BLASTX nr result
ID: Alisma22_contig00043674
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00043674
(223 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAU43956.1 unknown protein [Oryza sativa Japonica Group] AAU4406... 63 6e-10
AAT85031.1 putative polyprotein [Oryza sativa Japonica Group] AB... 61 3e-09
ABA94875.1 retrotransposon protein, putative, Ty1-copia subclass... 60 7e-09
AAU90262.1 integrase core domain containing protein [Oryza sativ... 59 2e-08
XP_020153037.1 uncharacterized protein LOC109738351, partial [Ae... 58 3e-08
AAV44026.1 hypothetical protein [Oryza sativa Japonica Group] 58 4e-08
ABA95367.1 retrotransposon protein, putative, Ty1-copia subclass... 58 4e-08
AAK09230.1 putative copia-like retrotransposon Hopscotch polypro... 56 4e-08
EEC80484.1 hypothetical protein OsI_22718 [Oryza sativa Indica G... 58 5e-08
ABF95616.1 retrotransposon protein, putative, Ty1-copia subclass... 57 7e-08
AAR88589.1 putative copia-like retrotransposon protein [Oryza sa... 57 7e-08
XP_020188960.1 uncharacterized protein LOC109774623 [Aegilops ta... 57 9e-08
EEE57553.1 hypothetical protein OsJ_07890 [Oryza sativa Japonica... 57 1e-07
BAG98101.1 unnamed protein product [Oryza sativa Japonica Group]... 57 1e-07
AAP52546.1 retrotransposon protein, putative, Ty1-copia subclass... 57 1e-07
ABA98728.2 retrotransposon protein, putative, Ty1-copia subclass... 57 1e-07
ABG00000.1 retrotransposon protein, putative, Ty1-copia subclass... 57 1e-07
XP_015638276.1 PREDICTED: uncharacterized protein LOC4339390 [Or... 56 2e-07
AAP53968.1 retrotransposon protein, putative, Ty1-copia subclass... 56 2e-07
XP_008675545.1 PREDICTED: uncharacterized protein LOC103651643 [... 56 2e-07
>AAU43956.1 unknown protein [Oryza sativa Japonica Group] AAU44069.1 putative
polyprotein [Oryza sativa Japonica Group]
Length = 1447
Score = 63.2 bits (152), Expect = 6e-10
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAGMPILHI 88
TNW D++ TDH+T +LDK+ V D+Y+GQDQV TA GAGM I HI
Sbjct: 317 TNWYVDTSATDHVTGELDKLTVRDRYKGQDQVHTASGAGMEISHI 361
>AAT85031.1 putative polyprotein [Oryza sativa Japonica Group] ABF96679.1
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1437
Score = 61.2 bits (147), Expect = 3e-09
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAGMPILHI 88
TNW D+ TDH+T +LDK+ V DKY G DQV TA GAGM I HI
Sbjct: 317 TNWYLDTGATDHVTGELDKLTVRDKYHGNDQVHTASGAGMEISHI 361
>ABA94875.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 626
Score = 60.1 bits (144), Expect = 7e-09
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAG 106
+NW DS TDHIT++LDK+ VCDKY+G DQV TA+GAG
Sbjct: 120 SNWYMDSGATDHITNELDKLTVCDKYKGNDQVHTANGAG 158
>AAU90262.1 integrase core domain containing protein [Oryza sativa Japonica
Group] ABF97857.1 retrotransposon protein, putative,
Ty1-copia subclass, expressed [Oryza sativa Japonica
Group]
Length = 1021
Score = 58.9 bits (141), Expect = 2e-08
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAGMPILHI 88
TNW D+ TDHIT +LDK+ +KY G+DQ+ TA GAGM I HI
Sbjct: 314 TNWYVDTGATDHITGELDKLTTREKYNGKDQIYTASGAGMDIKHI 358
>XP_020153037.1 uncharacterized protein LOC109738351, partial [Aegilops tauschii
subsp. tauschii]
Length = 433
Score = 58.2 bits (139), Expect = 3e-08
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAGMPILHI 88
TNW D+ T+HIT +LDK+ + DKY+G DQV TA G+GM I H+
Sbjct: 323 TNWYADTGATNHITGELDKLTIRDKYRGGDQVHTASGSGMDITHV 367
>AAV44026.1 hypothetical protein [Oryza sativa Japonica Group]
Length = 760
Score = 58.2 bits (139), Expect = 4e-08
Identities = 31/64 (48%), Positives = 37/64 (57%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAGMPILHIVKFTFLLSHEFSNSK 43
TNW D+ TDHIT +LDK+ V DKY G +QV A+G GM I HI T +S K
Sbjct: 240 TNWYVDTGATDHITGELDKLTVRDKYTGNEQVHAANGTGMEISHIDHATVPISSGNLVLK 299
Query: 42 NPTY 31
N Y
Sbjct: 300 NVLY 303
>ABA95367.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 807
Score = 58.2 bits (139), Expect = 4e-08
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAGMPILHI 88
TNW DS TDHITS+LDK+ V +KY+G +++ TA+G GM I HI
Sbjct: 288 TNWYIDSGATDHITSELDKLTVREKYKGTEKIHTANGVGMQIKHI 332
>AAK09230.1 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
sativa Japonica Group] AAK72882.1 putative gag-pol
protein [Oryza sativa Japonica Group]
Length = 1219
Score = 56.2 bits (134), Expect(2) = 4e-08
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAGMPILHI 88
TNW D+ TDHIT +LDK+ +KY+G DQ+ TA G GM I HI
Sbjct: 312 TNWYVDTEATDHITGQLDKLTTREKYKGTDQIHTASGEGMDIQHI 356
Score = 28.5 bits (62), Expect(2) = 4e-08
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = -3
Query: 77 HSYYLTSSQT---QKILHIPSAHSNLIS 3
HSY TSS+ + ILH+P A NLIS
Sbjct: 358 HSYVPTSSRPLHLKNILHVPKASKNLIS 385
>EEC80484.1 hypothetical protein OsI_22718 [Oryza sativa Indica Group]
Length = 506
Score = 57.8 bits (138), Expect = 5e-08
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAGMPILHI 88
TNW D+ TDHIT++LDK+ V +KY+G D++ TA GAGM I HI
Sbjct: 308 TNWYLDTGATDHITNELDKLDVWEKYKGGDKIHTASGAGMEIKHI 352
>ABF95616.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1241
Score = 57.4 bits (137), Expect = 7e-08
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAGMPILHI 88
TNW D+ TDHIT++LDK+ V +KY+G D++ TA GAGM I HI
Sbjct: 308 TNWYLDTGATDHITNELDKLDVREKYKGGDKIHTASGAGMEIKHI 352
>AAR88589.1 putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 57.4 bits (137), Expect = 7e-08
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAGMPILHI 88
TNW D+ TDHIT++LDK+ V +KY+G D++ TA GAGM I HI
Sbjct: 286 TNWYLDTGATDHITNELDKLDVREKYKGGDKIHTASGAGMEIKHI 330
>XP_020188960.1 uncharacterized protein LOC109774623 [Aegilops tauschii subsp.
tauschii]
Length = 866
Score = 57.0 bits (136), Expect = 9e-08
Identities = 29/65 (44%), Positives = 37/65 (56%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAGMPILHIVKFTFLLSHEFSNSK 43
TNW D T+HIT +LDK+ + +KY G DQV TA G+GM I HI L + N +
Sbjct: 291 TNWYADFGATEHITGELDKLTMREKYHGGDQVHTASGSGMDITHIGNSIVLEENGEENDQ 350
Query: 42 NPTYP 28
N P
Sbjct: 351 NHQNP 355
>EEE57553.1 hypothetical protein OsJ_07890 [Oryza sativa Japonica Group]
Length = 499
Score = 56.6 bits (135), Expect = 1e-07
Identities = 31/64 (48%), Positives = 36/64 (56%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAGMPILHIVKFTFLLSHEFSNSK 43
TNW D+ TDHITS LDK+ V +KY G DQV TA G+GM I I + H K
Sbjct: 193 TNWYIDTGATDHITSDLDKLTVREKYNGGDQVHTASGSGMKINQIGQSIVRTQHRDLILK 252
Query: 42 NPTY 31
N Y
Sbjct: 253 NILY 256
>BAG98101.1 unnamed protein product [Oryza sativa Japonica Group] BAS80237.1
Os02g0671800 [Oryza sativa Japonica Group]
Length = 572
Score = 56.6 bits (135), Expect = 1e-07
Identities = 31/64 (48%), Positives = 36/64 (56%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAGMPILHIVKFTFLLSHEFSNSK 43
TNW D+ TDHITS LDK+ V +KY G DQV TA G+GM I I + H K
Sbjct: 266 TNWYIDTGATDHITSDLDKLTVREKYNGGDQVHTASGSGMKINQIGQSIVRTQHRDLILK 325
Query: 42 NPTY 31
N Y
Sbjct: 326 NILY 329
>AAP52546.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group] AAX95563.1 hypothetical protein [Oryza
sativa Japonica Group]
Length = 760
Score = 56.6 bits (135), Expect = 1e-07
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAGMPILHI 88
TNW D+ TDHIT +LDK+ +KY G+DQ+ A GAGM I HI
Sbjct: 164 TNWYVDTGATDHITGELDKLTTREKYNGKDQIYMASGAGMDIKHI 208
>ABA98728.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1016
Score = 56.6 bits (135), Expect = 1e-07
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAGMPILHI 88
TNW D+ TDHIT KL+K+ +KY G++Q+ TA GAGM I H+
Sbjct: 10 TNWYMDTGATDHITGKLEKLTTHEKYNGKEQIHTASGAGMDIKHV 54
>ABG00000.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2074
Score = 56.6 bits (135), Expect = 1e-07
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAGMPILHI 88
TNW D+ TDHIT +LDK+ +KY G++Q+ TA GAGM I H+
Sbjct: 1279 TNWYMDTGATDHITGELDKLTTHEKYNGKEQIHTASGAGMDIKHV 1323
>XP_015638276.1 PREDICTED: uncharacterized protein LOC4339390 [Oryza sativa
Japonica Group] BAF18023.1 Os05g0527300 [Oryza sativa
Japonica Group] BAG91351.1 unnamed protein product
[Oryza sativa Japonica Group]
Length = 363
Score = 56.2 bits (134), Expect = 2e-07
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAG 106
TNW D++ TDH+T +LDK+ V D+Y+GQDQV TA GAG
Sbjct: 317 TNWYVDTSATDHVTGELDKLTVRDRYKGQDQVHTASGAG 355
>AAP53968.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 56.2 bits (134), Expect = 2e-07
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAGM 103
TNW DS TDHITS+LDK+ V DKY G DQV TA G+G+
Sbjct: 233 TNWYIDSGATDHITSELDKLTVKDKYAGNDQVHTASGSGV 272
>XP_008675545.1 PREDICTED: uncharacterized protein LOC103651643 [Zea mays]
Length = 270
Score = 55.8 bits (133), Expect = 2e-07
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = -2
Query: 222 TNW*TDSATTDHITSKLDKMIVCDKYQGQDQV*TADGAG 106
TNW TD+A TDH+TS+LDK+ +KY+G DQ+ TA GAG
Sbjct: 222 TNWYTDTAATDHLTSQLDKLTTHEKYKGTDQIHTASGAG 260