BLASTX nr result
ID: Alisma22_contig00043601
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Alisma22_contig00043601 (291 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ABD93733.1 RNA polymerase beta chain, partial (chloroplast) [Ali... 195 2e-56 ABD93841.1 RNA polymerase beta chain, partial (chloroplast) [Hyd... 181 1e-51 YP_009241906.1 RNA polymerase beta' subunit (plastid) [Sagittari... 166 7e-46 ABD93730.1 RNA polymerase beta chain, partial (chloroplast) [But... 160 1e-43 ABD93769.1 RNA polymerase beta chain, partial (chloroplast) [Tri... 159 2e-43 ABD93732.1 RNA polymerase beta chain, partial (chloroplast) [Pot... 154 1e-41 YP_009241821.1 RNA polymerase beta' subunit (plastid) [Potamoget... 154 2e-41 AFJ73387.1 RNA polymerase beta subunit, partial (chloroplast) [C... 153 3e-41 AFJ80061.1 RNA polymerase beta subunit, partial (chloroplast) [C... 151 1e-40 AFJ80059.1 RNA polymerase beta subunit, partial (chloroplast) [C... 151 1e-40 AFJ73386.1 RNA polymerase beta subunit, partial (chloroplast) [C... 151 1e-40 ABD93829.1 RNA polymerase beta chain, partial (chloroplast) [Ple... 151 2e-40 AFJ73383.1 RNA polymerase beta subunit, partial (chloroplast) [S... 151 2e-40 YP_009269637.1 RNA polymerase beta' subunit (chloroplast) [Epipa... 151 2e-40 YP_006665770.1 RNA polymerase beta' subunit (chloroplast) [Elode... 151 2e-40 ABD93748.1 RNA polymerase beta chain, partial (chloroplast) [Mag... 150 2e-40 YP_009026871.1 RNA polymerase beta'' subunit (plastid) [Magnolia... 150 2e-40 YP_007474442.1 RNA polymerase beta subunit-2 (chloroplast) [Magn... 150 2e-40 YP_007474360.1 RNA polymerase beta subunit-2 (chloroplast) [Magn... 150 2e-40 AFJ80063.1 RNA polymerase beta subunit, partial (chloroplast) [C... 150 3e-40 >ABD93733.1 RNA polymerase beta chain, partial (chloroplast) [Alisma plantago-aquatica] Length = 792 Score = 195 bits (495), Expect = 2e-56 Identities = 97/97 (100%), Positives = 97/97 (100%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE Sbjct: 307 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 366 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKRK 291 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKRK Sbjct: 367 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKRK 403 >ABD93841.1 RNA polymerase beta chain, partial (chloroplast) [Hydrocleys nymphoides] Length = 776 Score = 181 bits (460), Expect = 1e-51 Identities = 92/96 (95%), Positives = 92/96 (95%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 LATFFPQDAL ERDNVQLKVVNYILY NGKPIRGIFHTSIQLVRTCLVLNWGQEK SSIE Sbjct: 291 LATFFPQDALRERDNVQLKVVNYILYANGKPIRGIFHTSIQLVRTCLVLNWGQEKNSSIE 350 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKR 288 EEV ASFVEIRTNDLIRDFIRIELVQSPISSYIVKR Sbjct: 351 EEVHASFVEIRTNDLIRDFIRIELVQSPISSYIVKR 386 >YP_009241906.1 RNA polymerase beta' subunit (plastid) [Sagittaria lichuanensis] AMQ13480.1 RNA polymerase beta' subunit (plastid) [Sagittaria lichuanensis] Length = 1564 Score = 166 bits (421), Expect = 7e-46 Identities = 86/97 (88%), Positives = 88/97 (90%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 LATFFPQDAL ERDNVQLKVVNYIL GN KPIR IFH +IQLVRTCLVLNWGQEK SS E Sbjct: 971 LATFFPQDALRERDNVQLKVVNYILDGNDKPIRRIFHPNIQLVRTCLVLNWGQEKNSSRE 1030 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKRK 291 EEV ASF+EI TNDLIRDFIRIELVQSPISSYIVKRK Sbjct: 1031 EEVYASFIEISTNDLIRDFIRIELVQSPISSYIVKRK 1067 >ABD93730.1 RNA polymerase beta chain, partial (chloroplast) [Butomus umbellatus] Length = 824 Score = 160 bits (404), Expect = 1e-43 Identities = 85/96 (88%), Positives = 87/96 (90%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 LATFFPQD L ERDNVQL+VVNYILYGNGKPIRGI+HTSIQLVRTCLVLNW QEK SI Sbjct: 306 LATFFPQDPLRERDNVQLRVVNYILYGNGKPIRGIYHTSIQLVRTCLVLNWDQEKNGSI- 364 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKR 288 EEV ASFVEIRTN LIRDFIRIELVQSPI SYIVKR Sbjct: 365 EEVHASFVEIRTNGLIRDFIRIELVQSPI-SYIVKR 399 >ABD93769.1 RNA polymerase beta chain, partial (chloroplast) [Triglochin maritima] Length = 822 Score = 159 bits (402), Expect = 2e-43 Identities = 83/97 (85%), Positives = 89/97 (91%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 L TFFP+D+L E+DNVQ +VVNYILYGNGKPIRGI+HTSIQLVRTCLVLNW QEKK SI Sbjct: 304 LTTFFPRDSLPEKDNVQFRVVNYILYGNGKPIRGIYHTSIQLVRTCLVLNWDQEKKGSI- 362 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKRK 291 EEV ASFVEIRTN+LIRDFIRIELVQSPI SYIVKRK Sbjct: 363 EEVHASFVEIRTNNLIRDFIRIELVQSPI-SYIVKRK 398 >ABD93732.1 RNA polymerase beta chain, partial (chloroplast) [Potamogeton berchtoldii] Length = 863 Score = 154 bits (389), Expect = 1e-41 Identities = 80/96 (83%), Positives = 87/96 (90%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 LAT FPQD L ERDN+QL+VVNYILYGNGKPIRGI+ TSIQLVRTCLV+NW QEK SI Sbjct: 345 LATLFPQDPLLERDNIQLRVVNYILYGNGKPIRGIYQTSIQLVRTCLVVNWDQEKDGSI- 403 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKR 288 EEVRASFVEI+TN+LIRDFIRIELVQSPI SYI+KR Sbjct: 404 EEVRASFVEIKTNNLIRDFIRIELVQSPI-SYIIKR 438 >YP_009241821.1 RNA polymerase beta' subunit (plastid) [Potamogeton perfoliatus] AMQ13395.1 RNA polymerase beta' subunit (plastid) [Potamogeton perfoliatus] Length = 1377 Score = 154 bits (389), Expect = 2e-41 Identities = 80/96 (83%), Positives = 87/96 (90%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 LAT FPQD L ERDN+QL+VVNYILYGNGKPIRGI+ TSIQLVRTCLV+NW QEK SI Sbjct: 789 LATLFPQDPLLERDNIQLRVVNYILYGNGKPIRGIYQTSIQLVRTCLVVNWDQEKDGSI- 847 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKR 288 EEVRASFVEI+TN+LIRDFIRIELVQSPI SYI+KR Sbjct: 848 EEVRASFVEIKTNNLIRDFIRIELVQSPI-SYIIKR 882 >AFJ73387.1 RNA polymerase beta subunit, partial (chloroplast) [Cypripedium fasciculatum] Length = 882 Score = 153 bits (387), Expect = 3e-41 Identities = 78/96 (81%), Positives = 84/96 (87%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 LAT FPQD L E+DNVQL++VNYILYGNGK IRGI+HTSIQLVR CLVLNW QEKK SIE Sbjct: 444 LATLFPQDLLQEKDNVQLRIVNYILYGNGKSIRGIYHTSIQLVRACLVLNWDQEKKGSIE 503 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKR 288 EEV ASFVEIR NDL+RDFIRIELV+S I SY VKR Sbjct: 504 EEVHASFVEIRANDLLRDFIRIELVKSTI-SYTVKR 538 >AFJ80061.1 RNA polymerase beta subunit, partial (chloroplast) [Cypripedium subtropicum] Length = 882 Score = 151 bits (382), Expect = 1e-40 Identities = 78/96 (81%), Positives = 83/96 (86%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 LAT FPQD L E+DNVQL++VNYILYGNGK IRGI HTSIQLVR CLVLNW QEKK SIE Sbjct: 444 LATLFPQDLLQEKDNVQLRIVNYILYGNGKSIRGISHTSIQLVRACLVLNWDQEKKGSIE 503 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKR 288 EEV ASFVEIR NDL+RDFIRIELV+S I SY VKR Sbjct: 504 EEVHASFVEIRANDLLRDFIRIELVKSTI-SYTVKR 538 >AFJ80059.1 RNA polymerase beta subunit, partial (chloroplast) [Cypripedium acaule] Length = 882 Score = 151 bits (382), Expect = 1e-40 Identities = 78/96 (81%), Positives = 83/96 (86%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 LAT FPQD L E+DNVQL++VNYILYGNGK IRGI HTSIQLVR CLVLNW QEKK SIE Sbjct: 444 LATLFPQDLLQEKDNVQLRIVNYILYGNGKSIRGISHTSIQLVRACLVLNWDQEKKGSIE 503 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKR 288 EEV ASFVEIR NDL+RDFIRIELV+S I SY VKR Sbjct: 504 EEVHASFVEIRANDLLRDFIRIELVKSTI-SYTVKR 538 >AFJ73386.1 RNA polymerase beta subunit, partial (chloroplast) [Cypripedium bardolphianum] Length = 882 Score = 151 bits (382), Expect = 1e-40 Identities = 78/96 (81%), Positives = 83/96 (86%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 LAT FPQD L E+DNVQL++VNYILYGNGK IRGI HTSIQLVR CLVLNW QEKK SIE Sbjct: 444 LATLFPQDLLQEKDNVQLRIVNYILYGNGKSIRGISHTSIQLVRACLVLNWDQEKKGSIE 503 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKR 288 EEV ASFVEIR NDL+RDFIRIELV+S I SY VKR Sbjct: 504 EEVHASFVEIRANDLLRDFIRIELVKSTI-SYTVKR 538 >ABD93829.1 RNA polymerase beta chain, partial (chloroplast) [Pleea tenuifolia] Length = 821 Score = 151 bits (381), Expect = 2e-40 Identities = 80/96 (83%), Positives = 84/96 (87%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 LATFFPQD L ERDNVQLKVVNYILYGNGKPIRGI HTSIQLVRTCLVLNW QE+ S+ Sbjct: 303 LATFFPQDLLQERDNVQLKVVNYILYGNGKPIRGISHTSIQLVRTCLVLNWDQEQNGSM- 361 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKR 288 EEV ASFVE+R NDLIRDFIRIELV+SPI SY KR Sbjct: 362 EEVHASFVEVRANDLIRDFIRIELVKSPI-SYTGKR 396 >AFJ73383.1 RNA polymerase beta subunit, partial (chloroplast) [Selenipedium aequinoctiale] Length = 880 Score = 151 bits (381), Expect = 2e-40 Identities = 78/96 (81%), Positives = 83/96 (86%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 LAT FPQD L E+DNVQL++VNYILYGNGK IRGI HTSIQLVR CLVLNW QEKK SIE Sbjct: 442 LATLFPQDLLQEKDNVQLQIVNYILYGNGKSIRGISHTSIQLVRACLVLNWDQEKKGSIE 501 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKR 288 EEV ASFVEIR NDL+RDFIRIELV+S I SY VKR Sbjct: 502 EEVHASFVEIRANDLLRDFIRIELVKSTI-SYTVKR 536 >YP_009269637.1 RNA polymerase beta' subunit (chloroplast) [Epipactis mairei] ANT72548.1 RNA polymerase beta' subunit (chloroplast) [Epipactis mairei] Length = 1381 Score = 151 bits (381), Expect = 2e-40 Identities = 78/96 (81%), Positives = 84/96 (87%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 LAT F QD L E+DNVQL++VNYILYGNGK IRGI HT+IQLVR CLVLNW QEKK SIE Sbjct: 793 LATLFSQDLLQEKDNVQLRIVNYILYGNGKSIRGISHTNIQLVRACLVLNWDQEKKGSIE 852 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKR 288 EEV ASFVEIRTNDL+RDFIRIELV+S I SYIVKR Sbjct: 853 EEVHASFVEIRTNDLLRDFIRIELVKSTI-SYIVKR 887 >YP_006665770.1 RNA polymerase beta' subunit (chloroplast) [Elodea canadensis] AEY84642.1 RNA polymerase beta' subunit (chloroplast) [Elodea canadensis] Length = 1387 Score = 151 bits (381), Expect = 2e-40 Identities = 78/97 (80%), Positives = 86/97 (88%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 L TFFP+D L ER+NVQL+VVNYI YGNGKPIRGI+HTSIQLVRTCLVLNW QE+ SI Sbjct: 790 LPTFFPRDPLRERENVQLRVVNYIPYGNGKPIRGIYHTSIQLVRTCLVLNWDQERNGSI- 848 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKRK 291 EE+ ASFVEIRTNDLIRDFI++ELVQSPI SY VKRK Sbjct: 849 EEIHASFVEIRTNDLIRDFIKMELVQSPI-SYTVKRK 884 >ABD93748.1 RNA polymerase beta chain, partial (chloroplast) [Magnolia tripetala] Length = 859 Score = 150 bits (380), Expect = 2e-40 Identities = 78/96 (81%), Positives = 85/96 (88%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 L TFFPQD L ERDNVQL+VVNYILYGNGKPIRGI+HTSIQLVRTCLVLNW Q++ SI Sbjct: 344 LGTFFPQDLLQERDNVQLRVVNYILYGNGKPIRGIYHTSIQLVRTCLVLNWDQDRNGSI- 402 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKR 288 EEV ASFVE+ TNDLIRDFIRI+LV+SPI SYI KR Sbjct: 403 EEVHASFVEVGTNDLIRDFIRIDLVKSPI-SYIGKR 437 >YP_009026871.1 RNA polymerase beta'' subunit (plastid) [Magnolia tripetala] AHW51948.1 RNA polymerase beta'' subunit (plastid) [Magnolia tripetala] Length = 1382 Score = 150 bits (380), Expect = 2e-40 Identities = 78/96 (81%), Positives = 85/96 (88%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 L TFFPQD L ERDNVQL+VVNYILYGNGKPIRGI+HTSIQLVRTCLVLNW Q++ SI Sbjct: 792 LGTFFPQDLLQERDNVQLRVVNYILYGNGKPIRGIYHTSIQLVRTCLVLNWDQDRNGSI- 850 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKR 288 EEV ASFVE+ TNDLIRDFIRI+LV+SPI SYI KR Sbjct: 851 EEVHASFVEVGTNDLIRDFIRIDLVKSPI-SYIGKR 885 >YP_007474442.1 RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis subsp. biloba] AEX98574.1 RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis subsp. biloba] AEX98658.1 RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis subsp. biloba] AEX98742.1 RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis subsp. biloba] Length = 1382 Score = 150 bits (380), Expect = 2e-40 Identities = 78/96 (81%), Positives = 85/96 (88%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 L TFFPQD L ERDNVQL+VVNYILYGNGKPIRGI+HTSIQLVRTCLVLNW Q++ SI Sbjct: 792 LGTFFPQDLLQERDNVQLRVVNYILYGNGKPIRGIYHTSIQLVRTCLVLNWDQDRNGSI- 850 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKR 288 EEV ASFVE+ TNDLIRDFIRI+LV+SPI SYI KR Sbjct: 851 EEVHASFVEVGTNDLIRDFIRIDLVKSPI-SYIGKR 885 >YP_007474360.1 RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis] AEX98492.1 RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis] Length = 1382 Score = 150 bits (380), Expect = 2e-40 Identities = 78/96 (81%), Positives = 85/96 (88%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 L TFFPQD L ERDNVQL+VVNYILYGNGKPIRGI+HTSIQLVRTCLVLNW Q++ SI Sbjct: 792 LGTFFPQDLLQERDNVQLRVVNYILYGNGKPIRGIYHTSIQLVRTCLVLNWDQDRNGSI- 850 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKR 288 EEV ASFVE+ TNDLIRDFIRI+LV+SPI SYI KR Sbjct: 851 EEVHASFVEVGTNDLIRDFIRIDLVKSPI-SYIGKR 885 >AFJ80063.1 RNA polymerase beta subunit, partial (chloroplast) [Cypripedium molle] Length = 882 Score = 150 bits (379), Expect = 3e-40 Identities = 76/96 (79%), Positives = 83/96 (86%) Frame = +1 Query: 1 LATFFPQDALWERDNVQLKVVNYILYGNGKPIRGIFHTSIQLVRTCLVLNWGQEKKSSIE 180 LAT FPQD L E+DNVQL++VNYILYGNGK IRGI HTSIQLVR CLVLNW QEKK SIE Sbjct: 444 LATLFPQDLLQEKDNVQLRIVNYILYGNGKSIRGISHTSIQLVRACLVLNWDQEKKGSIE 503 Query: 181 EEVRASFVEIRTNDLIRDFIRIELVQSPISSYIVKR 288 EE+ ASFVEIR ND++RDFIRIELV+S I SY VKR Sbjct: 504 EEIHASFVEIRANDMLRDFIRIELVKSTI-SYTVKR 538