BLASTX nr result
ID: Alisma22_contig00044559
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00044559
(363 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP37955.1 Retrovirus-related Pol polyprotein from transposon TN... 45 9e-07
KYP63559.1 Retrovirus-related Pol polyprotein from transposon TN... 47 1e-06
KYP74957.1 Retrovirus-related Pol polyprotein from transposon TN... 45 1e-06
KYP78386.1 Retrovirus-related Pol polyprotein from transposon TN... 44 2e-06
KYP34536.1 Retrovirus-related Pol polyprotein from transposon TN... 44 2e-06
KYP34729.1 Retrovirus-related Pol polyprotein from transposon TN... 49 7e-06
KYP40247.1 Retrovirus-related Pol polyprotein from transposon TN... 47 9e-06
KYP48169.1 Retrovirus-related Pol polyprotein from transposon TN... 41 9e-06
>KYP37955.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 193
Score = 45.4 bits (106), Expect(2) = 9e-07
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 223 QLGKHHRTSFPSHTSIKSTLLFELVHSDICGPFRIQSYNNYRY 351
QLGKH R+SFP T + +F +HSDI GP R+ S+ +RY
Sbjct: 143 QLGKHVRSSFPKQTDKRCNSIFTTIHSDIWGPSRVTSF-GFRY 184
Score = 34.7 bits (78), Expect(2) = 9e-07
Identities = 20/73 (27%), Positives = 27/73 (36%)
Frame = +3
Query: 15 IQDSRLLKTIGSDPRLGDLYYFPSSTPGSVFVACSPLQLHQCYGHXXXXXXXXXXXXXXX 194
IQ+ + IG+ G LYYF P S SP LH GH
Sbjct: 74 IQERGTSRKIGAGHESGGLYYFEMQPPVSCVAVLSPKLLHDRLGHPSLSKLKLLVPSLQK 133
Query: 195 VQHIFCDYCSVRK 233
+ + C+ C + K
Sbjct: 134 LAELGCESCQLGK 146
>KYP63559.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1378
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 223 QLGKHHRTSFPSHTSIKSTLLFELVHSDICGPFRIQSYNNYRY 351
QLGKH R+SFP T + F ++HSDI GP R+ S+ +RY
Sbjct: 481 QLGKHVRSSFPKRTETRCNSAFSIIHSDIWGPSRVTSF-GFRY 522
Score = 33.1 bits (74), Expect(2) = 1e-06
Identities = 20/73 (27%), Positives = 29/73 (39%)
Frame = +3
Query: 15 IQDSRLLKTIGSDPRLGDLYYFPSSTPGSVFVACSPLQLHQCYGHXXXXXXXXXXXXXXX 194
IQ+ + IG LYYF +S S F + +P LH GH
Sbjct: 412 IQERGTGRLIGGGHESRGLYYFETSPSVSCFASSTPKLLHDRLGHPHLTKLKKMVPSLNK 471
Query: 195 VQHIFCDYCSVRK 233
+Q + C+ C + K
Sbjct: 472 LQALECESCQLGK 484
>KYP74957.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1122
Score = 45.4 bits (106), Expect(2) = 1e-06
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 223 QLGKHHRTSFPSHTSIKSTLLFELVHSDICGPFRIQSYNNYRY 351
QLGKH R+SFP T + +F +HSDI GP R+ S+ +RY
Sbjct: 801 QLGKHVRSSFPKQTDKRCNSIFTTIHSDIWGPSRVTSF-GFRY 842
Score = 33.9 bits (76), Expect(2) = 1e-06
Identities = 20/73 (27%), Positives = 27/73 (36%)
Frame = +3
Query: 15 IQDSRLLKTIGSDPRLGDLYYFPSSTPGSVFVACSPLQLHQCYGHXXXXXXXXXXXXXXX 194
IQ+ + IG+ G LYYF P S SP LH GH
Sbjct: 732 IQERGTGRKIGAGHESGGLYYFEMQPPVSCVAVLSPKLLHDRLGHPCLSKLKLLVPSLQK 791
Query: 195 VQHIFCDYCSVRK 233
+ + C+ C + K
Sbjct: 792 LAELGCESCQLGK 804
>KYP78386.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 610
Score = 44.3 bits (103), Expect(2) = 2e-06
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1
Query: 223 QLGKHHRTSFPSHTSIKSTLLFELVHSDICGPFRIQSY 336
QLGKH R+SFP T + +F +HSDI GP R+ S+
Sbjct: 239 QLGKHVRSSFPKQTDKRCNSIFTTIHSDIWGPSRVTSF 276
Score = 34.7 bits (78), Expect(2) = 2e-06
Identities = 20/73 (27%), Positives = 29/73 (39%)
Frame = +3
Query: 15 IQDSRLLKTIGSDPRLGDLYYFPSSTPGSVFVACSPLQLHQCYGHXXXXXXXXXXXXXXX 194
IQ+ + IG+ LYYF + P S V SP LH GH
Sbjct: 170 IQERGTGRKIGAGHESSGLYYFETQPPISFVVVLSPKLLHDRLGHPSLSKLKLLVPSLKN 229
Query: 195 VQHIFCDYCSVRK 233
++ + C+ C + K
Sbjct: 230 LEELGCESCQLGK 242
>KYP34536.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 372
Score = 43.5 bits (101), Expect(2) = 2e-06
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +1
Query: 223 QLGKHHRTSFPSHTSIKSTLLFELVHSDICGPFRIQSYNNYRY 351
QLGKH R+SFP T + +F +HSDI GP + S+ +RY
Sbjct: 82 QLGKHVRSSFPKQTDKRCNSIFTTIHSDIWGPSHVTSF-GFRY 123
Score = 35.0 bits (79), Expect(2) = 2e-06
Identities = 20/73 (27%), Positives = 28/73 (38%)
Frame = +3
Query: 15 IQDSRLLKTIGSDPRLGDLYYFPSSTPGSVFVACSPLQLHQCYGHXXXXXXXXXXXXXXX 194
IQ+ + IG+ G LYYF P S SP LH GH
Sbjct: 13 IQERGTGRKIGAGHESGGLYYFEMQPPVSCVAVLSPKLLHDRLGHPSLSKLKLLVPSLQK 72
Query: 195 VQHIFCDYCSVRK 233
++ + C+ C + K
Sbjct: 73 LEELGCESCQLGK 85
>KYP34729.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1180
Score = 48.5 bits (114), Expect(2) = 7e-06
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +1
Query: 223 QLGKHHRTSFPSHTSIKSTLLFELVHSDICGPFRIQSYNNYRY 351
QLGKH R SFP+ + ++ LF+++HSD+ GP R+ S +RY
Sbjct: 297 QLGKHVRASFPNSVNSRAMCLFDVIHSDVWGPSRVPSLLGHRY 339
Score = 28.5 bits (62), Expect(2) = 7e-06
Identities = 19/73 (26%), Positives = 28/73 (38%)
Frame = +3
Query: 15 IQDSRLLKTIGSDPRLGDLYYFPSSTPGSVFVACSPLQLHQCYGHXXXXXXXXXXXXXXX 194
IQD +TIG+ LYY ST SP +H+ GH
Sbjct: 228 IQDRSTGQTIGAGSESHGLYYLQPSTSTICASIESPGLIHRRLGHPSLNKLKKMVPHLSR 287
Query: 195 VQHIFCDYCSVRK 233
++ + C+ C + K
Sbjct: 288 LESLECESCQLGK 300
>KYP40247.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 385
Score = 47.4 bits (111), Expect(2) = 9e-06
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +1
Query: 223 QLGKHHRTSFPSHTSIKSTLLFELVHSDICGPFRIQSYNNYRY 351
QLGKH RTSFP+ + ++ F+++HSD+ GP R+ S +RY
Sbjct: 223 QLGKHVRTSFPNSINSRAVSPFDVIHSDVWGPSRVPSLLGHRY 265
Score = 29.3 bits (64), Expect(2) = 9e-06
Identities = 19/73 (26%), Positives = 28/73 (38%)
Frame = +3
Query: 15 IQDSRLLKTIGSDPRLGDLYYFPSSTPGSVFVACSPLQLHQCYGHXXXXXXXXXXXXXXX 194
IQD +TIG + LYY ST SP +H+ GH
Sbjct: 154 IQDRSTGQTIGVGSKSHGLYYLQPSTSTICASVESPSLIHRRLGHPSLNKLKKMVPHLSC 213
Query: 195 VQHIFCDYCSVRK 233
++ + C+ C + K
Sbjct: 214 LESLECESCQLGK 226
>KYP48169.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 224
Score = 41.2 bits (95), Expect(2) = 9e-06
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +1
Query: 223 QLGKHHRTSFPSHTSIKSTLLFELVHSDICGPFRIQSYNNYRY 351
QLGKH R SFP T + +F +H DI GP + S+ +RY
Sbjct: 143 QLGKHVRPSFPKQTDTRCNSIFTTIHFDIWGPSHVTSF-GFRY 184
Score = 35.4 bits (80), Expect(2) = 9e-06
Identities = 20/73 (27%), Positives = 29/73 (39%)
Frame = +3
Query: 15 IQDSRLLKTIGSDPRLGDLYYFPSSTPGSVFVACSPLQLHQCYGHXXXXXXXXXXXXXXX 194
IQ+ + IG+ LYYF + P S V SP LH GH
Sbjct: 74 IQERGTGRKIGAGHESSGLYYFETQPPVSCVVVLSPTLLHDRLGHPSLSKLKLLVPSLKN 133
Query: 195 VQHIFCDYCSVRK 233
++ + C+ C + K
Sbjct: 134 LEELGCESCQLGK 146