BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00001034
         (1047 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008784482.1| PREDICTED: DNA-directed RNA polymerases IV a...   523   e-146
ref|XP_010937061.1| PREDICTED: DNA-directed RNA polymerases IV a...   522   e-145
ref|XP_012703111.1| PREDICTED: DNA-directed RNA polymerases IV a...   519   e-144
gb|EEE61785.1| hypothetical protein OsJ_16357 [Oryza sativa Japo...   519   e-144
gb|EEC78111.1| hypothetical protein OsI_17620 [Oryza sativa Indi...   519   e-144
ref|NP_001054041.1| Os04g0641000, partial [Oryza sativa Japonica...   519   e-144
emb|CAJ86030.1| B0414F07.4 [Oryza sativa Indica Group]                519   e-144
emb|CAE05960.2| OSJNBa0063C18.1 [Oryza sativa Japonica Group]         519   e-144
emb|CAD41847.2| OSJNBb0079B02.6 [Oryza sativa Japonica Group]         519   e-144
ref|XP_002468227.1| hypothetical protein SORBIDRAFT_01g042100 [S...   518   e-144
ref|XP_002447199.1| hypothetical protein SORBIDRAFT_06g030300 [S...   518   e-144
gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA p...   517   e-144
ref|NP_001177299.1| required to maintain repression7 [Zea mays] ...   517   e-144
gb|AFW59623.1| putative DNA-directed RNA polymerase subunit fami...   517   e-144
gb|AAY45706.1| RNA polymerase IV second largest subunit [Zea mays]    517   e-144
ref|XP_006652896.1| PREDICTED: DNA-directed RNA polymerases IV a...   516   e-143
ref|XP_009413518.1| PREDICTED: DNA-directed RNA polymerases IV a...   509   e-141
ref|XP_010275247.1| PREDICTED: DNA-directed RNA polymerases IV a...   500   e-139
ref|XP_008452849.1| PREDICTED: DNA-directed RNA polymerases IV a...   497   e-138
ref|XP_003564776.1| PREDICTED: DNA-directed RNA polymerases IV a...   496   e-138

>ref|XP_008784482.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Phoenix dactylifera]
          Length = 1189

 Score =  523 bits (1348), Expect = e-146
 Identities = 254/286 (88%), Positives = 268/286 (93%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF
Sbjct: 904  KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 963

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T +GIVPDIVINPHAFPTRQTPGQLLEAALGKGIA GG   YATPFTT SVDVIT+QLH 
Sbjct: 964  TCQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACGGSVRYATPFTTASVDVITEQLHR 1023

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              F RWGSE+VLNGRTGE+MR+MIF+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVAD
Sbjct: 1024 AGFSRWGSEKVLNGRTGEVMRSMIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVAD 1083

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNG- 717
            RKRFGGVKFGEMERDCLLAHGAA+NLHERLFTLSDFSQMHIC+TC R ANVI R V  G 
Sbjct: 1084 RKRFGGVKFGEMERDCLLAHGAASNLHERLFTLSDFSQMHICQTCKRAANVILRPVVGGN 1143

Query: 718  KIRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
            KIRGPYC +C+S+ENIV+INVPYGAKLLYQELFSMGICLKF+TEVC
Sbjct: 1144 KIRGPYCNYCQSSENIVKINVPYGAKLLYQELFSMGICLKFDTEVC 1189


>ref|XP_010937061.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Elaeis guineensis]
          Length = 1189

 Score =  522 bits (1344), Expect = e-145
 Identities = 254/286 (88%), Positives = 267/286 (93%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF
Sbjct: 904  KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 963

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T +GIVPDIVINPHAFPTRQTPGQLLEAALGKGIA GG   YATPFTT SVDVIT+QLH 
Sbjct: 964  TCQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACGGSVRYATPFTTASVDVITEQLHR 1023

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              F RWGSE+VLNGRTGE+MR+MIF+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVAD
Sbjct: 1024 AGFSRWGSEKVLNGRTGEVMRSMIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVAD 1083

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNG- 717
            RKRFGGVKFGEMERDCLLAHGAA+NLHERLF LSDFSQMHIC+TC R ANVI R V  G 
Sbjct: 1084 RKRFGGVKFGEMERDCLLAHGAASNLHERLFMLSDFSQMHICQTCRRAANVILRPVVGGN 1143

Query: 718  KIRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
            KIRGPYC FC+S+ENIV+INVPYGAKLLYQELFSMGICLKF+TEVC
Sbjct: 1144 KIRGPYCNFCQSSENIVKINVPYGAKLLYQELFSMGICLKFDTEVC 1189


>ref|XP_012703111.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Setaria italica]
          Length = 1234

 Score =  519 bits (1337), Expect = e-144
 Identities = 252/286 (88%), Positives = 265/286 (92%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTEKGMVQKV+LSANDEGKNFAVVTLRQVR+PCLGDKFSSMHGQKGVVGFLESQENFPF
Sbjct: 949  KHTEKGMVQKVLLSANDEGKNFAVVTLRQVRTPCLGDKFSSMHGQKGVVGFLESQENFPF 1008

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T +GIVPDIVINPHAFPTRQTPGQLLEAALGKGIA GG   YATPFTT SVDVI +QLH 
Sbjct: 1009 TRDGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASVDVIAEQLHK 1068

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              F +WG+E V+NGRTGE M++M+F+GPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD
Sbjct: 1069 AGFSKWGAESVINGRTGERMQSMVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 1128

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNG- 717
            RKRFGGVKFGEMERDCLLAHGAAANLHERLF LSDFSQMHIC+ C RVANVI R V  G 
Sbjct: 1129 RKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICQKCERVANVIMRCVPGGK 1188

Query: 718  KIRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
            KIRGPYCGFCKS+ENIVRINVPYGAKLLYQELFSMGICLKFETEVC
Sbjct: 1189 KIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGICLKFETEVC 1234


>gb|EEE61785.1| hypothetical protein OsJ_16357 [Oryza sativa Japonica Group]
          Length = 1185

 Score =  519 bits (1337), Expect = e-144
 Identities = 252/286 (88%), Positives = 265/286 (92%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTEKGMVQ+V+LSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF
Sbjct: 900  KHTEKGMVQRVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 959

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T +GIVPDIVINPHAFPTRQTPGQLLEAALGKGIA GG   YATPFTT S DVITDQLH 
Sbjct: 960  TYQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHK 1019

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              F RWG+E VLNGRTGE M ++IF+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVAD
Sbjct: 1020 AGFSRWGAESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVAD 1079

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNG- 717
            RKRFGGVKFGEMERDCLLAHGAAANLHERLF LSDFSQMH+C+TC RVANVI R V  G 
Sbjct: 1080 RKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGK 1139

Query: 718  KIRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
            KIRGPYCGFC+S+ENIVRINVPYGAKLLYQELFSMGICL+FETEVC
Sbjct: 1140 KIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1185


>gb|EEC78111.1| hypothetical protein OsI_17620 [Oryza sativa Indica Group]
          Length = 1177

 Score =  519 bits (1337), Expect = e-144
 Identities = 252/286 (88%), Positives = 265/286 (92%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTEKGMVQ+V+LSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF
Sbjct: 892  KHTEKGMVQRVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 951

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T +GIVPDIVINPHAFPTRQTPGQLLEAALGKGIA GG   YATPFTT S DVITDQLH 
Sbjct: 952  TYQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHK 1011

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              F RWG+E VLNGRTGE M ++IF+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVAD
Sbjct: 1012 AGFSRWGAESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVAD 1071

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNG- 717
            RKRFGGVKFGEMERDCLLAHGAAANLHERLF LSDFSQMH+C+TC RVANVI R V  G 
Sbjct: 1072 RKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGK 1131

Query: 718  KIRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
            KIRGPYCGFC+S+ENIVRINVPYGAKLLYQELFSMGICL+FETEVC
Sbjct: 1132 KIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1177


>ref|NP_001054041.1| Os04g0641000, partial [Oryza sativa Japonica Group]
            gi|113565612|dbj|BAF15955.1| Os04g0641000, partial [Oryza
            sativa Japonica Group]
          Length = 1270

 Score =  519 bits (1337), Expect = e-144
 Identities = 252/286 (88%), Positives = 265/286 (92%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTEKGMVQ+V+LSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF
Sbjct: 985  KHTEKGMVQRVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 1044

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T +GIVPDIVINPHAFPTRQTPGQLLEAALGKGIA GG   YATPFTT S DVITDQLH 
Sbjct: 1045 TYQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHK 1104

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              F RWG+E VLNGRTGE M ++IF+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVAD
Sbjct: 1105 AGFSRWGAESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVAD 1164

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNG- 717
            RKRFGGVKFGEMERDCLLAHGAAANLHERLF LSDFSQMH+C+TC RVANVI R V  G 
Sbjct: 1165 RKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGK 1224

Query: 718  KIRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
            KIRGPYCGFC+S+ENIVRINVPYGAKLLYQELFSMGICL+FETEVC
Sbjct: 1225 KIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1270


>emb|CAJ86030.1| B0414F07.4 [Oryza sativa Indica Group]
          Length = 1343

 Score =  519 bits (1337), Expect = e-144
 Identities = 252/286 (88%), Positives = 265/286 (92%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTEKGMVQ+V+LSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF
Sbjct: 1058 KHTEKGMVQRVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 1117

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T +GIVPDIVINPHAFPTRQTPGQLLEAALGKGIA GG   YATPFTT S DVITDQLH 
Sbjct: 1118 TYQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHK 1177

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              F RWG+E VLNGRTGE M ++IF+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVAD
Sbjct: 1178 AGFSRWGAESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVAD 1237

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNG- 717
            RKRFGGVKFGEMERDCLLAHGAAANLHERLF LSDFSQMH+C+TC RVANVI R V  G 
Sbjct: 1238 RKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGK 1297

Query: 718  KIRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
            KIRGPYCGFC+S+ENIVRINVPYGAKLLYQELFSMGICL+FETEVC
Sbjct: 1298 KIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1343


>emb|CAE05960.2| OSJNBa0063C18.1 [Oryza sativa Japonica Group]
          Length = 1316

 Score =  519 bits (1337), Expect = e-144
 Identities = 252/286 (88%), Positives = 265/286 (92%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTEKGMVQ+V+LSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF
Sbjct: 1031 KHTEKGMVQRVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 1090

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T +GIVPDIVINPHAFPTRQTPGQLLEAALGKGIA GG   YATPFTT S DVITDQLH 
Sbjct: 1091 TYQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHK 1150

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              F RWG+E VLNGRTGE M ++IF+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVAD
Sbjct: 1151 AGFSRWGAESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVAD 1210

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNG- 717
            RKRFGGVKFGEMERDCLLAHGAAANLHERLF LSDFSQMH+C+TC RVANVI R V  G 
Sbjct: 1211 RKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGK 1270

Query: 718  KIRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
            KIRGPYCGFC+S+ENIVRINVPYGAKLLYQELFSMGICL+FETEVC
Sbjct: 1271 KIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1316


>emb|CAD41847.2| OSJNBb0079B02.6 [Oryza sativa Japonica Group]
          Length = 1343

 Score =  519 bits (1337), Expect = e-144
 Identities = 252/286 (88%), Positives = 265/286 (92%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTEKGMVQ+V+LSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF
Sbjct: 1058 KHTEKGMVQRVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 1117

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T +GIVPDIVINPHAFPTRQTPGQLLEAALGKGIA GG   YATPFTT S DVITDQLH 
Sbjct: 1118 TYQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHK 1177

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              F RWG+E VLNGRTGE M ++IF+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVAD
Sbjct: 1178 AGFSRWGAESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVAD 1237

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNG- 717
            RKRFGGVKFGEMERDCLLAHGAAANLHERLF LSDFSQMH+C+TC RVANVI R V  G 
Sbjct: 1238 RKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGK 1297

Query: 718  KIRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
            KIRGPYCGFC+S+ENIVRINVPYGAKLLYQELFSMGICL+FETEVC
Sbjct: 1298 KIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1343


>ref|XP_002468227.1| hypothetical protein SORBIDRAFT_01g042100 [Sorghum bicolor]
            gi|241922081|gb|EER95225.1| hypothetical protein
            SORBIDRAFT_01g042100 [Sorghum bicolor]
          Length = 1228

 Score =  518 bits (1334), Expect = e-144
 Identities = 251/286 (87%), Positives = 267/286 (93%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTEKGMVQKV+LSANDEGKNFAVVTLRQVR+PCLGDKFSSMHGQKGVVGFLESQENFPF
Sbjct: 943  KHTEKGMVQKVLLSANDEGKNFAVVTLRQVRTPCLGDKFSSMHGQKGVVGFLESQENFPF 1002

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T +GIVPDIVINPHAFPTRQTPGQLLEAALGKGIA  G   YATPFTT SVDVI +QLH 
Sbjct: 1003 THKGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACKGTMRYATPFTTASVDVIAEQLHR 1062

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              + RWG+E VLNGRTGE M+++IF+GPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD
Sbjct: 1063 AGYSRWGTENVLNGRTGERMQSLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 1122

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNG- 717
            RKRFGGVKFGEMERDCLLAHG+AANLHERLF LSDFSQMHIC+TC RVANV+ R+VS G 
Sbjct: 1123 RKRFGGVKFGEMERDCLLAHGSAANLHERLFMLSDFSQMHICQTCERVANVVMRSVSGGK 1182

Query: 718  KIRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
            KIRGPYCGFCKS+ENIVRINVPYGAKLLYQELFSMGICLKF+TEVC
Sbjct: 1183 KIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGICLKFDTEVC 1228


>ref|XP_002447199.1| hypothetical protein SORBIDRAFT_06g030300 [Sorghum bicolor]
            gi|241938382|gb|EES11527.1| hypothetical protein
            SORBIDRAFT_06g030300 [Sorghum bicolor]
          Length = 1239

 Score =  518 bits (1333), Expect = e-144
 Identities = 250/286 (87%), Positives = 266/286 (93%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTEKGMVQKV+LSANDEGKNFAVVTLRQVR+PCLGDKFSSMHGQKGVVGFLESQENFPF
Sbjct: 954  KHTEKGMVQKVLLSANDEGKNFAVVTLRQVRTPCLGDKFSSMHGQKGVVGFLESQENFPF 1013

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T EGIVPDIVINPHAFPTRQTPGQLLEAALGKGIA  G   YATPFTT SVDVI +QLH 
Sbjct: 1014 THEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACKGTMRYATPFTTASVDVIAEQLHK 1073

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              + RWG+E VLNGRTGE M++++F+GPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD
Sbjct: 1074 AGYSRWGAENVLNGRTGERMQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 1133

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNG- 717
            RKRFGGVKFGEMERDCLLAHG+AANLHERLF LSDFSQMHIC+TC RVANV+ R+V  G 
Sbjct: 1134 RKRFGGVKFGEMERDCLLAHGSAANLHERLFMLSDFSQMHICQTCERVANVVMRSVPGGK 1193

Query: 718  KIRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
            KIRGPYCGFCKS+ENIVRINVPYGAKLLYQELFSMGICLKF+TEVC
Sbjct: 1194 KIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGICLKFDTEVC 1239


>gb|ADB19859.1| mutant required to maintain repression 7-2/ RNA polymerase D second
            largest subunit 2-2 [Zea mays]
          Length = 1229

 Score =  517 bits (1331), Expect = e-144
 Identities = 250/286 (87%), Positives = 266/286 (93%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTEKGMVQKV+LSANDEGKNFAVVTLRQVR+PCLGDKFSSMHGQKGVVGFLESQENFPF
Sbjct: 944  KHTEKGMVQKVLLSANDEGKNFAVVTLRQVRTPCLGDKFSSMHGQKGVVGFLESQENFPF 1003

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T EGIVPDIVINPHAFPTRQTPGQLLEAALGKGIA  G   YATPFTT SVDVI +QLH 
Sbjct: 1004 THEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACKGTMRYATPFTTASVDVIAEQLHR 1063

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              + RWGSE VLNGRTGE +++++F+GPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD
Sbjct: 1064 AGYSRWGSENVLNGRTGERVQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 1123

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNG- 717
            RKRFGGVKFGEMERDCLLAHG+AANLHERLF LSDFSQMHIC+TC RVANV+ R+V  G 
Sbjct: 1124 RKRFGGVKFGEMERDCLLAHGSAANLHERLFLLSDFSQMHICQTCERVANVVMRSVPGGK 1183

Query: 718  KIRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
            KIRGPYCGFCKS+ENIVRINVPYGAKLLYQELFSMGICLKFET+VC
Sbjct: 1184 KIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGICLKFETQVC 1229


>ref|NP_001177299.1| required to maintain repression7 [Zea mays]
            gi|670371411|ref|XP_008666978.1| PREDICTED: required to
            maintain repression7 isoform X1 [Zea mays]
            gi|283443696|gb|ADB19857.1| required to maintain
            repression 7/RNA polymerase D second largest subunit [Zea
            mays] gi|297185477|gb|ADI24118.1| RPD2/E2a [Zea mays]
            gi|414585188|tpg|DAA35759.1| TPA: putative DNA-directed
            RNA polymerase subunit family protein [Zea mays]
          Length = 1229

 Score =  517 bits (1331), Expect = e-144
 Identities = 250/286 (87%), Positives = 266/286 (93%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTEKGMVQKV+LSANDEGKNFAVVTLRQVR+PCLGDKFSSMHGQKGVVGFLESQENFPF
Sbjct: 944  KHTEKGMVQKVLLSANDEGKNFAVVTLRQVRTPCLGDKFSSMHGQKGVVGFLESQENFPF 1003

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T EGIVPDIVINPHAFPTRQTPGQLLEAALGKGIA  G   YATPFTT SVDVI +QLH 
Sbjct: 1004 THEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACKGTMRYATPFTTASVDVIAEQLHR 1063

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              + RWGSE VLNGRTGE +++++F+GPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD
Sbjct: 1064 AGYSRWGSENVLNGRTGERVQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 1123

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNG- 717
            RKRFGGVKFGEMERDCLLAHG+AANLHERLF LSDFSQMHIC+TC RVANV+ R+V  G 
Sbjct: 1124 RKRFGGVKFGEMERDCLLAHGSAANLHERLFLLSDFSQMHICQTCERVANVVMRSVPGGK 1183

Query: 718  KIRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
            KIRGPYCGFCKS+ENIVRINVPYGAKLLYQELFSMGICLKFET+VC
Sbjct: 1184 KIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGICLKFETQVC 1229


>gb|AFW59623.1| putative DNA-directed RNA polymerase subunit family protein [Zea
            mays]
          Length = 2163

 Score =  517 bits (1331), Expect = e-144
 Identities = 249/286 (87%), Positives = 266/286 (93%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTEKGMVQKV+LSANDEGKNFAVVTLRQVR+PCLGDKFSSMHGQKGVVGFLESQENFPF
Sbjct: 1878 KHTEKGMVQKVLLSANDEGKNFAVVTLRQVRTPCLGDKFSSMHGQKGVVGFLESQENFPF 1937

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T +GIVPDIVINPHAFPTRQTPGQLLEAALGKGIA  G   YATPFTT SVDVI +QLH 
Sbjct: 1938 THDGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACKGTMRYATPFTTASVDVIAEQLHK 1997

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              + RWG+E VLNGRTGE M++++F+GPTFYQRLIHMSEDKVK+RNTGPVHPLTRQPVAD
Sbjct: 1998 AGYSRWGAENVLNGRTGERMKSLVFMGPTFYQRLIHMSEDKVKYRNTGPVHPLTRQPVAD 2057

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNG- 717
            RKRFGGVKFGEMERDCLLAHG+AANLHERLF LSDFSQMHIC+TC RVANV+ R+V  G 
Sbjct: 2058 RKRFGGVKFGEMERDCLLAHGSAANLHERLFMLSDFSQMHICQTCERVANVVMRSVPGGK 2117

Query: 718  KIRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
            KIRGPYCGFCKS+ENIVRINVPYGAKLLYQELFSMGICLKFETEVC
Sbjct: 2118 KIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGICLKFETEVC 2163


>gb|AAY45706.1| RNA polymerase IV second largest subunit [Zea mays]
          Length = 1170

 Score =  517 bits (1331), Expect = e-144
 Identities = 250/286 (87%), Positives = 266/286 (93%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTEKGMVQKV+LSANDEGKNFAVVTLRQVR+PCLGDKFSSMHGQKGVVGFLESQENFPF
Sbjct: 885  KHTEKGMVQKVLLSANDEGKNFAVVTLRQVRTPCLGDKFSSMHGQKGVVGFLESQENFPF 944

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T EGIVPDIVINPHAFPTRQTPGQLLEAALGKGIA  G   YATPFTT SVDVI +QLH 
Sbjct: 945  THEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACKGTMRYATPFTTASVDVIAEQLHR 1004

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              + RWGSE VLNGRTGE +++++F+GPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD
Sbjct: 1005 AGYSRWGSENVLNGRTGERVQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 1064

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNG- 717
            RKRFGGVKFGEMERDCLLAHG+AANLHERLF LSDFSQMHIC+TC RVANV+ R+V  G 
Sbjct: 1065 RKRFGGVKFGEMERDCLLAHGSAANLHERLFLLSDFSQMHICQTCERVANVVMRSVPGGK 1124

Query: 718  KIRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
            KIRGPYCGFCKS+ENIVRINVPYGAKLLYQELFSMGICLKFET+VC
Sbjct: 1125 KIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGICLKFETQVC 1170


>ref|XP_006652896.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Oryza brachyantha]
          Length = 1250

 Score =  516 bits (1329), Expect = e-143
 Identities = 250/286 (87%), Positives = 263/286 (91%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTEKGMVQ+V+LSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGV+GFLESQENFPF
Sbjct: 965  KHTEKGMVQRVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVIGFLESQENFPF 1024

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T +GIVPDIVINPHAFPTRQTPGQLLEAALGKGIA GG   YATPFTT S DVITDQLH 
Sbjct: 1025 TCQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHK 1084

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              F RWG+E VLNGRTGE M ++IF+GP FYQRLIHM+EDKVKFRNTGPVHPLTRQPVAD
Sbjct: 1085 AGFSRWGAESVLNGRTGERMHSLIFMGPNFYQRLIHMAEDKVKFRNTGPVHPLTRQPVAD 1144

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNG- 717
            RKRFGGVKFGEMERDCLLAHGAAANLHERLF LSDFSQMHIC+TC RVANVI R V  G 
Sbjct: 1145 RKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICQTCERVANVIMRPVPGGK 1204

Query: 718  KIRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
            KIRGPYCGFC+S+ENI RINVPYGAKLLYQELFSMGICL+FETEVC
Sbjct: 1205 KIRGPYCGFCRSSENIARINVPYGAKLLYQELFSMGICLRFETEVC 1250


>ref|XP_009413518.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Musa
            acuminata subsp. malaccensis]
            gi|695051016|ref|XP_009413519.1| PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Musa acuminata
            subsp. malaccensis]
          Length = 1198

 Score =  509 bits (1312), Expect = e-141
 Identities = 249/286 (87%), Positives = 260/286 (90%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGV+GFLE+QENFPF
Sbjct: 913  KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVIGFLETQENFPF 972

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T +GIVPDIVINPHAFPTRQTPGQLLEAALGKGIA  G   YATPF+T SVD IT QLH 
Sbjct: 973  THQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACEGSKRYATPFSTASVDDITAQLHR 1032

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              + RWGSERVLNGRTGE+M +MIF+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVAD
Sbjct: 1033 AGYSRWGSERVLNGRTGEMMHSMIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVAD 1092

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNG- 717
            RKRFGGVKFGEMERDCLLAHGAAANLHERLF LSDF QMHIC+ C R  NVI R V  G 
Sbjct: 1093 RKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFFQMHICQKCQRAVNVILRPVPGGK 1152

Query: 718  KIRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
            KIRGPYCGFC+S ENIVRINVPYGAKLLYQELFSMGICLKFETEVC
Sbjct: 1153 KIRGPYCGFCQSGENIVRINVPYGAKLLYQELFSMGICLKFETEVC 1198


>ref|XP_010275247.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nelumbo nucifera]
          Length = 1201

 Score =  500 bits (1288), Expect = e-139
 Identities = 242/286 (84%), Positives = 262/286 (91%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTE+G VQKVVLSAND+GKNFAVV+LRQVRSP LGDKFSSMHGQKGV+GFLESQENFPF
Sbjct: 916  KHTERGKVQKVVLSANDDGKNFAVVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPF 975

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T +GIVPDIVINPHAFPTRQTPGQLLEAALGKGIA GG   YATP+T  S+DVITDQLH 
Sbjct: 976  TLQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACGGSMRYATPYTAASIDVITDQLHR 1035

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              + RWGSER+ NGRTGE+MR++IF+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPV+D
Sbjct: 1036 AGYSRWGSERIYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSD 1095

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNG- 717
            RKRFGGVKFGEMERDCLLAHGAAANLHERLF LSDFSQMHICR C+ +ANVIQR V  G 
Sbjct: 1096 RKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICRKCTNLANVIQRPVPGGK 1155

Query: 718  KIRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
            KIRGPYC FC+SAENIVR+NVPYGAKLL QELFSMGI +KFETEVC
Sbjct: 1156 KIRGPYCRFCESAENIVRVNVPYGAKLLCQELFSMGISVKFETEVC 1201


>ref|XP_008452849.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Cucumis melo]
          Length = 1197

 Score =  497 bits (1279), Expect = e-138
 Identities = 237/286 (82%), Positives = 265/286 (92%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTEKGMVQKVVLS+ND+GKN+AVV+LRQVRSPCLGDKFSSMHGQKGV+GFLESQENFPF
Sbjct: 912  KHTEKGMVQKVVLSSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPF 971

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T +GIVPDIVINPHAFP+RQTPGQLLEAALGKGIA+GG   YATPF+TPSVD ITDQLH 
Sbjct: 972  TIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVDAITDQLHR 1031

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              F RWGSERV NGRTGE+MR++IF+GPTFYQRLIHM+EDKVKFRNTGPVHPLTRQPVAD
Sbjct: 1032 AGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVAD 1091

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNG- 717
            RKRFGG+KFGEMERDCL+AHGA+ANLHERLFTLSD SQMH+C+ C  VA+VIQR+V+ G 
Sbjct: 1092 RKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGR 1151

Query: 718  KIRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
            KIRGPYC  C+S ++IVR+NVPYGAKLL QELFSMGI LKFET++C
Sbjct: 1152 KIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1197


>ref|XP_003564776.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Brachypodium distachyon]
          Length = 1213

 Score =  496 bits (1278), Expect = e-138
 Identities = 238/286 (83%), Positives = 259/286 (90%), Gaps = 1/286 (0%)
 Frame = +1

Query: 1    KHTEKGMVQKVVLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPF 180
            KHTEKGMVQ+V+LSANDEGKNFAVVTLRQVRSPC+GDKFSSMHGQKGV+GFLESQENFPF
Sbjct: 928  KHTEKGMVQRVLLSANDEGKNFAVVTLRQVRSPCVGDKFSSMHGQKGVIGFLESQENFPF 987

Query: 181  TSEGIVPDIVINPHAFPTRQTPGQLLEAALGKGIASGGKTTYATPFTTPSVDVITDQLHS 360
            T +GIVPD+VINPHAFPTRQTPGQLLEAALGKGIA GG   YATPFT  S++VI++QLH 
Sbjct: 988  TCQGIVPDVVINPHAFPTRQTPGQLLEAALGKGIALGGAMRYATPFTPASLEVISEQLHK 1047

Query: 361  LKFERWGSERVLNGRTGELMRAMIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVAD 540
              F R G+E V+NGRTGE M ++IF+GP FYQRL HM+EDKVKFRNTGPVHPLTRQPVAD
Sbjct: 1048 AGFSRGGAESVINGRTGERMHSLIFMGPNFYQRLTHMAEDKVKFRNTGPVHPLTRQPVAD 1107

Query: 541  RKRFGGVKFGEMERDCLLAHGAAANLHERLFTLSDFSQMHICRTCSRVANVIQRAVSNGK 720
            RKRFGGVKFGEMERDCLLAHGAAANLHERLF LSDFSQMHICRTC RVANV+ R V  GK
Sbjct: 1108 RKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHICRTCERVANVVMRGVPGGK 1167

Query: 721  -IRGPYCGFCKSAENIVRINVPYGAKLLYQELFSMGICLKFETEVC 855
             IRGPYCGFC+S+EN VRI VPYGAKLLYQELF MGICLKF+TE+C
Sbjct: 1168 RIRGPYCGFCRSSENTVRIAVPYGAKLLYQELFCMGICLKFQTEIC 1213