSNQLRDRSAWFFAEV 530
Query: 2346 DKNISVYDITSWMGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNGYCF 2167
+I+V I +WMGKF KNVAK AARMGQCFSSTYATV V EVN EL DI RNGY F
Sbjct: 531 SGSITVATIRNWMGKFSNKNVAKCAARMGQCFSSTYATVNVTPNEVNSELEDIKRNGYVF 590
Query: 2166 SDGIGKITPDLAMEVAKKLQLMENPPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKSMDK 1987
SDGIGKITP+LA+EVA+KL L E+PPSAYQIRYAGCKGVVAVWPGNDDG++LSLR SM+K
Sbjct: 591 SDGIGKITPELALEVAQKLHLTEDPPSAYQIRYAGCKGVVAVWPGNDDGIKLSLRPSMNK 650
Query: 1986 FHSMHRMLEIVSWTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDPDIA 1807
F S H +LE+VSWTRFQPGFLNRQIVTLLS+L VPD VF MQD+M+ KL+Q L D ++A
Sbjct: 651 FESNHTILEVVSWTRFQPGFLNRQIVTLLSSLKVPDSVFERMQDTMILKLNQILHDTNVA 710
Query: 1806 FEVLTTSCAEQGNVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKGRWL 1627
FE+LTTSCAEQGN AAMMLSAGF+PQ+EPHLKAMLSCIR +QL DL +K +IFV KGR L
Sbjct: 711 FEILTTSCAEQGNTAAMMLSAGFRPQSEPHLKAMLSCIRSTQLGDLLAKTKIFVPKGRLL 770
Query: 1626 MGCLDELGVLEQGQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCLHPG 1447
MGCLDELGVLE GQCFIQAS+PSLENC KHGSRFS ++ N++VIVGTVA+ KNPCLHPG
Sbjct: 771 MGCLDELGVLEHGQCFIQASTPSLENCLSKHGSRFSASQNNRQVIVGTVAVGKNPCLHPG 830
Query: 1446 DIRILEAVDVPGLHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKRSW 1267
DIRILEAVDVP LHHLVDC +FPQ+G+RPH+NEASGSDLDGDLYFVTWDENL+PP K+SW
Sbjct: 831 DIRILEAVDVPELHHLVDCLIFPQRGDRPHTNEASGSDLDGDLYFVTWDENLLPPGKKSW 890
Query: 1266 MPMAYTPAEAKNEPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEKCLK 1087
+PM YTPAE K PR+I+ QD++DF++KN+ N+N G+ICNAHVVHAD+SE+GA+DE CLK
Sbjct: 891 VPMDYTPAEVKQFPRQILPQDIIDFYLKNMVNENHGVICNAHVVHADRSEHGALDENCLK 950
Query: 1086 LAELAATAVDFPKTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDASDE 907
LAELAATAVDFPKTGK+V+MP +LKPK YPDFM K SYKSEKILG+LYRKIKDA+D+
Sbjct: 951 LAELAATAVDFPKTGKIVTMPPALKPKTYPDFMGKVDRLSYKSEKILGKLYRKIKDATDD 1010
Query: 906 DNSSELISAYEDLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEGEVVTG 727
+ SEL +EDLPYDT+LEI G+ DYL +AW+ K YDR LNALL Q+ V EGEVVTG
Sbjct: 1011 ELPSELPCTFEDLPYDTDLEIIGSLDYLADAWQNKVVYDRHLNALLAQYRVSSEGEVVTG 1070
Query: 726 HICSLGKHNSRKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYEMKASA 547
HI SL K+NSRKQGE+KERL NAY +L KQ+R F+ M+PD L+LTD+E+ YEMKASA
Sbjct: 1071 HIWSLPKYNSRKQGELKERLKNAYSSLRKQFRHIFKTMSPDLLQLTDDEKCFFYEMKASA 1130
Query: 546 WYQVTYHPRWVKKSIETEEPDGEMVPPRLSFAWIPADYLVRIKVKHLEKGRVGSGKPIDS 367
WYQVTYHPRWVKK E +EPDG+ VP RLSFAWI ADYLVRIKV+ + +PIDS
Sbjct: 1131 WYQVTYHPRWVKKYNELKEPDGDGVPARLSFAWIAADYLVRIKVRARRGEHQITKRPIDS 1190
Query: 366 LASYLYERI 340
ASYL R+
Sbjct: 1191 FASYLSGRV 1199
>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
protein [Populus trichocarpa]
Length = 1198
Score = 1520 bits (3935), Expect = 0.0
Identities = 752/1203 (62%), Positives = 923/1203 (76%), Gaps = 5/1203 (0%)
Frame = -1
Query: 3933 KATVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESYPDFDI-DVADS 3757
K TV+TQVS GFD TA+ L LE++ ++WRCRLK+S TP ESYP+F+I D+
Sbjct: 8 KETVVTQVSLGGFDIHVTAKDLLEYLEREIG-LVWRCRLKTSWTPPESYPNFEITDITKI 66
Query: 3756 SFPYLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLVAHCGIDSPYRV 3577
+ + E V PHAFV F P A A+D+A RCELF K L A G ++P+ +
Sbjct: 67 T------RTEDYRRVEPHAFVHFALPQSATCAIDAADRCELFLNNKGLKASLGPENPFTL 120
Query: 3576 NXXXXXXXXXXXD-VCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFDNCCKLFFSRN 3400
N V EIG+L+S EF WR P +G++FL+DPFD C+ FSRN
Sbjct: 121 NQRRRKTTPFKLSGVGVEIGTLVSRDEFFVGWRGPP---TGVDFLVDPFDGTCRFCFSRN 177
Query: 3399 VAFTVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSAPLVSYRTADD 3220
AF+ K T E VIKCD K+EFL+RD+ E++ + LV+L QL SAP V YRTADD
Sbjct: 178 TAFSFKSTAEHAVIKCDFKVEFLVRDINEIKQYTETSCLVLLLQLA--SAPRVWYRTADD 235
Query: 3219 DIHESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKALHYMKERRID 3040
DI S ++LLDD+DPWIRTTDFT +GA+GRC SYR+S+ PR PKL KA+ ++KERR+
Sbjct: 236 DIEVSVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQ 295
Query: 3039 GLRPERPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKGIFIHHRLSDEFF 2860
RPI ++DE G ++PFFC H+KEG++F +F+VNA++HKGIF H+LS++FF
Sbjct: 296 EEYLRRPIRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFF 355
Query: 2859 GLLRGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKTPTPSEDNIEVRK 2680
LLR Q +N AAL+HIY Y++P+FDAY +LK+ Q WLL++ K K +D E+R+
Sbjct: 356 DLLRNQPTEVNVAALKHIYPYRRPVFDAYKKLKVAQEWLLKNPKFFKNQKKLDDIAEIRR 415
Query: 2679 LVITPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSNVLNFYVAPIVKE 2500
LVITPTKAYCLPPE+EL+NRVLRKY+D++DRFLRVTFMDE Q +NSN LN++ APIV+
Sbjct: 416 LVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNSNALNYFAAPIVRA 475
Query: 2499 VAKNSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWFFAEDKNISVYDI 2320
+ SF QKT +F+RVR+I+ EGFYLC R+YSFLAFSSNQLR +SAWFFAED+NI+V I
Sbjct: 476 ITSYSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAI 535
Query: 2319 TSWMGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNGYCFSDGIGKITP 2140
SWMGKF KN+AK AARMGQCFSSTYAT+EVP EVN +LPDI RNGY FSDGIG ITP
Sbjct: 536 KSWMGKFTNKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITP 595
Query: 2139 DLAMEVAKKLQLMENPPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKSMDKFHSMHRMLE 1960
DLA EVA+KL+ +PP AYQIRYAGCKGVVA WP DG+RLSLR SM+KF S H +LE
Sbjct: 596 DLAREVAEKLKFDFDPPCAYQIRYAGCKGVVACWPEQGDGIRLSLRSSMNKFQSNHTILE 655
Query: 1959 IVSWTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDPDIAFEVLTTSCA 1780
I SWTRFQPGFLNRQI+TLLSAL+VPD VF MQ+ MV KL+Q LVD D+AF+VLT SCA
Sbjct: 656 ICSWTRFQPGFLNRQIITLLSALNVPDAVFWKMQELMVSKLNQMLVDSDVAFDVLTASCA 715
Query: 1779 EQGNVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKGRWLMGCLDELGV 1600
EQGNVAA+MLSAGFKPQ EPHL+ ML+C+R +QL L KARIFV GRWLMGCLDELGV
Sbjct: 716 EQGNVAAIMLSAGFKPQKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGV 775
Query: 1599 LEQGQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCLHPGDIRILEAVD 1420
LEQGQCFIQ S+ LENCF+KHGS+FS TK+N +V+ GTV +AKNPCLHPGDIRILEAVD
Sbjct: 776 LEQGQCFIQVSNSYLENCFVKHGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIRILEAVD 835
Query: 1419 VPGLHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKRSWMPMAYTPAE 1240
PGLHHL DC VFPQKGERPH+NEASGSDLDGDLYFVTWDENLIPPSKRSW+PM Y AE
Sbjct: 836 APGLHHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAE 895
Query: 1239 AKNEPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEKCLKLAELAATAV 1060
AK R + QD+V+FF KN++N+NLG ICNAHVV AD SEYGA+DEKCL LAELAATAV
Sbjct: 896 AKQLTRPVNHQDIVEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAV 955
Query: 1059 DFPKTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDASDEDN---SSEL 889
DFPKTGK+VSMP+ LKPK+YPDFM K+ QSYKS+KILGRLYR+IKDA D+D+ SSEL
Sbjct: 956 DFPKTGKIVSMPSDLKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSEL 1015
Query: 888 ISAYEDLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEGEVVTGHICSLG 709
D+PYD +LE+ GA D++ +AW+ KCSYD QLN LL Q+ V++E EVVTGH+ S+
Sbjct: 1016 NFVRGDIPYDLDLEVLGATDFISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSMP 1075
Query: 708 KHNSRKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYEMKASAWYQVTY 529
K +SRKQG++KERL ++Y L +++R+ FE+M+ DF +L D+E+NM+YE KASAWYQVTY
Sbjct: 1076 KGSSRKQGDLKERLKHSYNCLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTY 1135
Query: 528 HPRWVKKSIETEEPDGEMVPPRLSFAWIPADYLVRIKVKHLEKGRVGSGKPIDSLASYLY 349
HP W++KS+E ++ DG + LSFAWI ADYL RIK++H G V S KP++SLA YL
Sbjct: 1136 HPHWIQKSLELQDSDGAGISVMLSFAWIAADYLARIKIRHSRIGNVDSAKPVNSLAKYLA 1195
Query: 348 ERI 340
+R+
Sbjct: 1196 DRM 1198
>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
protein [Populus trichocarpa]
Length = 1200
Score = 1517 bits (3927), Expect = 0.0
Identities = 755/1205 (62%), Positives = 924/1205 (76%), Gaps = 7/1205 (0%)
Frame = -1
Query: 3933 KATVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESYPDFDI-DVADS 3757
K TV+TQVS GFD TA+ L L++ ++WRCRLK+S TP ESYP+F+I D+
Sbjct: 8 KETVVTQVSVGGFDIHVTAKDLLEYLDRAIG-LVWRCRLKTSWTPPESYPNFEITDITKI 66
Query: 3756 SFPYLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLVAHCGIDSPYRV 3577
++ E VVPHAFV F P A A++++GRCELF K L G +P+ +
Sbjct: 67 ------ERTEDYRRVVPHAFVHFALPQSATLAMNASGRCELFLNNKALKVSLGPKNPFTL 120
Query: 3576 NXXXXXXXXXXXD-VCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFDNCCKLFFSRN 3400
N V FEIG+L+S EF WR P SG++FL+DPFD CK FSRN
Sbjct: 121 NQRRRTTTPFKLSDVGFEIGNLVSRDEFFVGWRGPP---SGVDFLVDPFDGTCKFCFSRN 177
Query: 3399 VAFTVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSAPLVSYRTADD 3220
AF++K T E VIKCD K+EFL+RD+ E+ + LV+L QL SAP V YRTADD
Sbjct: 178 TAFSLKSTSEHAVIKCDFKVEFLVRDINEIIQYTETSCLVLLLQLA--SAPWVWYRTADD 235
Query: 3219 DIHESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKALHYMKERRID 3040
DI ++LLDD+DPWIRTTDFT +GA+GRC SYR+S+ PR KL KA+ Y+KERR+
Sbjct: 236 DIEAWVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVQ 295
Query: 3039 GLRPE---RPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKGIFIHHRLSD 2869
L+ E R I + DE G S+PFFC H+KEG++F +F+VNA++HKGIF H+LS+
Sbjct: 296 VLQEENHRRRIRILDEPDFGMPMSDPFFCIHHKEGIAFEVLFLVNAVMHKGIFNQHQLSN 355
Query: 2868 EFFGLLRGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKTPTPSEDNIE 2689
+FF LLR Q +N +AL+HI Y++P+F+AY RLK VQ WLL++ L K P D +E
Sbjct: 356 DFFDLLRNQHTEVNVSALKHICTYRRPVFNAYRRLKAVQEWLLKNPNLFKNPKQLGDVVE 415
Query: 2688 VRKLVITPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSNVLNFYVAPI 2509
+R+LVITPTKAYCLPPE+EL+NRVLRKY+D++DRFLRVTFMDE Q +NSNVLN+YVAPI
Sbjct: 416 IRRLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPI 475
Query: 2508 VKEVAKNSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWFFAEDKNISV 2329
V+++ NSF QKT +F+RVR+I+ EGFYLC R+YSFLAFS+NQLR +SAWFF+E++NISV
Sbjct: 476 VRDITSNSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFSEERNISV 535
Query: 2328 YDITSWMGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNGYCFSDGIGK 2149
D+ SWMGKF +N+AK AARMGQCFSSTYAT+EVP EVN +LPDI RNGY FSDGIG
Sbjct: 536 LDVKSWMGKFTNRNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIERNGYVFSDGIGI 595
Query: 2148 ITPDLAMEVAKKLQLMENPPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKSMDKFHSMHR 1969
ITPDLA EVA+KL+L +PP AYQIRYAGCKGVVA WPG DGVRLSLR SM+KF S H
Sbjct: 596 ITPDLAREVAEKLKLDIDPPCAYQIRYAGCKGVVACWPGKGDGVRLSLRPSMNKFQSNHT 655
Query: 1968 MLEIVSWTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDPDIAFEVLTT 1789
LEI SWTRFQPGFLNRQI+TLLS L+VPD VF MQ++MV KL+Q V+ D+AF+VLT
Sbjct: 656 TLEICSWTRFQPGFLNRQIITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTA 715
Query: 1788 SCAEQGNVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKGRWLMGCLDE 1609
SCA+QGNVAA+MLSAGFKP EPHL+ ML+C+R +QL DL K RIFV GRWLMGCLDE
Sbjct: 716 SCADQGNVAAIMLSAGFKPDREPHLRGMLTCVRAAQLWDLREKTRIFVPSGRWLMGCLDE 775
Query: 1608 LGVLEQGQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCLHPGDIRILE 1429
LG+LEQGQCFIQ S+ SLE CF+KHG++FS ++N +VI GTV +AKNPCLHPGD+R+LE
Sbjct: 776 LGMLEQGQCFIQVSNSSLEKCFMKHGAKFSEAEKNLQVIKGTVVIAKNPCLHPGDVRVLE 835
Query: 1428 AVDVPGLHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKRSWMPMAYT 1249
AVDVPGLHHL DC VFPQKGERPH+NEASGSDLDGDLYFVTWDENLIPPSKRSW+PM Y
Sbjct: 836 AVDVPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYD 895
Query: 1248 PAEAKNEPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEKCLKLAELAA 1069
AEAK R + QD+++FF KN+ NDNLG ICNAHVVHAD SEYGA D+ CL LAELAA
Sbjct: 896 AAEAKLLARPVNHQDIIEFFAKNMVNDNLGAICNAHVVHADLSEYGATDKNCLTLAELAA 955
Query: 1068 TAVDFPKTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDASDED--NSS 895
TAVDFPKTGKVVSMP LKPK+YPDFM K+ +QSYKSEKILGRLYR+IKDA DED SS
Sbjct: 956 TAVDFPKTGKVVSMPPYLKPKMYPDFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAASS 1015
Query: 894 ELISAYEDLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEGEVVTGHICS 715
EL D+PYD++LE+ GA DY+ +AW+ KCSYD QLN LL Q+ V++E EVVTGHI S
Sbjct: 1016 ELNLVPGDIPYDSDLEVVGASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEVVTGHIWS 1075
Query: 714 LGKHNSRKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYEMKASAWYQV 535
+ K++SRKQGE+K+RL ++Y +L K++R+ FE+M+ +F +L D E+N +YE KASAWYQV
Sbjct: 1076 MPKYSSRKQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQV 1135
Query: 534 TYHPRWVKKSIETEEPDGEMVPPRLSFAWIPADYLVRIKVKHLEKGRVGSGKPIDSLASY 355
YHP WVKKS+E ++PDG LSFAWI ADYL RIK++H E G V S KP++SLA Y
Sbjct: 1136 VYHPHWVKKSLELQDPDGAGTSVMLSFAWIAADYLARIKIRHRETGNVDSAKPVNSLAKY 1195
Query: 354 LYERI 340
L +R+
Sbjct: 1196 LADRM 1200
>ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
Length = 1195
Score = 1511 bits (3912), Expect = 0.0
Identities = 752/1202 (62%), Positives = 923/1202 (76%), Gaps = 4/1202 (0%)
Frame = -1
Query: 3933 KATVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESYPDFDIDVADSS 3754
K TV+TQVS GFD TA+ L LE++ ++WRCRLK+S TP ESYP+F+I AD +
Sbjct: 8 KETVVTQVSIGGFDIHVTAKDLLEYLEREIG-LVWRCRLKTSWTPPESYPNFEI--ADLT 64
Query: 3753 FPYLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLVAHCGIDSPYRVN 3574
+ E V PHAFV F P A A+D+A RCELF K L A G ++P+ +N
Sbjct: 65 ---KITRTEDYRRVEPHAFVHFALPESATWAIDAADRCELFLNNKGLKASLGPENPFTLN 121
Query: 3573 XXXXXXXXXXXD-VCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFDNCCKLFFSRNV 3397
V EIG+L+S EF WR P +G++FL+DPFD C+ FSRN
Sbjct: 122 QRRRKTTPFKLSDVDVEIGTLVSRDEFFVGWRGPP---TGVDFLVDPFDGTCRFCFSRNT 178
Query: 3396 AFTVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSAPLVSYRTADDD 3217
AF+ K T E VIKCD K+EFL+RD+ E++ + LV+L QL SAP V YRTADDD
Sbjct: 179 AFSFKSTAEHAVIKCDFKVEFLVRDINEIKQYKETSCLVLLLQLA--SAPWVWYRTADDD 236
Query: 3216 IHESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKALHYMKERRIDG 3037
I S ++LLDD+DPWIRTTDFT +GA+GRC SYR+S+ PR PKL KA+ ++KERR+
Sbjct: 237 IEVSVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQE 296
Query: 3036 LRPERPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKGIFIHHRLSDEFFG 2857
RPI ++DE G ++PFFC H+KEG++F +F+VNA++HKGIF H+LS++FF
Sbjct: 297 EYLRRPIRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFD 356
Query: 2856 LLRGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKTPTPSEDNIEVRKL 2677
LLR Q +N AAL+HIY Y++P+FDAY +LK+ Q WLL++ KL K +D E+R+L
Sbjct: 357 LLRNQPTEVNVAALKHIYPYRRPVFDAYKKLKVTQEWLLKNPKLFKNQKKLDDIAEIRRL 416
Query: 2676 VITPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSNVLNFYVAPIVKEV 2497
+ITPTKAYCLPPE+EL+NRVLRKY+D++DRFLRVTFMDE Q +NSN LN++ APIV+ +
Sbjct: 417 IITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGVQTMNSNALNYFAAPIVRAI 476
Query: 2496 AKNSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWFFAEDKNISVYDIT 2317
SF QKT +F+RVR+I+ EGFYLC R+YSFLAFSSNQLR +SAWFFAED+NI+V I
Sbjct: 477 TSYSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIK 536
Query: 2316 SWMGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNGYCFSDGIGKITPD 2137
SWMGKF KN+AK AARMGQCFSSTYAT+EVP EVN +LPDI RNGY FSDGIG ITPD
Sbjct: 537 SWMGKFTNKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPD 596
Query: 2136 LAMEVAKKLQLMENPPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKSMDKFHSMHRMLEI 1957
LA EVA+KL+ +PPSAYQIRYAGCKGVVA WP DG+RLSLR SM+KF S H +LEI
Sbjct: 597 LAREVAEKLKFDFDPPSAYQIRYAGCKGVVACWPEQGDGIRLSLRSSMNKFQSNHTILEI 656
Query: 1956 VSWTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDPDIAFEVLTTSCAE 1777
SWTRFQPGFLNRQI+TLLSAL+VPD VF MQ+ MV KL+Q LVD D+AF+VLT SCAE
Sbjct: 657 CSWTRFQPGFLNRQIITLLSALNVPDAVFWKMQEIMVSKLNQMLVDSDVAFDVLTASCAE 716
Query: 1776 QGNVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKGRWLMGCLDELGVL 1597
GNVAA+MLSAGFKPQ EPHL+ ML+C+R +QL L KARIFV GRWLMGCLDEL VL
Sbjct: 717 LGNVAAIMLSAGFKPQKEPHLRGMLNCVRAAQLWGLREKARIFVPSGRWLMGCLDELAVL 776
Query: 1596 EQGQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCLHPGDIRILEAVDV 1417
EQGQCFIQ S+ LENCF+KHGS+FS TK N +V+ GTV +AKNPCLHPGDIRILEAVD
Sbjct: 777 EQGQCFIQVSNSYLENCFVKHGSKFSETKRNLQVVKGTVVIAKNPCLHPGDIRILEAVDD 836
Query: 1416 PGLHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKRSWMPMAYTPAEA 1237
PGLHHL DC VFPQKGERPH+NEASGSDLDGDLYFVTWDENLIPPSKRSW+PM Y AEA
Sbjct: 837 PGLHHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEA 896
Query: 1236 KNEPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEKCLKLAELAATAVD 1057
K R + QD+++FF KN++N+NLG ICNAHVV AD SEYGA+DEKCL LAELAATAVD
Sbjct: 897 KQLTRPVNHQDIIEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVD 956
Query: 1056 FPKTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDASDEDN---SSELI 886
FPKTGK+VSMP+ LKPK+YPDFM K+ QSYKS+KILGRLYR+IKDA D+D+ SS+L
Sbjct: 957 FPKTGKIVSMPSDLKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSDLN 1016
Query: 885 SAYEDLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEGEVVTGHICSLGK 706
D+PYD +LE+ GA DY+ +AW+ KCSYD QLN LL Q+ V++E EVVTGH+ S+ K
Sbjct: 1017 FVPGDVPYDLDLEVLGATDYISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSMPK 1076
Query: 705 HNSRKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYEMKASAWYQVTYH 526
+SR+QG++KERL ++Y L +++R+ FE+M+ DF +L D+E+NM+YE KASAWYQVTYH
Sbjct: 1077 GSSRQQGDLKERLKHSYNCLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTYH 1136
Query: 525 PRWVKKSIETEEPDGEMVPPRLSFAWIPADYLVRIKVKHLEKGRVGSGKPIDSLASYLYE 346
PRW++KS+E ++ DG + LSFAWI ADYL RIK++H G V S KPI+SLA YL +
Sbjct: 1137 PRWIQKSLELQDSDGAAM---LSFAWIAADYLARIKIRHSRIGNVDSAKPINSLAKYLAD 1193
Query: 345 RI 340
R+
Sbjct: 1194 RM 1195
>ref|XP_011026450.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
Length = 1200
Score = 1510 bits (3909), Expect = 0.0
Identities = 753/1205 (62%), Positives = 925/1205 (76%), Gaps = 7/1205 (0%)
Frame = -1
Query: 3933 KATVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESYPDFDI-DVADS 3757
K TV+TQVS GF TA+ L+ L++ ++WRCRLK+S TP ESYP+F+I D+
Sbjct: 8 KETVVTQVSVGGFGIHVTAKDLSEYLDRAIG-LVWRCRLKTSWTPPESYPNFEITDITKI 66
Query: 3756 SFPYLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLVAHCGIDSPYRV 3577
++ E VVPHAFV F P A A++++ RCELF K L G +P+ +
Sbjct: 67 ------ERTEDYRRVVPHAFVHFALPQSATWAMNASERCELFLNDKALKVSLGPKNPFTL 120
Query: 3576 NXXXXXXXXXXXD-VCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFDNCCKLFFSRN 3400
N V FEIGSL+S EF WR P SG++FL+DPFD C+ FSRN
Sbjct: 121 NQQRRTTTPFKLSDVGFEIGSLVSHDEFFVGWRGPP---SGVDFLVDPFDGTCRFCFSRN 177
Query: 3399 VAFTVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSAPLVSYRTADD 3220
AF++K T E VIKC K+EFL+RD+ E+ + LV+L QL SAP V YRTADD
Sbjct: 178 TAFSLKSTSEHAVIKCAFKVEFLVRDINEIIQYTETSCLVLLLQLA--SAPWVWYRTADD 235
Query: 3219 DIHESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKALHYMKERRID 3040
DI ++LLDD+DPWIRTTDFT +GA+GRC SYR+S+ PR KL KA+ Y+KERR++
Sbjct: 236 DIEAWVPFDLLDDDDPWIRTTDFTGSGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVE 295
Query: 3039 GLRPE---RPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKGIFIHHRLSD 2869
L+ E R I + DE G S+PFFC H+KEG++F +F+VNA++HKGIF H+LS+
Sbjct: 296 VLQEENHRRRIRILDEPDFGMPMSDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSN 355
Query: 2868 EFFGLLRGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKTPTPSEDNIE 2689
+FF LLR Q +N +AL+HI Y++P+F+AY RLK VQ WLL++ L K P D +E
Sbjct: 356 DFFDLLRNQHTEVNVSALKHICTYRRPVFNAYKRLKAVQEWLLKNPNLFKNPKQLGDIVE 415
Query: 2688 VRKLVITPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSNVLNFYVAPI 2509
+R+LVITPTKAYCLPPE+EL+NRVLRKY+D++DRFLRVTFMDE Q +NSNVLN+YVAPI
Sbjct: 416 IRRLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPI 475
Query: 2508 VKEVAKNSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWFFAEDKNISV 2329
V+++ NSF QKT +F+RVR+I+ EGFYLC R+YSFLAFS+NQLR +SAWFFAE++N+SV
Sbjct: 476 VRDITSNSFHQKTRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFAEERNVSV 535
Query: 2328 YDITSWMGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNGYCFSDGIGK 2149
DI SWMGKF +N+AK AARMGQCFSSTYAT+EVP EVN +LPDI RNGY FSDGIG
Sbjct: 536 LDIKSWMGKFTNRNIAKCAARMGQCFSSTYATIEVPPEEVNFDLPDIERNGYVFSDGIGI 595
Query: 2148 ITPDLAMEVAKKLQLMENPPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKSMDKFHSMHR 1969
ITPDLA EVA+KL+L +PP AYQIRYAGCKGVVA WPG DGV LSLR SM+KF S H
Sbjct: 596 ITPDLAREVAEKLKLDIDPPCAYQIRYAGCKGVVACWPGKGDGVHLSLRPSMNKFQSNHT 655
Query: 1968 MLEIVSWTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDPDIAFEVLTT 1789
LEI SWTRFQPGFLNRQI+TLLS L+VPD VF MQ++MV KL+Q V+ D+AF+VLT
Sbjct: 656 TLEICSWTRFQPGFLNRQIITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTA 715
Query: 1788 SCAEQGNVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKGRWLMGCLDE 1609
SCA+QGNVAA+MLSAGFKPQ EPHL+ ML+C+R +QL L KARIFV GRWLMGCLDE
Sbjct: 716 SCADQGNVAAIMLSAGFKPQKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDE 775
Query: 1608 LGVLEQGQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCLHPGDIRILE 1429
LG+LEQGQCFIQ S+ SLE CF+KHG++FS K+N +V+ GTV +AKNPCLHPGD+R+LE
Sbjct: 776 LGMLEQGQCFIQVSNSSLEKCFIKHGAKFSEAKKNLQVVKGTVVIAKNPCLHPGDVRVLE 835
Query: 1428 AVDVPGLHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKRSWMPMAYT 1249
AVDVPGLHHL DC VFPQKGERPH+NEASGSDLDGDLYFVTWDENLIPPSKRSW+PM Y
Sbjct: 836 AVDVPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYD 895
Query: 1248 PAEAKNEPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEKCLKLAELAA 1069
AEAK R + QD+++FF KN+ N+NLG ICNAHVVHAD SE+GAMDEKCL LAELAA
Sbjct: 896 AAEAKLLARPVNHQDIIEFFAKNMVNENLGAICNAHVVHADLSEHGAMDEKCLTLAELAA 955
Query: 1068 TAVDFPKTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDASDED--NSS 895
TAVDFPKTGKVV+MP+ LKPKVYPDFM K+ +QSYKSEKILGRLYR+IKDA DED SS
Sbjct: 956 TAVDFPKTGKVVTMPSYLKPKVYPDFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAASS 1015
Query: 894 ELISAYEDLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEGEVVTGHICS 715
EL D+PYD++LE+ GA DY+ +AW+ KCSYD QLN LL Q+ V++E E+VTGHI S
Sbjct: 1016 ELNPVPGDIPYDSDLEVVGASDYINDAWDQKCSYDGQLNGLLSQYKVKREEELVTGHIWS 1075
Query: 714 LGKHNSRKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYEMKASAWYQV 535
+ K++SRKQGE+K+RL ++Y +L K++R+ FE+M+ +F +L D E+N +YE KASAWYQV
Sbjct: 1076 MPKYSSRKQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQV 1135
Query: 534 TYHPRWVKKSIETEEPDGEMVPPRLSFAWIPADYLVRIKVKHLEKGRVGSGKPIDSLASY 355
YHP WVKKS+E ++PDG LSF WI ADYL RIK++H E G V S KP++SLA Y
Sbjct: 1136 AYHPHWVKKSLELQDPDGAGTSVMLSFGWIAADYLARIKIRHRETGNVDSAKPVNSLAKY 1195
Query: 354 LYERI 340
L +RI
Sbjct: 1196 LADRI 1200
>ref|XP_010254390.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera]
gi|719995135|ref|XP_010254391.1| PREDICTED: RNA-dependent
RNA polymerase 6-like [Nelumbo nucifera]
gi|719995138|ref|XP_010254392.1| PREDICTED: RNA-dependent
RNA polymerase 6-like [Nelumbo nucifera]
gi|719995142|ref|XP_010254393.1| PREDICTED: RNA-dependent
RNA polymerase 6-like [Nelumbo nucifera]
Length = 1193
Score = 1500 bits (3884), Expect = 0.0
Identities = 739/1210 (61%), Positives = 922/1210 (76%), Gaps = 2/1210 (0%)
Frame = -1
Query: 3963 MGSLGSSRDRKATVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESYP 3784
MGS G+ D +I+QVSF GFD+ TA L LE++ IWRCRLK+S TP ESYP
Sbjct: 1 MGSEGTKNDM---IISQVSFGGFDNNVTASELTDFLEKEIG-TIWRCRLKTSSTPPESYP 56
Query: 3783 DFDIDVADSSFPYLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLVAH 3604
D+D+ D+ +K + V PHAFV F +P A ALD+AGRC+L PL +
Sbjct: 57 DYDVTDMDAI-----QKTDGYDKVKPHAFVHFLSPEAATAALDAAGRCDLVLNRHPLKVN 111
Query: 3603 CGIDSPYRVNXXXXXXXXXXXD-VCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFDN 3427
G SP+ +N C +IGSL+ EFV W+ + ++F++DPFD
Sbjct: 112 LGPQSPFLLNQRRRKIDPFKIPDSCIKIGSLVGQDEFVVCWK-----APQVDFIVDPFDR 166
Query: 3426 CCKLFFSRNVAFTVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSAP 3247
CK+ F++ AF+ K T VIKC+ KLEF + D+ ++ LV+L L L S+P
Sbjct: 167 TCKILFTKETAFSFKDTMAYVVIKCNFKLEFFVSDISYIKQYTGRSSLVIL--LHLRSSP 224
Query: 3246 LVSYRTADDDIHESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKAL 3067
+ YRTADDDI++S +++LDDEDPWIRTTDFTP+ +GRC+SYRIS+ PRF P+L K +
Sbjct: 225 CIYYRTADDDIYDSVPFDMLDDEDPWIRTTDFTPSRVIGRCNSYRISISPRFGPRLNKVM 284
Query: 3066 HYMKERRIDGLRPERPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKGIFI 2887
+Y+++ RI P P+ ++DE + G SE FFC +KEG+SF +FM+NA++HKGI
Sbjct: 285 NYLRKHRIPDESPRMPLRIRDEPNFGMLMSEFFFCIDHKEGMSFETIFMLNAVIHKGIIN 344
Query: 2886 HHRLSDEFFGLLRGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKTPTP 2707
H+LSDEFF LLR QS +N AL++IY Y++P+ +AY+ LK Q LL + KLIK
Sbjct: 345 QHQLSDEFFELLRSQSTDVNVTALQNIYSYRQPVLNAYTSLKDAQRCLLDNPKLIKISKG 404
Query: 2706 SEDNIEVRKLVITPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSNVLN 2527
S+D +E+RKLVITPTKAYCLPPE+EL+NRVLRKY+ +++RFLRV+F DER Q L+SN LN
Sbjct: 405 SDDFVEMRKLVITPTKAYCLPPEVELSNRVLRKYKHVANRFLRVSFKDERMQQLSSNALN 464
Query: 2526 FYVAPIVKEVAKNSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWFFAE 2347
+YVAPIV+++ N F QKT +F RV+ I++ GF+LC RKYSFLAFSSNQLR +SAWFFAE
Sbjct: 465 YYVAPIVRDITSNPFPQKTTVFNRVKTILSNGFFLCGRKYSFLAFSSNQLRDRSAWFFAE 524
Query: 2346 DKNISVYDITSWMGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNGYCF 2167
DKNI V ++ WMG+F +NVAK AARMG CFSSTYATVEVP EVN ELPDI RNGY F
Sbjct: 525 DKNIKVIEVKKWMGRFTNRNVAKCAARMGLCFSSTYATVEVPLKEVNLELPDIERNGYVF 584
Query: 2166 SDGIGKITPDLAMEVAKKLQLMENPPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKSMDK 1987
SDGIG +TPDL+MEVA+KLQL NPP AYQIRYAGCKGV+ WPG +DG+RLSLR SM+K
Sbjct: 585 SDGIGMLTPDLSMEVAEKLQLTANPPCAYQIRYAGCKGVIVCWPGKEDGIRLSLRPSMNK 644
Query: 1986 FHSMHRMLEIVSWTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDPDIA 1807
F S H +LE+ SWTRFQP +LNRQI+TLLSAL VPDDVF+ MQDSMV KL+Q + + D+A
Sbjct: 645 FESRHTILEVCSWTRFQPSYLNRQIITLLSALCVPDDVFSRMQDSMVSKLNQMIENTDVA 704
Query: 1806 FEVLTTSCAEQGNVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKGRWL 1627
F+V+T+SCAEQGN AA+MLSAGFKPQ EPHLK MLSCIR +QL+DL K+RIFV GRWL
Sbjct: 705 FDVVTSSCAEQGNTAAIMLSAGFKPQMEPHLKGMLSCIRAAQLRDLLEKSRIFVPSGRWL 764
Query: 1626 MGCLDELGVLEQGQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCLHPG 1447
MGCLDEL VLE+GQCFIQ S PSLENCF KHGSRFS K+N +V+ G VA+AKNPCLHPG
Sbjct: 765 MGCLDELAVLEEGQCFIQVSKPSLENCFSKHGSRFSEVKKNTQVVKGIVAIAKNPCLHPG 824
Query: 1446 DIRILEAVDVPGLHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKRSW 1267
DIRILEA+DVP LHHL+DC VFPQKG+RPH+NEASGSDLDGDLYFVTWDE+LIPPSK+S
Sbjct: 825 DIRILEAIDVPSLHHLIDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDEHLIPPSKQSL 884
Query: 1266 MPMAYTPAEAKNEPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEKCLK 1087
+PM Y+PAE K PR + +DL+DFF+K++ N+ LG+ICNAHVVHAD SEYGA+DEKC++
Sbjct: 885 VPMDYSPAEVKKLPRDVNHRDLIDFFMKSMVNEKLGVICNAHVVHADLSEYGALDEKCIQ 944
Query: 1086 LAELAATAVDFPKTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDASDE 907
LAELAATAVDFPKTGKVV++P LKPK YPDFM K+ FQSYKS KILG+LYRKIKD SDE
Sbjct: 945 LAELAATAVDFPKTGKVVTVPQELKPKRYPDFMGKEEFQSYKSNKILGKLYRKIKDFSDE 1004
Query: 906 D-NSSELISAYEDLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEGEVVT 730
D SE+ A ED+PYD LE+ G+ D+L +AW KC +D QL LLGQ+ V +E EVVT
Sbjct: 1005 DVEESEITFAAEDIPYDVHLEVLGSSDHLADAWNLKCLHDAQLTTLLGQYKVNREEEVVT 1064
Query: 729 GHICSLGKHNSRKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYEMKAS 550
GHI S+ K+NS KQGE+KERL NAY AL K++R+AFE+++ + L+LTD+E+N IYE KAS
Sbjct: 1065 GHIWSMPKYNSNKQGELKERLKNAYNALKKEFRQAFEKID-ETLQLTDDEKNTIYEQKAS 1123
Query: 549 AWYQVTYHPRWVKKSIETEEPDGEMVPPRLSFAWIPADYLVRIKVKHLEKGRVGSGKPID 370
AWYQVTYHPRW+ K+++ E + E P LSFAWIPADYLVRIK+KH + V + KPI+
Sbjct: 1124 AWYQVTYHPRWIMKTLKLREHEDESNPAMLSFAWIPADYLVRIKIKHRDMENVDARKPIN 1183
Query: 369 SLASYLYERI 340
+LA+YL +RI
Sbjct: 1184 ALANYLADRI 1193
>ref|XP_012071453.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
gi|643731347|gb|KDP38635.1| hypothetical protein
JCGZ_03988 [Jatropha curcas]
Length = 1198
Score = 1494 bits (3869), Expect = 0.0
Identities = 745/1210 (61%), Positives = 911/1210 (75%), Gaps = 5/1210 (0%)
Frame = -1
Query: 3954 LGSSRDRKATVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESYPDFD 3775
+G+ R K TV+TQVSF GF++ A+ L LE+ V WRCRLK+S TP ESYP+F
Sbjct: 1 MGTERSEKDTVVTQVSFGGFENHVNAKDLVAYLEEVIGQV-WRCRLKTSWTPPESYPNFK 59
Query: 3774 I-DVADSSFPYLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLVAHCG 3598
I D A K+ E PHAFV F A A ++AGRCELF +PL G
Sbjct: 60 ITDTAGIHRTNEYKRVE------PHAFVHFALAESATWAKNAAGRCELFLNDRPLKVSLG 113
Query: 3597 IDSPYRVNXXXXXXXXXXXD-VCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFDNCC 3421
++P+ +N VC EIG ++S EF+ WR P SG++FL+DPFD C
Sbjct: 114 PENPFTLNQRRRKTIPSKLSDVCIEIGMMVSRDEFLVGWRGPP---SGVDFLVDPFDGTC 170
Query: 3420 KLFFSRNVAFTVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSAPLV 3241
K F+R+ AF++K T + VI+CD KLEFL+RD+ E++ D LV+L QL SAP V
Sbjct: 171 KFCFTRDTAFSIKDTNKHAVIRCDFKLEFLVRDINEIKQYKDTSYLVILLQLA--SAPWV 228
Query: 3240 SYRTADDDIHESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKALHY 3061
YRTADDDI +NLLDD+DPWIRTTDFTP+GA+GRC+SYR+S+ PR KLE+A++Y
Sbjct: 229 WYRTADDDIEVLVPFNLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLERAINY 288
Query: 3060 MKERRIDGLRPERPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKGIFIHH 2881
+KERR+ RP+ + +E G S+PFFC H KEG++F +F+VNA++HKGIF H
Sbjct: 289 LKERRVQVDSLRRPLKILNEPDYGMPMSDPFFCIHRKEGIAFEIVFLVNAVMHKGIFNQH 348
Query: 2880 RLSDEFFGLLRGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKTPTPSE 2701
+LSD+FF LLR Q +N AAL+HI YK+P+FDA+ RLK VQ WLL++ KL K P +
Sbjct: 349 QLSDDFFDLLRNQPADINVAALKHICSYKRPVFDAHRRLKAVQEWLLKNPKLFKCPKQLD 408
Query: 2700 DNIEVRKLVITPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSNVLNFY 2521
D +++R+L ITPT+AYCLPPEIEL+NRVLRKY++ +DRFLRVTFMDE Q +N+N L +Y
Sbjct: 409 DIVQIRRLAITPTRAYCLPPEIELSNRVLRKYKNFADRFLRVTFMDEGLQTINANTLTYY 468
Query: 2520 VAPIVKEVAKNSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWFFAEDK 2341
VAPIV+++ SFSQKT +F+RV++I+ +GFYLC R+YSFLAFSSNQLR +SAWFFAED
Sbjct: 469 VAPIVRDITSTSFSQKTRIFKRVKSILTDGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDG 528
Query: 2340 NISVYDITSWMGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNGYCFSD 2161
I V I WMGKF KN+AK AARMGQCFSSTYATVEVPS EVN PDI RNGY FSD
Sbjct: 529 KIRVDQIRKWMGKFTNKNIAKCAARMGQCFSSTYATVEVPSAEVNLAHPDIERNGYTFSD 588
Query: 2160 GIGKITPDLAMEVAKKLQLMENPPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKSMDKFH 1981
GIG ITPDLA VA+KL+L NPP AYQIRYAGCKGVVA WP DG+RLSLR SM+KF
Sbjct: 589 GIGMITPDLAKAVAEKLKLDINPPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQ 648
Query: 1980 SMHRMLEIVSWTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDPDIAFE 1801
S H LEI SWTRFQPGFLNRQI+TLLS L+V D++F MQ +MV KL++ L D D+AF+
Sbjct: 649 SNHTTLEICSWTRFQPGFLNRQIITLLSTLNVSDEIFWKMQIAMVSKLNKMLTDADVAFD 708
Query: 1800 VLTTSCAEQGNVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKGRWLMG 1621
V+T SC EQGN AA+MLSAGFKPQ EPHL+ ML+CIR +Q DL KARIFV GRWLMG
Sbjct: 709 VITASCTEQGNTAALMLSAGFKPQNEPHLRGMLTCIRAAQFCDLREKARIFVSSGRWLMG 768
Query: 1620 CLDELGVLEQGQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCLHPGDI 1441
CLDELGVLEQGQCFIQ S+PSLE CF KHGSRFS TK+N +VI GTV +AKNPCLHPGD+
Sbjct: 769 CLDELGVLEQGQCFIQVSNPSLETCFSKHGSRFSETKKNLQVITGTVVIAKNPCLHPGDV 828
Query: 1440 RILEAVDVPGLHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKRSWMP 1261
RILEAVD PGL HL DC VFPQKG+RPH+NEASGSDLDGDLYFVTWDENLIPPSK+SW P
Sbjct: 829 RILEAVDAPGLCHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKQSWTP 888
Query: 1260 MAYTPAEAKNEPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEKCLKLA 1081
M Y AE K R + QD++DFF KN+ N++LG ICNAHVV AD SEYGA+DE C+KLA
Sbjct: 889 MQYDAAEPKLLSRPVSHQDIIDFFAKNMVNESLGAICNAHVVRADLSEYGALDENCIKLA 948
Query: 1080 ELAATAVDFPKTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDASDEDN 901
ELAATAVDFPKTGK+V++P LKPK+YPDFM K+ +QSYKS KILGRLYR IKDA +D+
Sbjct: 949 ELAATAVDFPKTGKLVTLPQYLKPKMYPDFMGKEEYQSYKSTKILGRLYRDIKDAYGDDD 1008
Query: 900 ---SSELISAYEDLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEGEVVT 730
SSEL + D+PYDT LE+ G+ DY++EAW+ KCSYD QL LLGQ+ V+KE E+VT
Sbjct: 1009 AAASSELNCSSGDIPYDTNLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKKEEELVT 1068
Query: 729 GHICSLGKHNSRKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYEMKAS 550
GHI S+ +NSRK GE+KERL ++Y AL K++R+ FE+M+ DF +LTD+E+N++YE KAS
Sbjct: 1069 GHIWSMPMYNSRKLGELKERLKHSYSALKKEFRQVFEKMDLDFEQLTDDEKNLLYERKAS 1128
Query: 549 AWYQVTYHPRWVKKSIETEEPDGEMVPPRLSFAWIPADYLVRIKVKHLEKGRVGSGKPID 370
AWYQVTYHP+W+KKS+E +EPD LSFAWI ADYL RIK+KH V + KP++
Sbjct: 1129 AWYQVTYHPKWIKKSLELQEPDAAGNATILSFAWIAADYLARIKIKHRGTEGVDTAKPVN 1188
Query: 369 SLASYLYERI 340
SL YL +RI
Sbjct: 1189 SLVKYLADRI 1198
>ref|XP_008219491.1| PREDICTED: RNA-dependent RNA polymerase 6 [Prunus mume]
Length = 1196
Score = 1491 bits (3860), Expect = 0.0
Identities = 740/1200 (61%), Positives = 924/1200 (77%), Gaps = 4/1200 (0%)
Frame = -1
Query: 3927 TVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESYPDFDIDVADSSFP 3748
+V+TQVSF GF A+ L LE + V++RCRLK+S TP ES+P+F+I+ AD
Sbjct: 10 SVVTQVSFGGFQHHVRAKDLVTYLEDEIG-VVYRCRLKTSWTPPESFPNFEINTADV--- 65
Query: 3747 YLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLVAHCGIDSPYRVNXX 3568
K+ + V PHAFV F +P A+D+AGRCELF +PL G+++PY +N
Sbjct: 66 ---KRTDDYSRVEPHAFVHFVSPDSVTFAMDAAGRCELFLNNEPLKVSMGLENPYFLNRR 122
Query: 3567 XXXXXXXXXD-VCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFDNCCKLFFSRNVAF 3391
V EIGSL+ EF +WR P G++F++DPFD CK F+ + AF
Sbjct: 123 RRTKTPFKLSDVHVEIGSLVRQDEFFVSWRGPPY---GVDFIVDPFDGTCKFCFTMDTAF 179
Query: 3390 TVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSAPLVSYRTADDDIH 3211
+ KGT++ VIKCD K+EFL+R++ E++ D LV+L L L S+P VSYRTADDDI
Sbjct: 180 SFKGTKKHAVIKCDFKVEFLVREIAEIKQYTDTSYLVIL--LRLTSSPWVSYRTADDDID 237
Query: 3210 ESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKALHYMKERRIDGLR 3031
+S ++LLDD+DPWIRTTDFTP+GA+GRC+SYR+ + PR KL+KA++Y++ERR+ +
Sbjct: 238 QSVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVLIPPRHGAKLKKAMNYLRERRVKEVC 297
Query: 3030 PERPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKGIFIHHRLSDEFFGLL 2851
+ P ++DE G S++EPFF Y+E +SF MF+VNA++HKG H+LSD FF LL
Sbjct: 298 IKWPPRIQDEPDFGMSNTEPFFSIQYEEDISFEIMFLVNAVMHKGTVNQHQLSDSFFHLL 357
Query: 2850 RGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKTPTPSEDNIEVRKLVI 2671
R Q + +N AAL+H+ Y+ P+FDA RLK+VQ+WLL++ KL+K P +D +EVR+LVI
Sbjct: 358 RSQPKEINVAALKHLCSYRNPVFDACERLKVVQDWLLKNPKLVKDPKRLDDIVEVRRLVI 417
Query: 2670 TPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSNVLNFYVAPIVKEVAK 2491
TPTKAYCLPPE+EL+NRVLRKY++++DRFLRVTFMDE Q +NSNVLN+YVAPIVKE+
Sbjct: 418 TPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQKINSNVLNYYVAPIVKEITS 477
Query: 2490 NSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWFFAEDKNISVYDITSW 2311
NSF QKTN+F+R RNI+N+GFYLC RKY+FLAFSSNQLR +SAWFFAE NISV ITSW
Sbjct: 478 NSFLQKTNVFKRFRNILNDGFYLCGRKYTFLAFSSNQLRDRSAWFFAECVNISVGKITSW 537
Query: 2310 MGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNGYCFSDGIGKITPDLA 2131
MGKF KNVAK AARMGQCFSSTYATVEVPS EVN ++PDI RNGY FSDGIG ITPDLA
Sbjct: 538 MGKFNNKNVAKCAARMGQCFSSTYATVEVPSSEVN-DIPDIERNGYIFSDGIGMITPDLA 596
Query: 2130 MEVAKKLQLMENPPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKSMDKFHSMHRMLEIVS 1951
+EVA+KL+L NPP AYQIR+AGCKGVVA WP D RLSLR SM+KF S H LEI S
Sbjct: 597 LEVAEKLKLDRNPPCAYQIRFAGCKGVVACWPSKGDRFRLSLRTSMNKFESKHATLEICS 656
Query: 1950 WTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDPDIAFEVLTTSCAEQG 1771
WTR+QPGFLNRQI+TLLS L V D++F MQ+ MV KL+Q LVD D+AF+VLT+SCAEQG
Sbjct: 657 WTRYQPGFLNRQIITLLSTLKVEDEIFWRMQEKMVLKLNQMLVDTDVAFDVLTSSCAEQG 716
Query: 1770 NVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKGRWLMGCLDELGVLEQ 1591
N AA+MLSAGFKPQTEPHL+ ML+CI+ +QL L KARIFV GRWLMG LDELGVLEQ
Sbjct: 717 NAAAIMLSAGFKPQTEPHLRGMLTCIQAAQLWGLREKARIFVHSGRWLMGVLDELGVLEQ 776
Query: 1590 GQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCLHPGDIRILEAVDVPG 1411
GQCF+Q S+PSLE+CF KHGS F++ + N +VI G V +AKNPCLHPGDIRILEAVD PG
Sbjct: 777 GQCFVQVSTPSLESCFAKHGSSFAQIERNLQVIKGYVVIAKNPCLHPGDIRILEAVDAPG 836
Query: 1410 LHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKRSWMPMAYTPAEAKN 1231
LHHL DC VFPQKG+RPH++EASGSDLDGDLYFVTWDENLIPPSK+SWMPM Y PAEAK
Sbjct: 837 LHHLYDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLIPPSKKSWMPMQYDPAEAKR 896
Query: 1230 EPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEKCLKLAELAATAVDFP 1051
+ R + +QD++DFFVKN++N+NLG ICNAHVVHAD+S+YGA+DE CLKLAELAA AVDFP
Sbjct: 897 QGRPVTQQDIIDFFVKNMTNENLGPICNAHVVHADRSDYGALDENCLKLAELAALAVDFP 956
Query: 1050 KTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDASDED--NSSELISAY 877
KTGK+V++P LKP++YPDF+ K+ QSYKS KILGRLYRK++DA DED +SEL
Sbjct: 957 KTGKIVTLPQHLKPRLYPDFLGKEDNQSYKSTKILGRLYRKVRDAYDEDAATTSELHYVP 1016
Query: 876 EDLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEGEVVTGHICSLGKHNS 697
D+PYD +LE+ GA D++ +AWE KCSYD QL L+GQ+ V++E E+VTGH+ S+ K NS
Sbjct: 1017 SDIPYDMDLEVPGAADFIFDAWEKKCSYDGQLKGLMGQYKVKREEEIVTGHVWSIPKSNS 1076
Query: 696 RKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYEMKASAWYQVTYHPRW 517
+KQGE+KERL ++Y AL K++R+ FE ++ + LTD+E+N++ E KASAWYQVTYHP+W
Sbjct: 1077 KKQGELKERLSHSYNALKKEFRQMFENLDSNLEALTDDEKNILCEKKASAWYQVTYHPKW 1136
Query: 516 VKKSIETEEPDGE-MVPPRLSFAWIPADYLVRIKVKHLEKGRVGSGKPIDSLASYLYERI 340
VK+S +EPDG V LSFAWI ADYL RIK+K + S KPI+SL YL +RI
Sbjct: 1137 VKQSPPLQEPDGPGDVVVMLSFAWIAADYLARIKIKCRGVEHIDSTKPINSLKRYLADRI 1196
>ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
gi|462422376|gb|EMJ26639.1| hypothetical protein
PRUPE_ppa000422mg [Prunus persica]
Length = 1196
Score = 1484 bits (3842), Expect = 0.0
Identities = 739/1200 (61%), Positives = 921/1200 (76%), Gaps = 4/1200 (0%)
Frame = -1
Query: 3927 TVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESYPDFDIDVADSSFP 3748
+V+TQVSF GF A+ L LE + +++RCRLK+S TP ES+P+F+I+ AD
Sbjct: 10 SVVTQVSFGGFQHHARAKDLVTYLEDEIG-LVYRCRLKTSWTPPESFPNFEINTADV--- 65
Query: 3747 YLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLVAHCGIDSPYRVNXX 3568
K+ + V PHAFV F +P A+D+AGRCELF +PL G ++PY +N
Sbjct: 66 ---KRTDDYSRVEPHAFVHFVSPDSVTFAMDAAGRCELFFNNEPLKVSLGPENPYFLNRR 122
Query: 3567 XXXXXXXXXD-VCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFDNCCKLFFSRNVAF 3391
V EIGSL+ EF ++WR P G++F++DPFD CK F+ + AF
Sbjct: 123 RRTKTPFKLSDVHVEIGSLVRQDEFFASWRGPPY---GVDFIVDPFDGTCKFCFTMDTAF 179
Query: 3390 TVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSAPLVSYRTADDDIH 3211
+ KGT++ VIKCD K+EFL+R++ E++ D LV+L L L S+P VSYRTADDDI
Sbjct: 180 SFKGTKKHAVIKCDFKVEFLVREIAEIKQYTDTSYLVIL--LRLTSSPWVSYRTADDDID 237
Query: 3210 ESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKALHYMKERRIDGLR 3031
+S ++LLDD+DPWIRTTDFTP+GA+GRC+SYR+ + PR KL+KA++Y++ERR+ +
Sbjct: 238 QSVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVLIPPRHGAKLKKAMNYLRERRVKEVC 297
Query: 3030 PERPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKGIFIHHRLSDEFFGLL 2851
+ P ++DE G S++EPFF Y+EG+SF MF+VNA++HKG H+LSD FF LL
Sbjct: 298 IKWPPKIQDEPDFGMSNTEPFFSIQYEEGISFEIMFLVNAVMHKGTVNQHQLSDSFFHLL 357
Query: 2850 RGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKTPTPSEDNIEVRKLVI 2671
R Q + +N AAL+H+ Y+ P+FDA RLK+VQ+WLL++ KL+K P +D EVR+LVI
Sbjct: 358 RSQPKEINVAALKHLCSYRSPVFDACERLKVVQDWLLKNPKLVKDPKRLDDIAEVRRLVI 417
Query: 2670 TPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSNVLNFYVAPIVKEVAK 2491
TPTKAYCLPPE+EL+NRVLRKY++++DRFLRVTFMDE Q +NSNVLN+YVAPIVKE+
Sbjct: 418 TPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQKINSNVLNYYVAPIVKEITS 477
Query: 2490 NSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWFFAEDKNISVYDITSW 2311
NSF QKTN+F+R R I+N+GFYLC RKY+FLAFSSNQLR +SAWFFAE NISV ITSW
Sbjct: 478 NSFLQKTNVFKRFRTILNDGFYLCGRKYTFLAFSSNQLRDRSAWFFAECVNISVGKITSW 537
Query: 2310 MGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNGYCFSDGIGKITPDLA 2131
MGKF KNVAK AARMGQCFSSTYATVEV S EVN ++PDI RNGY FSDGIG ITPDLA
Sbjct: 538 MGKFNNKNVAKCAARMGQCFSSTYATVEVTSSEVN-DIPDIKRNGYVFSDGIGMITPDLA 596
Query: 2130 MEVAKKLQLMENPPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKSMDKFHSMHRMLEIVS 1951
+EVA+KL+L NPP AYQIR+AGCKGVVA WP DG RLSLR SM+KF S H LEI S
Sbjct: 597 LEVAEKLKLDRNPPCAYQIRFAGCKGVVACWPSKGDGFRLSLRTSMNKFESKHTTLEICS 656
Query: 1950 WTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDPDIAFEVLTTSCAEQG 1771
WTR+QPGFLNRQI+TLLS L+V D++F MQ+ MV KL+Q LVD D+AF+VLT SCAEQG
Sbjct: 657 WTRYQPGFLNRQIITLLSTLNVEDEIFWRMQEKMVLKLNQMLVDTDVAFDVLTASCAEQG 716
Query: 1770 NVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKGRWLMGCLDELGVLEQ 1591
N AA+MLSAGFKPQTEPHL+ ML+CI+ +QL L KARIFV GRWLMG LDELGVLEQ
Sbjct: 717 NAAAIMLSAGFKPQTEPHLRGMLTCIQAAQLWGLREKARIFVHSGRWLMGVLDELGVLEQ 776
Query: 1590 GQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCLHPGDIRILEAVDVPG 1411
GQCF+Q S+P LE+CF KHGS F++ + N +VI G V +AKNPCLHPGDIRILEAVD PG
Sbjct: 777 GQCFVQVSTPLLESCFAKHGSSFAQIERNLQVIKGHVVIAKNPCLHPGDIRILEAVDAPG 836
Query: 1410 LHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKRSWMPMAYTPAEAKN 1231
LHHL DC VFPQKG+RPH++EASGSDLDGDLYFVTWDENLIPPSK+SWMPM Y PAEAK
Sbjct: 837 LHHLYDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLIPPSKKSWMPMQYDPAEAKL 896
Query: 1230 EPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEKCLKLAELAATAVDFP 1051
+ R + +QD++DFFVKN++N+NLG ICNAHVVHAD+S+YGA+D CLKLAELAA AVDFP
Sbjct: 897 QGRPVTQQDIIDFFVKNMTNENLGPICNAHVVHADRSDYGALDVNCLKLAELAALAVDFP 956
Query: 1050 KTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDASDED--NSSELISAY 877
KTGK+VS+P LKP++YPDF+ K+ QSYKS KILGRLYRK++DA DED SSEL
Sbjct: 957 KTGKIVSLPQHLKPRLYPDFLGKEDNQSYKSTKILGRLYRKVRDAYDEDAATSSELHYFP 1016
Query: 876 EDLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEGEVVTGHICSLGKHNS 697
D+PYD +LE+ GA D++ +AWE KCSYD QL L+GQ+ V++E E+VTGH+ S+ K NS
Sbjct: 1017 SDIPYDMDLEVPGAADFVFDAWEKKCSYDGQLKGLMGQYKVKREEEIVTGHVWSIPKSNS 1076
Query: 696 RKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYEMKASAWYQVTYHPRW 517
+KQGE+KERL ++Y AL K++R+ FE ++ + LTD+E+N++ E KASAWYQVTYHP+W
Sbjct: 1077 KKQGELKERLSHSYNALKKEFRQMFENLDSNLEALTDDEKNLLCEKKASAWYQVTYHPKW 1136
Query: 516 VKKSIETEEPDGE-MVPPRLSFAWIPADYLVRIKVKHLEKGRVGSGKPIDSLASYLYERI 340
VK+S +EPDG V LSFAWI ADYL RIK+K + S KPI+SL YL +RI
Sbjct: 1137 VKQSPPLQEPDGPGDVVVMLSFAWIAADYLARIKIKCHGVEHIDSTKPINSLKRYLADRI 1196
>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
gi|731385864|ref|XP_010648660.1| PREDICTED: RNA-dependent
RNA polymerase 6 [Vitis vinifera]
gi|731385866|ref|XP_010648661.1| PREDICTED: RNA-dependent
RNA polymerase 6 [Vitis vinifera]
Length = 1197
Score = 1482 bits (3836), Expect = 0.0
Identities = 759/1217 (62%), Positives = 923/1217 (75%), Gaps = 9/1217 (0%)
Frame = -1
Query: 3963 MGSLGSSRDRKATVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESYP 3784
M S GS +D V+TQ+S GFD TA L LE V RCRLK+S TP ESYP
Sbjct: 1 MESEGSEKDM---VVTQISIGGFDQYVTATELTYYLEDTIGSVD-RCRLKTSSTPPESYP 56
Query: 3783 DFDI-DVADSSFPYLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLVA 3607
DF+I D A ++ E V PHAFV F +P A ALD+AG+ ELF KPL
Sbjct: 57 DFEIIDTAKI------ERTEDYKKVEPHAFVHFVSPEAATWALDAAGKSELFLHGKPLKV 110
Query: 3606 HCGIDSPYRVNXXXXXXXXXXXD-VCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFD 3430
G ++P+ +N V EIG L+S E+ + WR SSG++FL+DPFD
Sbjct: 111 SLGPETPFHLNQRRRTTFPFKFPDVRLEIGILVSRDEYFAGWR---GPSSGVDFLVDPFD 167
Query: 3429 NCCKLFFSRNVAFTVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSA 3250
CK F+++ AF+ KG + VIKC+ K+EFL+R++ E+R D L++L QL S+
Sbjct: 168 GTCKFLFTKDTAFSFKGMPKHAVIKCNFKVEFLVREINEVRQRRDMSSLILLLQLS--SS 225
Query: 3249 PLVSYRTADDDIHESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKA 3070
P V YRTADDDI E+ ++LLDD+DPWIRTTDFT +GA+GRC+SYRIS+ PR+ KL+KA
Sbjct: 226 PFVYYRTADDDIEETVPFDLLDDDDPWIRTTDFTVSGAIGRCNSYRISIPPRYGAKLKKA 285
Query: 3069 LHYMKERRIDGLR--PERPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKG 2896
+ Y++ RR++ L P+ + V+DE G S+PFFC +KEG+ F MF+VNA++HKG
Sbjct: 286 MDYLRARRVNVLEDSPKWQLRVRDEPDFGLPMSDPFFCIQHKEGIDFRVMFLVNAVMHKG 345
Query: 2895 IFIHHRLSDEFFGLLRGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKT 2716
I H+LSD+FF LLR Q + +N AAL+HI Y+ P+FDAY RLKLV WLL++ KL+K+
Sbjct: 346 IINQHQLSDKFFDLLRSQQKDINIAALKHICSYRHPVFDAYQRLKLVHKWLLKNPKLLKS 405
Query: 2715 PTPSEDNIEVRKLVITPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSN 2536
P +D +EVR+LVITP+KAYCLPPE+EL+NRVLR Y+++SDRFLRVTFMDE Q +N+N
Sbjct: 406 PKELDDIVEVRRLVITPSKAYCLPPEVELSNRVLRNYKEVSDRFLRVTFMDEGMQTINAN 465
Query: 2535 VLNFYVAPIVKEVAKNSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWF 2356
VLN+YVAPIVK + NSF QKT +F+RV+ I+ +GFYLC RKYSFLAFSSNQLR +SAWF
Sbjct: 466 VLNYYVAPIVKVITSNSFPQKTRVFKRVKTILTDGFYLCGRKYSFLAFSSNQLRDRSAWF 525
Query: 2355 FAEDKNISVYDITSWMGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNG 2176
FAEDK SV I SWMGKF +NVAK AARMGQCFSSTYATVEVPS+EV ELPDI RNG
Sbjct: 526 FAEDKKTSVRAIKSWMGKFTNRNVAKCAARMGQCFSSTYATVEVPSWEVK-ELPDIKRNG 584
Query: 2175 YCFSDGIGKITPDLAMEVAKKLQLMENPPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKS 1996
Y FSDGIGKI PDLAMEVA+KL+L E PSAYQIRYAGCKGVVA WP ++DG+RLS R S
Sbjct: 585 YDFSDGIGKIVPDLAMEVAEKLKL-EGTPSAYQIRYAGCKGVVACWPSDNDGIRLSWRPS 643
Query: 1995 MDKFHSMHRMLEIVSWTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDP 1816
M+KF S H +LEI SWTRFQPGFLNRQIVTLLSAL+VPD +F MQ+SM+ KL+Q L D
Sbjct: 644 MNKFLSDHTILEICSWTRFQPGFLNRQIVTLLSALNVPDKIFWKMQESMISKLNQMLTDT 703
Query: 1815 DIAFEVLTTSCAEQGNVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKG 1636
D+AF+VL SCAEQGN AA+MLSAGFKPQTEPHL+ ML+CIR +Q L KARIFV G
Sbjct: 704 DVAFDVLIASCAEQGNTAAIMLSAGFKPQTEPHLQGMLTCIRAAQFWGLREKARIFVPSG 763
Query: 1635 RWLMGCLDELGVLEQGQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCL 1456
RWLMGCLDELGVLEQGQCFIQ SSPSLENCFLKHGSRFS K N KVI G VA+AKNPCL
Sbjct: 764 RWLMGCLDELGVLEQGQCFIQVSSPSLENCFLKHGSRFSAQK-NLKVIKGIVAIAKNPCL 822
Query: 1455 HPGDIRILEAVDVPGLHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSK 1276
HPGD+RILEAVD PGL HLVDC VFPQKG+RPHSNEASGSDLDGDLYFVTW+E LIPPSK
Sbjct: 823 HPGDVRILEAVDAPGLEHLVDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWEETLIPPSK 882
Query: 1275 RSWMPMAYTPAEAKNEPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEK 1096
+SW PM Y AEAK R++ D++DFF KN+ N+NLG ICNAHVVHAD+SEYGA+DE
Sbjct: 883 QSWPPMQYDSAEAKALAREVTSLDIIDFFTKNMVNENLGAICNAHVVHADRSEYGALDEA 942
Query: 1095 CLKLAELAATAVDFPKTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDA 916
CL LAE AATAVDFPKTGK+V++P LKPK+YPDFM K+ FQ+Y+S KILG++YR+IKDA
Sbjct: 943 CLDLAERAATAVDFPKTGKLVTLPPYLKPKMYPDFMGKEEFQTYRSNKILGKMYRQIKDA 1002
Query: 915 SDED--NSSELISAYEDLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEG 742
+ED SSE I + +P+D +L I G+ D++ +AW KCSYD QLN LLGQ+ V++E
Sbjct: 1003 YNEDVSESSEQIFGADKVPFDEDLGIPGSADFINDAWIHKCSYDGQLNGLLGQYKVKREE 1062
Query: 741 EVVTGHICSLGKHNSRKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYE 562
EVVTGH+ S+ K+ SRKQGE+ ERL +AY +L K++R+ FE+MN DF +LTD+E+N +YE
Sbjct: 1063 EVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNSDFDQLTDDEKNRLYE 1122
Query: 561 MKASAWYQVTYHPRWVKKSIETEEPD---GEMVPPRLSFAWIPADYLVRIKVKHLEKGRV 391
KASAWYQVTYHP WVKKS+E + PD GE V LSFAWI ADYL RIK++ G V
Sbjct: 1123 QKASAWYQVTYHPTWVKKSLELQNPDEVFGERV--MLSFAWITADYLARIKIRRKGTGNV 1180
Query: 390 GSGKPIDSLASYLYERI 340
S KPI+SLA +L +RI
Sbjct: 1181 DSSKPINSLARFLVDRI 1197
>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
putative [Ricinus communis]
Length = 1203
Score = 1476 bits (3820), Expect = 0.0
Identities = 735/1212 (60%), Positives = 911/1212 (75%), Gaps = 9/1212 (0%)
Frame = -1
Query: 3948 SSRDRKATVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESYPDFDID 3769
+ R K TV+TQVSF GFD TA L L+ + V WRCRLK+S TP ESYP+F+I
Sbjct: 3 TKRREKETVVTQVSFGGFDKDVTARDLVAYLDNEIGQV-WRCRLKTSWTPPESYPNFEI- 60
Query: 3768 VADSSFPYLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLVAHCGIDS 3589
D++ + ++ ++ V PHAFV F +P A A ++AG CELF +P+ G ++
Sbjct: 61 -TDTA---VIQRVDAYRRVEPHAFVHFASPDSATWAKNAAGHCELFFNGRPVKVSLGPEN 116
Query: 3588 PYRVNXXXXXXXXXXXD-VCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFDNCCKLF 3412
P+ +N V EIG+L+S EF+ WR P SG++FL+DPFD CK
Sbjct: 117 PFHLNQRRRTTIPFKLSDVHVEIGTLVSRDEFLVGWRGPP---SGVDFLVDPFDGKCKFC 173
Query: 3411 FSRNVAFTVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSAPLVSYR 3232
F+R+ AF+ KGT E VI+CD KLEFL+RD+ E++ D LV+L QL SAP V YR
Sbjct: 174 FTRDTAFSFKGTTEHAVIRCDFKLEFLVRDINEIKQYTDTSCLVILLQLA--SAPSVWYR 231
Query: 3231 TADDDIHESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKALHYMKE 3052
TADDDI ++LLDD+DPWIRTTDFTP+GA+GRC+SYR+S+ PR KL++AL++++E
Sbjct: 232 TADDDIEVLVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLKRALNFLRE 291
Query: 3051 RRIDGLRPERPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKGIFIHHRLS 2872
RR+ RP+ V E S+PFFC H++EGV F MF+VNA++HKGIF H+LS
Sbjct: 292 RRVQEDCLRRPLHVTAEPEYEMPMSDPFFCIHHEEGVDFNLMFLVNAVMHKGIFNQHQLS 351
Query: 2871 DEFFGLLRGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKTPTPSEDNI 2692
D FF LLR Q +N AALRHI YK P+FDA+ RLK VQ WLL++ KL ++ +D +
Sbjct: 352 DSFFDLLRNQPLDVNIAALRHICSYKHPVFDAHKRLKAVQQWLLKNPKLFRSSKQLDDIV 411
Query: 2691 EVRKLVITPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSNVLNFYVAP 2512
E+R+L ITPT+AYCLPPE+EL+NRVLR+Y+DI+D+FLRVTFMDE Q +N+N L +Y AP
Sbjct: 412 EIRRLAITPTRAYCLPPEVELSNRVLRRYKDIADQFLRVTFMDEGLQTMNANTLTYYCAP 471
Query: 2511 IVKEVAKNSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWFFAEDKNIS 2332
IV+++ NSFSQKT +F+RV++I+ +GFYLC RKYSFLAFSSNQLR +SAWFFAED S
Sbjct: 472 IVRDITSNSFSQKTRIFKRVKSILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKTS 531
Query: 2331 VYDITSWMGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNGYCFSDGIG 2152
V I +WMGKF +N+AK AARMGQCFSSTYATVEVPS E +LPDI RN Y FSDGIG
Sbjct: 532 VSKIRNWMGKFTNRNIAKCAARMGQCFSSTYATVEVPSAEAILDLPDIERNNYIFSDGIG 591
Query: 2151 KITPDLAMEVAKKLQLMENPPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKSMDKFHSMH 1972
ITPDLA EVA+KL+L NPP AYQIRYAGCKGVVA WP + DG+RLSLR SM+KFHS H
Sbjct: 592 MITPDLAKEVAEKLKLEVNPPCAYQIRYAGCKGVVACWPAHIDGIRLSLRVSMNKFHSNH 651
Query: 1971 RMLEIVSWTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDPDIAFEVLT 1792
LEI SWTRFQPGFLNRQI+TLLS LDVPD++F MQ MV KL+Q +D D+AF+V+T
Sbjct: 652 TTLEICSWTRFQPGFLNRQIITLLSTLDVPDEIFWKMQIVMVSKLNQMFMDADVAFDVVT 711
Query: 1791 TSCAEQGNVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKGRWLMGCLD 1612
SCAEQGN AA+MLSAGF P+TEPHL ML+CIR +QL L K RIFV GRWLMGCLD
Sbjct: 712 ASCAEQGNTAAIMLSAGFNPKTEPHLCGMLTCIRAAQLWGLREKTRIFVPSGRWLMGCLD 771
Query: 1611 ELGVLEQGQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCLHPGDIRIL 1432
ELGVLE GQCFIQ S+PSLE+CF KHGSRFS +K+ +V+ GTV +AKNPCLHPGDIRIL
Sbjct: 772 ELGVLEHGQCFIQVSNPSLESCFWKHGSRFSESKKKLQVVKGTVVVAKNPCLHPGDIRIL 831
Query: 1431 EAVDVPGLHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKRSWMPMAY 1252
EAVD P LHHL DC VFPQKG+RPH+NEASGSDLDGDLYFVTWDENLIPPSKRSW+PM Y
Sbjct: 832 EAVDAPELHHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWLPMQY 891
Query: 1251 TPAEAKNEPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEKCLKLAELA 1072
AEAK R + QD++DFF KN+ N+NLG ICNAHVVHAD SEYGA+DE C+KLAELA
Sbjct: 892 DAAEAKQLNRPVNHQDIIDFFAKNMVNENLGAICNAHVVHADLSEYGALDENCIKLAELA 951
Query: 1071 ATAVDFPKTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDASDEDN--- 901
ATAVDFPKTGK+V+MP LKPK+YPDFM K+ +QSY S KILGRLYR++KD ++D+
Sbjct: 952 ATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEDYQSYNSNKILGRLYRQVKDDYNDDDDDD 1011
Query: 900 -----SSELISAYEDLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEGEV 736
SSEL D+PYD +LE+ G+ DY+++AW+ KCSYD QL LL Q+ V++E EV
Sbjct: 1012 DDAATSSELNLVRGDIPYDKDLEVSGSSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEV 1071
Query: 735 VTGHICSLGKHNSRKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYEMK 556
VTGHI S+ K NSRKQGE+KERL +Y++L K++R+ FE+M+ DF +LT++E+N++YE K
Sbjct: 1072 VTGHIWSMPKCNSRKQGELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQK 1131
Query: 555 ASAWYQVTYHPRWVKKSIETEEPDGEMVPPRLSFAWIPADYLVRIKVKHLEKGRVGSGKP 376
ASAWYQV YHP+WV KS+E +EPD LSFAWI ADYL RIK++ V + KP
Sbjct: 1132 ASAWYQVAYHPKWVNKSMELQEPDAAGCASMLSFAWIAADYLARIKIRCRGFDGVDTSKP 1191
Query: 375 IDSLASYLYERI 340
++SL YL +RI
Sbjct: 1192 VNSLVKYLADRI 1203
>ref|XP_012076580.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
gi|643724398|gb|KDP33599.1| hypothetical protein
JCGZ_07170 [Jatropha curcas]
Length = 1199
Score = 1472 bits (3810), Expect = 0.0
Identities = 732/1208 (60%), Positives = 908/1208 (75%), Gaps = 5/1208 (0%)
Frame = -1
Query: 3948 SSRDRKATVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESYPDFDI- 3772
+ + K TV+TQVSF GFD+ A+ L LE++ V WRCRLK+S TP ESYP+F+I
Sbjct: 3 TQKSEKDTVVTQVSFGGFDNHVKAKDLVAYLEEEIGQV-WRCRLKTSWTPPESYPNFEIT 61
Query: 3771 DVADSSFPYLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLVAHCGID 3592
D A + K+ E PHAFV F + A A ++AG CELF +PL G +
Sbjct: 62 DAAAIHRTHEYKRVE------PHAFVHFASAESATWAKNAAGHCELFLNDRPLKVSLGPE 115
Query: 3591 SPYRVNXXXXXXXXXXXD-VCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFDNCCKL 3415
+P+ +N VC EIG+L+S EF+ WR SSG++FL+DPFD CK
Sbjct: 116 NPFHLNQRRRKNIPFKLSDVCIEIGTLVSRDEFLVGWR---GPSSGVDFLVDPFDGTCKF 172
Query: 3414 FFSRNVAFTVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSAPLVSY 3235
F+ + AF++K T + +I+CD KLEFL+RD+ E++ D +V+L QL SAPLV Y
Sbjct: 173 CFTMDTAFSIKDTTKHAIIRCDFKLEFLVRDINEVKQYTDTSCIVILLQLA--SAPLVWY 230
Query: 3234 RTADDDIHESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKALHYMK 3055
RTADDDI S ++LLDD+DPWIRTTDFTP+GA+GRC+ YR+S+ PR KL++A +++K
Sbjct: 231 RTADDDIEVSVPFDLLDDDDPWIRTTDFTPSGAIGRCNFYRVSIPPRHGAKLKRARNFLK 290
Query: 3054 ERRIDGLRPERPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKGIFIHHRL 2875
ERR+ RP+ + +E G S+PFFC H+KEG++F MF+VNA++HKGIF H+L
Sbjct: 291 ERRVQEDSLRRPLKIVNEPDYGMPMSDPFFCIHHKEGIAFEIMFLVNAVMHKGIFNQHQL 350
Query: 2874 SDEFFGLLRGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKTPTPSEDN 2695
SD FF LLR QS +N AAL+HI YK+P+FDA+ LK VQ WLL++ KL K +D
Sbjct: 351 SDNFFDLLRNQSLDINVAALKHICSYKQPVFDAHKGLKAVQEWLLKNPKLFKRSKQLDDI 410
Query: 2694 IEVRKLVITPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSNVLNFYVA 2515
+E+R+L +TPT+AYCLPPE+EL+NRVLRKY++I+DRFLRVTFMDE Q +N+N L +YVA
Sbjct: 411 VEIRRLALTPTRAYCLPPEVELSNRVLRKYKNIADRFLRVTFMDEGLQTINANTLTYYVA 470
Query: 2514 PIVKEVAKNSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWFFAEDKNI 2335
PIV+++ SFSQKT +FRRV++I+ +GF LC R+YSFLAFSSNQLR +SAWFFAED I
Sbjct: 471 PIVRDITSTSFSQKTRIFRRVKSILTDGFNLCGRRYSFLAFSSNQLRDRSAWFFAEDGKI 530
Query: 2334 SVYDITSWMGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNGYCFSDGI 2155
SV I WMG+F +N+AK AARMGQCFSSTYATVEVPS EVN LPDI RNGY FSDGI
Sbjct: 531 SVGQIRKWMGRFTNRNIAKCAARMGQCFSSTYATVEVPSSEVNHALPDIERNGYIFSDGI 590
Query: 2154 GKITPDLAMEVAKKLQLMENPPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKSMDKFHSM 1975
G ITPDLA EVA+KL+L N P AYQIRYAGCKGVVA WP DG+RLSLR SM+KF S
Sbjct: 591 GTITPDLAKEVAEKLKLDINLPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQSN 650
Query: 1974 HRMLEIVSWTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDPDIAFEVL 1795
H LEI SWTRFQPGFLNRQI+TLLS L+V D+VF MQ +MV KL++ L D D+AF+V+
Sbjct: 651 HTTLEICSWTRFQPGFLNRQIITLLSTLNVSDEVFWEMQTAMVSKLNKMLTDADVAFDVI 710
Query: 1794 TTSCAEQGNVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKGRWLMGCL 1615
T SCAEQGN AA+MLSAGFKPQ EPHL+ ML+CIR +Q L KARIFV GRWLMGCL
Sbjct: 711 TKSCAEQGNTAAIMLSAGFKPQNEPHLRGMLTCIRAAQFWGLREKARIFVTSGRWLMGCL 770
Query: 1614 DELGVLEQGQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCLHPGDIRI 1435
DELGVLEQGQCFIQ S+P LE CF KHGS+FS TK+N +VI GTV +AKNPCLHPGD+RI
Sbjct: 771 DELGVLEQGQCFIQVSNPCLETCFSKHGSKFSETKKNLQVIKGTVVIAKNPCLHPGDVRI 830
Query: 1434 LEAVDVPGLHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKRSWMPMA 1255
LEAVD PGLHHL DC VFPQKG+RPH+NEASGSDLDGDLYFVTWD+NLIPPSK+SW PM
Sbjct: 831 LEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKKSWTPMQ 890
Query: 1254 YTPAEAKNEPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEKCLKLAEL 1075
Y AEAK R + QD++DFF KN+ N+NLG ICNAHVVHAD SE+GA+DE C+KLAEL
Sbjct: 891 YDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAICNAHVVHADLSEHGALDENCIKLAEL 950
Query: 1074 AATAVDFPKTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDASDEDNS- 898
AATAVDFPKTGK+V+MP LKPK+YPDFM K+ +QSYKS KILGRLYR+I DA +D++
Sbjct: 951 AATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEYQSYKSTKILGRLYRQIIDAYGDDDAA 1010
Query: 897 --SELISAYEDLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEGEVVTGH 724
SEL D+PYD +LE+ G+ DY++EAW+ KCSYD QL LLGQ+ V++E E+VTGH
Sbjct: 1011 AFSELNCLSGDIPYDADLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKREEELVTGH 1070
Query: 723 ICSLGKHNSRKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYEMKASAW 544
I S+ NSRKQG++KERL ++Y AL K++R+ FE MN D +LTD+E+N+ YE KASAW
Sbjct: 1071 IWSMPMSNSRKQGDLKERLKHSYSALKKEFRQVFEGMNLDVEQLTDDEKNLQYERKASAW 1130
Query: 543 YQVTYHPRWVKKSIETEEPDGEMVPPRLSFAWIPADYLVRIKVKHLEKGRVGSGKPIDSL 364
YQV YHP+W+KKS+E +E D LSF+WI ADYL RIK+K + + KP++SL
Sbjct: 1131 YQVAYHPKWIKKSLELQESDAPGNATMLSFSWIAADYLARIKIKRRGTEGIDTAKPVNSL 1190
Query: 363 ASYLYERI 340
YL +RI
Sbjct: 1191 VKYLTDRI 1198
>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
6 [Theobroma cacao]
Length = 1197
Score = 1467 bits (3799), Expect = 0.0
Identities = 736/1211 (60%), Positives = 910/1211 (75%), Gaps = 3/1211 (0%)
Frame = -1
Query: 3963 MGSLGSSRDRKATVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESYP 3784
M S GS +D TV+TQVS GF A+ L + + V+WRCRLK+S TP ESYP
Sbjct: 1 MESQGSEKD---TVVTQVSVGGFGRHVAAKDLMEYFDNEVG-VVWRCRLKTSWTPPESYP 56
Query: 3783 DFDIDVADSSFPYLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLVAH 3604
+F+I DS+ + ++ + V PHAFV F +P A A+D+AGR EL + L
Sbjct: 57 NFEI--LDST---VIQRTDDYKKVEPHAFVHFASPLTATWAVDAAGRTELVFNNQLLKVS 111
Query: 3603 CGIDSPYRVNXXXXXXXXXXXD-VCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFDN 3427
G ++PY +N VC +IG ++S EF WR P G++FL+DPFD
Sbjct: 112 LGPENPYYLNRRRRNTTPFKLSDVCLDIGGMVSRDEFFVGWRGPP---FGVDFLVDPFDG 168
Query: 3426 CCKLFFSRNVAFTVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSAP 3247
CK FSR+ AF+ KGT E VIKCD K+EFL+RD+ E++ + LVV QL S+P
Sbjct: 169 TCKFCFSRDTAFSFKGTTEYAVIKCDFKVEFLVRDINEIKQYTEPSGLVVFLQLA--SSP 226
Query: 3246 LVSYRTADDDIHESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKAL 3067
V YRTADD+I ES ++LLDD+D WIRTTDFTP+GA+GRC++YR+ ++PR KL+KAL
Sbjct: 227 RVWYRTADDEIEESVPFDLLDDDDQWIRTTDFTPSGAIGRCNTYRVVIRPRHGAKLKKAL 286
Query: 3066 HYMKERRIDGLRPERPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKGIFI 2887
Y++E+R+ P+ + DE G S S+PF+C YKEG+ F MF+VNA++HKGIF
Sbjct: 287 DYLREQRVPMDYVRWPLRISDEPDFGRSMSDPFYCIDYKEGIPFEIMFLVNAVMHKGIFN 346
Query: 2886 HHRLSDEFFGLLRGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKTPTP 2707
H+LS++FF LLR Q +N AAL+HIY Y++P+FDAY RLK V +WLLR+ L K+P
Sbjct: 347 QHQLSEDFFNLLRDQPREVNVAALKHIYSYRRPVFDAYKRLKTVHDWLLRNPILFKSPKQ 406
Query: 2706 SEDNIEVRKLVITPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSNVLN 2527
+D +E+R+LVITPTKA+CL PE+EL+NRVLRKY++++DRFLRVTFMDE Q +N+NVL
Sbjct: 407 LDDIVEIRRLVITPTKAHCLLPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTINANVLT 466
Query: 2526 FYVAPIVKEVAKNSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWFFAE 2347
+Y A IV++V FSQKT +F+RVR+I+ +GFYLC RKYSFLAFS+NQLR SAWFFAE
Sbjct: 467 YYAASIVRDVTSTFFSQKTGVFKRVRSILTDGFYLCGRKYSFLAFSANQLRDSSAWFFAE 526
Query: 2346 DKNISVYDITSWMGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNGYCF 2167
D SV I WMGKF +N+AK AARMGQCFSSTYATVEVPS EVNP LPDI RNGY F
Sbjct: 527 DGKTSVLQILRWMGKFTNRNIAKCAARMGQCFSSTYATVEVPSTEVNPFLPDIERNGYVF 586
Query: 2166 SDGIGKITPDLAMEVAKKLQLMENPPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKSMDK 1987
SDGIGKITPDLA EVA+KL+L NPP AYQIRYAGCKGVVA WP DGVRLSLR SM+K
Sbjct: 587 SDGIGKITPDLAKEVAQKLKLDLNPPCAYQIRYAGCKGVVACWPEEGDGVRLSLRCSMNK 646
Query: 1986 FHSMHRMLEIVSWTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDPDIA 1807
F S H LEI SWTRFQPGFLNRQI+TLLS VPD+VF MQ++MV KL++ LVD D+A
Sbjct: 647 FFSDHTTLEICSWTRFQPGFLNRQIITLLSTQYVPDEVFWEMQNTMVSKLNKILVDTDVA 706
Query: 1806 FEVLTTSCAEQGNVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKGRWL 1627
FEVLT+SC+EQGN AA+MLSAGFKPQTEPHL+ +L+C+R SQL L KARIFV GRWL
Sbjct: 707 FEVLTSSCSEQGNAAAIMLSAGFKPQTEPHLRGILTCVRASQLCGLREKARIFVPSGRWL 766
Query: 1626 MGCLDELGVLEQGQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCLHPG 1447
MG LDELGVLEQGQCFIQ S+PS+ENCFLKHGSRF+ TK+N +VI G V +AKNPCLHPG
Sbjct: 767 MGVLDELGVLEQGQCFIQVSNPSVENCFLKHGSRFAETKKNFEVIQGLVVIAKNPCLHPG 826
Query: 1446 DIRILEAVDVPGLHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKRSW 1267
DIRILEAVD PGLHHL DC VFPQKGERPH+NEASGSDLDGDLYFVTW++ LIPP K+SW
Sbjct: 827 DIRILEAVDAPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWEDLLIPPGKKSW 886
Query: 1266 MPMAYTPAEAKNEPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEKCLK 1087
PM Y P E K R++ +D++DFF KN+ N++LG ICNAHVVHAD SEYGA+DEKC+
Sbjct: 887 PPMQYDPGETKEIQREVNHKDIIDFFAKNMVNEHLGTICNAHVVHADLSEYGALDEKCIH 946
Query: 1086 LAELAATAVDFPKTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDASDE 907
LAELAATAVDFPKTGK+VSMPA+LKPK+YPDFM K+ +QSYKS KILGRLYR IKD DE
Sbjct: 947 LAELAATAVDFPKTGKIVSMPANLKPKLYPDFMGKEEYQSYKSRKILGRLYRHIKDVYDE 1006
Query: 906 D--NSSELISAYEDLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEGEVV 733
D SSE+ D+ YDT+LE+ G+ DY+ +AW KCSYDRQL LLGQ+ V++E EVV
Sbjct: 1007 DLSESSEINLDSPDINYDTDLEVTGSADYIDDAWVKKCSYDRQLIGLLGQYKVKREEEVV 1066
Query: 732 TGHICSLGKHNSRKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYEMKA 553
TGHI S+ K+ SRK G++KE+L ++Y AL K++R+ FE M+ + +L ++ERN +YE KA
Sbjct: 1067 TGHIWSMPKYTSRKLGDLKEKLGHSYGALRKEFRQIFESMDSEIEQLNEDERNELYERKA 1126
Query: 552 SAWYQVTYHPRWVKKSIETEEPDGEMVPPRLSFAWIPADYLVRIKVKHLEKGRVGSGKPI 373
SAWYQVTYHP+WV+K +E ++ DG LSFAWI ADYL RIK++ G V KP+
Sbjct: 1127 SAWYQVTYHPKWVEKKLELQKSDGADPVVMLSFAWIAADYLARIKIRSQGTGNVDFSKPV 1186
Query: 372 DSLASYLYERI 340
+SL YL ++I
Sbjct: 1187 NSLVKYLADKI 1197
>ref|XP_010048973.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Eucalyptus grandis]
gi|629116728|gb|KCW81403.1| hypothetical protein
EUGRSUZ_C02780 [Eucalyptus grandis]
Length = 1195
Score = 1462 bits (3786), Expect = 0.0
Identities = 730/1210 (60%), Positives = 915/1210 (75%), Gaps = 2/1210 (0%)
Frame = -1
Query: 3963 MGSLGSSRDRKATVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESYP 3784
M S G+ +D TV+TQ+ GFD TA+ L LE D +IWRCRLK+S TP ESYP
Sbjct: 1 MESKGAGKD---TVVTQIGVGGFDPNVTAKELVEYLE-DTVGLIWRCRLKTSWTPPESYP 56
Query: 3783 DFDIDVADSSFPYLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLVAH 3604
DF++ +SF + E V PHAFV F P A A + + LF KPL +
Sbjct: 57 DFEV----TSFDTIQIVDEYR-KVEPHAFVHFALPEAASSAYELSQNNGLFLNNKPLKVN 111
Query: 3603 CGIDSPYRVNXXXXXXXXXXXD-VCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFDN 3427
G ++P+ +N VC EIG+LI+P EF+ AWR SSG++F +DPFD+
Sbjct: 112 LGPENPFHMNQRRRTTTPYKLPEVCLEIGTLITPEEFLVAWR---GPSSGVDFFVDPFDS 168
Query: 3426 CCKLFFSRNVAFTVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSAP 3247
C+ F+R AF+ K VI CD K+EFL+RD+ E++ + +VVL QL S P
Sbjct: 169 KCRFCFTRKTAFSFKDLSFYAVINCDFKMEFLVRDINEIKQYREMSSIVVLLQLA--SPP 226
Query: 3246 LVSYRTADDDIHESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKAL 3067
VSYRTADD++ S ++LLDDEDPWIRTTD T +GAVGRC++YR+S+ PR PKL+KA+
Sbjct: 227 HVSYRTADDNVEVSVPFDLLDDEDPWIRTTDLTASGAVGRCNTYRVSVPPRHGPKLKKAM 286
Query: 3066 HYMKERRIDGLRPERPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKGIFI 2887
Y++ERR+ P RP+ ++DE + G + FF H +EG+ F MF++NA++HK +F
Sbjct: 287 DYLRERRVQESSPRRPLKIRDEPNFGRLMEDTFFSIH-QEGIHFDIMFLLNAVIHKNVFS 345
Query: 2886 HHRLSDEFFGLLRGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKTPTP 2707
H+LS+ FF LL+ Q + +N AAL+HI YK+P+FDAY RLKLVQ WLL++ KL+K
Sbjct: 346 QHQLSERFFELLKSQPKEVNIAALKHICSYKRPVFDAYKRLKLVQEWLLKNPKLVKNQKE 405
Query: 2706 SEDNIEVRKLVITPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSNVLN 2527
D IE+R+LV+TPTKA+CLPPE+EL+NRVLR+Y+D++DRFLRVTFMDE + +N+NVLN
Sbjct: 406 LNDIIEIRRLVVTPTKAHCLPPELELSNRVLRQYKDVADRFLRVTFMDEGLETMNANVLN 465
Query: 2526 FYVAPIVKEVAKNSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWFFAE 2347
+YVAPI+K++ SFSQKT +F+RVR IM +GFYLC RKYSFLAFSSNQLR +SAWFFAE
Sbjct: 466 YYVAPILKDMKSVSFSQKTKIFKRVRMIMTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAE 525
Query: 2346 DKNISVYDITSWMGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNGYCF 2167
DK I+V I +WMGKF +NVAK ARMGQCFSSTYATVEVP EV+ +LPDI RNGYCF
Sbjct: 526 DKAINVNKIRAWMGKFNNRNVAKCTARMGQCFSSTYATVEVPRKEVHHDLPDIERNGYCF 585
Query: 2166 SDGIGKITPDLAMEVAKKLQLMENPPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKSMDK 1987
SDGIG ITPDLA EVA+KL+L N P+AYQIRYAG KGVVA WP DG+RLSLR+SM+K
Sbjct: 586 SDGIGTITPDLAREVAEKLKLELNTPAAYQIRYAGYKGVVACWPSKGDGIRLSLRRSMNK 645
Query: 1986 FHSMHRMLEIVSWTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDPDIA 1807
F S H +LEI SWTRFQPGFLNRQIVTLLSAL VPD+VF MQ+ MV+KL+Q LVD ++A
Sbjct: 646 FLSNHTILEICSWTRFQPGFLNRQIVTLLSALKVPDEVFWDMQEKMVYKLNQMLVDSEVA 705
Query: 1806 FEVLTTSCAEQGNVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKGRWL 1627
F+VLT+SCAEQGN+AA+MLSAGF+PQ+EPHL+ ML CIR +QL DL KARIFV GRWL
Sbjct: 706 FDVLTSSCAEQGNIAAIMLSAGFRPQSEPHLRGMLMCIRAAQLWDLREKARIFVPSGRWL 765
Query: 1626 MGCLDELGVLEQGQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCLHPG 1447
MGCLDE GVLEQGQCFIQ SSP+LENCF+KHG RFS TK+N++VI G V +AKNPCLHPG
Sbjct: 766 MGCLDEGGVLEQGQCFIQVSSPALENCFIKHGLRFSETKKNRQVIKGYVVVAKNPCLHPG 825
Query: 1446 DIRILEAVDVPGLHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKRSW 1267
D+RILEAVD P LHHL DC VFPQKG RPH+NEASGSDLDGDLYFVTW+E+LIPPSK+SW
Sbjct: 826 DVRILEAVDAPDLHHLYDCLVFPQKGARPHTNEASGSDLDGDLYFVTWEEDLIPPSKKSW 885
Query: 1266 MPMAYTPAEAKNEPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEKCLK 1087
PM Y AE + PR + ++D++DFFVK++ +++LG ICNAHVVHAD+SE+GA+DE C+
Sbjct: 886 TPMDYDSAEEQKLPRDVTQKDIIDFFVKHIVSESLGTICNAHVVHADRSEHGALDENCIH 945
Query: 1086 LAELAATAVDFPKTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDASDE 907
LAELAATAVDFPKTGK+V+MP LKPK YPDFM K Q+YKS KILGRLYR+IKDA DE
Sbjct: 946 LAELAATAVDFPKTGKLVTMPRHLKPKQYPDFMGKAEHQTYKSTKILGRLYRQIKDACDE 1005
Query: 906 DNSSELISAYEDLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEGEVVTG 727
D +S +S ED+PYDT LE+ GA D++ +AW+ KCSYD QL+ LLGQ+ V E E+VTG
Sbjct: 1006 DLNSSELSLPEDVPYDTSLEVPGAADFISKAWDHKCSYDGQLSGLLGQYKVNNEEELVTG 1065
Query: 726 HICSLGKHNSRKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYEMKASA 547
H+ S+ K+ SRKQGE+KE+L +Y AL K++R FE ++ D L+DEERN++YE KASA
Sbjct: 1066 HVWSMPKYASRKQGELKEKLKYSYTALRKEFREIFERLDSDSESLSDEERNLLYERKASA 1125
Query: 546 WYQVTYHPRWVKKSIE-TEEPDGEMVPPRLSFAWIPADYLVRIKVKHLEKGRVGSGKPID 370
WYQVTYHP WVKKS++ ++ DG LSFAWI D+L RIK+++ G + S KPI+
Sbjct: 1126 WYQVTYHPDWVKKSVDLRQDDDGGTSALMLSFAWIATDFLARIKIRNQRGGNLDSAKPIN 1185
Query: 369 SLASYLYERI 340
SL Y+ +RI
Sbjct: 1186 SLFEYIADRI 1195
>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
sinensis]
Length = 1197
Score = 1461 bits (3783), Expect = 0.0
Identities = 735/1202 (61%), Positives = 903/1202 (75%), Gaps = 4/1202 (0%)
Frame = -1
Query: 3933 KATVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESYPDFDIDVADSS 3754
K V QVSF GFD A L + LE + V WRCRLK+SCTPSESYPDF +
Sbjct: 8 KLLVDAQVSFGGFDRNVKAAELVKYLENEVGGV-WRCRLKTSCTPSESYPDFSVTNTAEV 66
Query: 3753 FPYLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLVAHCGIDSPYRVN 3574
+K + V PHAFV F P RA+D+AGR ELF + L G ++P+R+N
Sbjct: 67 -----RKTDDYEKVEPHAFVHFAMPTYVTRAVDAAGRTELFLNGQALKVSLGPENPFRLN 121
Query: 3573 XXXXXXXXXXXD-VCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFDNCCKLFFSRNV 3397
VC EIG+L+S EF AWR +SG +FL+DPFD CK F+R++
Sbjct: 122 QRGRTSTPFKLPDVCVEIGTLVSRDEFFVAWR---GPASGTDFLVDPFDGTCKFCFTRDI 178
Query: 3396 AFTVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSAPLVSYRTADDD 3217
AF +K + E VIKC+ K+EFL+R++ ++ + + +L QL S+P V YRTADDD
Sbjct: 179 AFALKSSTEHAVIKCEFKVEFLVREINLVKQYSEFSCVAILLQLA--SSPRVWYRTADDD 236
Query: 3216 IHESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKALHYMKERRIDG 3037
I +++LDD+DPWIRTTDFTP+GA+GRC+SYRIS+ R R KL K + Y+ ERR+
Sbjct: 237 ILVLVPFDMLDDDDPWIRTTDFTPSGAIGRCNSYRISISSRHRGKLSKVITYLGERRVQV 296
Query: 3036 LRPERPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKGIFIHHRLSDEFFG 2857
RPI +++E S+PFFC HY+EG+SF MF+VNA++HKGI H+LSD FF
Sbjct: 297 DSLSRPITIREEPDFEVPMSDPFFCIHYEEGISFEIMFLVNAVMHKGIINQHQLSDSFFD 356
Query: 2856 LLRGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKTPTPSEDNIEVRKL 2677
LLRGQS +N AAL+HIY YK P+FDA RLKLVQ WLL+ +L K P +D +EVR+L
Sbjct: 357 LLRGQSREVNVAALKHIYSYKWPVFDACKRLKLVQEWLLKDPELYKGPKQIDDIVEVRRL 416
Query: 2676 VITPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSNVLNFYVAPIVKEV 2497
VITPTKAYCLPPE+EL+NRVLRKY+D++DRFLRVTFMDE Q +N+NVL++++APIV+++
Sbjct: 417 VITPTKAYCLPPEVELSNRVLRKYKDLADRFLRVTFMDEGLQTMNANVLSYFIAPIVRDI 476
Query: 2496 AKNSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWFFAEDKNISVYDIT 2317
NSFSQKT +F+RVR+I++ GFYLC RK+SFLAFSS+QLR SAWFF+ED SV DI
Sbjct: 477 TLNSFSQKTRVFKRVRSILSGGFYLCGRKFSFLAFSSSQLRDCSAWFFSEDGKTSVLDIK 536
Query: 2316 SWMGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNGYCFSDGIGKITPD 2137
WMG+F KN+AK AARMGQCFSSTYATVEVP EV+PELPDI RNGY FSDGIGKITPD
Sbjct: 537 KWMGRFTDKNIAKCAARMGQCFSSTYATVEVPPTEVDPELPDIKRNGYVFSDGIGKITPD 596
Query: 2136 LAMEVAKKLQLMEN-PPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKSMDKFHSMHRMLE 1960
LAMEVA+KL+L N PP AYQIRYAGCKGVVA WP DG+R+SLR+SM+KF S H LE
Sbjct: 597 LAMEVAQKLKLDVNPPPCAYQIRYAGCKGVVACWPAKGDGIRMSLRESMNKFQSHHTTLE 656
Query: 1959 IVSWTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDPDIAFEVLTTSCA 1780
I SWTRFQPGFLNRQI+TLLS L+VPD++F MQDSM+ KL+Q LVD D+AFEVLT +CA
Sbjct: 657 ICSWTRFQPGFLNRQIITLLSTLNVPDEMFWSMQDSMLSKLNQMLVDSDVAFEVLTAACA 716
Query: 1779 EQGNVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKGRWLMGCLDELGV 1600
EQGN AA+MLSAGF PQTEPHL+ ML+CIR +QL L KARIFV GRWLMGCLDELGV
Sbjct: 717 EQGNTAAIMLSAGFNPQTEPHLRGMLTCIRAAQLWGLREKARIFVPAGRWLMGCLDELGV 776
Query: 1599 LEQGQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCLHPGDIRILEAVD 1420
LE GQCFIQ S P L NCF KHGSRF+ TK+ +VI G V +AKNPCLHPGDIRILEAVD
Sbjct: 777 LEGGQCFIQVSEPFLGNCFSKHGSRFAETKK-LQVIKGFVVIAKNPCLHPGDIRILEAVD 835
Query: 1419 VPGLHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKRSWMPMAYTPAE 1240
P LHHL DC VFPQKG+RPH+NEASGSDLDGDLYFVTWDENLIPPSK+SW PM Y AE
Sbjct: 836 HPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWPPMEYNAAE 895
Query: 1239 AKNEPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEKCLKLAELAATAV 1060
AK R + ++D+++FF K++ N+NLG ICNAHVVHAD SEYGA+DE C+ LAELAATAV
Sbjct: 896 AKTLTRPVDQRDIIEFFAKHMVNENLGTICNAHVVHADHSEYGALDENCILLAELAATAV 955
Query: 1059 DFPKTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDASDED--NSSELI 886
DFPKTGK+V+MPA LKPK+YPDFM K+ +QSYKS KILGRLYR+ KDA DED SSE+
Sbjct: 956 DFPKTGKIVTMPAHLKPKLYPDFMGKEAYQSYKSNKILGRLYRQSKDAYDEDISVSSEVD 1015
Query: 885 SAYEDLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEGEVVTGHICSLGK 706
D+ YDT+LE+ + D++ +AW KCSYD QLN LL Q+ V +E E+VTGHI S+ K
Sbjct: 1016 INPVDIHYDTDLEVPESVDFIADAWNQKCSYDGQLNGLLEQYKVNREEELVTGHIWSMPK 1075
Query: 705 HNSRKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYEMKASAWYQVTYH 526
+NSRKQGE+KERL ++Y AL K++R+ FE+M+ D L+++E+N ++E KASAWYQVTYH
Sbjct: 1076 YNSRKQGELKERLKHSYSALRKEFRQVFEKMDSDCELLSEDEKNALFERKASAWYQVTYH 1135
Query: 525 PRWVKKSIETEEPDGEMVPPRLSFAWIPADYLVRIKVKHLEKGRVGSGKPIDSLASYLYE 346
P WVKKS++ +E D LSFAWI DYL RIK++ E + + KP++ LA Y+ +
Sbjct: 1136 PEWVKKSLDLQEQDSARSVVLLSFAWIANDYLARIKIRCREMANIDTSKPVNYLARYVAD 1195
Query: 345 RI 340
RI
Sbjct: 1196 RI 1197
>gb|KDO61726.1| hypothetical protein CISIN_1g041430mg [Citrus sinensis]
Length = 1197
Score = 1461 bits (3781), Expect = 0.0
Identities = 735/1202 (61%), Positives = 903/1202 (75%), Gaps = 4/1202 (0%)
Frame = -1
Query: 3933 KATVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESYPDFDIDVADSS 3754
K V QVSF GFD A L + LE + V WRCRLK+SCTPSESYPDF +
Sbjct: 8 KLLVDAQVSFGGFDRNVKAAELVKYLENEVGGV-WRCRLKTSCTPSESYPDFYVTNTAEV 66
Query: 3753 FPYLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLVAHCGIDSPYRVN 3574
+K + V PHAFV F P RA+D+AGR ELF + L G ++P+R+N
Sbjct: 67 -----RKTDDYEKVEPHAFVHFAMPTYVTRAVDAAGRTELFLNGRALKVSLGPENPFRLN 121
Query: 3573 XXXXXXXXXXXD-VCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFDNCCKLFFSRNV 3397
VC EIG+L+S EF AWR +SG +FL+DPFD CK F+R++
Sbjct: 122 QRGRTSTPFKLPDVCVEIGTLVSRDEFFVAWR---GPASGTDFLVDPFDGTCKFCFTRDI 178
Query: 3396 AFTVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSAPLVSYRTADDD 3217
AF +K + E VIKC+ K+EFL+R++ ++ + + +L QL S+P V YRTADDD
Sbjct: 179 AFALKSSTEHAVIKCEFKVEFLVREINLVKQYSEFSCVAILLQLA--SSPRVWYRTADDD 236
Query: 3216 IHESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKALHYMKERRIDG 3037
I +++LDD+DPWIRTTDFTP+GA+GRC+SYRIS+ R R KL K + Y+ ERR+
Sbjct: 237 ILVLVPFDMLDDDDPWIRTTDFTPSGAIGRCNSYRISISSRHRGKLSKVITYLGERRVQV 296
Query: 3036 LRPERPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKGIFIHHRLSDEFFG 2857
RPI +++E S+PFFC HY+EG+SF MF+VNA++HKGI H+LSD FF
Sbjct: 297 DSLSRPITIREEPDFEVPMSDPFFCIHYEEGISFEIMFLVNAVMHKGIINQHQLSDSFFD 356
Query: 2856 LLRGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKTPTPSEDNIEVRKL 2677
LLRGQS +N AAL+HIY YK P+FDA RLKLVQ WLL+ +L K P +D +EVR+L
Sbjct: 357 LLRGQSREVNVAALKHIYSYKWPVFDACKRLKLVQEWLLKDPELYKGPKQIDDIVEVRRL 416
Query: 2676 VITPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSNVLNFYVAPIVKEV 2497
VITPTKAYCLPPE+EL+NRVLRKY+D++DRFLRVTFMDE Q +N+NVL++++APIV+++
Sbjct: 417 VITPTKAYCLPPEVELSNRVLRKYKDLADRFLRVTFMDEGLQTMNANVLSYFIAPIVRDI 476
Query: 2496 AKNSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWFFAEDKNISVYDIT 2317
NSFSQKT +F+RVR+I++ GFYLC RK+SFLAFSS+QLR SAWFF+ED SV DI
Sbjct: 477 TLNSFSQKTRVFKRVRSILSGGFYLCGRKFSFLAFSSSQLRDCSAWFFSEDGKTSVLDIK 536
Query: 2316 SWMGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNGYCFSDGIGKITPD 2137
WMG+F KN+AK AARMGQCFSSTYATVEVP EV+PELPDI RNGY FSDGIGKITPD
Sbjct: 537 KWMGRFTDKNIAKCAARMGQCFSSTYATVEVPPTEVDPELPDIKRNGYVFSDGIGKITPD 596
Query: 2136 LAMEVAKKLQLMEN-PPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKSMDKFHSMHRMLE 1960
LAMEVA+KL+L N PP AYQIRYAGCKGVVA WP DG+R+SLR+SM+KF S H LE
Sbjct: 597 LAMEVAQKLKLDVNPPPCAYQIRYAGCKGVVACWPAKGDGIRMSLRESMNKFQSHHTTLE 656
Query: 1959 IVSWTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDPDIAFEVLTTSCA 1780
I SWTRFQPGFLNRQI+TLLS L+VPD++F MQDSM+ KL+Q LVD D+AFEVLT +CA
Sbjct: 657 ICSWTRFQPGFLNRQIITLLSTLNVPDEMFWSMQDSMLSKLNQMLVDSDVAFEVLTAACA 716
Query: 1779 EQGNVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKGRWLMGCLDELGV 1600
EQGN AA+MLSAGF PQTEPHL+ ML+CIR +QL L KARIFV GRWLMGCLDELGV
Sbjct: 717 EQGNTAAIMLSAGFNPQTEPHLRGMLTCIRAAQLWGLREKARIFVPAGRWLMGCLDELGV 776
Query: 1599 LEQGQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCLHPGDIRILEAVD 1420
LE GQCFIQ S P L NCF KHGSRF+ TK+ +VI G V +AKNPCLHPGDIRILEAVD
Sbjct: 777 LEGGQCFIQVSEPFLGNCFSKHGSRFAETKK-LQVIKGFVVIAKNPCLHPGDIRILEAVD 835
Query: 1419 VPGLHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKRSWMPMAYTPAE 1240
P LHHL DC VFPQKG+RPH+NEASGSDLDGDLYFVTWDENLIPPSK+SW PM Y AE
Sbjct: 836 HPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWPPMEYNAAE 895
Query: 1239 AKNEPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEKCLKLAELAATAV 1060
AK R + ++D+++FF K++ N+NLG ICNAHVVHAD SEYGA+DE C+ LAELAATAV
Sbjct: 896 AKTLTRPVDQRDIIEFFAKHMVNENLGTICNAHVVHADHSEYGALDENCILLAELAATAV 955
Query: 1059 DFPKTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDASDED--NSSELI 886
DFPKTGK+V+MPA LKPK+YPDFM K+ +QSYKS KILGRLYR+ KDA DED SSE+
Sbjct: 956 DFPKTGKIVTMPAHLKPKLYPDFMGKEAYQSYKSNKILGRLYRQSKDAYDEDISVSSEVD 1015
Query: 885 SAYEDLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEGEVVTGHICSLGK 706
D+ YDT+LE+ + D++ +AW KCSYD QLN LL Q+ V +E E+VTGHI S+ K
Sbjct: 1016 INPVDIHYDTDLEVPESVDFIADAWNQKCSYDGQLNGLLEQYKVNREEELVTGHIWSMPK 1075
Query: 705 HNSRKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYEMKASAWYQVTYH 526
+NSRKQGE+KERL ++Y AL K++R+ FE+M+ D L+++E+N ++E KASAWYQVTYH
Sbjct: 1076 YNSRKQGELKERLKHSYSALRKEFRQVFEKMDSDCELLSEDEKNALFERKASAWYQVTYH 1135
Query: 525 PRWVKKSIETEEPDGEMVPPRLSFAWIPADYLVRIKVKHLEKGRVGSGKPIDSLASYLYE 346
P WVKKS++ +E D LSFAWI DYL RIK++ E + + KP++ LA Y+ +
Sbjct: 1136 PEWVKKSLDLQEQDSARSVVLLSFAWIANDYLARIKIRCREMANIDTSKPVNYLARYVAD 1195
Query: 345 RI 340
RI
Sbjct: 1196 RI 1197
>ref|XP_008394093.1| PREDICTED: RNA-dependent RNA polymerase 6 [Malus domestica]
gi|658003179|ref|XP_008394094.1| PREDICTED: RNA-dependent
RNA polymerase 6 [Malus domestica]
Length = 1197
Score = 1457 bits (3771), Expect = 0.0
Identities = 723/1207 (59%), Positives = 906/1207 (75%), Gaps = 4/1207 (0%)
Frame = -1
Query: 3948 SSRDRKATVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESYPDFD-I 3772
S +TV+TQ+SF GF A L LE + +++RCRLK+S TP ES+P+F+ I
Sbjct: 3 SEASETSTVVTQLSFGGFGRHVKASDLVTYLEDEIG-LVYRCRLKTSWTPQESFPNFELI 61
Query: 3771 DVADSSFPYLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLVAHCGID 3592
D ++ + + +V PHAFV F P A+D+AGR +LF+ +PL G +
Sbjct: 62 DPSNIA------RTNDYIMVEPHAFVHFAMPESVTFAMDAAGRSQLFYNNEPLKVSLGPE 115
Query: 3591 SPYRVNXXXXXXXXXXXD-VCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFDNCCKL 3415
+PY +N VC +IGSL+ EF AWR + G++F++DPFD CK
Sbjct: 116 NPYFLNRRRRDKTPFKLSDVCVDIGSLVRQDEFFVAWR---GPTYGVDFIVDPFDGTCKF 172
Query: 3414 FFSRNVAFTVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSAPLVSY 3235
F+R+ AF+ KG ++ VIKCD +EFL+RDV E++ D V+L L L S+P VSY
Sbjct: 173 CFTRDTAFSFKGIKKHAVIKCDFMVEFLVRDVSEIKQYTDTAYHVIL--LRLASSPWVSY 230
Query: 3234 RTADDDIHESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKALHYMK 3055
RTADDDI +S +NLLDD+DPWIRTTDFTP+GA+GRC+ YR+S+ PR KL++ + Y++
Sbjct: 231 RTADDDIDQSVPFNLLDDDDPWIRTTDFTPSGAIGRCNCYRVSIPPRHGAKLKRTMDYLR 290
Query: 3054 ERRIDGLRPERPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKGIFIHHRL 2875
E R+ + +RP V++E G +S+PFFC HYK+ +SF MF+VNA++HKGIF H+L
Sbjct: 291 EHRVREVCLKRPPKVQNEPDFGMPASDPFFCIHYKDDISFEIMFLVNAVMHKGIFNQHQL 350
Query: 2874 SDEFFGLLRGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKTPTPSEDN 2695
SD FF LLR Q + +N AAL+H+ YK P FDA RLK+VQ+WLL++ KL K P +D
Sbjct: 351 SDSFFDLLRSQPKEVNVAALKHLCTYKHPEFDACKRLKVVQDWLLKNPKLFKDPKRLDDI 410
Query: 2694 IEVRKLVITPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSNVLNFYVA 2515
EVR+L+ITPTKAYCLPPE+EL+NRVLRKY++++DRFLRVTFMDE Q +NS+VLN YVA
Sbjct: 411 SEVRRLIITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTINSHVLNSYVA 470
Query: 2514 PIVKEVAKNSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWFFAEDKNI 2335
PIVKE+ N+ QKTN+F+RV+ I+ +GFYLC RKYSFLAFSSNQL+ +SAWFFAED NI
Sbjct: 471 PIVKEIMTNASPQKTNVFKRVKTILTDGFYLCSRKYSFLAFSSNQLKDRSAWFFAEDMNI 530
Query: 2334 SVYDITSWMGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNGYCFSDGI 2155
++ DI WMGKF KN+AK AARMG CFSSTYATV+VP EVN +LPDI RN Y FSDGI
Sbjct: 531 AILDIKKWMGKFANKNIAKCAARMGLCFSSTYATVDVPLSEVNFDLPDIKRNEYDFSDGI 590
Query: 2154 GKITPDLAMEVAKKLQLMENPPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKSMDKFHSM 1975
GKITPDLAM+VA+KL+L +PP AYQIRYAGCKGVVA WP N DG RLSLR SM+KF S
Sbjct: 591 GKITPDLAMKVAEKLKLDRDPPCAYQIRYAGCKGVVACWPSNGDGYRLSLRPSMNKFKSC 650
Query: 1974 HRMLEIVSWTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDPDIAFEVL 1795
H +LEI SWTR QPGFLNRQI+TLLSALDVPD++F Q+ MV KL++ LVD D+AF+VL
Sbjct: 651 HTILEICSWTRLQPGFLNRQIITLLSALDVPDEIFWRKQERMVLKLNRMLVDTDVAFDVL 710
Query: 1794 TTSCAEQGNVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKGRWLMGCL 1615
T SCAEQGN AA+MLSAGFKPQTEPHL+ ML+CIR +QL L KARIFV GRWLMGCL
Sbjct: 711 TGSCAEQGNAAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGCL 770
Query: 1614 DELGVLEQGQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCLHPGDIRI 1435
DELGVLEQGQCF+Q S+PSL+NCF HGSRF + ++N +VI G V +AKNPCLHPGDIRI
Sbjct: 771 DELGVLEQGQCFVQVSTPSLQNCFANHGSRFDKIEKNLQVIKGLVVIAKNPCLHPGDIRI 830
Query: 1434 LEAVDVPGLHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKRSWMPMA 1255
LEAVD P L HL DC +FPQKG+RPH+NEASGSDLDGDLYFVTWDE+LIPPSK+SW PM
Sbjct: 831 LEAVDAPELRHLHDCILFPQKGDRPHTNEASGSDLDGDLYFVTWDEDLIPPSKKSWTPMM 890
Query: 1254 YTPAEAKNEPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEKCLKLAEL 1075
Y P EAK R I + D+++F KN+ N+NLG ICNAHVVHAD+S+YGAMDE CL LAE
Sbjct: 891 YDPQEAKPHGRPITQMDIINFXXKNMVNENLGAICNAHVVHADRSDYGAMDENCLLLAEY 950
Query: 1074 AATAVDFPKTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDASDEDNSS 895
AA AVDFPKTGK V++PA LKPK+YPDFM K+ Q+YKS KILGRLYR I+DA DE+ ++
Sbjct: 951 AALAVDFPKTGKTVALPAHLKPKMYPDFMGKEEHQTYKSTKILGRLYRHIRDAYDEEMAT 1010
Query: 894 ELISAYE--DLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEGEVVTGHI 721
L Y D+PYD +LEI GA D++ +AWE KCSYD Q+ L+GQ+ V++E E+VTGH+
Sbjct: 1011 SLELNYTPGDIPYDMDLEIPGATDFIADAWEKKCSYDGQVKGLMGQYKVKREEEIVTGHV 1070
Query: 720 CSLGKHNSRKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYEMKASAWY 541
S+ K NS+KQGE+KERL +Y AL K++R FE +P+ LTD+E++++YE KASAWY
Sbjct: 1071 WSIPKSNSKKQGELKERLKQSYGALKKEFRLIFENRDPNIESLTDDEKSILYEQKASAWY 1130
Query: 540 QVTYHPRWVKKSIETEEPDGEMVPPRLSFAWIPADYLVRIKVKHLEKGRVGSGKPIDSLA 361
QVTYHP+WVK+SI +EPD LSFAWI ADYL RIK+K + S KPI+SL+
Sbjct: 1131 QVTYHPKWVKRSIHLQEPDVAGNVAMLSFAWITADYLARIKIKRRGVEHIDSPKPINSLS 1190
Query: 360 SYLYERI 340
YL +R+
Sbjct: 1191 KYLADRM 1197
>ref|XP_009355733.1| PREDICTED: RNA-dependent RNA polymerase 6 [Pyrus x bretschneideri]
gi|694330031|ref|XP_009355734.1| PREDICTED: RNA-dependent
RNA polymerase 6 [Pyrus x bretschneideri]
Length = 1197
Score = 1455 bits (3767), Expect = 0.0
Identities = 722/1207 (59%), Positives = 906/1207 (75%), Gaps = 4/1207 (0%)
Frame = -1
Query: 3948 SSRDRKATVITQVSFAGFDDRTTAESLARSLEQDFHCVIWRCRLKSSCTPSESYPDFD-I 3772
S +TV+TQ+SF GF A L LE + +++RCRLK+S TP ES+P+F+ I
Sbjct: 3 SEASETSTVVTQLSFGGFGRHVKASDLVTYLEDEIG-LVYRCRLKTSWTPQESFPNFELI 61
Query: 3771 DVADSSFPYLPKKPESSFVVVPHAFVQFNTPAGAQRALDSAGRCELFHGTKPLVAHCGID 3592
D ++ + + +V PHAFV F A+D+AGR +LF+ +PL G +
Sbjct: 62 DTSNIA------RTNDYIMVEPHAFVHFAMTESVTSAMDAAGRSQLFYNNEPLKVSLGPE 115
Query: 3591 SPYRVNXXXXXXXXXXXD-VCFEIGSLISPTEFVSAWRLDPKRSSGIEFLIDPFDNCCKL 3415
+PY +N VC EIGSL+ EF AWR + G++F++D FD CK
Sbjct: 116 NPYFLNRRRRDKTPFKLSDVCVEIGSLVHQDEFFVAWR---GPAYGVDFIVDAFDGTCKF 172
Query: 3414 FFSRNVAFTVKGTREVEVIKCDLKLEFLLRDVMELRVSIDGMPLVVLFQLGLGSAPLVSY 3235
F+R++AF+ KG R+ VIKCD +EFL+RD+ E++ D V+L L L S+PLVSY
Sbjct: 173 CFTRDIAFSFKGIRKHAVIKCDFMVEFLVRDISEIKQYTDTAYHVIL--LRLASSPLVSY 230
Query: 3234 RTADDDIHESGSWNLLDDEDPWIRTTDFTPNGAVGRCSSYRISMKPRFRPKLEKALHYMK 3055
RTADDDI +S +NLLDD+DPWIRTTDFTP+GA+GRC+ YR+S+ PR KL++ + Y++
Sbjct: 231 RTADDDIDQSVPFNLLDDDDPWIRTTDFTPSGAIGRCNCYRVSIPPRHGAKLKRTMAYLR 290
Query: 3054 ERRIDGLRPERPILVKDELSSGCSSSEPFFCYHYKEGVSFANMFMVNALVHKGIFIHHRL 2875
E R+ + +RP V++E G +S+PFFC HYK+ +SF MF+VNA++HKGIF H+L
Sbjct: 291 ECRVREVCLKRPPKVQNEPDFGMPASDPFFCIHYKDDISFEIMFLVNAVMHKGIFNQHQL 350
Query: 2874 SDEFFGLLRGQSEVLNDAALRHIYGYKKPIFDAYSRLKLVQNWLLRSTKLIKTPTPSEDN 2695
SD FF LLR Q + +N AAL+H+ YK P FDA RLK+VQ+WLL++ KL K P +D
Sbjct: 351 SDSFFDLLRSQPKEVNLAALKHLCTYKHPEFDACKRLKVVQDWLLKNPKLFKDPKRLDDI 410
Query: 2694 IEVRKLVITPTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDERNQPLNSNVLNFYVA 2515
EVR+L+ITPTKAYCLPPE+EL+NRVLRKY++++DRFLRVTFMDE Q +NS+VLN YVA
Sbjct: 411 SEVRRLIITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTINSHVLNSYVA 470
Query: 2514 PIVKEVAKNSFSQKTNMFRRVRNIMNEGFYLCRRKYSFLAFSSNQLRGKSAWFFAEDKNI 2335
PIVKE+ N+ QKTN+F+RV+ I+ +GFYLC RKYSFLAFSSNQLR +SAWFFAE NI
Sbjct: 471 PIVKEIMTNASPQKTNVFKRVKTILTDGFYLCSRKYSFLAFSSNQLRDRSAWFFAEGMNI 530
Query: 2334 SVYDITSWMGKFQIKNVAKHAARMGQCFSSTYATVEVPSYEVNPELPDIYRNGYCFSDGI 2155
++ DI +WMGKF KN+AK AARMG CFSSTYATV+VP EVN LPDI + Y FSDGI
Sbjct: 531 TILDIKTWMGKFANKNIAKCAARMGLCFSSTYATVDVPLSEVNFALPDIKKGKYDFSDGI 590
Query: 2154 GKITPDLAMEVAKKLQLMENPPSAYQIRYAGCKGVVAVWPGNDDGVRLSLRKSMDKFHSM 1975
GKITPDLAM+VA+KL+L +PP AYQIRYAGCKGVVA WP N DG RLSLR SM+KF S
Sbjct: 591 GKITPDLAMKVAEKLKLDRDPPCAYQIRYAGCKGVVACWPSNGDGHRLSLRPSMNKFESC 650
Query: 1974 HRMLEIVSWTRFQPGFLNRQIVTLLSALDVPDDVFAGMQDSMVHKLDQSLVDPDIAFEVL 1795
H +LEI SWTR QPGFLNRQI+TLLSALDVPD++F MQ+ MV +L+Q LVD D+AF+VL
Sbjct: 651 HTILEICSWTRLQPGFLNRQIITLLSALDVPDEIFWRMQERMVLRLNQMLVDTDVAFDVL 710
Query: 1794 TTSCAEQGNVAAMMLSAGFKPQTEPHLKAMLSCIRLSQLKDLSSKARIFVQKGRWLMGCL 1615
T SCAEQGN AA+MLSAGFKPQTEPHL+ ML+CIR +QL L KARIFV GRWLMGCL
Sbjct: 711 TGSCAEQGNAAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGCL 770
Query: 1614 DELGVLEQGQCFIQASSPSLENCFLKHGSRFSRTKENKKVIVGTVALAKNPCLHPGDIRI 1435
DELGVLEQGQCF++ S+PSL+NCF HGSRF + + N +VI G V +AKNPCLHPGDIRI
Sbjct: 771 DELGVLEQGQCFVRVSTPSLQNCFANHGSRFDKIENNLQVIKGLVVIAKNPCLHPGDIRI 830
Query: 1434 LEAVDVPGLHHLVDCFVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKRSWMPMA 1255
LEAVD P LHHL DC +FP+KG+RPH+NEASGSDLDGDLYFVTWDE+LIPPSK+SW PM
Sbjct: 831 LEAVDAPELHHLHDCILFPRKGDRPHTNEASGSDLDGDLYFVTWDEDLIPPSKKSWTPML 890
Query: 1254 YTPAEAKNEPRKIVRQDLVDFFVKNVSNDNLGMICNAHVVHADQSEYGAMDEKCLKLAEL 1075
Y P EAK R I + D+++FF KN+ N+NLG ICNAHVVHAD+S+YGAMDE CL LAE
Sbjct: 891 YDPQEAKPHGRPITQTDIINFFAKNMVNENLGAICNAHVVHADRSDYGAMDENCLLLAEY 950
Query: 1074 AATAVDFPKTGKVVSMPASLKPKVYPDFMDKDGFQSYKSEKILGRLYRKIKDASDEDNSS 895
AA AVDFPKTGK V++PA LKPK+YPDFM K+ +Q+YKS KILGRLYR I+DA DE+ ++
Sbjct: 951 AALAVDFPKTGKTVALPAHLKPKMYPDFMGKEEYQTYKSTKILGRLYRHIRDAYDEEMAT 1010
Query: 894 ELISAYE--DLPYDTELEIQGAHDYLVEAWETKCSYDRQLNALLGQFHVEKEGEVVTGHI 721
L Y D+PYD +LEI GA D++ +AWE KCSYD Q+ L+GQ+ V++E E+VTGH+
Sbjct: 1011 SLELNYTPGDIPYDMDLEIPGATDFIADAWEKKCSYDGQVKGLMGQYKVKREEEIVTGHV 1070
Query: 720 CSLGKHNSRKQGEIKERLMNAYYALNKQYRRAFEEMNPDFLELTDEERNMIYEMKASAWY 541
S+ K NS+KQGE+KERL +Y AL K++R FE + + LTD+ER+++YE KASAWY
Sbjct: 1071 WSIPKSNSKKQGELKERLKQSYSALKKEFRLVFENRDSNIESLTDDERSILYEQKASAWY 1130
Query: 540 QVTYHPRWVKKSIETEEPDGEMVPPRLSFAWIPADYLVRIKVKHLEKGRVGSGKPIDSLA 361
QVTYHP+WVK+SI +EPD LSFAWI ADYL RIK+K + S KPI+SL+
Sbjct: 1131 QVTYHPKWVKRSIHLQEPDVAGNVALLSFAWITADYLARIKIKRRGVEHIDSSKPINSLS 1190
Query: 360 SYLYERI 340
YL +R+
Sbjct: 1191 KYLADRM 1197