BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00002006
         (3506 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010919790.1| PREDICTED: DNA repair endonuclease UVH1 isof...   827   0.0  
ref|XP_008794881.1| PREDICTED: DNA repair endonuclease UVH1 isof...   812   0.0  
ref|XP_009390470.1| PREDICTED: DNA repair endonuclease UVH1 [Mus...   780   0.0  
ref|XP_010647232.1| PREDICTED: DNA repair endonuclease UVH1 isof...   718   0.0  
ref|XP_010647230.1| PREDICTED: DNA repair endonuclease UVH1 isof...   718   0.0  
ref|XP_010274508.1| PREDICTED: DNA repair endonuclease UVH1 isof...   718   0.0  
ref|NP_001048645.1| Os03g0100400 [Oryza sativa Japonica Group] g...   718   0.0  
ref|XP_004986081.1| PREDICTED: DNA repair endonuclease UVH1 [Set...   717   0.0  
ref|XP_006649219.1| PREDICTED: DNA repair endonuclease UVH1-like...   715   0.0  
ref|XP_010274507.1| PREDICTED: DNA repair endonuclease UVH1 isof...   715   0.0  
ref|XP_009792017.1| PREDICTED: DNA repair endonuclease UVH1 [Nic...   707   0.0  
ref|XP_007039662.1| Restriction endonuclease, type II-like super...   707   0.0  
ref|XP_002466046.1| hypothetical protein SORBIDRAFT_01g050650 [S...   707   0.0  
ref|XP_012070119.1| PREDICTED: DNA repair endonuclease UVH1 isof...   706   0.0  
ref|XP_012070118.1| PREDICTED: DNA repair endonuclease UVH1 isof...   706   0.0  
ref|XP_012070117.1| PREDICTED: DNA repair endonuclease UVH1 isof...   706   0.0  
ref|XP_006440160.1| hypothetical protein CICLE_v10024418mg [Citr...   706   0.0  
emb|CBI25868.3| unnamed protein product [Vitis vinifera]              705   0.0  
ref|XP_006477073.1| PREDICTED: DNA repair endonuclease UVH1-like...   705   0.0  
ref|XP_008676498.1| PREDICTED: RAD1 DNA repair protein homolog i...   705   0.0  

>ref|XP_010919790.1| PREDICTED: DNA repair endonuclease UVH1 isoform X1 [Elaeis
            guineensis]
          Length = 1004

 Score =  827 bits (2137), Expect(2) = 0.0
 Identities = 424/593 (71%), Positives = 479/593 (80%), Gaps = 1/593 (0%)
 Frame = -3

Query: 2244 ELLEEIEEDRQKEALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGRHKVMRE 2065
            ELLEEIEE+R+KE  S   Q++VEDG  N++ VL+ACKDERSCLQLEDCI KG ++VMRE
Sbjct: 412  ELLEEIEEERRKETQSREGQLMVEDGNDNNNFVLIACKDERSCLQLEDCIFKGPNQVMRE 471

Query: 2064 EWEKYLLGKAELHSLRKRNKKRSQDPKGYGILDGVV-TGPSENTEASSISKLENDALMAA 1888
            EWEKYLLGKA+L  LRKRN+KRSQ+PKG+G+LDGVV +G SE+ E SSISKLENDAL+AA
Sbjct: 472  EWEKYLLGKAQLQGLRKRNRKRSQEPKGFGLLDGVVASGSSESAEPSSISKLENDALLAA 531

Query: 1887 ASEISNLAKEEIDFGDTSQPCXXXXXXXXXXXXXXXXXXTPRAQVYXXXXXXXXXXXXXX 1708
            ASEISNL KE ID G+ S+P                     + QV               
Sbjct: 532  ASEISNLVKEVIDVGNDSRPQTRRKGSGKGRGKRRPSKVVAKVQVSGKKSEKPAENKIVD 591

Query: 1707 XXXSDTEGRLSETDKQLGESFQTTFVPNASDGEGIVQRHEQESDATELADAKPLPPVQFY 1528
                +   +  ETD      FQ   + +ASDG+G++QRH +ES   E  DAKPLPPVQFY
Sbjct: 592  NASLEKGEQQGETDTTSSGGFQEVALKSASDGKGVLQRHREESATAEFTDAKPLPPVQFY 651

Query: 1527 ALERDQYILDVWKPSVIIVYHPDMSFVREIEVHKAENPLKKLKVYFLFYEDSTEVQKFEA 1348
            AL+ DQ+IL+VWKPSVIIVYHPDM+FVREIE++KA+N  + LKVYFLFYEDSTEVQKFEA
Sbjct: 652  ALDSDQHILEVWKPSVIIVYHPDMTFVREIEIYKADNRARNLKVYFLFYEDSTEVQKFEA 711

Query: 1347 SIQRENGAFESLIRQKSLMMIPVDQDGRCIGTTAACEPQSLTLQNSLTRKAGGRKPMEKE 1168
            SI RENGAFE+LIRQKSLMMIPVDQDGRCIG  A+ EPQS   QNS+TRKAGG KP EKE
Sbjct: 712  SIHRENGAFETLIRQKSLMMIPVDQDGRCIGPNASNEPQSTISQNSVTRKAGGVKPKEKE 771

Query: 1167 MQVIVDIREFMSSLPNVLHQKGMRVIPVTLEVGDYVLSPLICVERKSIGDLFQSFASGRL 988
            MQVIVD+REFMSSLPNVLHQKGMR+IPVTLEVGDYVLSPLICVERKSI DLFQSFASGRL
Sbjct: 772  MQVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYVLSPLICVERKSISDLFQSFASGRL 831

Query: 987  YHQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDXXXXXXXXXXXXXXLHFPRLRLI 808
            YHQVETMVRYY+IPVLLIEFSQDKSFS QSAS+IGDD              LHFPRLRL+
Sbjct: 832  YHQVETMVRYYRIPVLLIEFSQDKSFSLQSASEIGDDVSPTSIISKLSLLVLHFPRLRLV 891

Query: 807  WSRSVYATAEIFAALKANQDEPDESKAMRVGVPSEDGTVENDVRAENYNTSAIEFLRRLP 628
            WSRSV+ATAEIFA+LKANQDEPDESKA+RVGVPSEDG VE+D+RAENYNTSA+EFLRRLP
Sbjct: 892  WSRSVHATAEIFASLKANQDEPDESKAIRVGVPSEDGIVEDDIRAENYNTSAVEFLRRLP 951

Query: 627  GVTDSNYRALIDGCKNLAELALLPVERLTELMGGQKAAKMLRDFLDAKCPTML 469
            GVTDSNYRAL+DGC+NLAELALLP+ERL ELMG QKAA+ML+DFLDAKCPTML
Sbjct: 952  GVTDSNYRALMDGCRNLAELALLPIERLAELMGSQKAARMLKDFLDAKCPTML 1004



 Score =  531 bits (1369), Expect(2) = 0.0
 Identities = 282/410 (68%), Positives = 328/410 (80%), Gaps = 14/410 (3%)
 Frame = -2

Query: 3445 VLPFEEQIISDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSRGSLLILSASDSQKLNI 3266
            +LPF+EQII DL++DPNGGLVV+SSG                S+GSLLILSASDSQK  I
Sbjct: 1    MLPFQEQIILDLLEDPNGGLVVLSSGLSLPSLVASLLLLHHPSQGSLLILSASDSQKSTI 60

Query: 3265 LKALEI--HQDTLXXXXXXXA-----DLPSDLPSHHRPALYSSGCPFFLTPRILIADLLT 3107
            +++L    H D+              D+P DLPSHHR ALYSSG   F+TPRILIADLLT
Sbjct: 61   IRSLRRLHHADSTRNPNPNSDPPLPSDIPGDLPSHHRTALYSSGAALFVTPRILIADLLT 120

Query: 3106 GRVPPDSISSLLILNAHRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKAER 2927
             RVPP +++ LLILNAHRLSDTSTE+FIAR+L+SLS +A + A SD+PHAM++ FAKAER
Sbjct: 121  SRVPPSAVAGLLILNAHRLSDTSTEAFIARILRSLSRSASVRAISDRPHAMVAGFAKAER 180

Query: 2926 IMKCLFVRRLHLWPRFHVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLKEL 2747
            I+KCLF+RRLHLWPRFHV VSADLE  PP V+D+RVPMT  M+GIQTAVL AMDACLKEL
Sbjct: 181  ILKCLFIRRLHLWPRFHVQVSADLECNPPKVIDVRVPMTPAMKGIQTAVLEAMDACLKEL 240

Query: 2746 RRTNKVDVEDLTVQNGLFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLVRY 2567
            RRTNKVDVEDLTV+ GLFKSFDEIVRRQLDPIWH IGKKTKQLVSDL+TLRKLLDYLVRY
Sbjct: 241  RRTNKVDVEDLTVEKGLFKSFDEIVRRQLDPIWHTIGKKTKQLVSDLKTLRKLLDYLVRY 300

Query: 2566 DAVTYLKYLDTLRVSEGVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRIAAVGKN--NK 2393
            DAVTYLKYLDTLRVSEGVRSVW+FA+ SH+IFELAK+RVYQ VRADG++I   GK+  +K
Sbjct: 301  DAVTYLKYLDTLRVSEGVRSVWIFADSSHRIFELAKKRVYQVVRADGLKINTDGKSEPSK 360

Query: 2392 KRKANNEGEQMIKKGSETGDSSSNVLD-----PTMGVVLDEVLEEAPKWK 2258
            KR+ANN+ ++  +K +E+G S SN  D       +GVVLDEVLEEAPKWK
Sbjct: 361  KRRANNDHKR--EKQNESGASLSNEADGGRIKSNVGVVLDEVLEEAPKWK 408


>ref|XP_008794881.1| PREDICTED: DNA repair endonuclease UVH1 isoform X1 [Phoenix
            dactylifera]
          Length = 1014

 Score =  812 bits (2098), Expect(2) = 0.0
 Identities = 425/603 (70%), Positives = 481/603 (79%), Gaps = 11/603 (1%)
 Frame = -3

Query: 2244 ELLEEIEEDRQKEALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGRHKVMRE 2065
            ELLEEIEE+R+KE  S   Q++VEDG  N++ VLVACKDERSCLQLEDCI KG ++V+RE
Sbjct: 412  ELLEEIEEERRKETQSREGQLIVEDGRDNNNFVLVACKDERSCLQLEDCIFKGPNQVLRE 471

Query: 2064 EWEKYLLGKAELHSLRKRNKKRSQDPKGYGILDGVV-TGPSENTEASSISKLENDALMAA 1888
            EWEKYLLGKA+L  LRKRN+ RSQ+PKG+G+LDGVV +G SE+TE SSISKLENDAL+AA
Sbjct: 472  EWEKYLLGKAQLQGLRKRNRNRSQEPKGFGLLDGVVASGSSESTEPSSISKLENDALLAA 531

Query: 1887 ASEISNLAKEEIDFGDTSQPCXXXXXXXXXXXXXXXXXXTPRAQVYXXXXXXXXXXXXXX 1708
            ASEISNL KE ID G+ S+P                     + QV               
Sbjct: 532  ASEISNLVKEVIDVGNDSRPQTRRKGSGKGRGKGKPNKVVAKVQVSGKKSEKPVENKIVD 591

Query: 1707 XXXSDTEGRLSETD---KQLGES-------FQTTFVPNASDGEGIVQRHEQESDATELAD 1558
                +   +  ETD   K  GE+       FQ   + ++SDG+G+ +R  QES   E  D
Sbjct: 592  NASLEKGEQQGETDSVMKTQGETGAESLQGFQEVALKSSSDGKGVPRRQRQESATAEFTD 651

Query: 1557 AKPLPPVQFYALERDQYILDVWKPSVIIVYHPDMSFVREIEVHKAENPLKKLKVYFLFYE 1378
            AKPLPPVQFYAL+ DQ+IL+VWKPSVIIVYHPDM+FVREIE++KA+N  K LKVYFLFYE
Sbjct: 652  AKPLPPVQFYALDSDQHILEVWKPSVIIVYHPDMTFVREIEIYKADNQSKNLKVYFLFYE 711

Query: 1377 DSTEVQKFEASIQRENGAFESLIRQKSLMMIPVDQDGRCIGTTAACEPQSLTLQNSLTRK 1198
            DSTEVQKF+ASI+REN AFESLIRQKSLMMIPVDQDGRCIG  A+ EPQS   QNS+TRK
Sbjct: 712  DSTEVQKFDASIRRENAAFESLIRQKSLMMIPVDQDGRCIGPNASNEPQSAISQNSVTRK 771

Query: 1197 AGGRKPMEKEMQVIVDIREFMSSLPNVLHQKGMRVIPVTLEVGDYVLSPLICVERKSIGD 1018
            AGG KP EKEMQVIVD+REFMSSLPNVLHQKGM++IPVTLEVGDYVLSPLICVERKSI D
Sbjct: 772  AGGIKPKEKEMQVIVDMREFMSSLPNVLHQKGMQIIPVTLEVGDYVLSPLICVERKSISD 831

Query: 1017 LFQSFASGRLYHQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDXXXXXXXXXXXXX 838
            LFQSFASGRLYHQVETMVRYY+IPVLLIEFSQDKSFS QSAS+IGDD             
Sbjct: 832  LFQSFASGRLYHQVETMVRYYRIPVLLIEFSQDKSFSLQSASEIGDDVSPTSIISKLSLL 891

Query: 837  XLHFPRLRLIWSRSVYATAEIFAALKANQDEPDESKAMRVGVPSEDGTVENDVRAENYNT 658
             LHFPRLRL+WSRSV+ATAEIFA+LKANQDEPDESKA+RVGVPSEDG VE+DVRAENYNT
Sbjct: 892  VLHFPRLRLVWSRSVHATAEIFASLKANQDEPDESKAIRVGVPSEDGIVEDDVRAENYNT 951

Query: 657  SAIEFLRRLPGVTDSNYRALIDGCKNLAELALLPVERLTELMGGQKAAKMLRDFLDAKCP 478
            SA+EFLRRLPGVTDSNYRAL+DGC+NLAELALLPVERL ELMG QKAA+ML++FLDAKCP
Sbjct: 952  SAVEFLRRLPGVTDSNYRALMDGCRNLAELALLPVERLAELMGSQKAARMLKEFLDAKCP 1011

Query: 477  TML 469
            TML
Sbjct: 1012 TML 1014



 Score =  535 bits (1379), Expect(2) = 0.0
 Identities = 283/410 (69%), Positives = 329/410 (80%), Gaps = 14/410 (3%)
 Frame = -2

Query: 3445 VLPFEEQIISDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSRGSLLILSASDSQKLNI 3266
            +LPF+EQIISDL++DPNGGLVV+SSG                S+GSLLILSASDSQK  I
Sbjct: 1    MLPFQEQIISDLLEDPNGGLVVLSSGLSLPSLVASVLLLHHPSQGSLLILSASDSQKSAI 60

Query: 3265 LKALEI--HQDTLXXXXXXXA-----DLPSDLPSHHRPALYSSGCPFFLTPRILIADLLT 3107
            +++L    H D+              D+P DLPSHHR A+YSSG   F+TPRILIADLL 
Sbjct: 61   VRSLRRLHHADSTPNPNPNSDPPLPSDIPGDLPSHHRTAIYSSGAALFVTPRILIADLLN 120

Query: 3106 GRVPPDSISSLLILNAHRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKAER 2927
             RVPP +++ LL+LNAHRLSDTSTE+FIARV +SLS +AP+ AFSD+PHAM++ FAKAER
Sbjct: 121  SRVPPSAVAGLLVLNAHRLSDTSTEAFIARVFRSLSRSAPVRAFSDRPHAMVAGFAKAER 180

Query: 2926 IMKCLFVRRLHLWPRFHVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLKEL 2747
            I+KCLF+RRLHLWPRFHV VSADLE  PP V+D+RVPMT  M+GIQTAVL AMDACLKEL
Sbjct: 181  ILKCLFIRRLHLWPRFHVQVSADLEHNPPKVIDVRVPMTPAMKGIQTAVLEAMDACLKEL 240

Query: 2746 RRTNKVDVEDLTVQNGLFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLVRY 2567
            RRTNKVDVEDLTV+ GLFKSFDEIVRRQLDPIWH IGKKTKQLVSDL+TLRKLLDYLVRY
Sbjct: 241  RRTNKVDVEDLTVEKGLFKSFDEIVRRQLDPIWHTIGKKTKQLVSDLKTLRKLLDYLVRY 300

Query: 2566 DAVTYLKYLDTLRVSEGVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRIAAVGKN--NK 2393
            DAVTYLKYLDTLRVSEGVRSVW+FA+ SHKIFELAK+RVYQ VRADG++I+A GK+   K
Sbjct: 301  DAVTYLKYLDTLRVSEGVRSVWIFADSSHKIFELAKKRVYQVVRADGLKISADGKSAPGK 360

Query: 2392 KRKANNEGEQMIKKGSETGDSSSNVLD-----PTMGVVLDEVLEEAPKWK 2258
            KRKAN++ ++  +K  E+G + SN  D       +GVVLDEVLEEAPKWK
Sbjct: 361  KRKANDDHKR--EKQRESGAALSNETDGGRVESNVGVVLDEVLEEAPKWK 408


>ref|XP_009390470.1| PREDICTED: DNA repair endonuclease UVH1 [Musa acuminata subsp.
            malaccensis]
          Length = 992

 Score =  780 bits (2013), Expect(2) = 0.0
 Identities = 408/593 (68%), Positives = 466/593 (78%), Gaps = 1/593 (0%)
 Frame = -3

Query: 2244 ELLEEIEEDRQKEALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGRHKVMRE 2065
            ELLEEIEE+R+K+      +++ ED G  S+IVLVACKDE SC+QLEDCI +   +VMRE
Sbjct: 401  ELLEEIEEERRKDIQPIEGEMVAEDAGDLSEIVLVACKDEHSCMQLEDCISRSPQQVMRE 460

Query: 2064 EWEKYLLGKAELHSLRKRNKKRSQDPKGYGILDGVVT-GPSENTEASSISKLENDALMAA 1888
            EWEKYLLGK ELHSLRKRNKKRSQ+PKG+G+LDGVV  G S+N+E SSISK ENDAL+AA
Sbjct: 461  EWEKYLLGKVELHSLRKRNKKRSQEPKGFGVLDGVVAAGSSDNSEPSSISKYENDALLAA 520

Query: 1887 ASEISNLAKEEIDFGDTSQPCXXXXXXXXXXXXXXXXXXTPRAQVYXXXXXXXXXXXXXX 1708
            ASEI+ L+KE +D GD SQ                      + Q+               
Sbjct: 521  ASEINILSKE-VDVGDNSQSESRMKDFRKTRGKGRSRKGLSKTQLPEAKSYQIDNNDKNE 579

Query: 1707 XXXSDTEGRLSETDKQLGESFQTTFVPNASDGEGIVQRHEQESDATELADAKPLPPVQFY 1528
               S  EG  S+ +++   S+Q   + N    + ++Q H++ES    L   KPLPPVQFY
Sbjct: 580  KTSSKHEGGHSDPERKSPGSYQVNNLENICIEKDLIQGHKEESHGATLNHIKPLPPVQFY 639

Query: 1527 ALERDQYILDVWKPSVIIVYHPDMSFVREIEVHKAENPLKKLKVYFLFYEDSTEVQKFEA 1348
            AL+ DQ+ILDV  P VIIVYHPDM+FVREIEV+KAENP KKLKVYFLFYEDS EVQKFEA
Sbjct: 640  ALDSDQHILDVLNPFVIIVYHPDMTFVREIEVYKAENPSKKLKVYFLFYEDSAEVQKFEA 699

Query: 1347 SIQRENGAFESLIRQKSLMMIPVDQDGRCIGTTAACEPQSLTLQNSLTRKAGGRKPMEKE 1168
            SI+REN AFESLIRQKSLMMIPVDQ+GRCIG + +CEPQ +  QNSLTRKAGGRK  EK+
Sbjct: 700  SIRRENSAFESLIRQKSLMMIPVDQNGRCIGPSTSCEPQLVIAQNSLTRKAGGRKLQEKK 759

Query: 1167 MQVIVDIREFMSSLPNVLHQKGMRVIPVTLEVGDYVLSPLICVERKSIGDLFQSFASGRL 988
            MQVIVD+REFMSSLPNVLH KGM VIPVTLEVGDYVLSP ICVERKSI DLFQSFASGRL
Sbjct: 760  MQVIVDMREFMSSLPNVLHLKGMHVIPVTLEVGDYVLSPQICVERKSIADLFQSFASGRL 819

Query: 987  YHQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDXXXXXXXXXXXXXXLHFPRLRLI 808
            YHQVETM RYY++PVLLIEFSQDKSFSFQSASDIGDD              LHFPRLRL+
Sbjct: 820  YHQVETMSRYYRMPVLLIEFSQDKSFSFQSASDIGDDVSPTSIISKLSLLVLHFPRLRLV 879

Query: 807  WSRSVYATAEIFAALKANQDEPDESKAMRVGVPSEDGTVENDVRAENYNTSAIEFLRRLP 628
            WSR+V+ATAEIF +LK NQDEPDESKA+RVGVPSEDG VENDVRAENYNTSA+EFLRRLP
Sbjct: 880  WSRNVHATAEIFLSLKQNQDEPDESKAIRVGVPSEDGVVENDVRAENYNTSAVEFLRRLP 939

Query: 627  GVTDSNYRALIDGCKNLAELALLPVERLTELMGGQKAAKMLRDFLDAKCPTML 469
            GVTD+NYRAL+DGCKNLAELALLP+ERLTELMGGQKAA+ML++FLDAKCPT+L
Sbjct: 940  GVTDANYRALMDGCKNLAELALLPIERLTELMGGQKAARMLKEFLDAKCPTLL 992



 Score =  517 bits (1331), Expect(2) = 0.0
 Identities = 272/402 (67%), Positives = 322/402 (80%), Gaps = 6/402 (1%)
 Frame = -2

Query: 3445 VLPFEEQIISDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSRGSLLILSASDSQKLNI 3266
            +LPF+  I+SDL+DDPNGGLVV+SSG                S GSLL+LSASD+QK  I
Sbjct: 1    MLPFQGLIVSDLLDDPNGGLVVLSSGLPLPSLVASLLLLHDASAGSLLLLSASDTQKSAI 60

Query: 3265 LKALEIHQDTLXXXXXXXADLPSDLPSHHRPALYSSGCPFFLTPRILIADLLTGRVPPDS 3086
              AL  +           +D+P DLPSH+R ALY+SG   F+TPR+L+ADLLT RVPP S
Sbjct: 61   SAALRRYGQP---DLPLPSDIPGDLPSHNRTALYASGAALFVTPRVLVADLLTSRVPPSS 117

Query: 3085 ISSLLILNAHRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKAERIMKCLFV 2906
            I++L++LNAHRLSDTSTE+FIAR+L+  SP++PI AFSD+PHAM++ FAKAERIMK LFV
Sbjct: 118  IAALVVLNAHRLSDTSTEAFIARILRDHSPSSPIHAFSDRPHAMVAGFAKAERIMKSLFV 177

Query: 2905 RRLHLWPRFHVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLKELRRTNKVD 2726
            RRLHLWPRFHV VS DLE+APP VVD+RVPMT  M GIQ AVLG+MDACLKELRRTNKVD
Sbjct: 178  RRLHLWPRFHVLVSTDLERAPPEVVDVRVPMTPAMIGIQAAVLGSMDACLKELRRTNKVD 237

Query: 2725 VEDLTVQNGLFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLVRYDAVTYLK 2546
            VEDLTV+NGLFKSFDEIVRRQLDPIWH +G+KTKQLVSDL+TLRKLLDYLVRYDAVTYLK
Sbjct: 238  VEDLTVENGLFKSFDEIVRRQLDPIWHTLGRKTKQLVSDLKTLRKLLDYLVRYDAVTYLK 297

Query: 2545 YLDTLRVSEGVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRIAAVGKN-NKKRKANNEG 2369
            YLDTLRVSEGVRSVW+FA+ S+KIFELAK+RVYQ VRADG +I+   K+  +KRK N+E 
Sbjct: 298  YLDTLRVSEGVRSVWIFADSSYKIFELAKKRVYQMVRADGTKISVDTKSATRKRKVNSEN 357

Query: 2368 EQMIKKGSETGDSSS-----NVLDPTMGVVLDEVLEEAPKWK 2258
            ++  + GS TG SS+     + +D   GVVL+EVLEEAPKWK
Sbjct: 358  KK--ETGSGTGASSAIETDGSKVDTKAGVVLEEVLEEAPKWK 397


>ref|XP_010647232.1| PREDICTED: DNA repair endonuclease UVH1 isoform X3 [Vitis vinifera]
          Length = 986

 Score =  718 bits (1853), Expect(2) = 0.0
 Identities = 390/600 (65%), Positives = 458/600 (76%), Gaps = 8/600 (1%)
 Frame = -3

Query: 2244 ELLEEIEEDRQKEALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGRHKVMRE 2065
            E+L+EIEE+R+++A SS E    E    +S IVLVACKDERSC+QLED I     KVMRE
Sbjct: 391  EVLKEIEEEREQQA-SSREDASAEGDEDDSGIVLVACKDERSCMQLEDFIKSDPQKVMRE 449

Query: 2064 EWEKYLLGKAELHSLRKRNKKRSQDPKGYGILDGVVTGPS-ENTEASSISKLENDALMAA 1888
            EWEKYLL K EL  L+ R K ++++PKG+GIL+G V   S +NTE +SISKLE+DALMAA
Sbjct: 450  EWEKYLLSKVELQGLQTRKKNKAKEPKGFGILNGEVPSTSGQNTEPTSISKLEHDALMAA 509

Query: 1887 ASEISNLAKEEIDFGDTSQPCXXXXXXXXXXXXXXXXXXTPRAQVYXXXXXXXXXXXXXX 1708
            AS IS LAK++    D SQP                   T +AQV               
Sbjct: 510  ASVIS-LAKKDTAVSDNSQPHIGSGGRGKGRGKGRNIKITGKAQVSGHKVNNSNSEQGRN 568

Query: 1707 XXXS------DTEGRLSETDKQLGESFQTTFVPNASDGEGIVQRHEQESDATELADAKPL 1546
                      D++G+  E D      F       AS  +G++Q+H QE+DA   ++AK L
Sbjct: 569  DKSEVFGSENDSQGK--EIDPVSSGDFNENKDKGASVDKGVLQKHCQETDAPSFSNAKQL 626

Query: 1545 PPVQFYALERDQY-ILDVWKPSVIIVYHPDMSFVREIEVHKAENPLKKLKVYFLFYEDST 1369
            P V FYALE ++  ILDV KPS++IVYHPDM+FVREIE++K ENP KKLKVYFLFYEDST
Sbjct: 627  PLVHFYALESEKSNILDVLKPSIVIVYHPDMTFVREIEIYKTENPSKKLKVYFLFYEDST 686

Query: 1368 EVQKFEASIQRENGAFESLIRQKSLMMIPVDQDGRCIGTTAACEPQSLTLQNSLTRKAGG 1189
            EVQKFEASI+RENGAFESLIRQKSLMMIPVDQD R +G  ++ EPQ++T QNS+TRKAGG
Sbjct: 687  EVQKFEASIRRENGAFESLIRQKSLMMIPVDQDVRGLGLNSSIEPQAITSQNSITRKAGG 746

Query: 1188 RKPMEKEMQVIVDIREFMSSLPNVLHQKGMRVIPVTLEVGDYVLSPLICVERKSIGDLFQ 1009
            RK +EKE+QVIVD+REFMSSLPNVLHQKGMR+IPVTLEVGDY+LSPLICVERKSI DLF 
Sbjct: 747  RKEVEKEIQVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFG 806

Query: 1008 SFASGRLYHQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDXXXXXXXXXXXXXXLH 829
            SFASGRLYHQVETMVRYY+IPVLLIEFSQDKSFSFQSAS+IGDD              LH
Sbjct: 807  SFASGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASEIGDDVTPNSIISKLSLLVLH 866

Query: 828  FPRLRLIWSRSVYATAEIFAALKANQDEPDESKAMRVGVPSEDGTVENDVRAENYNTSAI 649
            FPRLR++WSRS++ATAEIFA+LKANQDEPDE+KA+RVGVPSE+G VENDVRAENYNTSA+
Sbjct: 867  FPRLRIVWSRSLHATAEIFASLKANQDEPDEAKAIRVGVPSEEGIVENDVRAENYNTSAV 926

Query: 648  EFLRRLPGVTDSNYRALIDGCKNLAELALLPVERLTELMGGQKAAKMLRDFLDAKCPTML 469
            E LRRLPGVTDSNYRA++DGCK+LAELALLPVE+L ELMGG KAA+ LR+FLDAK PT+L
Sbjct: 927  ELLRRLPGVTDSNYRAIMDGCKSLAELALLPVEKLAELMGGHKAARTLREFLDAKYPTLL 986



 Score =  465 bits (1196), Expect(2) = 0.0
 Identities = 244/398 (61%), Positives = 302/398 (75%), Gaps = 2/398 (0%)
 Frame = -2

Query: 3445 VLPFEEQIISDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSRGSLLILSASDSQKLNI 3266
            ++ F E II++L++D NGGLVV+SSG                S+GSLL+LS+S SQK  I
Sbjct: 1    MVQFHEHIITELLEDSNGGLVVLSSGLCLPKLISSLLLLHHPSQGSLLLLSSSPSQKQLI 60

Query: 3265 LKALEIHQDTLXXXXXXXADLPSDLPSHHRPALYSSGCPFFLTPRILIADLLTGRVPPDS 3086
            L  L+ + +         +++ +DLP+HHR +LY+SG  FF+T RILI DLLT RVP   
Sbjct: 61   LYHLDANPNP---NPNLPSEITADLPAHHRHSLYTSGSVFFITSRILIVDLLTSRVPTSG 117

Query: 3085 ISSLLILNAHRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKAERIMKCLFV 2906
            I+ L+ILNAH LS+T TE+FI R+++SL+P A + AFSDKPHAM+S FAKAERIMKCLF+
Sbjct: 118  IAGLIILNAHSLSETCTEAFIVRIIRSLNPAAYVRAFSDKPHAMVSGFAKAERIMKCLFL 177

Query: 2905 RRLHLWPRFHVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLKELRRTNKVD 2726
            RRLHLWPRF V VS +LE+ PPVVVDIRVPMT  M+GIQ A++  +DACLKE+R+TNKVD
Sbjct: 178  RRLHLWPRFQVHVSQELERCPPVVVDIRVPMTAHMQGIQKAIVEVLDACLKEMRKTNKVD 237

Query: 2725 VEDLTVQNGLFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLVRYDAVTYLK 2546
            V+DLTV+NGLFKSFDEIVRRQLDPIWH +GKKTKQLVSDL+TLRKLLDYLVRYDAV+YLK
Sbjct: 238  VDDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVSYLK 297

Query: 2545 YLDTLRVSEGVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRIAAVGKN--NKKRKANNE 2372
            YLD+LR SE +RSVW+FAE S+KIFE AK+RVY  VR+DG ++    K+  NKKRK NN 
Sbjct: 298  YLDSLRASENIRSVWIFAESSYKIFEYAKKRVYHFVRSDGGKLGGQNKSVTNKKRKLNN- 356

Query: 2371 GEQMIKKGSETGDSSSNVLDPTMGVVLDEVLEEAPKWK 2258
                  K    GDS   ++    GVVL+EVLEE+PKWK
Sbjct: 357  -----NKNEANGDSV--LVGTNGGVVLEEVLEESPKWK 387


>ref|XP_010647230.1| PREDICTED: DNA repair endonuclease UVH1 isoform X1 [Vitis vinifera]
            gi|731438510|ref|XP_010647231.1| PREDICTED: DNA repair
            endonuclease UVH1 isoform X2 [Vitis vinifera]
          Length = 986

 Score =  718 bits (1853), Expect(2) = 0.0
 Identities = 390/600 (65%), Positives = 458/600 (76%), Gaps = 8/600 (1%)
 Frame = -3

Query: 2244 ELLEEIEEDRQKEALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGRHKVMRE 2065
            E+L+EIEE+R+++A SS E    E    +S IVLVACKDERSC+QLED I     KVMRE
Sbjct: 391  EVLKEIEEEREQQA-SSREDASAEGDEDDSGIVLVACKDERSCMQLEDFIKSDPQKVMRE 449

Query: 2064 EWEKYLLGKAELHSLRKRNKKRSQDPKGYGILDGVVTGPS-ENTEASSISKLENDALMAA 1888
            EWEKYLL K EL  L+ R K ++++PKG+GIL+G V   S +NTE +SISKLE+DALMAA
Sbjct: 450  EWEKYLLSKVELQGLQTRKKNKAKEPKGFGILNGEVPSTSGQNTEPTSISKLEHDALMAA 509

Query: 1887 ASEISNLAKEEIDFGDTSQPCXXXXXXXXXXXXXXXXXXTPRAQVYXXXXXXXXXXXXXX 1708
            AS IS LAK++    D SQP                   T +AQV               
Sbjct: 510  ASVIS-LAKKDTAVSDNSQPHIGSGGRGKGRGKGRNIKITGKAQVSGHKVNNSNSEQGRN 568

Query: 1707 XXXS------DTEGRLSETDKQLGESFQTTFVPNASDGEGIVQRHEQESDATELADAKPL 1546
                      D++G+  E D      F       AS  +G++Q+H QE+DA   ++AK L
Sbjct: 569  DKSEVFGSENDSQGK--EIDPVSSGDFNENKDKGASVDKGVLQKHCQETDAPSFSNAKQL 626

Query: 1545 PPVQFYALERDQY-ILDVWKPSVIIVYHPDMSFVREIEVHKAENPLKKLKVYFLFYEDST 1369
            P V FYALE ++  ILDV KPS++IVYHPDM+FVREIE++K ENP KKLKVYFLFYEDST
Sbjct: 627  PLVHFYALESEKSNILDVLKPSIVIVYHPDMTFVREIEIYKTENPSKKLKVYFLFYEDST 686

Query: 1368 EVQKFEASIQRENGAFESLIRQKSLMMIPVDQDGRCIGTTAACEPQSLTLQNSLTRKAGG 1189
            EVQKFEASI+RENGAFESLIRQKSLMMIPVDQD R +G  ++ EPQ++T QNS+TRKAGG
Sbjct: 687  EVQKFEASIRRENGAFESLIRQKSLMMIPVDQDVRGLGLNSSIEPQAITSQNSITRKAGG 746

Query: 1188 RKPMEKEMQVIVDIREFMSSLPNVLHQKGMRVIPVTLEVGDYVLSPLICVERKSIGDLFQ 1009
            RK +EKE+QVIVD+REFMSSLPNVLHQKGMR+IPVTLEVGDY+LSPLICVERKSI DLF 
Sbjct: 747  RKEVEKEIQVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFG 806

Query: 1008 SFASGRLYHQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDXXXXXXXXXXXXXXLH 829
            SFASGRLYHQVETMVRYY+IPVLLIEFSQDKSFSFQSAS+IGDD              LH
Sbjct: 807  SFASGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASEIGDDVTPNSIISKLSLLVLH 866

Query: 828  FPRLRLIWSRSVYATAEIFAALKANQDEPDESKAMRVGVPSEDGTVENDVRAENYNTSAI 649
            FPRLR++WSRS++ATAEIFA+LKANQDEPDE+KA+RVGVPSE+G VENDVRAENYNTSA+
Sbjct: 867  FPRLRIVWSRSLHATAEIFASLKANQDEPDEAKAIRVGVPSEEGIVENDVRAENYNTSAV 926

Query: 648  EFLRRLPGVTDSNYRALIDGCKNLAELALLPVERLTELMGGQKAAKMLRDFLDAKCPTML 469
            E LRRLPGVTDSNYRA++DGCK+LAELALLPVE+L ELMGG KAA+ LR+FLDAK PT+L
Sbjct: 927  ELLRRLPGVTDSNYRAIMDGCKSLAELALLPVEKLAELMGGHKAARTLREFLDAKYPTLL 986



 Score =  466 bits (1199), Expect(2) = 0.0
 Identities = 245/398 (61%), Positives = 302/398 (75%), Gaps = 2/398 (0%)
 Frame = -2

Query: 3445 VLPFEEQIISDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSRGSLLILSASDSQKLNI 3266
            ++ F E II++L++D NGGLVV+SSG                S+GSLL+LS+S SQK  I
Sbjct: 1    MVQFHEHIITELLEDSNGGLVVLSSGLCLPKLISSLLLLHHPSQGSLLLLSSSPSQKQLI 60

Query: 3265 LKALEIHQDTLXXXXXXXADLPSDLPSHHRPALYSSGCPFFLTPRILIADLLTGRVPPDS 3086
            L  L+ + +         +++ +DLP+HHR +LY+SG  FF+T RILI DLLT RVP   
Sbjct: 61   LYHLDANPNP---NPNLPSEITADLPAHHRHSLYTSGSVFFITSRILIVDLLTSRVPTSG 117

Query: 3085 ISSLLILNAHRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKAERIMKCLFV 2906
            I+ L+ILNAH LS+T TE+FI R+++SL+P A + AFSDKPHAM+S FAKAERIMKCLF+
Sbjct: 118  IAGLIILNAHSLSETCTEAFIVRIIRSLNPAAYVRAFSDKPHAMVSGFAKAERIMKCLFL 177

Query: 2905 RRLHLWPRFHVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLKELRRTNKVD 2726
            RRLHLWPRF V VS +LE+ PPVVVDIRVPMT  M+GIQ A++  MDACLKE+R+TNKVD
Sbjct: 178  RRLHLWPRFQVHVSQELERCPPVVVDIRVPMTAHMQGIQKAIVEVMDACLKEMRKTNKVD 237

Query: 2725 VEDLTVQNGLFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLVRYDAVTYLK 2546
            V+DLTV+NGLFKSFDEIVRRQLDPIWH +GKKTKQLVSDL+TLRKLLDYLVRYDAV+YLK
Sbjct: 238  VDDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVSYLK 297

Query: 2545 YLDTLRVSEGVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRIAAVGKN--NKKRKANNE 2372
            YLD+LR SE +RSVW+FAE S+KIFE AK+RVY  VR+DG ++    K+  NKKRK NN 
Sbjct: 298  YLDSLRASENIRSVWIFAESSYKIFEYAKKRVYHFVRSDGGKLGGQNKSVTNKKRKLNN- 356

Query: 2371 GEQMIKKGSETGDSSSNVLDPTMGVVLDEVLEEAPKWK 2258
                  K    GDS   ++    GVVL+EVLEE+PKWK
Sbjct: 357  -----NKNEANGDSV--LVGTNGGVVLEEVLEESPKWK 387


>ref|XP_010274508.1| PREDICTED: DNA repair endonuclease UVH1 isoform X2 [Nelumbo nucifera]
          Length = 1003

 Score =  718 bits (1853), Expect(2) = 0.0
 Identities = 383/609 (62%), Positives = 448/609 (73%), Gaps = 17/609 (2%)
 Frame = -3

Query: 2244 ELLEEIEEDRQKEALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGRHKVMRE 2065
            E+LEEI E+RQ +ALS   +++VE G  +S +VLVACKDERSC+QLED I+KG   VMRE
Sbjct: 396  EVLEEIAEERQNQALSREGELMVE-GVEDSSLVLVACKDERSCMQLEDYIMKGPQPVMRE 454

Query: 2064 EWEKYLLGKAELHSLRKRNKKRSQDPKGYGILDGVVTGPS--------------ENTEAS 1927
            EWEKYL  K +LH L+  N+K+ ++PK +G+ DG    P               +N E +
Sbjct: 455  EWEKYLWSKVDLHGLQTHNRKKYKEPKSFGVFDGKFKEPKGFGILNGVLPSTHGQNAETA 514

Query: 1926 SISKLENDALMAAASEISNLAKEEIDFGDTSQPCXXXXXXXXXXXXXXXXXXTPRAQVYX 1747
            SISKLE DAL+AAAS +SN   E I  GD   P                      A+   
Sbjct: 515  SISKLERDALLAAASGLSNPVAENISIGDNPPPTPGVGGCGKGKVKRRGKKALVNAKSSG 574

Query: 1746 XXXXXXXXXXXXXXXXS--DTEGRLSETDKQLGESFQTTFVPNASDGEGIVQRHEQESDA 1573
                               D EG+  E D    + F           +G +++H Q  DA
Sbjct: 575  CEDDVKKREKTNRSETCISDNEGKSGENDPVEVDDFNKGEDGTLYIQKGFLRKHNQGVDA 634

Query: 1572 TELADAKPLPPVQFYALERDQY-ILDVWKPSVIIVYHPDMSFVREIEVHKAENPLKKLKV 1396
              L  AKPLPPV F+ALE +Q+ ILD  KPSVI+VYHPDM+FVREIE++KAENPL +LKV
Sbjct: 635  KGLTHAKPLPPVHFHALESEQHNILDDLKPSVIVVYHPDMAFVREIEIYKAENPLARLKV 694

Query: 1395 YFLFYEDSTEVQKFEASIQRENGAFESLIRQKSLMMIPVDQDGRCIGTTAACEPQSLTLQ 1216
            YFLFYEDSTEVQKFEASI+RENGAFESLIRQKSLM+IPVDQDGRC+G T++ E QSL  Q
Sbjct: 695  YFLFYEDSTEVQKFEASIRRENGAFESLIRQKSLMIIPVDQDGRCLGLTSSYEAQSLASQ 754

Query: 1215 NSLTRKAGGRKPMEKEMQVIVDIREFMSSLPNVLHQKGMRVIPVTLEVGDYVLSPLICVE 1036
            NS+TRKAGGRK +EK+MQVIVD+REF SSLPNVLHQ+GMR+IPVTLEVGDYVLSPLICVE
Sbjct: 755  NSVTRKAGGRKEVEKDMQVIVDMREFASSLPNVLHQRGMRIIPVTLEVGDYVLSPLICVE 814

Query: 1035 RKSIGDLFQSFASGRLYHQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDXXXXXXX 856
            RKS+ DLFQSF+SGRLYHQVETMVRYY+IPVLLIEFSQDKSFSFQSAS+IGDD       
Sbjct: 815  RKSLQDLFQSFSSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASEIGDDVSPTNII 874

Query: 855  XXXXXXXLHFPRLRLIWSRSVYATAEIFAALKANQDEPDESKAMRVGVPSEDGTVENDVR 676
                   LHFPRLR+IWSRS++ATAEIFA+LKANQDEPDESKAMRVGVP++DG VENDVR
Sbjct: 875  SKLSLLALHFPRLRIIWSRSLHATAEIFASLKANQDEPDESKAMRVGVPTDDGIVENDVR 934

Query: 675  AENYNTSAIEFLRRLPGVTDSNYRALIDGCKNLAELALLPVERLTELMGGQKAAKMLRDF 496
            AE YNTSA+EFLRR PGVTDSNYRA++DGC +LAELALLPVE+L ELMGGQKAA+ LRDF
Sbjct: 935  AETYNTSAVEFLRRFPGVTDSNYRAIMDGCNSLAELALLPVEKLAELMGGQKAARTLRDF 994

Query: 495  LDAKCPTML 469
            LDAK P+ML
Sbjct: 995  LDAKYPSML 1003



 Score =  448 bits (1152), Expect(2) = 0.0
 Identities = 235/398 (59%), Positives = 294/398 (73%), Gaps = 2/398 (0%)
 Frame = -2

Query: 3445 VLPFEEQIISDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSRGSLLILSASDSQKLNI 3266
            ++ F E IISDL++D NGGLV++SSG                S+G+LLILSAS SQK +I
Sbjct: 1    MVQFHEHIISDLLEDSNGGLVILSSGLALHKLIASLLLLHSPSQGTLLILSASPSQKSSI 60

Query: 3265 LKALEIHQDTLXXXXXXXADLPSDLPSHHRPALYSSGCPFFLTPRILIADLLTGRVPPDS 3086
             ++L+  Q+          ++ SDL +  R +LYSSG  FF+T RILI DLL  +VP  +
Sbjct: 61   TQSLQSLQNP-NPNPDLPTEITSDLSAQLRHSLYSSGSIFFITSRILIVDLLNSKVPTSN 119

Query: 3085 ISSLLILNAHRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKAERIMKCLFV 2906
            ++ L+ILNAH LS+T TE+FI R+ +SL+  A + AFSDKPHAM+S F+KAERIMKCLFV
Sbjct: 120  LAGLIILNAHNLSETCTEAFIVRIFRSLNRTAYVRAFSDKPHAMVSGFSKAERIMKCLFV 179

Query: 2905 RRLHLWPRFHVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLKELRRTNKVD 2726
            RRLHLWPRF V VS DLE+ PP VVDIRV ++  M GIQ AV+  MDACLKE+++TNKVD
Sbjct: 180  RRLHLWPRFQVYVSQDLERDPPTVVDIRVQLSPLMNGIQKAVIEVMDACLKEMQKTNKVD 239

Query: 2725 VEDLTVQNGLFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLVRYDAVTYLK 2546
            VEDLTV+ GLFKSFDEIVRRQLDPIWH +G KTKQLV DL+TLRKL+DYLVRYDAV +LK
Sbjct: 240  VEDLTVEKGLFKSFDEIVRRQLDPIWHTLGMKTKQLVWDLKTLRKLVDYLVRYDAVAFLK 299

Query: 2545 YLDTLRVSEGVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRIAAVGKN--NKKRKANNE 2372
            YLDTLRVSEGVRSVW+FA+ SHKIFE AK+RVYQ VR+DGV +A   K+  +K+RK   +
Sbjct: 300  YLDTLRVSEGVRSVWIFADSSHKIFEFAKKRVYQVVRSDGVNLAGESKSVASKRRKVKGD 359

Query: 2371 GEQMIKKGSETGDSSSNVLDPTMGVVLDEVLEEAPKWK 2258
                     ++  +S+N      G+VL+E+LEEAPKWK
Sbjct: 360  ASNEKNANGDSAGTSAN-----SGIVLEEILEEAPKWK 392


>ref|NP_001048645.1| Os03g0100400 [Oryza sativa Japonica Group]
            gi|108705675|gb|ABF93470.1| ERCC4 domain containing
            protein, expressed [Oryza sativa Japonica Group]
            gi|113547116|dbj|BAF10559.1| Os03g0100400 [Oryza sativa
            Japonica Group] gi|215696969|dbj|BAG90963.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|215768474|dbj|BAH00703.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222624006|gb|EEE58138.1|
            hypothetical protein OsJ_09049 [Oryza sativa Japonica
            Group]
          Length = 995

 Score =  718 bits (1853), Expect(2) = 0.0
 Identities = 383/594 (64%), Positives = 450/594 (75%), Gaps = 2/594 (0%)
 Frame = -3

Query: 2244 ELLEEIEEDRQKEALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGRHKVMRE 2065
            ELL+EI E++ K     +   + EDG   S IVLVACKDERSC+QL++CI KG H+VMR 
Sbjct: 409  ELLQEIAEEQAKGD-GDNVNPVHEDGINESGIVLVACKDERSCVQLQECISKGSHQVMRA 467

Query: 2064 EWEKYLLGKAELHSLRKRNKKRSQDPKGYGILDGVVTGPS-ENTEASSISKLENDALMAA 1888
            EWEKYLLGKAELH L ++NKK SQ  KG+G+LDG V   S E+    SISK+E +AL+AA
Sbjct: 468  EWEKYLLGKAELHGLHRKNKKTSQQLKGFGVLDGEVPMRSGESAGPVSISKVEANALLAA 527

Query: 1887 ASEISNLAKEEIDFGDTSQPCXXXXXXXXXXXXXXXXXXTPRAQVYXXXXXXXXXXXXXX 1708
            ASEIS + KE     D++  C                    R                  
Sbjct: 528  ASEISTVTKEANLADDSNVSCKKRSFGKGKGKGKFKKTMAKREA------SKLRNRNTTE 581

Query: 1707 XXXSDTEGRLSETDKQLG-ESFQTTFVPNASDGEGIVQRHEQESDATELADAKPLPPVQF 1531
                + EG+  +TD+Q   ++ + +   +++    + +     S   +  D +PLPPVQF
Sbjct: 582  HTDLEVEGQSGKTDEQAETDACKLSAEDDSASAPAVDKAANNLSAFGDSVDTEPLPPVQF 641

Query: 1530 YALERDQYILDVWKPSVIIVYHPDMSFVREIEVHKAENPLKKLKVYFLFYEDSTEVQKFE 1351
            YAL+ DQ++LDVWKPSVIIVYHPD++FVREIEV+KAENP  KLKVYFLFYEDS EVQKFE
Sbjct: 642  YALDSDQHVLDVWKPSVIIVYHPDITFVREIEVYKAENPSMKLKVYFLFYEDSAEVQKFE 701

Query: 1350 ASIQRENGAFESLIRQKSLMMIPVDQDGRCIGTTAACEPQSLTLQNSLTRKAGGRKPMEK 1171
            +SI+REN AFESLIRQKSLMMIPVDQ+GRCIG T A EP++L  QNSLTRKAGGRKP+EK
Sbjct: 702  SSIRRENEAFESLIRQKSLMMIPVDQNGRCIGPTLANEPEALLSQNSLTRKAGGRKPLEK 761

Query: 1170 EMQVIVDIREFMSSLPNVLHQKGMRVIPVTLEVGDYVLSPLICVERKSIGDLFQSFASGR 991
            EMQVIVD+REFMSSLPNVLHQKG+R+IPVTLEVGDYVLSPLICVERKSI DLFQSFASGR
Sbjct: 762  EMQVIVDMREFMSSLPNVLHQKGIRIIPVTLEVGDYVLSPLICVERKSIADLFQSFASGR 821

Query: 990  LYHQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDXXXXXXXXXXXXXXLHFPRLRL 811
            LY+Q+ETMVRYYKIPVLLIEFSQDKSFSFQSAS+IGDD              LHFPRLR+
Sbjct: 822  LYNQIETMVRYYKIPVLLIEFSQDKSFSFQSASEIGDDVSPTNIISKLSLLVLHFPRLRI 881

Query: 810  IWSRSVYATAEIFAALKANQDEPDESKAMRVGVPSEDGTVENDVRAENYNTSAIEFLRRL 631
            +WSRS++ATA+IF +LK NQDEPDESKAMRVGVPSEDG VENDVRAENYNTSAIEFLRRL
Sbjct: 882  VWSRSLHATADIFLSLKTNQDEPDESKAMRVGVPSEDGVVENDVRAENYNTSAIEFLRRL 941

Query: 630  PGVTDSNYRALIDGCKNLAELALLPVERLTELMGGQKAAKMLRDFLDAKCPTML 469
            PGVTDSNYR +++ C +LAELALLPVERL+ELMG QK A+ML++FLDAKCPTML
Sbjct: 942  PGVTDSNYRRIMEECNSLAELALLPVERLSELMGTQKGARMLKEFLDAKCPTML 995



 Score =  468 bits (1203), Expect(2) = 0.0
 Identities = 242/406 (59%), Positives = 302/406 (74%), Gaps = 10/406 (2%)
 Frame = -2

Query: 3445 VLPFEEQIISDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSR---GSLLILSASDSQK 3275
            +LPFEEQ+++DL++DPNGGLVVVS G                     G  LILSA +  K
Sbjct: 1    MLPFEEQVVADLLEDPNGGLVVVSCGLPVASLASAVLLQLFHQSPDDGCFLILSAPEPVK 60

Query: 3274 LNILKALEIH-QDTLXXXXXXXADLPSDLPSHHRPALYSSGCPFFLTPRILIADLLTGRV 3098
              I + L ++ Q           D+  DLP+HHR ALY+S    FL+PR L+AD LT R+
Sbjct: 61   AQIRRRLLLNSQSQPPLLQLQVHDVAPDLPAHHRVALYASRAALFLSPRALVADFLTSRL 120

Query: 3097 PPDSISSLLILNAHRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKAERIMK 2918
             P  + +LL+L+AHR SDTS+++F+AR+L+      P+ AFSD+PHAM+S FAKAER MK
Sbjct: 121  LPSRVRALLLLSAHRSSDTSSDAFVARLLRH-HHLLPVYAFSDRPHAMVSGFAKAERAMK 179

Query: 2917 CLFVRRLHLWPRFHVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLKELRRT 2738
             L++RRLHLWPRFH+  +ADLE++PP V+D+RVPMT PMRGIQ A+L AMDACLKELRRT
Sbjct: 180  SLYIRRLHLWPRFHLLAAADLERSPPEVIDVRVPMTQPMRGIQAAILDAMDACLKELRRT 239

Query: 2737 NKVDVEDLTVQNGLFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLVRYDAV 2558
            NKVDVEDLTV  GLFKSFDEIVRRQLDPIWH +GKKTKQLV+DLRTLRKLLDYLVRYDAV
Sbjct: 240  NKVDVEDLTVDKGLFKSFDEIVRRQLDPIWHTLGKKTKQLVADLRTLRKLLDYLVRYDAV 299

Query: 2557 TYLKYLDTLRVSEGVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRIAAVGKN--NKKRK 2384
            TYLKYLDTLRVSEGVRSVW+FA+ SHKIF+L+KRRVYQ VRADG ++AA  K    KKRK
Sbjct: 300  TYLKYLDTLRVSEGVRSVWIFADSSHKIFDLSKRRVYQVVRADGTKVAADNKGTPTKKRK 359

Query: 2383 ----ANNEGEQMIKKGSETGDSSSNVLDPTMGVVLDEVLEEAPKWK 2258
                ++ +G++   +GS     ++  ++  MG+V++E+LEEAPKWK
Sbjct: 360  VARASSRKGKETENEGSSDNKDNTQKVNAEMGIVVEEILEEAPKWK 405


>ref|XP_004986081.1| PREDICTED: DNA repair endonuclease UVH1 [Setaria italica]
          Length = 1027

 Score =  717 bits (1852), Expect(2) = 0.0
 Identities = 385/595 (64%), Positives = 445/595 (74%), Gaps = 3/595 (0%)
 Frame = -3

Query: 2244 ELLEEIEEDRQKEALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGRHKVMRE 2065
            ELL+EI E++ K      E    ED  G   IVLV CKDER+C QL++CI KG HKVM+E
Sbjct: 442  ELLQEIAEEQTK---GDGENAQAEDESG---IVLVTCKDERTCFQLQECISKGPHKVMQE 495

Query: 2064 EWEKYLLGKAELHSLRKRNKKRSQDPKGYGILDGVVT-GPSENTEASSISKLENDALMAA 1888
            EWEKYLLGKAELH L+K+NKK+S+ PKG+G+LDG V  GPSE+    SISKLE +AL+AA
Sbjct: 496  EWEKYLLGKAELHGLQKKNKKKSEQPKGFGVLDGEVQMGPSESAGPVSISKLETNALLAA 555

Query: 1887 ASEISNLAKEEIDFGDTSQPCXXXXXXXXXXXXXXXXXXTPRAQVYXXXXXXXXXXXXXX 1708
            ASE+ N+ KE  D  D S                     T + Q                
Sbjct: 556  ASELRNVTKEA-DVKDGSNVSCSKRRLVKEKAKGKSKKTTEKRQASNRKNKSKGGNDNDQ 614

Query: 1707 XXXSDTEGRLSETDKQ--LGESFQTTFVPNASDGEGIVQRHEQESDATELADAKPLPPVQ 1534
                + EG+  +TD+   +  S  +T    +S   G    +   SD   L +  PLPPVQ
Sbjct: 615  GTALEVEGQSGKTDEHADIDASKVSTDASVSSSTAGDACNYS--SDFRGLTNGNPLPPVQ 672

Query: 1533 FYALERDQYILDVWKPSVIIVYHPDMSFVREIEVHKAENPLKKLKVYFLFYEDSTEVQKF 1354
            F+AL+ DQ+ILDVWKPS+IIVYHPD++FVREIEV+KAENP +KLKVYFLFYEDSTEVQKF
Sbjct: 673  FHALDGDQHILDVWKPSIIIVYHPDITFVREIEVYKAENPSRKLKVYFLFYEDSTEVQKF 732

Query: 1353 EASIQRENGAFESLIRQKSLMMIPVDQDGRCIGTTAACEPQSLTLQNSLTRKAGGRKPME 1174
            E+SI+REN AFESLIRQKSLMMIPVDQDGRCIG T A EP  L  QNS+TRKAGG+K  E
Sbjct: 733  ESSIRRENEAFESLIRQKSLMMIPVDQDGRCIGPTLANEPDPLLSQNSITRKAGGKKTPE 792

Query: 1173 KEMQVIVDIREFMSSLPNVLHQKGMRVIPVTLEVGDYVLSPLICVERKSIGDLFQSFASG 994
            KEMQVIVD+REFMSSLPNVLHQKG+R++PVTLEVGDYVLSPLICVERKSI DLFQSFASG
Sbjct: 793  KEMQVIVDMREFMSSLPNVLHQKGIRIVPVTLEVGDYVLSPLICVERKSIADLFQSFASG 852

Query: 993  RLYHQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDXXXXXXXXXXXXXXLHFPRLR 814
            RLY+QV+TM RYYKIPVLLIEFSQDKSFSFQSAS+IGDD              LHFPRLR
Sbjct: 853  RLYNQVDTMARYYKIPVLLIEFSQDKSFSFQSASEIGDDVSLTNIISKLSLLVLHFPRLR 912

Query: 813  LIWSRSVYATAEIFAALKANQDEPDESKAMRVGVPSEDGTVENDVRAENYNTSAIEFLRR 634
            ++WSRS++AT EIF +LK NQDEPDE KA+RVGVPSEDG VE+DVRAENYNTSAIEFLRR
Sbjct: 913  IVWSRSLHATVEIFVSLKTNQDEPDEKKAIRVGVPSEDGIVEDDVRAENYNTSAIEFLRR 972

Query: 633  LPGVTDSNYRALIDGCKNLAELALLPVERLTELMGGQKAAKMLRDFLDAKCPTML 469
            LPGVTDSNYRA++DGC +LAELALLPVE LT LMG QK A+ L++FLDAKCPTML
Sbjct: 973  LPGVTDSNYRAIMDGCNSLAELALLPVEELTGLMGSQKGARTLKEFLDAKCPTML 1027



 Score =  465 bits (1196), Expect(2) = 0.0
 Identities = 248/411 (60%), Positives = 299/411 (72%), Gaps = 15/411 (3%)
 Frame = -2

Query: 3445 VLPFEEQIISDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSR---------GSLLILS 3293
            +L FEEQ+++DLV+DPNGGLVV+SSG                           G LL+LS
Sbjct: 37   MLAFEEQVVADLVEDPNGGLVVLSSGFPLASLAAALLLQLHLHHRPGDAAGGGGCLLVLS 96

Query: 3292 ASDSQKLNILKALEIHQDTLXXXXXXXADLPSDLPSHHRPALYSSGCPFFLTPRILIADL 3113
            A D  K  IL+ L+     L        D+P DLP+  R +LY+SG   FL+PR L ADL
Sbjct: 97   APDPLKARILRRLQDRLQVL--------DVPPDLPAQQRASLYASGAALFLSPRALAADL 148

Query: 3112 LTGRVPPDSISSLLILNAHRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKA 2933
            LT R+ P  + +LL+L+AHR SDTS++SFIAR+L+      P+ AFSD+PHAM++ F+KA
Sbjct: 149  LTSRLHPSHVRALLLLSAHRSSDTSSDSFIARLLRQRHL-LPVYAFSDRPHAMVAGFSKA 207

Query: 2932 ERIMKCLFVRRLHLWPRFHVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLK 2753
            ER MK L+VRRLHLWPRFHV  +ADLE+APP VVD+RVPMT  MRGIQ AVL AMDACLK
Sbjct: 208  ERAMKSLYVRRLHLWPRFHVLAAADLERAPPDVVDVRVPMTPAMRGIQAAVLAAMDACLK 267

Query: 2752 ELRRTNKVDVEDLTVQNGLFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLV 2573
            ELRRTNKVDVEDLTV  GLFKSFDEIVRRQLDPIWH +GKKTKQLV+DLRTLRKLLDYLV
Sbjct: 268  ELRRTNKVDVEDLTVDKGLFKSFDEIVRRQLDPIWHTLGKKTKQLVADLRTLRKLLDYLV 327

Query: 2572 RYDAVTYLKYLDTLRVSEGVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRIAA--VGKN 2399
            RYDAVTYLKYLDTLRVSEGVRSVW+ A+ SHKIFELAKRRVYQ VRADG++++    G  
Sbjct: 328  RYDAVTYLKYLDTLRVSEGVRSVWILADSSHKIFELAKRRVYQVVRADGIKVSTDKKGTP 387

Query: 2398 NKKRK----ANNEGEQMIKKGSETGDSSSNVLDPTMGVVLDEVLEEAPKWK 2258
             KKRK    + ++G++   + S     ++  ++   G+VLDEVLEEAPKWK
Sbjct: 388  TKKRKVAHNSTDKGKEYENEDSTADKHNTQKVNADAGIVLDEVLEEAPKWK 438


>ref|XP_006649219.1| PREDICTED: DNA repair endonuclease UVH1-like [Oryza brachyantha]
          Length = 987

 Score =  715 bits (1846), Expect(2) = 0.0
 Identities = 381/597 (63%), Positives = 449/597 (75%), Gaps = 5/597 (0%)
 Frame = -3

Query: 2244 ELLEEIEEDRQK----EALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGRHK 2077
            ELL+EI E++ K         HE  L E G     IVL+ACKDERSCLQL++C+ KG H+
Sbjct: 404  ELLQEIAEEQAKGDGDNVTPVHEDRLNESG-----IVLIACKDERSCLQLQECMSKGLHQ 458

Query: 2076 VMREEWEKYLLGKAELHSLRKRNKKRSQDPKGYGILDGVVTGPS-ENTEASSISKLENDA 1900
            VMR EWEKYLLGKAELH L ++NKK SQ PKG+G+LDG V   S E+    SISKLE +A
Sbjct: 459  VMRVEWEKYLLGKAELHGLHRKNKKTSQQPKGFGVLDGEVPMRSGESAGPVSISKLETNA 518

Query: 1899 LMAAASEISNLAKEEIDFGDTSQPCXXXXXXXXXXXXXXXXXXTPRAQVYXXXXXXXXXX 1720
            L+AAASEIS + KE     D++  C                    +  +           
Sbjct: 519  LLAAASEISTVTKEANRDDDSNVNCRKRGLVKGKGKF--------KKTMAKREANNLRNR 570

Query: 1719 XXXXXXXSDTEGRLSETDKQLGESFQTTFVPNASDGEGIVQRHEQESDATELADAKPLPP 1540
                    + EG+  +TD+   ++ + +   +++    + +     S   +  DAKPLP 
Sbjct: 571  NTTEHTNLEVEGQSVKTDEHEIDACKLSAEDDSASAPAVDKAVNCMSAFGDFVDAKPLPH 630

Query: 1539 VQFYALERDQYILDVWKPSVIIVYHPDMSFVREIEVHKAENPLKKLKVYFLFYEDSTEVQ 1360
            VQFYAL+ D ++LDVWKPSVIIVYHPD++FVREIEV+KAENP  KLKVYFLFYEDS EVQ
Sbjct: 631  VQFYALDSDHHVLDVWKPSVIIVYHPDITFVREIEVYKAENPSMKLKVYFLFYEDSAEVQ 690

Query: 1359 KFEASIQRENGAFESLIRQKSLMMIPVDQDGRCIGTTAACEPQSLTLQNSLTRKAGGRKP 1180
            KFE+SI+REN AFESLIRQKSLMMIPVDQ+GRCIG T A EP++L  QNS+TRKAGGRKP
Sbjct: 691  KFESSIRRENEAFESLIRQKSLMMIPVDQNGRCIGPTLANEPEALLSQNSITRKAGGRKP 750

Query: 1179 MEKEMQVIVDIREFMSSLPNVLHQKGMRVIPVTLEVGDYVLSPLICVERKSIGDLFQSFA 1000
             EKEMQVIVD+REFMSSLPNVLHQKG+R+IPVTLEVGDYVLSPLICVERKSI DLFQSFA
Sbjct: 751  PEKEMQVIVDMREFMSSLPNVLHQKGIRIIPVTLEVGDYVLSPLICVERKSIADLFQSFA 810

Query: 999  SGRLYHQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDXXXXXXXXXXXXXXLHFPR 820
            SGRLY+Q+ETMVRYYKIPVLLIEFSQDKSFSFQSAS+IGDD              LHFPR
Sbjct: 811  SGRLYNQIETMVRYYKIPVLLIEFSQDKSFSFQSASEIGDDVSPRNISSKLSLLVLHFPR 870

Query: 819  LRLIWSRSVYATAEIFAALKANQDEPDESKAMRVGVPSEDGTVENDVRAENYNTSAIEFL 640
            LR++WSRS++ATA+IF +LK NQDEPDESKAMRVGVPSEDG VENDVRAENYNTSAIEFL
Sbjct: 871  LRIVWSRSLHATADIFLSLKTNQDEPDESKAMRVGVPSEDGVVENDVRAENYNTSAIEFL 930

Query: 639  RRLPGVTDSNYRALIDGCKNLAELALLPVERLTELMGGQKAAKMLRDFLDAKCPTML 469
            RRLPGVTDSNYRA+++ C +LAE+ALLP+ERL+ELMG QK A+ML++FLDAKCPTML
Sbjct: 931  RRLPGVTDSNYRAIMEECNSLAEMALLPLERLSELMGSQKGARMLKEFLDAKCPTML 987



 Score =  462 bits (1190), Expect(2) = 0.0
 Identities = 247/407 (60%), Positives = 297/407 (72%), Gaps = 11/407 (2%)
 Frame = -2

Query: 3445 VLPFEEQIISDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSR--GSLLILSASDSQKL 3272
            +LPFEEQ+++DL++DPNGGLVV+SSG                    G  LILSA D  K 
Sbjct: 1    MLPFEEQVVADLLEDPNGGLVVLSSGLPLASLASALLLQLYHQSPGGCFLILSAPDPLKD 60

Query: 3271 NILKALEIHQDTLXXXXXXXADLPSDLPSHHRPALYSSGCPFFLTPRILIADLLTGRVPP 3092
             I + L               D+  DLP+HHR ALY+S    FL+PR L+ADLLT R+ P
Sbjct: 61   QIRRRL---LQPNSQPLLQLHDVAPDLPAHHRVALYASRAALFLSPRALVADLLTHRLLP 117

Query: 3091 DSISSLLILNAHRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKAERIMKCL 2912
              + +LL+L+AHR SDTS+++F+AR+L+      P+ AFSD+PHAM+S FAKAER MK L
Sbjct: 118  SHVHALLLLSAHRSSDTSSDAFVARLLRQ-HHLLPVYAFSDRPHAMVSGFAKAERTMKSL 176

Query: 2911 FVRRLHLWPRFHVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLKELRRTNK 2732
            ++RRLHLWPRFHV  +ADLE+APP VVD+RVPMT PMRGIQ A+L AMDACLKELRRTNK
Sbjct: 177  YIRRLHLWPRFHVLAAADLERAPPEVVDVRVPMTQPMRGIQAAILDAMDACLKELRRTNK 236

Query: 2731 VDVEDLTVQNGLFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLVRYDAVTY 2552
            VDVEDLTV  GLFKSFDEIVRRQLDPIWH +GKKTKQLV+DLRTLRKLLDYL+RYDAVTY
Sbjct: 237  VDVEDLTVDKGLFKSFDEIVRRQLDPIWHTLGKKTKQLVADLRTLRKLLDYLLRYDAVTY 296

Query: 2551 LKYLDTLRVSEGVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRIAAVGKN--NKKRKAN 2378
            LKYLDTLRVSEGVRSVW+FA+ SHKIF+L+KRRVYQ VRADG ++AA  K    KKRK  
Sbjct: 297  LKYLDTLRVSEGVRSVWIFADSSHKIFDLSKRRVYQVVRADGTKVAADSKGTPTKKRKVA 356

Query: 2377 NEGEQMIKKGSETGDSSSN-------VLDPTMGVVLDEVLEEAPKWK 2258
            +      +KG ET +  SN        +    GVV++E+LEE+PKWK
Sbjct: 357  HSSS---RKGKETENEDSNDNKDNAQKVHAETGVVVEEILEESPKWK 400


>ref|XP_010274507.1| PREDICTED: DNA repair endonuclease UVH1 isoform X1 [Nelumbo nucifera]
          Length = 1014

 Score =  715 bits (1845), Expect(2) = 0.0
 Identities = 385/620 (62%), Positives = 450/620 (72%), Gaps = 28/620 (4%)
 Frame = -3

Query: 2244 ELLEEIEEDRQKEALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGR------ 2083
            E+LEEI E+RQ +ALS   +++VE G  +S +VLVACKDERSC+QLED I+KG       
Sbjct: 396  EVLEEIAEERQNQALSREGELMVE-GVEDSSLVLVACKDERSCMQLEDYIMKGPQPVNIP 454

Query: 2082 -----HKVMREEWEKYLLGKAELHSLRKRNKKRSQDPKGYGILDGVVTGPS--------- 1945
                 HKVMREEWEKYL  K +LH L+  N+K+ ++PK +G+ DG    P          
Sbjct: 455  SNILCHKVMREEWEKYLWSKVDLHGLQTHNRKKYKEPKSFGVFDGKFKEPKGFGILNGVL 514

Query: 1944 -----ENTEASSISKLENDALMAAASEISNLAKEEIDFGDTSQPCXXXXXXXXXXXXXXX 1780
                 +N E +SISKLE DAL+AAAS +SN   E I  GD   P                
Sbjct: 515  PSTHGQNAETASISKLERDALLAAASGLSNPVAENISIGDNPPPTPGVGGCGKGKVKRRG 574

Query: 1779 XXXTPRAQVYXXXXXXXXXXXXXXXXXS--DTEGRLSETDKQLGESFQTTFVPNASDGEG 1606
                  A+                      D EG+  E D    + F           +G
Sbjct: 575  KKALVNAKSSGCEDDVKKREKTNRSETCISDNEGKSGENDPVEVDDFNKGEDGTLYIQKG 634

Query: 1605 IVQRHEQESDATELADAKPLPPVQFYALERDQY-ILDVWKPSVIIVYHPDMSFVREIEVH 1429
             +++H Q  DA  L  AKPLPPV F+ALE +Q+ ILD  KPSVI+VYHPDM+FVREIE++
Sbjct: 635  FLRKHNQGVDAKGLTHAKPLPPVHFHALESEQHNILDDLKPSVIVVYHPDMAFVREIEIY 694

Query: 1428 KAENPLKKLKVYFLFYEDSTEVQKFEASIQRENGAFESLIRQKSLMMIPVDQDGRCIGTT 1249
            KAENPL +LKVYFLFYEDSTEVQKFEASI+RENGAFESLIRQKSLM+IPVDQDGRC+G T
Sbjct: 695  KAENPLARLKVYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSLMIIPVDQDGRCLGLT 754

Query: 1248 AACEPQSLTLQNSLTRKAGGRKPMEKEMQVIVDIREFMSSLPNVLHQKGMRVIPVTLEVG 1069
            ++ E QSL  QNS+TRKAGGRK +EK+MQVIVD+REF SSLPNVLHQ+GMR+IPVTLEVG
Sbjct: 755  SSYEAQSLASQNSVTRKAGGRKEVEKDMQVIVDMREFASSLPNVLHQRGMRIIPVTLEVG 814

Query: 1068 DYVLSPLICVERKSIGDLFQSFASGRLYHQVETMVRYYKIPVLLIEFSQDKSFSFQSASD 889
            DYVLSPLICVERKS+ DLFQSF+SGRLYHQVETMVRYY+IPVLLIEFSQDKSFSFQSAS+
Sbjct: 815  DYVLSPLICVERKSLQDLFQSFSSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASE 874

Query: 888  IGDDXXXXXXXXXXXXXXLHFPRLRLIWSRSVYATAEIFAALKANQDEPDESKAMRVGVP 709
            IGDD              LHFPRLR+IWSRS++ATAEIFA+LKANQDEPDESKAMRVGVP
Sbjct: 875  IGDDVSPTNIISKLSLLALHFPRLRIIWSRSLHATAEIFASLKANQDEPDESKAMRVGVP 934

Query: 708  SEDGTVENDVRAENYNTSAIEFLRRLPGVTDSNYRALIDGCKNLAELALLPVERLTELMG 529
            ++DG VENDVRAE YNTSA+EFLRR PGVTDSNYRA++DGC +LAELALLPVE+L ELMG
Sbjct: 935  TDDGIVENDVRAETYNTSAVEFLRRFPGVTDSNYRAIMDGCNSLAELALLPVEKLAELMG 994

Query: 528  GQKAAKMLRDFLDAKCPTML 469
            GQKAA+ LRDFLDAK P+ML
Sbjct: 995  GQKAARTLRDFLDAKYPSML 1014



 Score =  448 bits (1152), Expect(2) = 0.0
 Identities = 235/398 (59%), Positives = 294/398 (73%), Gaps = 2/398 (0%)
 Frame = -2

Query: 3445 VLPFEEQIISDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSRGSLLILSASDSQKLNI 3266
            ++ F E IISDL++D NGGLV++SSG                S+G+LLILSAS SQK +I
Sbjct: 1    MVQFHEHIISDLLEDSNGGLVILSSGLALHKLIASLLLLHSPSQGTLLILSASPSQKSSI 60

Query: 3265 LKALEIHQDTLXXXXXXXADLPSDLPSHHRPALYSSGCPFFLTPRILIADLLTGRVPPDS 3086
             ++L+  Q+          ++ SDL +  R +LYSSG  FF+T RILI DLL  +VP  +
Sbjct: 61   TQSLQSLQNP-NPNPDLPTEITSDLSAQLRHSLYSSGSIFFITSRILIVDLLNSKVPTSN 119

Query: 3085 ISSLLILNAHRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKAERIMKCLFV 2906
            ++ L+ILNAH LS+T TE+FI R+ +SL+  A + AFSDKPHAM+S F+KAERIMKCLFV
Sbjct: 120  LAGLIILNAHNLSETCTEAFIVRIFRSLNRTAYVRAFSDKPHAMVSGFSKAERIMKCLFV 179

Query: 2905 RRLHLWPRFHVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLKELRRTNKVD 2726
            RRLHLWPRF V VS DLE+ PP VVDIRV ++  M GIQ AV+  MDACLKE+++TNKVD
Sbjct: 180  RRLHLWPRFQVYVSQDLERDPPTVVDIRVQLSPLMNGIQKAVIEVMDACLKEMQKTNKVD 239

Query: 2725 VEDLTVQNGLFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLVRYDAVTYLK 2546
            VEDLTV+ GLFKSFDEIVRRQLDPIWH +G KTKQLV DL+TLRKL+DYLVRYDAV +LK
Sbjct: 240  VEDLTVEKGLFKSFDEIVRRQLDPIWHTLGMKTKQLVWDLKTLRKLVDYLVRYDAVAFLK 299

Query: 2545 YLDTLRVSEGVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRIAAVGKN--NKKRKANNE 2372
            YLDTLRVSEGVRSVW+FA+ SHKIFE AK+RVYQ VR+DGV +A   K+  +K+RK   +
Sbjct: 300  YLDTLRVSEGVRSVWIFADSSHKIFEFAKKRVYQVVRSDGVNLAGESKSVASKRRKVKGD 359

Query: 2371 GEQMIKKGSETGDSSSNVLDPTMGVVLDEVLEEAPKWK 2258
                     ++  +S+N      G+VL+E+LEEAPKWK
Sbjct: 360  ASNEKNANGDSAGTSAN-----SGIVLEEILEEAPKWK 392


>ref|XP_009792017.1| PREDICTED: DNA repair endonuclease UVH1 [Nicotiana sylvestris]
          Length = 952

 Score =  707 bits (1825), Expect(2) = 0.0
 Identities = 373/592 (63%), Positives = 440/592 (74%)
 Frame = -3

Query: 2244 ELLEEIEEDRQKEALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGRHKVMRE 2065
            ++L EI+E+R K ALS  E+  +++G  N  IVLVACKDE SC+QLEDCI  G  KVMRE
Sbjct: 392  DVLMEIQEERDKRALSGEEKDHLDEGDDNG-IVLVACKDEHSCIQLEDCITNGPQKVMRE 450

Query: 2064 EWEKYLLGKAELHSLRKRNKKRSQDPKGYGILDGVVTGPSENTEASSISKLENDALMAAA 1885
            EWEKYLL K +L +L KRN K++++ KG+G+LDGVV    +  E SSISK E+DAL+AAA
Sbjct: 451  EWEKYLLSKVQLQALPKRNAKKAKELKGFGVLDGVVATAGKKAEVSSISKQEHDALLAAA 510

Query: 1884 SEISNLAKEEIDFGDTSQPCXXXXXXXXXXXXXXXXXXTPRAQVYXXXXXXXXXXXXXXX 1705
            SEIS    +     DT+                       +                   
Sbjct: 511  SEISKRINK-----DTNAEAGDQKHVDDGGFGKGKGKGKKKKS----------------S 549

Query: 1704 XXSDTEGRLSETDKQLGESFQTTFVPNASDGEGIVQRHEQESDATELADAKPLPPVQFYA 1525
                T   ++ TDK +   F           E  +++H+Q  DA   ++ K LPPV FYA
Sbjct: 550  AGEKTNNDVASTDKAMEGGFSD---------EVFLRKHDQGLDAESSSETKKLPPVVFYA 600

Query: 1524 LERDQYILDVWKPSVIIVYHPDMSFVREIEVHKAENPLKKLKVYFLFYEDSTEVQKFEAS 1345
            LE DQ ILD+ KPS II YHPD++FVRE+E++KAENPL+ +KVYFLFYEDSTEVQKFEAS
Sbjct: 601  LESDQKILDILKPSTIIAYHPDIAFVREVEIYKAENPLRNVKVYFLFYEDSTEVQKFEAS 660

Query: 1344 IQRENGAFESLIRQKSLMMIPVDQDGRCIGTTAACEPQSLTLQNSLTRKAGGRKPMEKEM 1165
            ++RENGAFESLIRQKSLMMIPVDQDGRC+G  ++ EPQS+  QN +TRKAGGR+  EKE+
Sbjct: 661  VRRENGAFESLIRQKSLMMIPVDQDGRCLGLDSSNEPQSVISQNLITRKAGGRREAEKEI 720

Query: 1164 QVIVDIREFMSSLPNVLHQKGMRVIPVTLEVGDYVLSPLICVERKSIGDLFQSFASGRLY 985
            QVIVD+REFMSSLPNVLHQKGMR+IPVTLEVGDY+LSPLICVERKSI DLF SFASGRLY
Sbjct: 721  QVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFGSFASGRLY 780

Query: 984  HQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDXXXXXXXXXXXXXXLHFPRLRLIW 805
            HQVE M RYY+IPVLLIEFSQDKSFSFQSAS+IGDD              LHFPRLR+IW
Sbjct: 781  HQVEMMSRYYRIPVLLIEFSQDKSFSFQSASEIGDDVTPNSIISKLSLLVLHFPRLRIIW 840

Query: 804  SRSVYATAEIFAALKANQDEPDESKAMRVGVPSEDGTVENDVRAENYNTSAIEFLRRLPG 625
            SRS++ATAEIFA+LKANQDEPDE KA+RVGVPSE+G +ENDVRAENYNTSA+E LRRLPG
Sbjct: 841  SRSLHATAEIFASLKANQDEPDEVKAIRVGVPSEEGVIENDVRAENYNTSAVELLRRLPG 900

Query: 624  VTDSNYRALIDGCKNLAELALLPVERLTELMGGQKAAKMLRDFLDAKCPTML 469
            VTDSNYR L+DGCK+LAELA+LP+ERL ELMGGQKAAKMLRDFLDAK PT+L
Sbjct: 901  VTDSNYRVLMDGCKSLAELAMLPMERLAELMGGQKAAKMLRDFLDAKYPTLL 952



 Score =  427 bits (1098), Expect(2) = 0.0
 Identities = 230/396 (58%), Positives = 286/396 (72%), Gaps = 3/396 (0%)
 Frame = -2

Query: 3436 FEEQIISDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSRGSLLILSASDSQKLNILKA 3257
            F+E II++L++D NGGLVV S+G                S+G LLILSA+ SQK +IL+ 
Sbjct: 4    FQEHIITELLEDSNGGLVVTSAGLGLHKIISSLFLLHHHSQGCLLILSATPSQKASILRT 63

Query: 3256 LE--IHQDTLXXXXXXXADLPSDLPSHHRPALYSSGCPFFLTPRILIADLLTGRVPPDSI 3083
             E               A++ SDLP++ R +LYSSG   F+T RILI DLLT R+P  ++
Sbjct: 64   YENVTQSQISDEVQNSPAEITSDLPANQRLSLYSSGGILFITSRILIVDLLTRRLPTTAV 123

Query: 3082 SSLLILNAHRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKAERIMKCLFVR 2903
            + L++LNAH LSDTSTE+FI R+L+S + +  + AFSD+PH+M+S FAKAER +KCLF+R
Sbjct: 124  AGLIVLNAHLLSDTSTEAFIVRILRSTNRDLYVRAFSDRPHSMVSGFAKAERTLKCLFLR 183

Query: 2902 RLHLWPRFHVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLKELRRTNKVDV 2723
            +LHLWPRF V VS DLE+ PP VVDIRVPM+  M GIQ AV+  MDACLKE+R+TNKVDV
Sbjct: 184  KLHLWPRFQVYVSQDLERDPPEVVDIRVPMSTYMIGIQKAVIEVMDACLKEMRKTNKVDV 243

Query: 2722 EDLTVQNGLFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLVRYDAVTYLKY 2543
            EDLTV+NGLFKSFDEIVRRQLDPIWH +GK+TKQLVSDL+TLRKLLDYLVRYDAV YLKY
Sbjct: 244  EDLTVENGLFKSFDEIVRRQLDPIWHTLGKRTKQLVSDLKTLRKLLDYLVRYDAVNYLKY 303

Query: 2542 LDTLRVSEGVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRIAAV-GKNNKKRKANNEGE 2366
            LD+LR SE  RSVW+FAE S+KIFE AK+RVY   R+D  ++  +   + KKRK N+   
Sbjct: 304  LDSLRASESFRSVWIFAESSYKIFEYAKKRVYHFGRSDSGKLGQIKTASTKKRKLNDN-- 361

Query: 2365 QMIKKGSETGDSSSNVLDPTMGVVLDEVLEEAPKWK 2258
               KK  +   S+ N       VVL+EVLEE PKWK
Sbjct: 362  ---KKDEDQSTSTEN------RVVLEEVLEEPPKWK 388


>ref|XP_007039662.1| Restriction endonuclease, type II-like superfamily protein [Theobroma
            cacao] gi|508776907|gb|EOY24163.1| Restriction
            endonuclease, type II-like superfamily protein [Theobroma
            cacao]
          Length = 976

 Score =  707 bits (1825), Expect(2) = 0.0
 Identities = 381/598 (63%), Positives = 449/598 (75%), Gaps = 6/598 (1%)
 Frame = -3

Query: 2244 ELLEEIEEDRQKEALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGRHKVMRE 2065
            E+LEEIEE+RQK+A  S E++L++ G  N+ IVLV CKDERSC+QLEDCI     KVMR+
Sbjct: 392  EVLEEIEEERQKQA--SSEELLLDVGEDNNGIVLVVCKDERSCMQLEDCITNSPQKVMRD 449

Query: 2064 EWEKYLLGKAELHSLR---KRNKKRSQDPKGYGILDGVVTGPS-ENTEASSISKLENDAL 1897
            EWEKYLL K EL S++   K+  K+ + PKGYGILDG+V   S +N E SS  K E++AL
Sbjct: 450  EWEKYLLSKVELRSVQTSHKKKPKKPKTPKGYGILDGIVPVTSAQNAEPSSACKQEHEAL 509

Query: 1896 MAAASEIS-NLAKEEIDFGDTSQPCXXXXXXXXXXXXXXXXXXTPRAQVYXXXXXXXXXX 1720
            +AAASE+  N  K E D  D  +P                     R +            
Sbjct: 510  LAAASELRRNQTKMENDAADDPEP-----------QVGSRGHGKGRGRGRIKKGPANTRC 558

Query: 1719 XXXXXXXSDTEGRLSETDK-QLGESFQTTFVPNASDGEGIVQRHEQESDATELADAKPLP 1543
                     TE    +  +  + E+       N + G G+ ++H    D T+  ++K LP
Sbjct: 559  SRNKDGSHSTEAATDDRPEISVSENEGHGNEINPTIGNGLFRKHIDRIDDTKTDNSKQLP 618

Query: 1542 PVQFYALERDQYILDVWKPSVIIVYHPDMSFVREIEVHKAENPLKKLKVYFLFYEDSTEV 1363
            PV F+ALERDQ ILDV KPSVIIVYHPD +FVREIEV+KAENP K+LKVYFLFYE STEV
Sbjct: 619  PVHFHALERDQPILDVLKPSVIIVYHPDTTFVREIEVYKAENPGKRLKVYFLFYEASTEV 678

Query: 1362 QKFEASIQRENGAFESLIRQKSLMMIPVDQDGRCIGTTAACEPQSLTLQNSLTRKAGGRK 1183
            QKFEASI+RENGAFESLIRQKS+MMIPVDQDG C+G+ ++ + Q  + QNS+TRKAGGRK
Sbjct: 679  QKFEASIRRENGAFESLIRQKSMMMIPVDQDGFCLGSNSSSDLQGSSSQNSITRKAGGRK 738

Query: 1182 PMEKEMQVIVDIREFMSSLPNVLHQKGMRVIPVTLEVGDYVLSPLICVERKSIGDLFQSF 1003
              EKE QV+VD+REFMSSLPNVLHQKGMR+IPVTLEVGDYVLSPLICVERKSI DLF SF
Sbjct: 739  EAEKEKQVVVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYVLSPLICVERKSIQDLFMSF 798

Query: 1002 ASGRLYHQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDXXXXXXXXXXXXXXLHFP 823
             SGRLYHQVETMVRYY+IPVLLIEFSQDKSFSFQSASDIGDD              LHFP
Sbjct: 799  TSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPNNIISKLSLLVLHFP 858

Query: 822  RLRLIWSRSVYATAEIFAALKANQDEPDESKAMRVGVPSEDGTVENDVRAENYNTSAIEF 643
            RLR++WSRS++ATAEIFA+LKANQDEPDE+KAMRVGVPSE+G +ENDVRAENYNTSA+EF
Sbjct: 859  RLRILWSRSLHATAEIFASLKANQDEPDEAKAMRVGVPSEEGFIENDVRAENYNTSAVEF 918

Query: 642  LRRLPGVTDSNYRALIDGCKNLAELALLPVERLTELMGGQKAAKMLRDFLDAKCPTML 469
            LRRLPGVTDSNYRA++DGCK+LAELALLP+E+L ELMGG+KAA+ LRDFLDAKCPT+L
Sbjct: 919  LRRLPGVTDSNYRAIMDGCKSLAELALLPMEKLAELMGGRKAAQTLRDFLDAKCPTLL 976



 Score =  426 bits (1096), Expect(2) = 0.0
 Identities = 232/399 (58%), Positives = 287/399 (71%), Gaps = 2/399 (0%)
 Frame = -2

Query: 3448 MVLPFEEQIISDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSRGSLLILSASDSQKLN 3269
            MVL F EQI+SDL+ DPNGGLV++SSG                S GSLL+L +   Q  +
Sbjct: 1    MVLKFHEQIVSDLLQDPNGGLVILSSGLSLPKLLSSFLSFHSQSNGSLLLLHSP--QFSS 58

Query: 3268 ILKALEIHQDTLXXXXXXXADLPSDLPSHHRPALYSSGCPFFLTPRILIADLLTGRVPPD 3089
             LK+L +            +++ +DLPS +R +LYSS     L+PRILI DLLT +    
Sbjct: 59   SLKSLLLSLSP----NLPLSEITADLPSSNRLSLYSSNRVLLLSPRILIVDLLTQKAQTS 114

Query: 3088 SISSLLILNAHRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKAERIMKCLF 2909
             IS ++ LN H LS++STESFI R++K+ + NA + AFSDKPH+M+S FAK ERIMK LF
Sbjct: 115  LISGVIFLNTHSLSESSTESFIVRIIKTFNKNASVYAFSDKPHSMVSGFAKTERIMKSLF 174

Query: 2908 VRRLHLWPRFHVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLKELRRTNKV 2729
            +++LHLWPRF V VS +LE+ PP VVDIRVPM+  M GIQ A++  MDACLKE+R+TNKV
Sbjct: 175  IKKLHLWPRFQVNVSEELERDPPEVVDIRVPMSKYMVGIQKAIVEVMDACLKEMRKTNKV 234

Query: 2728 DVEDLTVQNGLFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLVRYDAVTYL 2549
            DVEDLT +NGLFKSFDEIVRRQLDPIWH +GKKTKQLVSDL+TLRKLLDYLVRYDAV+YL
Sbjct: 235  DVEDLTFENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVSYL 294

Query: 2548 KYLDTLRVSEGVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRIAAVGKN--NKKRKANN 2375
            KYLDTLRVSE  RSVW+FAE S+KIF+ A++RVY   R+DG +I    KN   KKRK   
Sbjct: 295  KYLDTLRVSESFRSVWIFAESSYKIFDYARKRVYCFSRSDGTKINKPSKNVSGKKRKLKE 354

Query: 2374 EGEQMIKKGSETGDSSSNVLDPTMGVVLDEVLEEAPKWK 2258
            +G   I +G+  G SS+     + GVVL+EVLEE PKWK
Sbjct: 355  DGS--INEGAIAGTSSTGT---SNGVVLEEVLEEPPKWK 388


>ref|XP_002466046.1| hypothetical protein SORBIDRAFT_01g050650 [Sorghum bicolor]
            gi|241919900|gb|EER93044.1| hypothetical protein
            SORBIDRAFT_01g050650 [Sorghum bicolor]
          Length = 1032

 Score =  707 bits (1824), Expect(2) = 0.0
 Identities = 380/595 (63%), Positives = 441/595 (74%), Gaps = 3/595 (0%)
 Frame = -3

Query: 2244 ELLEEIEEDRQK-EALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGRHKVMR 2068
            ELL+EI E++ K +A + H+    ED      IVLV CKDER+CLQL++CILKG  +VMR
Sbjct: 443  ELLQEIAEEQMKSDAGNVHD----EDKSDEHGIVLVTCKDERTCLQLQECILKGPCQVMR 498

Query: 2067 EEWEKYLLGKAELHSLRKRNKKRSQDPKGYGILDGVVT-GPSENTEASSISKLENDALMA 1891
            EEWEKYL+GKAELH L K+NK++S+ PKG G+LDG V  G SE+    SISKLE +AL A
Sbjct: 499  EEWEKYLIGKAELHGLNKKNKRKSEQPKGVGVLDGEVQMGSSESVGPVSISKLETNALFA 558

Query: 1890 AASEISNLAKEEIDFGDTSQPCXXXXXXXXXXXXXXXXXXTPRAQVYXXXXXXXXXXXXX 1711
            AA E+ N++ E    G ++  C                    R Q               
Sbjct: 559  AACELRNISNEADVNGGSNSSCSTKGLARGKAKGKPKKTTAKR-QASNRKNKSKGGNDIR 617

Query: 1710 XXXXSDTEGRLSETDKQLGESFQTTFVPNASDGEGIVQRHEQESDATE-LADAKPLPPVQ 1534
                 D+E +  +TD+Q           +AS            S A    A+ KPLPPVQ
Sbjct: 618  QATDLDSEVQSGKTDEQAEIDASKVSAYDASVSASTSNDKFNHSSALRNSANGKPLPPVQ 677

Query: 1533 FYALERDQYILDVWKPSVIIVYHPDMSFVREIEVHKAENPLKKLKVYFLFYEDSTEVQKF 1354
            F+AL+ DQ++LDVWKPSVIIVYHPD++FVREIEV+KAEN  KKLKVYFLFYEDSTEVQKF
Sbjct: 678  FHALDSDQHVLDVWKPSVIIVYHPDITFVREIEVYKAENSSKKLKVYFLFYEDSTEVQKF 737

Query: 1353 EASIQRENGAFESLIRQKSLMMIPVDQDGRCIGTTAACEPQSLTLQNSLTRKAGGRKPME 1174
            E+SI+REN AFESLIRQKSLMMIPVDQDG CIG T A EP+ L  QNS+TRKAGG+K  E
Sbjct: 738  ESSIRRENEAFESLIRQKSLMMIPVDQDGHCIGPTVANEPEPLLCQNSITRKAGGKKAPE 797

Query: 1173 KEMQVIVDIREFMSSLPNVLHQKGMRVIPVTLEVGDYVLSPLICVERKSIGDLFQSFASG 994
            KEMQVIVD+REFMSSLPNVLHQKG+R++PVTLEVGDYVLSP ICVERKSI DLFQSFASG
Sbjct: 798  KEMQVIVDMREFMSSLPNVLHQKGIRIVPVTLEVGDYVLSPSICVERKSIADLFQSFASG 857

Query: 993  RLYHQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDXXXXXXXXXXXXXXLHFPRLR 814
            RLY+QVETM RYYKIPVLLIEFSQDKSFSFQSA++IGDD              LHFPRLR
Sbjct: 858  RLYNQVETMARYYKIPVLLIEFSQDKSFSFQSANEIGDDVSPTNIISKLSLLVLHFPRLR 917

Query: 813  LIWSRSVYATAEIFAALKANQDEPDESKAMRVGVPSEDGTVENDVRAENYNTSAIEFLRR 634
            +IWSRS++ATAEIF +LK NQDEPDE KA RVGVPSEDG VE+DVR+ENYNT AIEFLRR
Sbjct: 918  IIWSRSLHATAEIFMSLKTNQDEPDEKKATRVGVPSEDGIVEDDVRSENYNTPAIEFLRR 977

Query: 633  LPGVTDSNYRALIDGCKNLAELALLPVERLTELMGGQKAAKMLRDFLDAKCPTML 469
            LPGVTDSNYRA++DGC +LA+LALLPVERL ELMGGQKAA+ L++FLDAKCPTML
Sbjct: 978  LPGVTDSNYRAIMDGCNSLADLALLPVERLGELMGGQKAARTLKEFLDAKCPTML 1032



 Score =  459 bits (1181), Expect(2) = 0.0
 Identities = 248/411 (60%), Positives = 296/411 (72%), Gaps = 15/411 (3%)
 Frame = -2

Query: 3445 VLPFEEQIISDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSRGS------LLILSASD 3284
            +L FEEQ+++DLV+DPNGGLVV+SSG                + G       LL+LSA D
Sbjct: 41   MLAFEEQVVADLVEDPNGGLVVLSSGLPLASLAATLLLYLHQAPGDAAGGGCLLVLSAPD 100

Query: 3283 SQKLNILKALEIHQDTLXXXXXXXADLPSDLPSHHRPALYSSGCPFFLTPRILIADLLTG 3104
            S K  I + L+              D+P DL +  R +LY+SG   FL+PR L ADLLT 
Sbjct: 101  SLKARIRRRLQEKMQV--------HDVPPDLQAQQRASLYASGAALFLSPRALAADLLTS 152

Query: 3103 RVPPDSISSLLILNAHRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKAERI 2924
            R+ P  + +LL+L+AHR +DTS+++FIAR+L+  +   P+ AFSD PHAM++ F+KAER 
Sbjct: 153  RLLPSRVRALLLLSAHRSTDTSSDAFIARLLRQRNL-VPVYAFSDCPHAMVAGFSKAERT 211

Query: 2923 MKCLFVRRLHLWPRFHVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLKELR 2744
            MK L+VRRLHLWPRFHV  +ADLE+APP VVD+RVPMT PMRGIQ AVL  MDACLKELR
Sbjct: 212  MKSLYVRRLHLWPRFHVLAAADLERAPPDVVDVRVPMTPPMRGIQAAVLATMDACLKELR 271

Query: 2743 RTNKVDVEDLTVQNGLFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLVRYD 2564
            RTNKVDVEDLTV  GLFKSFDEIVRRQLDPIWH +GKKTKQLV+DLRTLRKLLDYLVRYD
Sbjct: 272  RTNKVDVEDLTVDKGLFKSFDEIVRRQLDPIWHTLGKKTKQLVADLRTLRKLLDYLVRYD 331

Query: 2563 AVTYLKYLDTLRVSEGVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRIAAVGKN--NKK 2390
            AVTYLKYLDTLRVSEGVRSVW+ A+ SHKIFELAKRRVYQAVR DG +++   K    KK
Sbjct: 332  AVTYLKYLDTLRVSEGVRSVWILADSSHKIFELAKRRVYQAVRTDGAKVSMDNKGTPTKK 391

Query: 2389 RKANNEGEQMIKKGSETGDSSSNV-------LDPTMGVVLDEVLEEAPKWK 2258
            RK         KKG ET +  S V       ++  +G+VL+EVLEEAPKWK
Sbjct: 392  RKV---AHNTTKKGKETENEDSTVGRDNTQKVNTDVGIVLEEVLEEAPKWK 439


>ref|XP_012070119.1| PREDICTED: DNA repair endonuclease UVH1 isoform X3 [Jatropha curcas]
          Length = 988

 Score =  706 bits (1822), Expect(2) = 0.0
 Identities = 380/598 (63%), Positives = 448/598 (74%), Gaps = 6/598 (1%)
 Frame = -3

Query: 2244 ELLEEIEEDRQKEALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGRHKVMRE 2065
            E+LEEIEE+RQK ALS  E  LVE GG +S IVLVACKDERSC+QLEDCI+ G  KV+RE
Sbjct: 393  EILEEIEEERQKPALS-REDDLVESGGVDSGIVLVACKDERSCMQLEDCIMNGPQKVLRE 451

Query: 2064 EWEKYLLGKAELHSLR--KRNKKRSQDPKGYGILDGVVTGPS-ENTEASSISKLENDALM 1894
            EWEKYLL K EL  L+  ++ K + ++ KG+GILDGVV   + +N E+SS +K E+DAL+
Sbjct: 452  EWEKYLLSKVELRGLQIPQKRKPKPRESKGFGILDGVVPVTAVQNAESSSTNKQEHDALL 511

Query: 1893 AAASEISNLAKEEIDFGDTSQPCXXXXXXXXXXXXXXXXXXTPRAQVYXXXXXXXXXXXX 1714
            AAASEI N  ++     D  Q                                       
Sbjct: 512  AAASEIRNQHRKVAVTEDGPQVLVNSTSQRGRGKGCNKRGRATTRNSRNKDDGVNNKVAT 571

Query: 1713 XXXXXSDT---EGRLSETDKQLGESFQTTFVPNASDGEGIVQRHEQESDATELADAKPLP 1543
                   +   E + +  D+ +  S+Q     +A   EG ++RH  +SD++  +  K +P
Sbjct: 572  SDKPEISSSEHEDQSANNDQPIEGSYQEGNSKDAYTEEGFLRRHAHQSDSSR-SKGKQIP 630

Query: 1542 PVQFYALERDQYILDVWKPSVIIVYHPDMSFVREIEVHKAENPLKKLKVYFLFYEDSTEV 1363
            PV FYA E DQ ILD+ KPSVIIVYHPDM+FVREIEV+KAEN  KKLKVYFLFYEDSTEV
Sbjct: 631  PVHFYAQESDQPILDILKPSVIIVYHPDMTFVREIEVYKAENSSKKLKVYFLFYEDSTEV 690

Query: 1362 QKFEASIQRENGAFESLIRQKSLMMIPVDQDGRCIGTTAACEPQSLTLQNSLTRKAGGRK 1183
            QKFEASI+RENGAFESLIRQKSLMMIPVDQ+  C+G     E Q  + QNS+TRKAGGRK
Sbjct: 691  QKFEASIRRENGAFESLIRQKSLMMIPVDQNANCMGLNYPMESQPSSSQNSITRKAGGRK 750

Query: 1182 PMEKEMQVIVDIREFMSSLPNVLHQKGMRVIPVTLEVGDYVLSPLICVERKSIGDLFQSF 1003
             +EKE+QVIVD+REFMSSLPNVLHQKGMR+IPVTLEVGDY+LSPLICVERKSI DLF SF
Sbjct: 751  EVEKEIQVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFMSF 810

Query: 1002 ASGRLYHQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDXXXXXXXXXXXXXXLHFP 823
             SGRLYHQVETMVRYY++PVLLIEFSQ+KSFSFQSASDIGDD              +HFP
Sbjct: 811  TSGRLYHQVETMVRYYRMPVLLIEFSQEKSFSFQSASDIGDDVTPNSIISKLSLLVMHFP 870

Query: 822  RLRLIWSRSVYATAEIFAALKANQDEPDESKAMRVGVPSEDGTVENDVRAENYNTSAIEF 643
            RLR+IWSRS++ATAEIFA+LK+NQDEPDE KA+R+GVPSE+G VE+DVRAENYNTSA+EF
Sbjct: 871  RLRIIWSRSLHATAEIFASLKSNQDEPDEVKAIRIGVPSEEGIVEDDVRAENYNTSAVEF 930

Query: 642  LRRLPGVTDSNYRALIDGCKNLAELALLPVERLTELMGGQKAAKMLRDFLDAKCPTML 469
            LRRLPGVTDSNYRA++DGCK+LAELALLP+ERLTELMGGQKAA+ LRDFLDAK PT+L
Sbjct: 931  LRRLPGVTDSNYRAIMDGCKSLAELALLPIERLTELMGGQKAARTLRDFLDAKYPTLL 988



 Score =  433 bits (1113), Expect(2) = 0.0
 Identities = 232/404 (57%), Positives = 294/404 (72%), Gaps = 8/404 (1%)
 Frame = -2

Query: 3445 VLPFEEQIISDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSRGSLLILSASDSQKLNI 3266
            ++ F E II+DL++DP GGLV++SSG                S+G+LLILS S S K  I
Sbjct: 1    MVQFHEHIITDLLEDPTGGLVILSSGLSLSKLLSSVLLLHHPSQGTLLILSPSPSLKSQI 60

Query: 3265 LKALEIHQDTLXXXXXXXADLPSDLPSHHRPALYSSGCPFFLTPRILIADLLTGRVPPDS 3086
            L  L+ HQ+          ++ +DLP+H R +LYSSG   F+T RILI DLLT R+P  S
Sbjct: 61   LHHLKSHQN-YSPENHQIVEITADLPAHCRLSLYSSGQICFVTARILIVDLLTNRIPVTS 119

Query: 3085 ISSLLILNAHRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKAERIMKCLFV 2906
            +S L++LN H LS+TSTE+FIAR++K+LS +  I AF+DKPHAM++ FAK ERIMK L++
Sbjct: 120  LSGLVLLNVHALSETSTEAFIARIIKTLSQSVYIRAFTDKPHAMVAGFAKTERIMKSLYI 179

Query: 2905 RRLHLWPRFHVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLKELRRTNKVD 2726
            ++LHLWPRF V VS +LE+  P V+D+RVPMT  M GIQ A++  MDACLKE+R+TNKVD
Sbjct: 180  KKLHLWPRFQVYVSEELERMAPEVIDVRVPMTKYMMGIQKAIIEVMDACLKEMRKTNKVD 239

Query: 2725 VEDLTVQNGLFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLVRYDAVTYLK 2546
            VEDLTV+NGLFKSFDEIVRRQLDPIWH++GKKTKQLVSDL+TLRKLLDYLVRYDAV+YLK
Sbjct: 240  VEDLTVENGLFKSFDEIVRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVSYLK 299

Query: 2545 YLDTLRVSEGVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRIAAVGKN--NKKRKANNE 2372
            YLDTLRVSE  RSVW+FAE S KIF+ AK+RVY   R++  +I  + K+   KKRK    
Sbjct: 300  YLDTLRVSESFRSVWIFAESSFKIFDYAKKRVYHLARSNNSKINGLSKSTTGKKRK---- 355

Query: 2371 GEQMIKKGSETGDSSSNVLDPTM------GVVLDEVLEEAPKWK 2258
                +K+G    D+   V+D T+      GV+L+EVLE APKWK
Sbjct: 356  ----LKRGD---DNEEAVVDDTLSTSTNSGVILEEVLEAAPKWK 392


>ref|XP_012070118.1| PREDICTED: DNA repair endonuclease UVH1 isoform X2 [Jatropha curcas]
          Length = 990

 Score =  706 bits (1822), Expect(2) = 0.0
 Identities = 380/598 (63%), Positives = 448/598 (74%), Gaps = 6/598 (1%)
 Frame = -3

Query: 2244 ELLEEIEEDRQKEALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGRHKVMRE 2065
            E+LEEIEE+RQK ALS  E  LVE GG +S IVLVACKDERSC+QLEDCI+ G  KV+RE
Sbjct: 395  EILEEIEEERQKPALS-REDDLVESGGVDSGIVLVACKDERSCMQLEDCIMNGPQKVLRE 453

Query: 2064 EWEKYLLGKAELHSLR--KRNKKRSQDPKGYGILDGVVTGPS-ENTEASSISKLENDALM 1894
            EWEKYLL K EL  L+  ++ K + ++ KG+GILDGVV   + +N E+SS +K E+DAL+
Sbjct: 454  EWEKYLLSKVELRGLQIPQKRKPKPRESKGFGILDGVVPVTAVQNAESSSTNKQEHDALL 513

Query: 1893 AAASEISNLAKEEIDFGDTSQPCXXXXXXXXXXXXXXXXXXTPRAQVYXXXXXXXXXXXX 1714
            AAASEI N  ++     D  Q                                       
Sbjct: 514  AAASEIRNQHRKVAVTEDGPQVLVNSTSQRGRGKGCNKRGRATTRNSRNKDDGVNNKVAT 573

Query: 1713 XXXXXSDT---EGRLSETDKQLGESFQTTFVPNASDGEGIVQRHEQESDATELADAKPLP 1543
                   +   E + +  D+ +  S+Q     +A   EG ++RH  +SD++  +  K +P
Sbjct: 574  SDKPEISSSEHEDQSANNDQPIEGSYQEGNSKDAYTEEGFLRRHAHQSDSSR-SKGKQIP 632

Query: 1542 PVQFYALERDQYILDVWKPSVIIVYHPDMSFVREIEVHKAENPLKKLKVYFLFYEDSTEV 1363
            PV FYA E DQ ILD+ KPSVIIVYHPDM+FVREIEV+KAEN  KKLKVYFLFYEDSTEV
Sbjct: 633  PVHFYAQESDQPILDILKPSVIIVYHPDMTFVREIEVYKAENSSKKLKVYFLFYEDSTEV 692

Query: 1362 QKFEASIQRENGAFESLIRQKSLMMIPVDQDGRCIGTTAACEPQSLTLQNSLTRKAGGRK 1183
            QKFEASI+RENGAFESLIRQKSLMMIPVDQ+  C+G     E Q  + QNS+TRKAGGRK
Sbjct: 693  QKFEASIRRENGAFESLIRQKSLMMIPVDQNANCMGLNYPMESQPSSSQNSITRKAGGRK 752

Query: 1182 PMEKEMQVIVDIREFMSSLPNVLHQKGMRVIPVTLEVGDYVLSPLICVERKSIGDLFQSF 1003
             +EKE+QVIVD+REFMSSLPNVLHQKGMR+IPVTLEVGDY+LSPLICVERKSI DLF SF
Sbjct: 753  EVEKEIQVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFMSF 812

Query: 1002 ASGRLYHQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDXXXXXXXXXXXXXXLHFP 823
             SGRLYHQVETMVRYY++PVLLIEFSQ+KSFSFQSASDIGDD              +HFP
Sbjct: 813  TSGRLYHQVETMVRYYRMPVLLIEFSQEKSFSFQSASDIGDDVTPNSIISKLSLLVMHFP 872

Query: 822  RLRLIWSRSVYATAEIFAALKANQDEPDESKAMRVGVPSEDGTVENDVRAENYNTSAIEF 643
            RLR+IWSRS++ATAEIFA+LK+NQDEPDE KA+R+GVPSE+G VE+DVRAENYNTSA+EF
Sbjct: 873  RLRIIWSRSLHATAEIFASLKSNQDEPDEVKAIRIGVPSEEGIVEDDVRAENYNTSAVEF 932

Query: 642  LRRLPGVTDSNYRALIDGCKNLAELALLPVERLTELMGGQKAAKMLRDFLDAKCPTML 469
            LRRLPGVTDSNYRA++DGCK+LAELALLP+ERLTELMGGQKAA+ LRDFLDAK PT+L
Sbjct: 933  LRRLPGVTDSNYRAIMDGCKSLAELALLPIERLTELMGGQKAARTLRDFLDAKYPTLL 990



 Score =  433 bits (1114), Expect(2) = 0.0
 Identities = 229/400 (57%), Positives = 293/400 (73%), Gaps = 4/400 (1%)
 Frame = -2

Query: 3445 VLPFEEQIISDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSRGSLLILSASDSQKLNI 3266
            ++ F E II+DL++DP GGLV++SSG                S+G+LLILS S S K  I
Sbjct: 1    MVQFHEHIITDLLEDPTGGLVILSSGLSLSKLLSSVLLLHHPSQGTLLILSPSPSLKSQI 60

Query: 3265 LKALEIHQDTLXXXXXXXADLPSDLPSHHRPALYSSGCPFFLTPRILIADLLTGRVPPDS 3086
            L  L+ HQ+          ++ +DLP+H R +LYSSG   F+T RILI DLLT R+P  S
Sbjct: 61   LHHLKSHQN-YSPENHQIVEITADLPAHCRLSLYSSGQICFVTARILIVDLLTNRIPVTS 119

Query: 3085 ISSLLILNAHRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKAERIMKCLFV 2906
            +S L++LN H LS+TSTE+FIAR++K+LS +  I AF+DKPHAM++ FAK ERIMK L++
Sbjct: 120  LSGLVLLNVHALSETSTEAFIARIIKTLSQSVYIRAFTDKPHAMVAGFAKTERIMKSLYI 179

Query: 2905 RRLHLWPRFHVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLKELRRTNKVD 2726
            ++LHLWPRF V VS +LE+  P V+D+RVPMT  M GIQ A++  MDACLKE+R+TNKVD
Sbjct: 180  KKLHLWPRFQVYVSEELERMAPEVIDVRVPMTKYMMGIQKAIIEVMDACLKEMRKTNKVD 239

Query: 2725 VEDLTVQNGLFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLVRYDAVTYLK 2546
            VEDLTV+NGLFKSFDEIVRRQLDPIWH++GKKTKQLVSDL+TLRKLLDYLVRYDAV+YLK
Sbjct: 240  VEDLTVENGLFKSFDEIVRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVSYLK 299

Query: 2545 YLDTLRVSEGVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRIAAVGKN--NKKRKANNE 2372
            YLDTLRVSE  RSVW+FAE S KIF+ AK+RVY   R++  +I  + K+   KKRK    
Sbjct: 300  YLDTLRVSESFRSVWIFAESSFKIFDYAKKRVYHLARSNNSKINGLSKSTTGKKRK---- 355

Query: 2371 GEQMIKKGSETGDSSSNVLDPT--MGVVLDEVLEEAPKWK 2258
                +K+G +  ++  + L  +   GV+L+EVLE APKWK
Sbjct: 356  ----LKRGDDNEEAVDDTLSTSTNSGVILEEVLEAAPKWK 391


>ref|XP_012070117.1| PREDICTED: DNA repair endonuclease UVH1 isoform X1 [Jatropha curcas]
          Length = 991

 Score =  706 bits (1822), Expect(2) = 0.0
 Identities = 380/598 (63%), Positives = 448/598 (74%), Gaps = 6/598 (1%)
 Frame = -3

Query: 2244 ELLEEIEEDRQKEALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGRHKVMRE 2065
            E+LEEIEE+RQK ALS  E  LVE GG +S IVLVACKDERSC+QLEDCI+ G  KV+RE
Sbjct: 396  EILEEIEEERQKPALS-REDDLVESGGVDSGIVLVACKDERSCMQLEDCIMNGPQKVLRE 454

Query: 2064 EWEKYLLGKAELHSLR--KRNKKRSQDPKGYGILDGVVTGPS-ENTEASSISKLENDALM 1894
            EWEKYLL K EL  L+  ++ K + ++ KG+GILDGVV   + +N E+SS +K E+DAL+
Sbjct: 455  EWEKYLLSKVELRGLQIPQKRKPKPRESKGFGILDGVVPVTAVQNAESSSTNKQEHDALL 514

Query: 1893 AAASEISNLAKEEIDFGDTSQPCXXXXXXXXXXXXXXXXXXTPRAQVYXXXXXXXXXXXX 1714
            AAASEI N  ++     D  Q                                       
Sbjct: 515  AAASEIRNQHRKVAVTEDGPQVLVNSTSQRGRGKGCNKRGRATTRNSRNKDDGVNNKVAT 574

Query: 1713 XXXXXSDT---EGRLSETDKQLGESFQTTFVPNASDGEGIVQRHEQESDATELADAKPLP 1543
                   +   E + +  D+ +  S+Q     +A   EG ++RH  +SD++  +  K +P
Sbjct: 575  SDKPEISSSEHEDQSANNDQPIEGSYQEGNSKDAYTEEGFLRRHAHQSDSSR-SKGKQIP 633

Query: 1542 PVQFYALERDQYILDVWKPSVIIVYHPDMSFVREIEVHKAENPLKKLKVYFLFYEDSTEV 1363
            PV FYA E DQ ILD+ KPSVIIVYHPDM+FVREIEV+KAEN  KKLKVYFLFYEDSTEV
Sbjct: 634  PVHFYAQESDQPILDILKPSVIIVYHPDMTFVREIEVYKAENSSKKLKVYFLFYEDSTEV 693

Query: 1362 QKFEASIQRENGAFESLIRQKSLMMIPVDQDGRCIGTTAACEPQSLTLQNSLTRKAGGRK 1183
            QKFEASI+RENGAFESLIRQKSLMMIPVDQ+  C+G     E Q  + QNS+TRKAGGRK
Sbjct: 694  QKFEASIRRENGAFESLIRQKSLMMIPVDQNANCMGLNYPMESQPSSSQNSITRKAGGRK 753

Query: 1182 PMEKEMQVIVDIREFMSSLPNVLHQKGMRVIPVTLEVGDYVLSPLICVERKSIGDLFQSF 1003
             +EKE+QVIVD+REFMSSLPNVLHQKGMR+IPVTLEVGDY+LSPLICVERKSI DLF SF
Sbjct: 754  EVEKEIQVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFMSF 813

Query: 1002 ASGRLYHQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDXXXXXXXXXXXXXXLHFP 823
             SGRLYHQVETMVRYY++PVLLIEFSQ+KSFSFQSASDIGDD              +HFP
Sbjct: 814  TSGRLYHQVETMVRYYRMPVLLIEFSQEKSFSFQSASDIGDDVTPNSIISKLSLLVMHFP 873

Query: 822  RLRLIWSRSVYATAEIFAALKANQDEPDESKAMRVGVPSEDGTVENDVRAENYNTSAIEF 643
            RLR+IWSRS++ATAEIFA+LK+NQDEPDE KA+R+GVPSE+G VE+DVRAENYNTSA+EF
Sbjct: 874  RLRIIWSRSLHATAEIFASLKSNQDEPDEVKAIRIGVPSEEGIVEDDVRAENYNTSAVEF 933

Query: 642  LRRLPGVTDSNYRALIDGCKNLAELALLPVERLTELMGGQKAAKMLRDFLDAKCPTML 469
            LRRLPGVTDSNYRA++DGCK+LAELALLP+ERLTELMGGQKAA+ LRDFLDAK PT+L
Sbjct: 934  LRRLPGVTDSNYRAIMDGCKSLAELALLPIERLTELMGGQKAARTLRDFLDAKYPTLL 991



 Score =  433 bits (1113), Expect(2) = 0.0
 Identities = 232/404 (57%), Positives = 294/404 (72%), Gaps = 8/404 (1%)
 Frame = -2

Query: 3445 VLPFEEQIISDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSRGSLLILSASDSQKLNI 3266
            ++ F E II+DL++DP GGLV++SSG                S+G+LLILS S S K  I
Sbjct: 1    MVQFHEHIITDLLEDPTGGLVILSSGLSLSKLLSSVLLLHHPSQGTLLILSPSPSLKSQI 60

Query: 3265 LKALEIHQDTLXXXXXXXADLPSDLPSHHRPALYSSGCPFFLTPRILIADLLTGRVPPDS 3086
            L  L+ HQ+          ++ +DLP+H R +LYSSG   F+T RILI DLLT R+P  S
Sbjct: 61   LHHLKSHQN-YSPENHQIVEITADLPAHCRLSLYSSGQICFVTARILIVDLLTNRIPVTS 119

Query: 3085 ISSLLILNAHRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKAERIMKCLFV 2906
            +S L++LN H LS+TSTE+FIAR++K+LS +  I AF+DKPHAM++ FAK ERIMK L++
Sbjct: 120  LSGLVLLNVHALSETSTEAFIARIIKTLSQSVYIRAFTDKPHAMVAGFAKTERIMKSLYI 179

Query: 2905 RRLHLWPRFHVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLKELRRTNKVD 2726
            ++LHLWPRF V VS +LE+  P V+D+RVPMT  M GIQ A++  MDACLKE+R+TNKVD
Sbjct: 180  KKLHLWPRFQVYVSEELERMAPEVIDVRVPMTKYMMGIQKAIIEVMDACLKEMRKTNKVD 239

Query: 2725 VEDLTVQNGLFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLVRYDAVTYLK 2546
            VEDLTV+NGLFKSFDEIVRRQLDPIWH++GKKTKQLVSDL+TLRKLLDYLVRYDAV+YLK
Sbjct: 240  VEDLTVENGLFKSFDEIVRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVSYLK 299

Query: 2545 YLDTLRVSEGVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRIAAVGKN--NKKRKANNE 2372
            YLDTLRVSE  RSVW+FAE S KIF+ AK+RVY   R++  +I  + K+   KKRK    
Sbjct: 300  YLDTLRVSESFRSVWIFAESSFKIFDYAKKRVYHLARSNNSKINGLSKSTTGKKRK---- 355

Query: 2371 GEQMIKKGSETGDSSSNVLDPTM------GVVLDEVLEEAPKWK 2258
                +K+G    D+   V+D T+      GV+L+EVLE APKWK
Sbjct: 356  ----LKRGD---DNEEAVVDDTLSTSTNSGVILEEVLEAAPKWK 392


>ref|XP_006440160.1| hypothetical protein CICLE_v10024418mg [Citrus clementina]
            gi|557542422|gb|ESR53400.1| hypothetical protein
            CICLE_v10024418mg [Citrus clementina]
          Length = 1220

 Score =  706 bits (1821), Expect(2) = 0.0
 Identities = 382/600 (63%), Positives = 448/600 (74%), Gaps = 8/600 (1%)
 Frame = -3

Query: 2244 ELLEEIEEDRQKEALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGRHKVMRE 2065
            E+LEEIEE+R K+ALS  E++L++    +  IVLVACKDE SC+QLEDCI  G  KVMRE
Sbjct: 627  EVLEEIEEERLKQALS-REEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMRE 685

Query: 2064 EWEKYLLGKAELHSLRKRNKKR-SQDPKGYGILDGVVTGP-SENTEASSISKLENDALMA 1891
            EWEKYLL K +L  ++  +KK+ S++PKGYGILDGV     ++N EASS+SK E+DAL+A
Sbjct: 686  EWEKYLLSKVQLRGVQTSSKKKKSKEPKGYGILDGVAPVKIAQNAEASSVSKQEHDALLA 745

Query: 1890 AASEISNLAK-EEIDFGDTSQPCXXXXXXXXXXXXXXXXXXTPR-AQVYXXXXXXXXXXX 1717
            AAS+I N  K ++ D  +T                       P+ A              
Sbjct: 746  AASKIRNQGKSDDGDNPETYYGSKGPGRGRGKGRNRNGPACVPQSANKDSKSNSKAAIED 805

Query: 1716 XXXXXXSDTEGRLSETDKQL----GESFQTTFVPNASDGEGIVQRHEQESDATELADAKP 1549
                  S  EG   E    +    G   +T FV        +  +   ++D  E  D+KP
Sbjct: 806  KPEISGSGNEGPADEIHSGVVGYSGGMLETAFVEKE-----VQWKRSLKTDTAESKDSKP 860

Query: 1548 LPPVQFYALERDQYILDVWKPSVIIVYHPDMSFVREIEVHKAENPLKKLKVYFLFYEDST 1369
            +PPV FYALE DQ ILD+ KP VI+VYHPDMSFVR+IEV+KAENP  KLKVYFLFYEDST
Sbjct: 861  VPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYEDST 920

Query: 1368 EVQKFEASIQRENGAFESLIRQKSLMMIPVDQDGRCIGTTAACEPQSLTLQNSLTRKAGG 1189
            EVQKFEASI+RENGAFESLIRQKS MMIP+DQDG C+G  ++ E Q+ T QN++TRKAGG
Sbjct: 921  EVQKFEASIRRENGAFESLIRQKSFMMIPIDQDGHCLGLNSSTEAQATTSQNAITRKAGG 980

Query: 1188 RKPMEKEMQVIVDIREFMSSLPNVLHQKGMRVIPVTLEVGDYVLSPLICVERKSIGDLFQ 1009
            RK +EKEMQVIVD+REFMSSLPNVLHQ+GMR+IPV LEVGDY+LSPL+CVERKSI DLF 
Sbjct: 981  RKEVEKEMQVIVDMREFMSSLPNVLHQRGMRIIPVVLEVGDYILSPLMCVERKSIQDLFT 1040

Query: 1008 SFASGRLYHQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDXXXXXXXXXXXXXXLH 829
            SF SGRLYHQVETMVRYY+IPVLLIEFSQDKSFSFQSASDIGDD              LH
Sbjct: 1041 SFTSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPNNIISKLSLLVLH 1100

Query: 828  FPRLRLIWSRSVYATAEIFAALKANQDEPDESKAMRVGVPSEDGTVENDVRAENYNTSAI 649
            FPRLR+IWSRS++ATAEIFAALKANQDEPDE+KA+RVGVPSEDG VENDVRAENYNTSA+
Sbjct: 1101 FPRLRIIWSRSLHATAEIFAALKANQDEPDEAKAIRVGVPSEDGIVENDVRAENYNTSAV 1160

Query: 648  EFLRRLPGVTDSNYRALIDGCKNLAELALLPVERLTELMGGQKAAKMLRDFLDAKCPTML 469
            EFLRRLPGVTDSNYR+++DGCK+LA+L LLPVERL ELMGGQKAA+ LRDFLDAK PT+L
Sbjct: 1161 EFLRRLPGVTDSNYRSIMDGCKSLADLVLLPVERLAELMGGQKAAQTLRDFLDAKYPTLL 1220



 Score =  426 bits (1095), Expect(2) = 0.0
 Identities = 232/402 (57%), Positives = 290/402 (72%), Gaps = 15/402 (3%)
 Frame = -2

Query: 3418 SDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSRGSLLILSASDSQKLNILKALEIHQD 3239
            S L+ +PNGGLV++SSG                S+G+LL+LS+S + K  I+  L  +  
Sbjct: 232  SKLLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQIIHYLTPNAP 291

Query: 3238 TLXXXXXXXADLPSDLPSHHRPALYSSGCPFFLTPRILIADLLTGRVPPDSISSLLILNA 3059
             L        ++ +DLP++HR  LYSSG  FF+TPRILI DLLT R+P  +++ L+ILN 
Sbjct: 292  LLPS------EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLIILNT 345

Query: 3058 HRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKAERIMKCLFVRRLHLWPRF 2879
            H L++ STE+FI R++KSL+  A I AFSDKP AM+S FAK ERIMK LF+R+LHLWPRF
Sbjct: 346  HALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHLWPRF 405

Query: 2878 HVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLKELRRTNKVDVEDLTVQNG 2699
             V VS +LE+ PPVVVD+RVPM+  M GIQ A+L  MDACLKE+R+TNKVDVEDLTV+NG
Sbjct: 406  QVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLTVENG 465

Query: 2698 LFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLVRYDAVTYLKYLDTLRVSE 2519
            LFKSFDEI+RRQLDPIWH++GKKTKQLVSDL+TLRKLLDYLVRYDAVTYLKYLDTLRVSE
Sbjct: 466  LFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSE 525

Query: 2518 GVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRI-----AAVGKNNKKRKANN---EGE- 2366
              RSVW+FAE S+KIF+ AK+RVY+  R+DGV +     +  GK  K +K +N   EGE 
Sbjct: 526  SFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNEDEGEC 585

Query: 2365 ------QMIKKGSETGDSSSNVLDPTMGVVLDEVLEEAPKWK 2258
                   ++      G +SS     +  VVL+EVLEEAPKWK
Sbjct: 586  CPVVCFVLVYVFLTDGGTSST----STKVVLEEVLEEAPKWK 623


>emb|CBI25868.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score =  705 bits (1819), Expect(2) = 0.0
 Identities = 381/594 (64%), Positives = 457/594 (76%), Gaps = 2/594 (0%)
 Frame = -3

Query: 2244 ELLEEIEEDRQKEALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGRHKVMRE 2065
            E+L+EIEE+R+++A SS E    E    +S IVLVACKDERSC+QLED I     KVMRE
Sbjct: 625  EVLKEIEEEREQQA-SSREDASAEGDEDDSGIVLVACKDERSCMQLEDFIKSDPQKVMRE 683

Query: 2064 EWEKYLLGKAELHSLRKRNKKRSQDPKGYGILDGVVTGPS-ENTEASSISKLENDALMAA 1888
            EWEKYLL K EL  L+ R K ++++PKG+GIL+G V   S +NTE +SISKLE+DALMAA
Sbjct: 684  EWEKYLLSKVELQGLQTRKKNKAKEPKGFGILNGEVPSTSGQNTEPTSISKLEHDALMAA 743

Query: 1887 ASEISNLAKEEIDFGDTSQPCXXXXXXXXXXXXXXXXXXTPRAQVYXXXXXXXXXXXXXX 1708
            AS IS LAK++    D SQP                   T +AQV               
Sbjct: 744  ASVIS-LAKKDTAVSDNSQPHIGSGGRGKGRGKGRNIKITGKAQV--------------- 787

Query: 1707 XXXSDTEGRLSETDKQLGESFQTTFVPNASDGEGIVQRHEQESDATELADAKPLPPVQFY 1528
                 +  +++ ++ + G + ++    + +D +G  +    ++DA   ++AK LP V FY
Sbjct: 788  -----SGHKVNNSNSEQGRNDKSEVFGSENDSQG-KEIDPVKTDAPSFSNAKQLPLVHFY 841

Query: 1527 ALERDQY-ILDVWKPSVIIVYHPDMSFVREIEVHKAENPLKKLKVYFLFYEDSTEVQKFE 1351
            ALE ++  ILDV KPS++IVYHPDM+FVREIE++K ENP KKLKVYFLFYEDSTEVQKFE
Sbjct: 842  ALESEKSNILDVLKPSIVIVYHPDMTFVREIEIYKTENPSKKLKVYFLFYEDSTEVQKFE 901

Query: 1350 ASIQRENGAFESLIRQKSLMMIPVDQDGRCIGTTAACEPQSLTLQNSLTRKAGGRKPMEK 1171
            ASI+RENGAFESLIRQKSLMMIPVDQD R +G  ++ EPQ++T QNS+TRKAGGRK +EK
Sbjct: 902  ASIRRENGAFESLIRQKSLMMIPVDQDVRGLGLNSSIEPQAITSQNSITRKAGGRKEVEK 961

Query: 1170 EMQVIVDIREFMSSLPNVLHQKGMRVIPVTLEVGDYVLSPLICVERKSIGDLFQSFASGR 991
            E+QVIVD+REFMSSLPNVLHQKGMR+IPVTLEVGDY+LSPLICVERKSI DLF SFASGR
Sbjct: 962  EIQVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFGSFASGR 1021

Query: 990  LYHQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDXXXXXXXXXXXXXXLHFPRLRL 811
            LYHQVETMVRYY+IPVLLIEFSQDKSFSFQSAS+IGDD              LHFPRLR+
Sbjct: 1022 LYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASEIGDDVTPNSIISKLSLLVLHFPRLRI 1081

Query: 810  IWSRSVYATAEIFAALKANQDEPDESKAMRVGVPSEDGTVENDVRAENYNTSAIEFLRRL 631
            +WSRS++ATAEIFA+LKANQDEPDE+KA+RVGVPSE+G VENDVRAENYNTSA+E LRRL
Sbjct: 1082 VWSRSLHATAEIFASLKANQDEPDEAKAIRVGVPSEEGIVENDVRAENYNTSAVELLRRL 1141

Query: 630  PGVTDSNYRALIDGCKNLAELALLPVERLTELMGGQKAAKMLRDFLDAKCPTML 469
            PGVTDSNYRA++DGCK+LAELALLPVE+L ELMGG KAA+ LR+FLDAK PT+L
Sbjct: 1142 PGVTDSNYRAIMDGCKSLAELALLPVEKLAELMGGHKAARTLREFLDAKYPTLL 1195



 Score =  465 bits (1197), Expect(2) = 0.0
 Identities = 245/397 (61%), Positives = 301/397 (75%), Gaps = 2/397 (0%)
 Frame = -2

Query: 3442 LPFEEQIISDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSRGSLLILSASDSQKLNIL 3263
            L F E II++L++D NGGLVV+SSG                S+GSLL+LS+S SQK  IL
Sbjct: 236  LNFHEHIITELLEDSNGGLVVLSSGLCLPKLISSLLLLHHPSQGSLLLLSSSPSQKQLIL 295

Query: 3262 KALEIHQDTLXXXXXXXADLPSDLPSHHRPALYSSGCPFFLTPRILIADLLTGRVPPDSI 3083
              L+ + +         +++ +DLP+HHR +LY+SG  FF+T RILI DLLT RVP   I
Sbjct: 296  YHLDANPNP---NPNLPSEITADLPAHHRHSLYTSGSVFFITSRILIVDLLTSRVPTSGI 352

Query: 3082 SSLLILNAHRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKAERIMKCLFVR 2903
            + L+ILNAH LS+T TE+FI R+++SL+P A + AFSDKPHAM+S FAKAERIMKCLF+R
Sbjct: 353  AGLIILNAHSLSETCTEAFIVRIIRSLNPAAYVRAFSDKPHAMVSGFAKAERIMKCLFLR 412

Query: 2902 RLHLWPRFHVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLKELRRTNKVDV 2723
            RLHLWPRF V VS +LE+ PPVVVDIRVPMT  M+GIQ A++  +DACLKE+R+TNKVDV
Sbjct: 413  RLHLWPRFQVHVSQELERCPPVVVDIRVPMTAHMQGIQKAIVEVLDACLKEMRKTNKVDV 472

Query: 2722 EDLTVQNGLFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLVRYDAVTYLKY 2543
            +DLTV+NGLFKSFDEIVRRQLDPIWH +GKKTKQLVSDL+TLRKLLDYLVRYDAV+YLKY
Sbjct: 473  DDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVSYLKY 532

Query: 2542 LDTLRVSEGVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRIAAVGKN--NKKRKANNEG 2369
            LD+LR SE +RSVW+FAE S+KIFE AK+RVY  VR+DG ++    K+  NKKRK NN  
Sbjct: 533  LDSLRASENIRSVWIFAESSYKIFEYAKKRVYHFVRSDGGKLGGQNKSVTNKKRKLNN-- 590

Query: 2368 EQMIKKGSETGDSSSNVLDPTMGVVLDEVLEEAPKWK 2258
                 K    GDS   ++    GVVL+EVLEE+PKWK
Sbjct: 591  ----NKNEANGDSV--LVGTNGGVVLEEVLEESPKWK 621


>ref|XP_006477073.1| PREDICTED: DNA repair endonuclease UVH1-like [Citrus sinensis]
          Length = 982

 Score =  705 bits (1819), Expect(2) = 0.0
 Identities = 384/602 (63%), Positives = 448/602 (74%), Gaps = 10/602 (1%)
 Frame = -3

Query: 2244 ELLEEIEEDRQKEALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGRHKVMRE 2065
            E+LEEIEE+R K+A SS E++L++    +  IVLVACKDE SC+QLEDCI  G  KVMRE
Sbjct: 389  EVLEEIEEERLKQA-SSREEVLLDGEENDHGIVLVACKDECSCMQLEDCIRNGSEKVMRE 447

Query: 2064 EWEKYLLGKAELHSLRKRNKKR-SQDPKGYGILDGVV-TGPSENTEASSISKLENDALMA 1891
            EWEKYLL K +L S++  +KK+ S++PKGYGILDGV     ++N EASS+SK E+DAL+A
Sbjct: 448  EWEKYLLSKVQLRSVQTSSKKKKSKEPKGYGILDGVAPVTTAQNAEASSVSKQEHDALLA 507

Query: 1890 AASEISNLAKEEIDFGD---TSQPCXXXXXXXXXXXXXXXXXXTPR-AQVYXXXXXXXXX 1723
            AAS+I N  K   D GD   T                       P+ A            
Sbjct: 508  AASKIRNQGKS--DDGDNPKTYYGSKGPGRGRGKGRNRNGPACVPQCANKDSKNNSKAAI 565

Query: 1722 XXXXXXXXSDTEGRLSETDKQL----GESFQTTFVPNASDGEGIVQRHEQESDATELADA 1555
                    S  EG   E    +    G   +T FV        +  +   ++D  E  D+
Sbjct: 566  EDKPEISGSGNEGPADEIHSSVVGYSGGMLETAFVEKE-----VQWKCSLKTDTAESKDS 620

Query: 1554 KPLPPVQFYALERDQYILDVWKPSVIIVYHPDMSFVREIEVHKAENPLKKLKVYFLFYED 1375
            KPLPPV FYALE DQ ILD+ KP VI+VYHPDMSFVR+IEV+KAENP  KLKVYFLFYED
Sbjct: 621  KPLPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIEVYKAENPSIKLKVYFLFYED 680

Query: 1374 STEVQKFEASIQRENGAFESLIRQKSLMMIPVDQDGRCIGTTAACEPQSLTLQNSLTRKA 1195
            STEVQKF+A I+RENGAFESLIRQKS MMIP+DQDG C+G  ++ E Q+ T QN++TRKA
Sbjct: 681  STEVQKFKAGIRRENGAFESLIRQKSFMMIPIDQDGHCLGLNSSTEAQATTSQNAITRKA 740

Query: 1194 GGRKPMEKEMQVIVDIREFMSSLPNVLHQKGMRVIPVTLEVGDYVLSPLICVERKSIGDL 1015
            GGRK +EKEMQVIVD+REFMSSLPNVLHQ+GMR+IPV LEVGDY+LSPL+CVERKSI DL
Sbjct: 741  GGRKEVEKEMQVIVDMREFMSSLPNVLHQRGMRIIPVVLEVGDYILSPLMCVERKSIQDL 800

Query: 1014 FQSFASGRLYHQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDXXXXXXXXXXXXXX 835
            F SF SGRLYHQVETMVRYY+IPVLLIEFSQDKSFSFQSASDIGDD              
Sbjct: 801  FTSFTSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPNNIISKLSLLV 860

Query: 834  LHFPRLRLIWSRSVYATAEIFAALKANQDEPDESKAMRVGVPSEDGTVENDVRAENYNTS 655
            LHFPRLR+IWSRS++ATAEIFAALKANQDEPDE+KA+RVGVPSEDG VEND+RAENYNTS
Sbjct: 861  LHFPRLRIIWSRSLHATAEIFAALKANQDEPDEAKAIRVGVPSEDGIVENDMRAENYNTS 920

Query: 654  AIEFLRRLPGVTDSNYRALIDGCKNLAELALLPVERLTELMGGQKAAKMLRDFLDAKCPT 475
            A+EFLRRLPGVTDSNYR+++DGCK+LA+LALLPVERL ELMGGQKAA+ LRDFLDAK PT
Sbjct: 921  AVEFLRRLPGVTDSNYRSIMDGCKSLADLALLPVERLAELMGGQKAAQTLRDFLDAKYPT 980

Query: 474  ML 469
            +L
Sbjct: 981  LL 982



 Score =  441 bits (1135), Expect(2) = 0.0
 Identities = 234/399 (58%), Positives = 291/399 (72%), Gaps = 2/399 (0%)
 Frame = -2

Query: 3448 MVLPFEEQIISDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSRGSLLILSASDSQKLN 3269
            MVL F + II++L+ +PNGGLV++SSG                S+G+LL+LS+S + K  
Sbjct: 1    MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ 60

Query: 3268 ILKALEIHQDTLXXXXXXXADLPSDLPSHHRPALYSSGCPFFLTPRILIADLLTGRVPPD 3089
            I+  L  +   L        ++ +DLP++HR  LYSSG  FF+TPRILI DLLT R+P  
Sbjct: 61   IIHYLAPNAPLLPS------EITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTS 114

Query: 3088 SISSLLILNAHRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKAERIMKCLF 2909
            +++ L+ILN H L++ STE+FI R++KSL+  A I AFSDKP AM+S FAK ERIMK LF
Sbjct: 115  NLAGLIILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLF 174

Query: 2908 VRRLHLWPRFHVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLKELRRTNKV 2729
            +R+LHLWPRF V VS +LE+ PPVVVD+RVPM+  M GIQ A+L  MDACLKE+R+TNKV
Sbjct: 175  IRKLHLWPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKV 234

Query: 2728 DVEDLTVQNGLFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLVRYDAVTYL 2549
            DVEDLTV+NGLFKSFDEI+RRQLDPIWH++GKKTKQLVSDL+TLRKLLDYLVRYDAVTYL
Sbjct: 235  DVEDLTVENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYL 294

Query: 2548 KYLDTLRVSEGVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRIAAVGKN--NKKRKANN 2375
            KYLDTLRVSE  RSVW+FAE S+KIF+ AK+RVY+  R+DGV +    K+   KKRK   
Sbjct: 295  KYLDTLRVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRK--- 351

Query: 2374 EGEQMIKKGSETGDSSSNVLDPTMGVVLDEVLEEAPKWK 2258
                 +KK     D        +  VVL+EVLEEAPKWK
Sbjct: 352  -----LKKVDNNEDEDGGTSSTSTKVVLEEVLEEAPKWK 385


>ref|XP_008676498.1| PREDICTED: RAD1 DNA repair protein homolog isoform X1 [Zea mays]
            gi|670392250|ref|XP_008676499.1| PREDICTED: RAD1 DNA
            repair protein homolog isoform X1 [Zea mays]
            gi|670392252|ref|XP_008676500.1| PREDICTED: RAD1 DNA
            repair protein homolog isoform X1 [Zea mays]
            gi|670392254|ref|XP_008676501.1| PREDICTED: RAD1 DNA
            repair protein homolog isoform X1 [Zea mays]
            gi|670392256|ref|XP_008676502.1| PREDICTED: RAD1 DNA
            repair protein homolog isoform X1 [Zea mays]
            gi|670392258|ref|XP_008676503.1| PREDICTED: RAD1 DNA
            repair protein homolog isoform X1 [Zea mays]
            gi|413926650|gb|AFW66582.1| hypothetical protein
            ZEAMMB73_828091 [Zea mays]
          Length = 986

 Score =  705 bits (1819), Expect(2) = 0.0
 Identities = 382/595 (64%), Positives = 445/595 (74%), Gaps = 3/595 (0%)
 Frame = -3

Query: 2244 ELLEEIEEDRQKEALSSHEQILVEDGGGNSDIVLVACKDERSCLQLEDCILKGRHKVMRE 2065
            ELL+EI E R K   SS   +  ED    S IVLV+CKDER+CLQL++CILKG  +VMRE
Sbjct: 402  ELLQEIAEQRMK---SSAGNVHDEDKNDESGIVLVSCKDERTCLQLQECILKGPCQVMRE 458

Query: 2064 EWEKYLLGKAELHSLRKRNKKRSQDPKGYGILDGVVT-GPSENTEASSISKLENDALMAA 1888
            EWEKYL+GKAELH L K +K++S+ PKG G+LDG V  G SE+    SISKLE +AL+AA
Sbjct: 459  EWEKYLIGKAELHGLNK-DKRKSEQPKGVGVLDGEVQMGSSESVCPVSISKLETNALLAA 517

Query: 1887 ASEISNLAKEEIDFGDTSQPCXXXXXXXXXXXXXXXXXXTPRAQVYXXXXXXXXXXXXXX 1708
            ASE+ N++ E      ++  C                    + Q                
Sbjct: 518  ASELRNISNEADVKSSSNSSCSKAGGAKGKPKKTTS-----KRQGSNRKNKSKEGNDNSQ 572

Query: 1707 XXXSDTEGRLSETDKQ--LGESFQTTFVPNASDGEGIVQRHEQESDATELADAKPLPPVQ 1534
                D+EG+  + D Q  +  S  + +  + S     V +    S    LA+AKPLPPVQ
Sbjct: 573  GTGLDSEGQSGKADVQAEIVASKMSAYDASMSASTSNV-KFNHSSAFGNLANAKPLPPVQ 631

Query: 1533 FYALERDQYILDVWKPSVIIVYHPDMSFVREIEVHKAENPLKKLKVYFLFYEDSTEVQKF 1354
            F+AL+ D  +LDVWKPSVIIVYHPD++FVREIEV+KAEN  +KLKVYFLFYEDSTEVQK+
Sbjct: 632  FHALDSDHQVLDVWKPSVIIVYHPDITFVREIEVYKAENSSRKLKVYFLFYEDSTEVQKY 691

Query: 1353 EASIQRENGAFESLIRQKSLMMIPVDQDGRCIGTTAACEPQSLTLQNSLTRKAGGRKPME 1174
            E+SI+REN AFESLIRQKSLMMIPVDQDGRCIG T A EP+    QNS+TRKAGG+K  E
Sbjct: 692  ESSIRRENEAFESLIRQKSLMMIPVDQDGRCIGPTVANEPEPPLCQNSITRKAGGKKAPE 751

Query: 1173 KEMQVIVDIREFMSSLPNVLHQKGMRVIPVTLEVGDYVLSPLICVERKSIGDLFQSFASG 994
            KEMQVIVD+REFMSSLPNVLHQKG+R++PVTLEVGDYVLSPLICVERKSI DLFQSFASG
Sbjct: 752  KEMQVIVDMREFMSSLPNVLHQKGIRIVPVTLEVGDYVLSPLICVERKSIADLFQSFASG 811

Query: 993  RLYHQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDXXXXXXXXXXXXXXLHFPRLR 814
            RLY+QVETM RYYKIPVLLIEFSQDKSFSFQSA++IGDD              LHFPRLR
Sbjct: 812  RLYNQVETMARYYKIPVLLIEFSQDKSFSFQSANEIGDDVSPTNIISKLSLLVLHFPRLR 871

Query: 813  LIWSRSVYATAEIFAALKANQDEPDESKAMRVGVPSEDGTVENDVRAENYNTSAIEFLRR 634
            +IWSRS++ATAEIF +LK NQDEPDE KA RVGVPSEDG VE+DVR+ENYNTSAIEFLRR
Sbjct: 872  IIWSRSLHATAEIFMSLKTNQDEPDEKKATRVGVPSEDGIVEDDVRSENYNTSAIEFLRR 931

Query: 633  LPGVTDSNYRALIDGCKNLAELALLPVERLTELMGGQKAAKMLRDFLDAKCPTML 469
            LPGVTDSNYRA++DGC +LAELALLPVERL ELMGGQKAA+ L++FLDAKCPTML
Sbjct: 932  LPGVTDSNYRAIMDGCNSLAELALLPVERLAELMGGQKAARTLKEFLDAKCPTML 986



 Score =  453 bits (1166), Expect(2) = 0.0
 Identities = 247/410 (60%), Positives = 296/410 (72%), Gaps = 14/410 (3%)
 Frame = -2

Query: 3445 VLPFEEQIISDLVDDPNGGLVVVSSGXXXXXXXXXXXXXXXXSRGS------LLILSASD 3284
            +L FE+Q+++DLV+DPNGGLVV+SSG                + G+      LL+LSA+D
Sbjct: 1    MLAFEQQVLADLVEDPNGGLVVLSSGLPLASLAATLLLHLHQTPGNAAGGGCLLVLSATD 60

Query: 3283 SQKLNILKALEIHQDTLXXXXXXXADLPSDLPSHHRPALYSSGCPFFLTPRILIADLLTG 3104
            + K  I + L   QD L        D+P DL +  R  LY+SG   FL+PR L ADLLT 
Sbjct: 61   TLKARIRRRL---QDKLQVH-----DVPPDLAAQQRATLYASGAALFLSPRALAADLLTS 112

Query: 3103 RVPPDSISSLLILNAHRLSDTSTESFIARVLKSLSPNAPILAFSDKPHAMISSFAKAERI 2924
            R+ P  + +LL+L+AHR +DTS+++FI R+L+  +   P+ AFSD PHAM++ F+KAER 
Sbjct: 113  RLLPSRVQALLLLSAHRSTDTSSDAFICRLLRQRNL-LPVYAFSDCPHAMVAGFSKAERT 171

Query: 2923 MKCLFVRRLHLWPRFHVAVSADLEKAPPVVVDIRVPMTVPMRGIQTAVLGAMDACLKELR 2744
            MK L+VRRLHLWPRFHV  +ADLE+APP VVD+RVPMT PMRGIQ AVL  MDACLKELR
Sbjct: 172  MKSLYVRRLHLWPRFHVLAAADLERAPPDVVDVRVPMTPPMRGIQAAVLATMDACLKELR 231

Query: 2743 RTNKVDVEDLTVQNGLFKSFDEIVRRQLDPIWHMIGKKTKQLVSDLRTLRKLLDYLVRYD 2564
            RTNKVDVEDLTV  GLFKSFDEIVRRQLDPIWH +GKKTKQLV+DLRTLRKLLDYLVRYD
Sbjct: 232  RTNKVDVEDLTVDKGLFKSFDEIVRRQLDPIWHTLGKKTKQLVADLRTLRKLLDYLVRYD 291

Query: 2563 AVTYLKYLDTLRVSEGVRSVWMFAEPSHKIFELAKRRVYQAVRADGVRIAAVGKN--NKK 2390
            AVTYLKYLDTLRVSEGVRSVW+ A+ SH+IFELAKRRVYQAVR DGV ++   K    KK
Sbjct: 292  AVTYLKYLDTLRVSEGVRSVWILADSSHRIFELAKRRVYQAVRTDGVNVSIDNKGTPTKK 351

Query: 2389 RKANNEGEQMIKKGSETGDSSSNV------LDPTMGVVLDEVLEEAPKWK 2258
            RK         KKG  T +  S V       +  +G+VL+EVLEEAPKWK
Sbjct: 352  RKV---AHNSTKKGKVTENEDSTVGPNTQKANTDVGIVLEEVLEEAPKWK 398