BLASTX nr result
ID: Anemarrhena21_contig00000824
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00000824
(827 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010268240.1| PREDICTED: DNA-directed RNA polymerases II a... 244 6e-62
ref|XP_010942742.1| PREDICTED: DNA-directed RNA polymerases II, ... 243 8e-62
ref|XP_008779392.1| PREDICTED: DNA-directed RNA polymerases II, ... 241 3e-61
ref|XP_011628850.1| PREDICTED: DNA-directed RNA polymerases II, ... 233 9e-59
ref|XP_009418594.1| PREDICTED: DNA-directed RNA polymerases II, ... 233 1e-58
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s... 221 3e-55
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi... 221 3e-55
gb|AIZ74344.1| polymerase subunit [Pinus massoniana] 221 4e-55
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ... 221 4e-55
ref|XP_011100504.1| PREDICTED: DNA-directed RNA polymerases II a... 219 2e-54
gb|ABK26380.1| unknown [Picea sitchensis] 218 3e-54
ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citr... 216 1e-53
ref|XP_012065243.1| PREDICTED: DNA-directed RNA polymerases II a... 215 2e-53
gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subun... 214 7e-53
ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III ... 213 1e-52
ref|XP_009616200.1| PREDICTED: DNA-directed RNA polymerases II a... 212 3e-52
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases II a... 212 3e-52
ref|XP_009766465.1| PREDICTED: DNA-directed RNA polymerases II a... 211 3e-52
ref|NP_175827.1| DNA-directed RNA polymerases II and V subunit 8... 211 3e-52
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ... 211 3e-52
>ref|XP_010268240.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
[Nelumbo nucifera] gi|720039239|ref|XP_010268241.1|
PREDICTED: DNA-directed RNA polymerases II and V subunit
8A-like [Nelumbo nucifera]
Length = 145
Score = 244 bits (622), Expect = 6e-62
Identities = 121/145 (83%), Positives = 131/145 (90%)
Frame = -3
Query: 714 MAALLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMVL 535
M LLFEDIF VK +DPDGKKFDKVSRIVA S+QF+M MQLDVNTE+YPLRV DKFTMVL
Sbjct: 1 MVDLLFEDIFTVKQIDPDGKKFDKVSRIVATSEQFDMYMQLDVNTEIYPLRVDDKFTMVL 60
Query: 534 APTLSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSDGKVKVDIYASFGGLLM 355
APTLSLDGTPD+GYY RKSLADKFEYVMHGKLYKISEEGS VKV+IYAS+GGLLM
Sbjct: 61 APTLSLDGTPDSGYYTQVGRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYASYGGLLM 120
Query: 354 MLRGDPSNASNFELDQRLFLLMRKV 280
+L+GDPSNA+NFELDQRLFLLMRKV
Sbjct: 121 LLKGDPSNAANFELDQRLFLLMRKV 145
>ref|XP_010942742.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Elaeis guineensis]
Length = 145
Score = 243 bits (621), Expect = 8e-62
Identities = 121/145 (83%), Positives = 130/145 (89%)
Frame = -3
Query: 714 MAALLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMVL 535
M LLFEDIF + +DPDGKKFDKVSRI A S+QF+M MQLDVNTE+YPL VGDKFTMVL
Sbjct: 1 MVELLFEDIFTLTRIDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLHVGDKFTMVL 60
Query: 534 APTLSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSDGKVKVDIYASFGGLLM 355
APTLSLDGTPD+GYYM G RKSLADKFEYVMHGKLYKISEE S VKV+IYASFGGLLM
Sbjct: 61 APTLSLDGTPDSGYYMQGQRKSLADKFEYVMHGKLYKISEESSGPNVKVEIYASFGGLLM 120
Query: 354 MLRGDPSNASNFELDQRLFLLMRKV 280
ML+GDPSNA+NFELDQRLFLLMRKV
Sbjct: 121 MLKGDPSNATNFELDQRLFLLMRKV 145
>ref|XP_008779392.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Phoenix dactylifera]
Length = 145
Score = 241 bits (616), Expect = 3e-61
Identities = 120/145 (82%), Positives = 130/145 (89%)
Frame = -3
Query: 714 MAALLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMVL 535
M LLFEDIF + LDPDGKKFDKV+RI A S+QF+M+MQLDVNTEVYPL VGDKFTMVL
Sbjct: 1 MVELLFEDIFTLTRLDPDGKKFDKVTRIEARSEQFDMSMQLDVNTEVYPLHVGDKFTMVL 60
Query: 534 APTLSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSDGKVKVDIYASFGGLLM 355
APTLSLDGTPD+GYY G RKSLADKFEYVMHGKLYKISEE S VKV++YASFGGLLM
Sbjct: 61 APTLSLDGTPDSGYYTQGQRKSLADKFEYVMHGKLYKISEESSGPNVKVELYASFGGLLM 120
Query: 354 MLRGDPSNASNFELDQRLFLLMRKV 280
ML+GDPSNA+NFELDQRLFLLMRKV
Sbjct: 121 MLKGDPSNATNFELDQRLFLLMRKV 145
>ref|XP_011628850.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B
[Amborella trichopoda] gi|769794061|ref|XP_011628851.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B [Amborella trichopoda]
Length = 144
Score = 233 bits (595), Expect = 9e-59
Identities = 120/145 (82%), Positives = 128/145 (88%)
Frame = -3
Query: 714 MAALLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMVL 535
M LLFEDIF + L+PDGKKFDKVSRI A S+QF+M MQLDVNTEVYPL VGDKFTMVL
Sbjct: 1 MVELLFEDIFTLTKLNPDGKKFDKVSRIEARSEQFDMFMQLDVNTEVYPLNVGDKFTMVL 60
Query: 534 APTLSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSDGKVKVDIYASFGGLLM 355
APTLSLDGTPDTGY+ G RKSLADKFEYVMHGKLYKISE+ S VKV+IYASFGGLLM
Sbjct: 61 APTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYKISED-SGTNVKVEIYASFGGLLM 119
Query: 354 MLRGDPSNASNFELDQRLFLLMRKV 280
+LRGDPSNA NFELDQRLFLLMRKV
Sbjct: 120 LLRGDPSNAVNFELDQRLFLLMRKV 144
>ref|XP_009418594.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Musa acuminata subsp. malaccensis]
Length = 146
Score = 233 bits (594), Expect = 1e-58
Identities = 118/146 (80%), Positives = 127/146 (86%), Gaps = 1/146 (0%)
Frame = -3
Query: 714 MAALLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMVL 535
M LLFEDIF + LDPDGKKFDKVSRI A S+QF+M MQLDVNTE+YPL VGDKFTMVL
Sbjct: 1 MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNVGDKFTMVL 60
Query: 534 APTLSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSDG-KVKVDIYASFGGLL 358
PTLSLDGTPD+GY+ RKSLADKFEYVMHGKLYKISEE S G VKV+IYASFGGLL
Sbjct: 61 TPTLSLDGTPDSGYFTQAGRKSLADKFEYVMHGKLYKISEEASGGPNVKVEIYASFGGLL 120
Query: 357 MMLRGDPSNASNFELDQRLFLLMRKV 280
MML+GDPSNA+ FELDQRLFLLMRKV
Sbjct: 121 MMLKGDPSNAAQFELDQRLFLLMRKV 146
>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
sativa Japonica Group]
Length = 396
Score = 221 bits (564), Expect = 3e-55
Identities = 110/147 (74%), Positives = 128/147 (87%), Gaps = 1/147 (0%)
Frame = -3
Query: 717 RMAALLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMV 538
+M LFEDIF V LDPDGKKFD+VSRI A S+QF+M MQLDV TEVYP+R GD+FTMV
Sbjct: 250 KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 309
Query: 537 LAPTLSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSDGK-VKVDIYASFGGL 361
LAPTL+LDGTPDTG+Y RK+LADKF+YVMHGKLYKISE+ S G+ KV+IYASFGGL
Sbjct: 310 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 369
Query: 360 LMMLRGDPSNASNFELDQRLFLLMRKV 280
LMML+GDPS+A++FELDQRLFLL+RKV
Sbjct: 370 LMMLKGDPSSAASFELDQRLFLLIRKV 396
>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
gi|125598367|gb|EAZ38147.1| hypothetical protein
OsJ_22498 [Oryza sativa Japonica Group]
Length = 191
Score = 221 bits (564), Expect = 3e-55
Identities = 110/147 (74%), Positives = 128/147 (87%), Gaps = 1/147 (0%)
Frame = -3
Query: 717 RMAALLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMV 538
+M LFEDIF V LDPDGKKFD+VSRI A S+QF+M MQLDV TEVYP+R GD+FTMV
Sbjct: 45 KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 104
Query: 537 LAPTLSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSDGK-VKVDIYASFGGL 361
LAPTL+LDGTPDTG+Y RK+LADKF+YVMHGKLYKISE+ S G+ KV+IYASFGGL
Sbjct: 105 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 164
Query: 360 LMMLRGDPSNASNFELDQRLFLLMRKV 280
LMML+GDPS+A++FELDQRLFLL+RKV
Sbjct: 165 LMMLKGDPSSAASFELDQRLFLLIRKV 191
>gb|AIZ74344.1| polymerase subunit [Pinus massoniana]
Length = 145
Score = 221 bits (563), Expect = 4e-55
Identities = 109/145 (75%), Positives = 124/145 (85%)
Frame = -3
Query: 714 MAALLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMVL 535
M LLFEDIF V +DPDGKKFDKVSRI A S+QF+M M LDVN +VYP+ VG+KF + L
Sbjct: 1 MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60
Query: 534 APTLSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSDGKVKVDIYASFGGLLM 355
APTL+LDGTPD GY++ G RKSLADK+EYVM+GKLYKISEEGS VKV+I ASFGGLLM
Sbjct: 61 APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYKISEEGSGANVKVEINASFGGLLM 120
Query: 354 MLRGDPSNASNFELDQRLFLLMRKV 280
+L+GDPSNA NFELDQRLFLLMRKV
Sbjct: 121 LLKGDPSNAGNFELDQRLFLLMRKV 145
>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like isoform X1 [Oryza brachyantha]
gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X2
[Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X3 [Oryza brachyantha]
gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X4
[Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X5 [Oryza brachyantha]
Length = 146
Score = 221 bits (563), Expect = 4e-55
Identities = 111/146 (76%), Positives = 126/146 (86%), Gaps = 1/146 (0%)
Frame = -3
Query: 714 MAALLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMVL 535
M LFEDIF V LDPDGKKFD+VSRI A S+QF+M MQLDV TEVYP+R GDKFTMVL
Sbjct: 1 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRPGDKFTMVL 60
Query: 534 APTLSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSDGK-VKVDIYASFGGLL 358
APTL+LDGTPD G+Y RK+LADK++YVMHGKLYKISE+GS G+ KV+IYASFGGLL
Sbjct: 61 APTLNLDGTPDIGFYTQAGRKTLADKYDYVMHGKLYKISEDGSGGQATKVEIYASFGGLL 120
Query: 357 MMLRGDPSNASNFELDQRLFLLMRKV 280
MML+GDPS A+NFELDQRLFLL+RKV
Sbjct: 121 MMLKGDPSTAANFELDQRLFLLIRKV 146
>ref|XP_011100504.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
[Sesamum indicum]
Length = 145
Score = 219 bits (557), Expect = 2e-54
Identities = 107/145 (73%), Positives = 122/145 (84%)
Frame = -3
Query: 714 MAALLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMVL 535
M LFEDIF V +DPDGKKFD+VSRI A S+QF+M + LDVN E+YP+RVG+KF MVL
Sbjct: 1 MVETLFEDIFRVDAVDPDGKKFDRVSRIAARSEQFDMLLHLDVNIEIYPMRVGEKFMMVL 60
Query: 534 APTLSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSDGKVKVDIYASFGGLLM 355
A TL+LDGTPDTGYY PG RKSLADKF+YVM GKLYKISEE + +VK DIY SFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYYTPGNRKSLADKFDYVMQGKLYKISEETREKQVKADIYVSFGGLLM 120
Query: 354 MLRGDPSNASNFELDQRLFLLMRKV 280
ML+GDPS AS FELDQRLF+L+RKV
Sbjct: 121 MLKGDPSIASRFELDQRLFILLRKV 145
>gb|ABK26380.1| unknown [Picea sitchensis]
Length = 145
Score = 218 bits (556), Expect = 3e-54
Identities = 107/145 (73%), Positives = 123/145 (84%)
Frame = -3
Query: 714 MAALLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMVL 535
M LLFEDIF V +DPDGKKFDKVSRI A S+QF+M M LDVN +VYP+ VG+KF + L
Sbjct: 1 MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60
Query: 534 APTLSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSDGKVKVDIYASFGGLLM 355
APTL+LDGTPD GY++ G RKSLADK+EYVM+GKLY +SEEGS VKV+I ASFGGLLM
Sbjct: 61 APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLLM 120
Query: 354 MLRGDPSNASNFELDQRLFLLMRKV 280
+L+GDPSNA NFELDQRLFLLMRKV
Sbjct: 121 LLKGDPSNAGNFELDQRLFLLMRKV 145
>ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citrus clementina]
gi|568850174|ref|XP_006478800.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like [Citrus
sinensis] gi|557545143|gb|ESR56121.1| hypothetical
protein CICLE_v10022723mg [Citrus clementina]
gi|641833409|gb|KDO52423.1| hypothetical protein
CISIN_1g032138mg [Citrus sinensis]
Length = 146
Score = 216 bits (551), Expect = 1e-53
Identities = 104/142 (73%), Positives = 123/142 (86%)
Frame = -3
Query: 705 LLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMVLAPT 526
+LFEDIF V+ +DPDGKKFDKVSRI A SQ +M M LDVN+E+YP+RVGDKFTM LA T
Sbjct: 5 VLFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHT 64
Query: 525 LSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSDGKVKVDIYASFGGLLMMLR 346
L+LDGTPDTGYY PGARK+LADK+EY+MHGKL+KI +EGS +K +IY S+GGLLMML+
Sbjct: 65 LNLDGTPDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLLMMLK 124
Query: 345 GDPSNASNFELDQRLFLLMRKV 280
GDPS S+FELDQRLFLLMRK+
Sbjct: 125 GDPSYVSHFELDQRLFLLMRKL 146
>ref|XP_012065243.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
[Jatropha curcas] gi|643737893|gb|KDP43918.1|
hypothetical protein JCGZ_20928 [Jatropha curcas]
Length = 146
Score = 215 bits (548), Expect = 2e-53
Identities = 105/142 (73%), Positives = 121/142 (85%)
Frame = -3
Query: 705 LLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMVLAPT 526
LLFEDIF V LDPDGKKFDKVSRI A SQ +M M LDVN+E+YP+ VGDKFTM LA T
Sbjct: 5 LLFEDIFVVDKLDPDGKKFDKVSRIEAHSQNCDMFMHLDVNSEIYPMAVGDKFTMALAHT 64
Query: 525 LSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSDGKVKVDIYASFGGLLMMLR 346
L+LDGTPDTGYY GARK+LADK+EY+MHGKLYKISEEGS VK +I+ S+GGLLMML+
Sbjct: 65 LNLDGTPDTGYYTQGARKTLADKYEYIMHGKLYKISEEGSGRNVKAEIFVSYGGLLMMLK 124
Query: 345 GDPSNASNFELDQRLFLLMRKV 280
GDPS+ + FELDQRLFLL+RK+
Sbjct: 125 GDPSHVNQFELDQRLFLLIRKL 146
>gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3
[Aegilops tauschii]
Length = 220
Score = 214 bits (544), Expect = 7e-53
Identities = 105/148 (70%), Positives = 125/148 (84%), Gaps = 3/148 (2%)
Frame = -3
Query: 714 MAALLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMVL 535
MA LFEDIF V +DPDGKKFD+V+RI A S+Q EM MQLD+ T+VYP+ +GDKFTMVL
Sbjct: 1 MAEHLFEDIFHVTRIDPDGKKFDRVNRIEARSEQLEMYMQLDIATDVYPMHMGDKFTMVL 60
Query: 534 APTLSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSD---GKVKVDIYASFGG 364
APTL+LDGTPDTGYY RK+LADK++YVMHGKLYKISE+ S G KV+IYASFGG
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDNSSKDKGPTKVEIYASFGG 120
Query: 363 LLMMLRGDPSNASNFELDQRLFLLMRKV 280
LLM+L+GDPS+A+N ELDQ+LFLL+RKV
Sbjct: 121 LLMLLKGDPSSAANLELDQKLFLLIRKV 148
>ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide,
putative [Ricinus communis] gi|223530164|gb|EEF32075.1|
DNA-directed RNA polymerases I, II, and III 17.1 kDa
polypeptide, putative [Ricinus communis]
Length = 146
Score = 213 bits (542), Expect = 1e-52
Identities = 105/142 (73%), Positives = 121/142 (85%)
Frame = -3
Query: 705 LLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMVLAPT 526
+LFEDIF V LDPDGKKFDKVSRI A SQ +M M LDVNTE+YP+ VGDKFTM LA T
Sbjct: 5 VLFEDIFVVDKLDPDGKKFDKVSRIEAHSQNCDMFMHLDVNTEIYPMAVGDKFTMALAHT 64
Query: 525 LSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSDGKVKVDIYASFGGLLMMLR 346
L+LDGTPDTGYY GARK+LADK+EY+M+GKLYKISEEGS VK ++ S+GGLLM+LR
Sbjct: 65 LNLDGTPDTGYYTQGARKTLADKYEYIMNGKLYKISEEGSGKAVKAEMLVSYGGLLMLLR 124
Query: 345 GDPSNASNFELDQRLFLLMRKV 280
GDPS+ S+FELDQRLFLLMRK+
Sbjct: 125 GDPSHVSHFELDQRLFLLMRKL 146
>ref|XP_009616200.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
[Nicotiana tomentosiformis]
gi|697124414|ref|XP_009616201.1| PREDICTED: DNA-directed
RNA polymerases II and V subunit 8A-like [Nicotiana
tomentosiformis] gi|697124416|ref|XP_009616202.1|
PREDICTED: DNA-directed RNA polymerases II and V subunit
8A-like [Nicotiana tomentosiformis]
Length = 145
Score = 212 bits (539), Expect = 3e-52
Identities = 105/145 (72%), Positives = 121/145 (83%)
Frame = -3
Query: 714 MAALLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMVL 535
M LFEDIF V DPDGKKFD+V+RI A S+QF+M M LDVNTE+YP+RV +KF MVL
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMYMLLDVNTEIYPMRVKEKFMMVL 60
Query: 534 APTLSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSDGKVKVDIYASFGGLLM 355
A TL+LDGTPDTGY++ G +KSLADKFEYVMHGKLY+ISEEGS VK DI+ SFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 354 MLRGDPSNASNFELDQRLFLLMRKV 280
LRGDPS A+ FELDQ+LFLL+RKV
Sbjct: 121 QLRGDPSIAAKFELDQKLFLLLRKV 145
>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
[Solanum lycopersicum] gi|460377396|ref|XP_004234479.1|
PREDICTED: DNA-directed RNA polymerases II and V subunit
8A-like [Solanum lycopersicum]
Length = 145
Score = 212 bits (539), Expect = 3e-52
Identities = 105/145 (72%), Positives = 121/145 (83%)
Frame = -3
Query: 714 MAALLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMVL 535
M LFEDIF V DPDGKKFD+V+RI A S+QF+M M LDVNTE+YP+RV DKF MVL
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVL 60
Query: 534 APTLSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSDGKVKVDIYASFGGLLM 355
A TL+LDGTPDTGY++ G +KSLADKFEYVMHGKLY+ISEEGS VK DI+ SFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 354 MLRGDPSNASNFELDQRLFLLMRKV 280
LRGDPS A+ FELDQ++FLL+RKV
Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145
>ref|XP_009766465.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
[Nicotiana sylvestris]
Length = 145
Score = 211 bits (538), Expect = 3e-52
Identities = 104/145 (71%), Positives = 121/145 (83%)
Frame = -3
Query: 714 MAALLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMVL 535
M LFEDIF V DPDGKKFD+V+RI A S+QF+M M LDVNTE+YP+RV +KF MVL
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMYMLLDVNTEIYPMRVKEKFMMVL 60
Query: 534 APTLSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSDGKVKVDIYASFGGLLM 355
A TL+LDGTPDTGY++ G +KSLADKFEY+MHGKLY+ISEEGS VK DI+ SFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYIMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 354 MLRGDPSNASNFELDQRLFLLMRKV 280
LRGDPS A+ FELDQ+LFLL+RKV
Sbjct: 121 QLRGDPSIAAKFELDQKLFLLLRKV 145
>ref|NP_175827.1| DNA-directed RNA polymerases II and V subunit 8A [Arabidopsis
thaliana] gi|75100070|sp|O81097.1|RPB8A_ARATH RecName:
Full=DNA-directed RNA polymerases II and V subunit 8A;
AltName: Full=RNA polymerase I, II and III 16.5 kDa
subunit; Short=AtRPABC16.5
gi|4585968|gb|AAD25604.1|AC005287_6 RNA polymerase I, II
and III 16.5 kDa subunit [Arabidopsis thaliana]
gi|3372230|gb|AAC28252.1| RNA polymerase I, II and III
16.5 kDa subunit [Arabidopsis thaliana]
gi|21555812|gb|AAM63939.1| RNA polymerase II subunit,
putative [Arabidopsis thaliana]
gi|28466897|gb|AAO44057.1| At1g54250 [Arabidopsis
thaliana] gi|110735704|dbj|BAE99832.1| RNA polymerase I,
II and III 16.5 kDa subunit [Arabidopsis thaliana]
gi|332194950|gb|AEE33071.1| RNA polymerase Rpb8
[Arabidopsis thaliana]
Length = 146
Score = 211 bits (538), Expect = 3e-52
Identities = 104/143 (72%), Positives = 122/143 (85%), Gaps = 1/143 (0%)
Frame = -3
Query: 705 LLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMVLAPT 526
+LFEDIF V LDPDGKKFDKV+R+ A S EM M LDVNTEVYPL VGDKFT+ LAPT
Sbjct: 6 ILFEDIFVVDQLDPDGKKFDKVTRVQATSHNLEMFMHLDVNTEVYPLAVGDKFTLALAPT 65
Query: 525 LSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSDGKV-KVDIYASFGGLLMML 349
L+LDGTPDTGY+ PGA+K+LADK+EY+MHGKLYKISE DGK K ++Y SFGGLLM+L
Sbjct: 66 LNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKISER--DGKTPKAELYVSFGGLLMLL 123
Query: 348 RGDPSNASNFELDQRLFLLMRKV 280
+GDP++ S+FELDQRLFLLMRK+
Sbjct: 124 KGDPAHISHFELDQRLFLLMRKL 146
>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Solanum tuberosum]
Length = 145
Score = 211 bits (538), Expect = 3e-52
Identities = 104/145 (71%), Positives = 121/145 (83%)
Frame = -3
Query: 714 MAALLFEDIFEVKGLDPDGKKFDKVSRIVADSQQFEMNMQLDVNTEVYPLRVGDKFTMVL 535
M LFEDIF V DPDGKKFD+V+RI A S+QF+M M LD+NTE+YP+RV DKF MVL
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKDKFMMVL 60
Query: 534 APTLSLDGTPDTGYYMPGARKSLADKFEYVMHGKLYKISEEGSDGKVKVDIYASFGGLLM 355
A TL+LDGTPDTGY++ G +KSLADKFEYVMHGKLY+ISEEGS VK DI+ SFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 354 MLRGDPSNASNFELDQRLFLLMRKV 280
LRGDPS A+ FELDQ++FLL+RKV
Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145