BLASTX nr result

ID: Alisma22_contig00043913 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00043913
         (296 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAP74537.1 putative TdLSC28 protein (SMC6), partial [Triticum tu...    52   3e-06
EMT09192.1 Structural maintenance of chromosomes protein 6 [Aegi...    54   3e-06
XP_010258922.1 PREDICTED: structural maintenance of chromosomes ...    54   4e-06
XP_010258920.1 PREDICTED: structural maintenance of chromosomes ...    54   4e-06
XP_020155978.1 structural maintenance of chromosomes protein 6B-...    52   1e-05
XP_009400681.1 PREDICTED: structural maintenance of chromosomes ...    52   1e-05

>CAP74537.1 putative TdLSC28 protein (SMC6), partial [Triticum turgidum subsp.
           durum]
          Length = 155

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 21/27 (77%), Positives = 25/27 (92%)
 Frame = -2

Query: 295 WIFITPHDISMVKPGKKVKKHELAAPR 215
           W+FITPHDISMVKPG +VKK ++AAPR
Sbjct: 128 WVFITPHDISMVKPGDRVKKQQMAAPR 154


>EMT09192.1 Structural maintenance of chromosomes protein 6 [Aegilops tauschii]
          Length = 329

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -2

Query: 295 WIFITPHDISMVKPGKKVKKHELAAPR 215
           WIFITPHDISMVKPG +VKK +LAAPR
Sbjct: 302 WIFITPHDISMVKPGDRVKKQQLAAPR 328


>XP_010258922.1 PREDICTED: structural maintenance of chromosomes protein 6B-like
           isoform X2 [Nelumbo nucifera]
          Length = 898

 Score = 53.5 bits (127), Expect = 4e-06
 Identities = 22/27 (81%), Positives = 26/27 (96%)
 Frame = -2

Query: 295 WIFITPHDISMVKPGKKVKKHELAAPR 215
           WIFITPHDISMVKPG++VKK ++AAPR
Sbjct: 871 WIFITPHDISMVKPGERVKKQQMAAPR 897


>XP_010258920.1 PREDICTED: structural maintenance of chromosomes protein 6B-like
            isoform X1 [Nelumbo nucifera]
          Length = 1056

 Score = 53.5 bits (127), Expect = 4e-06
 Identities = 22/27 (81%), Positives = 26/27 (96%)
 Frame = -2

Query: 295  WIFITPHDISMVKPGKKVKKHELAAPR 215
            WIFITPHDISMVKPG++VKK ++AAPR
Sbjct: 1029 WIFITPHDISMVKPGERVKKQQMAAPR 1055


>XP_020155978.1 structural maintenance of chromosomes protein 6B-like [Aegilops
            tauschii subsp. tauschii]
          Length = 1039

 Score = 52.4 bits (124), Expect = 1e-05
 Identities = 21/27 (77%), Positives = 25/27 (92%)
 Frame = -2

Query: 295  WIFITPHDISMVKPGKKVKKHELAAPR 215
            W+FITPHDISMVKPG +VKK ++AAPR
Sbjct: 1012 WVFITPHDISMVKPGDRVKKQQMAAPR 1038


>XP_009400681.1 PREDICTED: structural maintenance of chromosomes protein 6B-like
            [Musa acuminata subsp. malaccensis]
          Length = 1059

 Score = 52.4 bits (124), Expect = 1e-05
 Identities = 21/27 (77%), Positives = 26/27 (96%)
 Frame = -2

Query: 295  WIFITPHDISMVKPGKKVKKHELAAPR 215
            WIFITPHDISMVKPG++V+K ++AAPR
Sbjct: 1032 WIFITPHDISMVKPGERVRKQQIAAPR 1058


Top