BLASTX nr result
ID: Alisma22_contig00043346
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00043346
(238 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EEC68428.1 hypothetical protein OsI_36616 [Oryza sativa Indica G... 106 2e-28
AAU10682.1 putative polyprotein [Oryza sativa Japonica Group] 113 2e-27
AAX96193.1 retrotransposon protein, putative, Ty1-copia sub-clas... 113 2e-27
ABA98286.2 retrotransposon protein, putative, Ty1-copia subclass... 112 3e-27
AAW56918.1 putative polyprotein [Oryza sativa Japonica Group] 111 9e-27
ABA98049.1 retrotransposon protein, putative, Ty1-copia subclass... 111 9e-27
ABA97278.2 retrotransposon protein, putative, Ty1-copia subclass... 109 3e-26
CAE76053.1 B1248C03.12 [Oryza sativa Japonica Group] 109 3e-26
CAH66819.1 OSIGBa0093K19.6 [Oryza sativa Indica Group] 108 4e-26
CAE04381.1 OSJNBa0027G07.23 [Oryza sativa Japonica Group] CAE025... 108 4e-26
EEC76475.1 hypothetical protein OsI_14210 [Oryza sativa Indica G... 106 1e-25
AAX95666.1 Reverse transcriptase (RNA-dependent DNA polymerase),... 107 3e-25
ABA94335.1 retrotransposon protein, putative, Ty1-copia subclass... 105 3e-25
XP_015689736.1 PREDICTED: uncharacterized mitochondrial protein ... 104 5e-25
XP_020148781.1 uncharacterized protein LOC109733980 [Aegilops ta... 106 5e-25
AAL86510.1 putative retrotransposon protein [Oryza sativa Japoni... 106 5e-25
ABB47033.2 retrotransposon protein, putative, Ty1-copia subclass... 106 5e-25
AAM18766.1 putative copia-like retrotransposon Hopscotch polypro... 106 5e-25
ABF95616.1 retrotransposon protein, putative, Ty1-copia subclass... 106 5e-25
AAR88589.1 putative copia-like retrotransposon protein [Oryza sa... 106 5e-25
>EEC68428.1 hypothetical protein OsI_36616 [Oryza sativa Indica Group]
Length = 90
Score = 106 bits (264), Expect = 2e-28
Identities = 51/72 (70%), Positives = 59/72 (81%)
Frame = +3
Query: 18 PHKICKLKKAIYGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYMLIYVD 197
P+ +CKL KA+YGLKQAPRAWYSRLS KL + GF PSKADTSLF + G +SI++LIYVD
Sbjct: 2 PNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVD 61
Query: 198 DIIVASSSNSAT 233
DIIVASS AT
Sbjct: 62 DIIVASSVPDAT 73
>AAU10682.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 113 bits (282), Expect = 2e-27
Identities = 55/76 (72%), Positives = 62/76 (81%)
Frame = +3
Query: 6 DPKYPHKICKLKKAIYGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYML 185
D P+ ICKL KA+YGLKQAPRAWYSRLS KL D GF+PSKADTSLF + GNI I++L
Sbjct: 949 DRNKPNYICKLDKALYGLKQAPRAWYSRLSMKLCDLGFQPSKADTSLFFYNKGNIVIFVL 1008
Query: 186 IYVDDIIVASSSNSAT 233
IYVDDIIVASS+ AT
Sbjct: 1009 IYVDDIIVASSTEDAT 1024
>AAX96193.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 1621
Score = 113 bits (282), Expect = 2e-27
Identities = 52/76 (68%), Positives = 63/76 (82%)
Frame = +3
Query: 6 DPKYPHKICKLKKAIYGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYML 185
DP PH +CKL KA+YGLKQAPRAW+SRLS KL+D GF+ SKADTSLF G+I++++L
Sbjct: 799 DPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLFFLNKGDITMFVL 858
Query: 186 IYVDDIIVASSSNSAT 233
+YVDDIIVASSS AT
Sbjct: 859 VYVDDIIVASSSEKAT 874
>ABA98286.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 112 bits (281), Expect = 3e-27
Identities = 52/76 (68%), Positives = 63/76 (82%)
Frame = +3
Query: 6 DPKYPHKICKLKKAIYGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYML 185
DP PH +CKL KA+YGLKQAPRAW+SRLS KL+D GF+ SKADTSLF G+I++++L
Sbjct: 1070 DPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLFFLNKGDITMFVL 1129
Query: 186 IYVDDIIVASSSNSAT 233
+YVDDIIVASSS AT
Sbjct: 1130 VYVDDIIVASSSERAT 1145
>AAW56918.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1018
Score = 111 bits (277), Expect = 9e-27
Identities = 52/74 (70%), Positives = 64/74 (86%)
Frame = +3
Query: 12 KYPHKICKLKKAIYGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYMLIY 191
K+P+ ICKL KAIYGLKQAPRAWYSRLS KL GF+PSK DTSLF ++ G++++++LIY
Sbjct: 692 KFPNHICKLDKAIYGLKQAPRAWYSRLSTKLQALGFKPSKVDTSLFFYSKGDVTVFVLIY 751
Query: 192 VDDIIVASSSNSAT 233
VDDIIVASS+ SAT
Sbjct: 752 VDDIIVASSTPSAT 765
>ABA98049.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 111 bits (277), Expect = 9e-27
Identities = 51/76 (67%), Positives = 62/76 (81%)
Frame = +3
Query: 6 DPKYPHKICKLKKAIYGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYML 185
DP PH +CKL KA+YGLKQAPRAW+SRLS KL+D GF+ SK DTSLF G+I++++L
Sbjct: 1077 DPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKPDTSLFFLNKGDITMFVL 1136
Query: 186 IYVDDIIVASSSNSAT 233
+YVDDIIVASSS AT
Sbjct: 1137 VYVDDIIVASSSEKAT 1152
>ABA97278.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 642
Score = 109 bits (273), Expect = 3e-26
Identities = 52/76 (68%), Positives = 61/76 (80%)
Frame = +3
Query: 6 DPKYPHKICKLKKAIYGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYML 185
DP PH +CKL KA+YGLKQAPRAW+S+LS KLID GF SKADTSLF G I++++L
Sbjct: 382 DPTKPHFVCKLDKALYGLKQAPRAWFSKLSKKLIDLGFIGSKADTSLFFLNKGGITMFVL 441
Query: 186 IYVDDIIVASSSNSAT 233
+YVDDIIVASSS AT
Sbjct: 442 VYVDDIIVASSSERAT 457
>CAE76053.1 B1248C03.12 [Oryza sativa Japonica Group]
Length = 567
Score = 109 bits (272), Expect = 3e-26
Identities = 52/76 (68%), Positives = 59/76 (77%)
Frame = +3
Query: 6 DPKYPHKICKLKKAIYGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYML 185
D YPH ICKL KA+YGLKQAPRAWYSRLSHKL + GF PSKADT LF G +I++L
Sbjct: 402 DKAYPHYICKLDKALYGLKQAPRAWYSRLSHKLQELGFVPSKADTFLFYLNKGKYTIFVL 461
Query: 186 IYVDDIIVASSSNSAT 233
+YVD II+ASSS AT
Sbjct: 462 VYVDVIIIASSSQEAT 477
>CAH66819.1 OSIGBa0093K19.6 [Oryza sativa Indica Group]
Length = 472
Score = 108 bits (270), Expect = 4e-26
Identities = 50/74 (67%), Positives = 64/74 (86%)
Frame = +3
Query: 12 KYPHKICKLKKAIYGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYMLIY 191
K+P+ ICKL KA+YGLKQAPRAWYS+LS KL GF+PS ADTSLF ++ G++++++LIY
Sbjct: 260 KFPNHICKLDKALYGLKQAPRAWYSKLSTKLQALGFKPSMADTSLFFYSKGDVNVFVLIY 319
Query: 192 VDDIIVASSSNSAT 233
VDDIIVASS+ SAT
Sbjct: 320 VDDIIVASSTPSAT 333
>CAE04381.1 OSJNBa0027G07.23 [Oryza sativa Japonica Group] CAE02562.2
OSJNBa0006M15.5 [Oryza sativa Japonica Group]
Length = 472
Score = 108 bits (270), Expect = 4e-26
Identities = 50/74 (67%), Positives = 64/74 (86%)
Frame = +3
Query: 12 KYPHKICKLKKAIYGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYMLIY 191
K+P+ ICKL KA+YGLKQAPRAWYS+LS KL GF+PS ADTSLF ++ G++++++LIY
Sbjct: 260 KFPNHICKLDKALYGLKQAPRAWYSKLSTKLQALGFKPSMADTSLFFYSKGDVNVFVLIY 319
Query: 192 VDDIIVASSSNSAT 233
VDDIIVASS+ SAT
Sbjct: 320 VDDIIVASSTPSAT 333
>EEC76475.1 hypothetical protein OsI_14210 [Oryza sativa Indica Group]
Length = 391
Score = 106 bits (264), Expect = 1e-25
Identities = 51/72 (70%), Positives = 59/72 (81%)
Frame = +3
Query: 18 PHKICKLKKAIYGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYMLIYVD 197
P+ +CKL KA+YGLKQAPRAWYSRLS KL + GF PSKADTSLF + G +SI++LIYVD
Sbjct: 13 PNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVD 72
Query: 198 DIIVASSSNSAT 233
DIIVASS AT
Sbjct: 73 DIIVASSVPDAT 84
>AAX95666.1 Reverse transcriptase (RNA-dependent DNA polymerase), putative
[Oryza sativa Japonica Group] ABF98495.1 retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 757
Score = 107 bits (266), Expect = 3e-25
Identities = 51/76 (67%), Positives = 61/76 (80%)
Frame = +3
Query: 6 DPKYPHKICKLKKAIYGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYML 185
D PH ICKL K++YGLKQAPRAW++RLS+KLID GF SKADTSLF G+I+I++L
Sbjct: 469 DVTKPHYICKLDKSLYGLKQAPRAWFARLSNKLIDLGFSASKADTSLFFLHKGDIAIFIL 528
Query: 186 IYVDDIIVASSSNSAT 233
+YVDDIIV SSS AT
Sbjct: 529 VYVDDIIVVSSSERAT 544
>ABA94335.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 404
Score = 105 bits (262), Expect = 3e-25
Identities = 50/77 (64%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Frame = +3
Query: 6 DPKYPHKICKLKKAI-YGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYM 182
D + P+ +CKL KA+ YGLKQAPRAWYSRLS KL D GF+ SKADTSLF ++ G +++++
Sbjct: 241 DKRKPNHVCKLDKALLYGLKQAPRAWYSRLSSKLCDIGFKLSKADTSLFFYSKGGVTVFV 300
Query: 183 LIYVDDIIVASSSNSAT 233
LIYVDDIIVASS+ +AT
Sbjct: 301 LIYVDDIIVASSTQNAT 317
>XP_015689736.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Oryza brachyantha]
Length = 385
Score = 104 bits (260), Expect = 5e-25
Identities = 51/76 (67%), Positives = 60/76 (78%)
Frame = +3
Query: 6 DPKYPHKICKLKKAIYGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYML 185
D PH ICKL K++YGLKQAP AW++RLS KLID GF SKADTSLF G+I+I++L
Sbjct: 9 DVTKPHYICKLDKSLYGLKQAPGAWFARLSKKLIDLGFSASKADTSLFYIHKGDIAIFIL 68
Query: 186 IYVDDIIVASSSNSAT 233
+YVDDIIVASSS AT
Sbjct: 69 VYVDDIIVASSSERAT 84
>XP_020148781.1 uncharacterized protein LOC109733980 [Aegilops tauschii subsp.
tauschii]
Length = 730
Score = 106 bits (264), Expect = 5e-25
Identities = 52/75 (69%), Positives = 58/75 (77%)
Frame = +3
Query: 6 DPKYPHKICKLKKAIYGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYML 185
DP P ICKL K++YGLKQAPRAWYSRLS KL GF PSK+DTSLFI+ N I++L
Sbjct: 577 DPDKPFHICKLDKSLYGLKQAPRAWYSRLSSKLHTLGFVPSKSDTSLFIYNKSNTVIFVL 636
Query: 186 IYVDDIIVASSSNSA 230
IYVDDIIV SSSN A
Sbjct: 637 IYVDDIIVTSSSNEA 651
>AAL86510.1 putative retrotransposon protein [Oryza sativa Japonica Group]
Length = 1139
Score = 106 bits (264), Expect = 5e-25
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = +3
Query: 18 PHKICKLKKAIYGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYMLIYVD 197
PH +CKL KA+YGLKQAPRAWYSRLS KL GF PSKADTSLF + G+++I++L+YVD
Sbjct: 659 PHYVCKLDKALYGLKQAPRAWYSRLSMKLQQLGFSPSKADTSLFFYRKGSVTIFVLVYVD 718
Query: 198 DIIVASSSNSA 230
DI VASSS A
Sbjct: 719 DITVASSSQDA 729
>ABB47033.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 106 bits (264), Expect = 5e-25
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = +3
Query: 18 PHKICKLKKAIYGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYMLIYVD 197
PH +CKL KA+YGLKQAPRAWYSRLS KL GF PSKADTSLF + G+++I++L+YVD
Sbjct: 653 PHYVCKLDKALYGLKQAPRAWYSRLSMKLQQLGFSPSKADTSLFFYRKGSVTIFVLVYVD 712
Query: 198 DIIVASSSNSA 230
DI VASSS A
Sbjct: 713 DITVASSSQDA 723
>AAM18766.1 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
sativa Japonica Group]
Length = 1150
Score = 106 bits (264), Expect = 5e-25
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = +3
Query: 18 PHKICKLKKAIYGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYMLIYVD 197
PH +CKL KA+YGLKQAPRAWYSRLS KL GF PSKADTSLF + G+++I++L+YVD
Sbjct: 691 PHYVCKLDKALYGLKQAPRAWYSRLSMKLQQLGFSPSKADTSLFFYRKGSVTIFVLVYVD 750
Query: 198 DIIVASSSNSA 230
DI VASSS A
Sbjct: 751 DITVASSSQDA 761
>ABF95616.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1241
Score = 106 bits (264), Expect = 5e-25
Identities = 51/72 (70%), Positives = 59/72 (81%)
Frame = +3
Query: 18 PHKICKLKKAIYGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYMLIYVD 197
P+ +CKL KA+YGLKQAPRAWYSRLS KL + GF PSKADTSLF + G +SI++LIYVD
Sbjct: 967 PNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVD 1026
Query: 198 DIIVASSSNSAT 233
DIIVASS AT
Sbjct: 1027 DIIVASSVPDAT 1038
>AAR88589.1 putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 106 bits (264), Expect = 5e-25
Identities = 51/72 (70%), Positives = 59/72 (81%)
Frame = +3
Query: 18 PHKICKLKKAIYGLKQAPRAWYSRLSHKLIDFGFRPSKADTSLFIFTSGNISIYMLIYVD 197
P+ +CKL KA+YGLKQAPRAWYSRLS KL + GF PSKADTSLF + G +SI++LIYVD
Sbjct: 1021 PNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVD 1080
Query: 198 DIIVASSSNSAT 233
DIIVASS AT
Sbjct: 1081 DIIVASSVPDAT 1092