BLASTX nr result
ID: Alisma22_contig00043231
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00043231
(533 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KMZ71043.1 hypothetical protein ZOSMA_189G00040 [Zostera marina] 100 9e-22
XP_017649887.1 PREDICTED: pentatricopeptide repeat-containing pr... 99 7e-21
XP_016685407.1 PREDICTED: pentatricopeptide repeat-containing pr... 99 7e-21
XP_017649884.1 PREDICTED: pentatricopeptide repeat-containing pr... 99 7e-21
XP_016685402.1 PREDICTED: pentatricopeptide repeat-containing pr... 99 7e-21
XP_012454261.1 PREDICTED: pentatricopeptide repeat-containing pr... 99 9e-21
XP_016699181.1 PREDICTED: pentatricopeptide repeat-containing pr... 99 1e-20
XP_012454260.1 PREDICTED: pentatricopeptide repeat-containing pr... 99 1e-20
5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 96 8e-20
5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide ... 95 1e-19
5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 95 1e-19
5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 95 1e-19
XP_002989829.1 hypothetical protein SELMODRAFT_42426, partial [S... 91 9e-19
XP_002991993.1 hypothetical protein SELMODRAFT_42424, partial [S... 91 9e-19
EPS61251.1 hypothetical protein M569_13548, partial [Genlisea au... 92 1e-18
XP_006836883.1 PREDICTED: pentatricopeptide repeat-containing pr... 91 6e-18
NP_176496.1 Pentatricopeptide repeat (PPR) superfamily protein [... 90 8e-18
NP_176495.1 pentatricopeptide (PPR) repeat-containing protein [A... 90 1e-17
XP_010671063.1 PREDICTED: pentatricopeptide repeat-containing pr... 90 1e-17
XP_009409780.1 PREDICTED: pentatricopeptide repeat-containing pr... 90 1e-17
>KMZ71043.1 hypothetical protein ZOSMA_189G00040 [Zostera marina]
Length = 474
Score = 100 bits (250), Expect = 9e-22
Identities = 69/181 (38%), Positives = 92/181 (50%), Gaps = 4/181 (2%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPD----VVICNRVLRS 365
E M +G L +S T AL+ + K K G+ L + + F D CN VL
Sbjct: 92 ERMPKLGSLPNSHTWVALIRGLCCK-KDGSHFALQLLHDGIQFSRDRCDVSAACNVVLED 150
Query: 364 LSRCALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLL 185
L K E AL LF+ MI V+PD TY+FL+KCCC AG+VD GL L
Sbjct: 151 LG----KRGSWEP-------ALNLFQVMIEWGVVPDYTTYYFLVKCCCRAGQVDVGLELF 199
Query: 184 ADMLKRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQT 5
M++ RGMM ALI+ LI NR+AEA +DRM + P V++ N +++ C T
Sbjct: 200 NHMVETNYAPNRGMMTALIHALIANNRLAEARHHYDRMIELKLFPTVFTSNTLIRGFCHT 259
Query: 4 G 2
G
Sbjct: 260 G 260
>XP_017649887.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like isoform X2 [Gossypium arboreum]
Length = 726
Score = 99.0 bits (245), Expect = 7e-21
Identities = 59/175 (33%), Positives = 92/175 (52%)
Frame = -2
Query: 526 MLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCAL 347
ML +G+ + T S L++ + ++ + A+ L M + G+RPD CN VL L C
Sbjct: 94 MLKLGFEPNVVTLSTLINGLCNQSRVSQAVKLFYEMIEKGYRPDSFACNTVLNGL--CKS 151
Query: 346 KHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKR 167
++ R R A+ L +M V D ++ LI C C GKVD G S+L MLK
Sbjct: 152 GNTGRAVRMKHYALAVSLGSQMKLWGVSHDAHSFNILINCFCQLGKVDFGFSVLGKMLKL 211
Query: 166 GCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
G + ++ LI L +N++++A LFD M GC+P+ ++N +L LC+TG
Sbjct: 212 GFEPDVVTLSTLINGLCNQNKVSQAASLFDEMIKKGCRPDSVAYNTVLNGLCKTG 266
Score = 67.8 bits (164), Expect = 5e-10
Identities = 43/167 (25%), Positives = 73/167 (43%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D+ + + L++ GK +L M KLGF PDVV + ++ L
Sbjct: 181 DAHSFNILINCFCQLGKVDFGFSVLGKMLKLGFEPDVVTLSTLINGLCN----------- 229
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
++A LF+EMI PD+ Y ++ C G + + L M +RG +
Sbjct: 230 QNKVSQAASLFDEMIKKGCRPDSVAYNTVLNGLCKTGNTGRAVKFLRMMNERGFEPNIRA 289
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
+ LI L + + EA LF + G +PN+ +N ++ +C +G
Sbjct: 290 YSTLIDCLCKNGLLNEAVDLFSEVNVKGIRPNIVIYNCLIHGMCNSG 336
Score = 67.0 bits (162), Expect = 9e-10
Identities = 43/165 (26%), Positives = 75/165 (45%)
Frame = -2
Query: 496 RTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESRSI 317
R S L+ + G A+ L + + G RP++VI N ++ + +H
Sbjct: 288 RAYSTLIDCLCKNGLLNEAVDLFSEVNVKGIRPNIVIYNCLIHGMCNSGQQHE------- 340
Query: 316 IANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMN 137
A +L EM+ V PD FTY LI C G + + +S+ M K+G + N
Sbjct: 341 ----ATKLLNEMVGNNVSPDIFTYNILIDAHCKEGTILEAVSIFNAMRKQGIKPDVVTYN 396
Query: 136 ALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
L+ +E I+E+ + M G +P+V +++ ++ A C+ G
Sbjct: 397 ILVDAWCKERLISESLDVVHTMRKQGIEPDVVTYSTLVDAHCKEG 441
Score = 63.5 bits (153), Expect = 1e-08
Identities = 43/167 (25%), Positives = 74/167 (44%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D T + L+ A +G A+ + N M K G +PDVV N ++ D +
Sbjct: 356 DIFTYNILIDAHCKEGTILEAVSIFNAMRKQGIKPDVVTYNILV-----------DAWCK 404
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
+ + +L++ M + PD TY L+ C G+V + ++ M K G +
Sbjct: 405 ERLISESLDVVHTMRKQGIEPDVVTYSTLVDAHCKEGRVSEAEDIVDTMRKEGIEPDVVT 464
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
N L+ +E I++A M G +P+V ++N + ALC+ G
Sbjct: 465 YNILVDAYCKERSISKAVDTIATMRKQGVEPDVVTYNIFIDALCKNG 511
Score = 62.8 bits (151), Expect = 2e-08
Identities = 30/86 (34%), Positives = 50/86 (58%)
Frame = -2
Query: 259 DTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNALIYELIRENRIAEACILF 80
+ +++ LI C C GKVD G S+L MLK G + ++ LI L ++R+++A LF
Sbjct: 67 NAYSFTILINCFCHLGKVDFGFSVLGKMLKLGFEPNVVTLSTLINGLCNQSRVSQAVKLF 126
Query: 79 DRMAAMGCKPNVYSFNAILKALCQTG 2
M G +P+ ++ N +L LC++G
Sbjct: 127 YEMIEKGYRPDSFACNTVLNGLCKSG 152
Score = 61.2 bits (147), Expect = 8e-08
Identities = 42/167 (25%), Positives = 72/167 (43%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D T + + A+ G A +++ M K P+ V ++ L C L
Sbjct: 496 DVVTYNIFIDALCKNGMVSEAECIVDTMRKQCIEPNFVTYRTLM--LGMCELGR------ 547
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
+ A EL +M++ +PD T L+ C GK+D+ L M G +
Sbjct: 548 ---VSTACELLRKMLTSGEVPDLMTISILLDDFCKRGKLDEALEFFQAMRNSGLKLDTDS 604
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
+ +I L + +I A LF ++ G KPNVY+++ ++ LC+ G
Sbjct: 605 YSVVIDGLCKAGQIEVAKELFHELSVNGLKPNVYTYDIVINGLCKEG 651
>XP_016685407.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like isoform X2 [Gossypium hirsutum]
Length = 726
Score = 99.0 bits (245), Expect = 7e-21
Identities = 59/175 (33%), Positives = 92/175 (52%)
Frame = -2
Query: 526 MLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCAL 347
ML +G+ + T S L++ + ++ + A+ L M + G+RPD CN VL L C
Sbjct: 94 MLKLGFEPNVVTLSTLINGLCNQSRVSQAVNLFYEMIEKGYRPDSFACNTVLNGL--CKS 151
Query: 346 KHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKR 167
++ R R A+ L +M V D ++ LI C C GKVD G S+L MLK
Sbjct: 152 GNTGRAVRMKHYALAVSLGSQMELWGVSHDAHSFNILINCFCQLGKVDFGFSVLGKMLKL 211
Query: 166 GCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
G + ++ LI L +N++++A LFD M GC+P+ ++N +L LC+TG
Sbjct: 212 GFEPDVVTLSTLINGLCNQNKVSQAASLFDEMIKKGCRPDSVAYNTVLNGLCKTG 266
Score = 67.8 bits (164), Expect = 5e-10
Identities = 43/167 (25%), Positives = 73/167 (43%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D+ + + L++ GK +L M KLGF PDVV + ++ L
Sbjct: 181 DAHSFNILINCFCQLGKVDFGFSVLGKMLKLGFEPDVVTLSTLINGLCN----------- 229
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
++A LF+EMI PD+ Y ++ C G + + L M +RG +
Sbjct: 230 QNKVSQAASLFDEMIKKGCRPDSVAYNTVLNGLCKTGNTGRAVKFLRMMNERGFEPNIRA 289
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
+ LI L + + EA LF + G +PN+ +N ++ +C +G
Sbjct: 290 YSTLIDCLCKNGLLNEAVDLFSEVNVKGIRPNIVIYNCLIHGMCNSG 336
Score = 67.0 bits (162), Expect = 9e-10
Identities = 43/165 (26%), Positives = 75/165 (45%)
Frame = -2
Query: 496 RTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESRSI 317
R S L+ + G A+ L + + G RP++VI N ++ + +H
Sbjct: 288 RAYSTLIDCLCKNGLLNEAVDLFSEVNVKGIRPNIVIYNCLIHGMCNSGQQHE------- 340
Query: 316 IANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMN 137
A +L EM+ V PD FTY LI C G + + +S+ M K+G + N
Sbjct: 341 ----ATKLLNEMVGNNVSPDIFTYNILIDAHCKEGTILEAVSIFNAMRKQGIKPDVVTYN 396
Query: 136 ALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
L+ +E I+E+ + M G +P+V +++ ++ A C+ G
Sbjct: 397 ILVDAWCKERLISESLDVVHTMRKQGIEPDVVTYSTLVDAHCKEG 441
Score = 63.5 bits (153), Expect = 1e-08
Identities = 43/167 (25%), Positives = 74/167 (44%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D T + L+ A +G A+ + N M K G +PDVV N ++ D +
Sbjct: 356 DIFTYNILIDAHCKEGTILEAVSIFNAMRKQGIKPDVVTYNILV-----------DAWCK 404
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
+ + +L++ M + PD TY L+ C G+V + ++ M K G +
Sbjct: 405 ERLISESLDVVHTMRKQGIEPDVVTYSTLVDAHCKEGRVSEAEDIVDTMRKEGIEPDVVT 464
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
N L+ +E I++A M G +P+V ++N + ALC+ G
Sbjct: 465 YNILVDVYCKERSISKAVDTIATMRKQGVEPDVVTYNIFINALCKNG 511
Score = 63.2 bits (152), Expect = 2e-08
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Frame = -2
Query: 442 ALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESRSIIANRALELF--EEMISIL 269
AL L N M +P +V + +L+++ R +KH AL +F +M
Sbjct: 17 ALSLFNKMIDECRKPSIVEFSILLQAIVR--MKHY-----------ALVVFLGSQMELRG 63
Query: 268 VIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNALIYELIRENRIAEAC 89
V + +++ LI C C GKVD G S+L MLK G + ++ LI L ++R+++A
Sbjct: 64 VSHNAYSFTILINCFCHLGKVDFGFSVLGKMLKLGFEPNVVTLSTLINGLCNQSRVSQAV 123
Query: 88 ILFDRMAAMGCKPNVYSFNAILKALCQTG 2
LF M G +P+ ++ N +L LC++G
Sbjct: 124 NLFYEMIEKGYRPDSFACNTVLNGLCKSG 152
Score = 58.9 bits (141), Expect = 5e-07
Identities = 42/167 (25%), Positives = 72/167 (43%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D T + ++A+ G A +++ M K P+ V ++ L C L
Sbjct: 496 DVVTYNIFINALCKNGMVSEAECIVDTMRKQCIEPNFVTYRTLM--LGMCELGR------ 547
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
+ A EL +M++ +PD T L+ GK+D+ L M G +
Sbjct: 548 ---VSTACELLRKMLTSGEVPDLMTISILLHDFRKTGKLDEALEFFQAMRNSGLKLDTDS 604
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
+ +I L + RI A LF ++ G KPNVY+++ ++ LC+ G
Sbjct: 605 YSVVIDGLCKAGRIEVAKELFHELSVNGLKPNVYTYDIVINGLCKEG 651
>XP_017649884.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like isoform X1 [Gossypium arboreum]
XP_017649885.1 PREDICTED: pentatricopeptide
repeat-containing protein At1g63330-like isoform X1
[Gossypium arboreum] XP_017649886.1 PREDICTED:
pentatricopeptide repeat-containing protein
At1g63330-like isoform X1 [Gossypium arboreum]
Length = 771
Score = 99.0 bits (245), Expect = 7e-21
Identities = 59/175 (33%), Positives = 92/175 (52%)
Frame = -2
Query: 526 MLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCAL 347
ML +G+ + T S L++ + ++ + A+ L M + G+RPD CN VL L C
Sbjct: 139 MLKLGFEPNVVTLSTLINGLCNQSRVSQAVKLFYEMIEKGYRPDSFACNTVLNGL--CKS 196
Query: 346 KHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKR 167
++ R R A+ L +M V D ++ LI C C GKVD G S+L MLK
Sbjct: 197 GNTGRAVRMKHYALAVSLGSQMKLWGVSHDAHSFNILINCFCQLGKVDFGFSVLGKMLKL 256
Query: 166 GCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
G + ++ LI L +N++++A LFD M GC+P+ ++N +L LC+TG
Sbjct: 257 GFEPDVVTLSTLINGLCNQNKVSQAASLFDEMIKKGCRPDSVAYNTVLNGLCKTG 311
Score = 67.8 bits (164), Expect = 5e-10
Identities = 43/167 (25%), Positives = 73/167 (43%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D+ + + L++ GK +L M KLGF PDVV + ++ L
Sbjct: 226 DAHSFNILINCFCQLGKVDFGFSVLGKMLKLGFEPDVVTLSTLINGLCN----------- 274
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
++A LF+EMI PD+ Y ++ C G + + L M +RG +
Sbjct: 275 QNKVSQAASLFDEMIKKGCRPDSVAYNTVLNGLCKTGNTGRAVKFLRMMNERGFEPNIRA 334
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
+ LI L + + EA LF + G +PN+ +N ++ +C +G
Sbjct: 335 YSTLIDCLCKNGLLNEAVDLFSEVNVKGIRPNIVIYNCLIHGMCNSG 381
Score = 67.0 bits (162), Expect = 9e-10
Identities = 43/165 (26%), Positives = 75/165 (45%)
Frame = -2
Query: 496 RTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESRSI 317
R S L+ + G A+ L + + G RP++VI N ++ + +H
Sbjct: 333 RAYSTLIDCLCKNGLLNEAVDLFSEVNVKGIRPNIVIYNCLIHGMCNSGQQHE------- 385
Query: 316 IANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMN 137
A +L EM+ V PD FTY LI C G + + +S+ M K+G + N
Sbjct: 386 ----ATKLLNEMVGNNVSPDIFTYNILIDAHCKEGTILEAVSIFNAMRKQGIKPDVVTYN 441
Query: 136 ALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
L+ +E I+E+ + M G +P+V +++ ++ A C+ G
Sbjct: 442 ILVDAWCKERLISESLDVVHTMRKQGIEPDVVTYSTLVDAHCKEG 486
Score = 63.5 bits (153), Expect = 1e-08
Identities = 43/167 (25%), Positives = 74/167 (44%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D T + L+ A +G A+ + N M K G +PDVV N ++ D +
Sbjct: 401 DIFTYNILIDAHCKEGTILEAVSIFNAMRKQGIKPDVVTYNILV-----------DAWCK 449
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
+ + +L++ M + PD TY L+ C G+V + ++ M K G +
Sbjct: 450 ERLISESLDVVHTMRKQGIEPDVVTYSTLVDAHCKEGRVSEAEDIVDTMRKEGIEPDVVT 509
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
N L+ +E I++A M G +P+V ++N + ALC+ G
Sbjct: 510 YNILVDAYCKERSISKAVDTIATMRKQGVEPDVVTYNIFIDALCKNG 556
Score = 62.8 bits (151), Expect = 3e-08
Identities = 30/86 (34%), Positives = 50/86 (58%)
Frame = -2
Query: 259 DTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNALIYELIRENRIAEACILF 80
+ +++ LI C C GKVD G S+L MLK G + ++ LI L ++R+++A LF
Sbjct: 112 NAYSFTILINCFCHLGKVDFGFSVLGKMLKLGFEPNVVTLSTLINGLCNQSRVSQAVKLF 171
Query: 79 DRMAAMGCKPNVYSFNAILKALCQTG 2
M G +P+ ++ N +L LC++G
Sbjct: 172 YEMIEKGYRPDSFACNTVLNGLCKSG 197
Score = 61.2 bits (147), Expect = 8e-08
Identities = 42/167 (25%), Positives = 72/167 (43%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D T + + A+ G A +++ M K P+ V ++ L C L
Sbjct: 541 DVVTYNIFIDALCKNGMVSEAECIVDTMRKQCIEPNFVTYRTLM--LGMCELGR------ 592
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
+ A EL +M++ +PD T L+ C GK+D+ L M G +
Sbjct: 593 ---VSTACELLRKMLTSGEVPDLMTISILLDDFCKRGKLDEALEFFQAMRNSGLKLDTDS 649
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
+ +I L + +I A LF ++ G KPNVY+++ ++ LC+ G
Sbjct: 650 YSVVIDGLCKAGQIEVAKELFHELSVNGLKPNVYTYDIVINGLCKEG 696
>XP_016685402.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like isoform X1 [Gossypium hirsutum]
XP_016685403.1 PREDICTED: pentatricopeptide
repeat-containing protein At1g63330-like isoform X1
[Gossypium hirsutum] XP_016685405.1 PREDICTED:
pentatricopeptide repeat-containing protein
At1g63330-like isoform X1 [Gossypium hirsutum]
XP_016685406.1 PREDICTED: pentatricopeptide
repeat-containing protein At1g63330-like isoform X1
[Gossypium hirsutum]
Length = 771
Score = 99.0 bits (245), Expect = 7e-21
Identities = 59/175 (33%), Positives = 92/175 (52%)
Frame = -2
Query: 526 MLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCAL 347
ML +G+ + T S L++ + ++ + A+ L M + G+RPD CN VL L C
Sbjct: 139 MLKLGFEPNVVTLSTLINGLCNQSRVSQAVNLFYEMIEKGYRPDSFACNTVLNGL--CKS 196
Query: 346 KHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKR 167
++ R R A+ L +M V D ++ LI C C GKVD G S+L MLK
Sbjct: 197 GNTGRAVRMKHYALAVSLGSQMELWGVSHDAHSFNILINCFCQLGKVDFGFSVLGKMLKL 256
Query: 166 GCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
G + ++ LI L +N++++A LFD M GC+P+ ++N +L LC+TG
Sbjct: 257 GFEPDVVTLSTLINGLCNQNKVSQAASLFDEMIKKGCRPDSVAYNTVLNGLCKTG 311
Score = 67.8 bits (164), Expect = 5e-10
Identities = 43/167 (25%), Positives = 73/167 (43%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D+ + + L++ GK +L M KLGF PDVV + ++ L
Sbjct: 226 DAHSFNILINCFCQLGKVDFGFSVLGKMLKLGFEPDVVTLSTLINGLCN----------- 274
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
++A LF+EMI PD+ Y ++ C G + + L M +RG +
Sbjct: 275 QNKVSQAASLFDEMIKKGCRPDSVAYNTVLNGLCKTGNTGRAVKFLRMMNERGFEPNIRA 334
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
+ LI L + + EA LF + G +PN+ +N ++ +C +G
Sbjct: 335 YSTLIDCLCKNGLLNEAVDLFSEVNVKGIRPNIVIYNCLIHGMCNSG 381
Score = 67.0 bits (162), Expect = 9e-10
Identities = 43/165 (26%), Positives = 75/165 (45%)
Frame = -2
Query: 496 RTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESRSI 317
R S L+ + G A+ L + + G RP++VI N ++ + +H
Sbjct: 333 RAYSTLIDCLCKNGLLNEAVDLFSEVNVKGIRPNIVIYNCLIHGMCNSGQQHE------- 385
Query: 316 IANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMN 137
A +L EM+ V PD FTY LI C G + + +S+ M K+G + N
Sbjct: 386 ----ATKLLNEMVGNNVSPDIFTYNILIDAHCKEGTILEAVSIFNAMRKQGIKPDVVTYN 441
Query: 136 ALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
L+ +E I+E+ + M G +P+V +++ ++ A C+ G
Sbjct: 442 ILVDAWCKERLISESLDVVHTMRKQGIEPDVVTYSTLVDAHCKEG 486
Score = 63.5 bits (153), Expect = 1e-08
Identities = 43/167 (25%), Positives = 74/167 (44%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D T + L+ A +G A+ + N M K G +PDVV N ++ D +
Sbjct: 401 DIFTYNILIDAHCKEGTILEAVSIFNAMRKQGIKPDVVTYNILV-----------DAWCK 449
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
+ + +L++ M + PD TY L+ C G+V + ++ M K G +
Sbjct: 450 ERLISESLDVVHTMRKQGIEPDVVTYSTLVDAHCKEGRVSEAEDIVDTMRKEGIEPDVVT 509
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
N L+ +E I++A M G +P+V ++N + ALC+ G
Sbjct: 510 YNILVDVYCKERSISKAVDTIATMRKQGVEPDVVTYNIFINALCKNG 556
Score = 63.2 bits (152), Expect = 2e-08
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Frame = -2
Query: 442 ALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESRSIIANRALELF--EEMISIL 269
AL L N M +P +V + +L+++ R +KH AL +F +M
Sbjct: 62 ALSLFNKMIDECRKPSIVEFSILLQAIVR--MKHY-----------ALVVFLGSQMELRG 108
Query: 268 VIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNALIYELIRENRIAEAC 89
V + +++ LI C C GKVD G S+L MLK G + ++ LI L ++R+++A
Sbjct: 109 VSHNAYSFTILINCFCHLGKVDFGFSVLGKMLKLGFEPNVVTLSTLINGLCNQSRVSQAV 168
Query: 88 ILFDRMAAMGCKPNVYSFNAILKALCQTG 2
LF M G +P+ ++ N +L LC++G
Sbjct: 169 NLFYEMIEKGYRPDSFACNTVLNGLCKSG 197
Score = 58.9 bits (141), Expect = 5e-07
Identities = 42/167 (25%), Positives = 72/167 (43%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D T + ++A+ G A +++ M K P+ V ++ L C L
Sbjct: 541 DVVTYNIFINALCKNGMVSEAECIVDTMRKQCIEPNFVTYRTLM--LGMCELGR------ 592
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
+ A EL +M++ +PD T L+ GK+D+ L M G +
Sbjct: 593 ---VSTACELLRKMLTSGEVPDLMTISILLHDFRKTGKLDEALEFFQAMRNSGLKLDTDS 649
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
+ +I L + RI A LF ++ G KPNVY+++ ++ LC+ G
Sbjct: 650 YSVVIDGLCKAGRIEVAKELFHELSVNGLKPNVYTYDIVINGLCKEG 696
>XP_012454261.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like isoform X2 [Gossypium raimondii]
Length = 726
Score = 98.6 bits (244), Expect = 9e-21
Identities = 58/175 (33%), Positives = 93/175 (53%)
Frame = -2
Query: 526 MLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCAL 347
ML +G+ + T S L++ + ++ + A+ L M + G+RPD CN VL L C
Sbjct: 94 MLKLGFEPNVVTLSTLINGLCNQSRVSQAVDLFYEMIEKGYRPDSFACNTVLNGL--CKS 151
Query: 346 KHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKR 167
++ R R A+ L +M V D +++ LI C C GKVD G S+L MLK
Sbjct: 152 GNTGRAVRMKHYALAVSLGSQMELWGVSHDAYSFNILINCFCQLGKVDFGFSVLGKMLKL 211
Query: 166 GCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
G + ++ LI L ++++++A LFD M GC+P+ ++N +L LC+TG
Sbjct: 212 GFEPDVVTLSTLINGLCNQSKVSQAASLFDEMIKKGCRPDSVAYNTVLNGLCKTG 266
Score = 69.3 bits (168), Expect = 1e-10
Identities = 44/167 (26%), Positives = 76/167 (45%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D+ + + L++ GK +L M KLGF PDVV + ++ L +S+
Sbjct: 181 DAYSFNILINCFCQLGKVDFGFSVLGKMLKLGFEPDVVTLSTLINGLCN--------QSK 232
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
++A LF+EMI PD+ Y ++ C G + + L M +RG +
Sbjct: 233 ---VSQAASLFDEMIKKGCRPDSVAYNTVLNGLCKTGNTGRAVKFLRTMNERGFEPNIRA 289
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
+ LI L + + EA LF + G +PN+ +N ++ +C +G
Sbjct: 290 YSTLIDCLCKNGLLNEALDLFSEVKVKGIRPNIVIYNCLIHGMCNSG 336
Score = 65.9 bits (159), Expect = 2e-09
Identities = 44/167 (26%), Positives = 74/167 (44%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D T + L+ A +G A+ + N M K G +PDVV N V+ D +
Sbjct: 356 DIFTYNILIDAHCKEGTISEAVNIFNAMRKQGVKPDVVTYNIVV-----------DAWCK 404
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
+ + +L++ M + PD TY L+ C G+V + ++ M K G +
Sbjct: 405 ERLISESLDMVHTMRKQGIEPDVVTYSTLVDAHCKEGRVSEAEDIVDTMRKEGIEPDVVT 464
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
N L+ +E I++A M G +P+V ++N + ALC+ G
Sbjct: 465 YNILVDAYCKERSISKAVDTIATMRKQGVEPDVVTYNIFIDALCKNG 511
Score = 65.1 bits (157), Expect = 4e-09
Identities = 41/165 (24%), Positives = 74/165 (44%)
Frame = -2
Query: 496 RTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESRSI 317
R S L+ + G AL L + + G RP++VI N ++ + +
Sbjct: 288 RAYSTLIDCLCKNGLLNEALDLFSEVKVKGIRPNIVIYNCLIHGMCNSGQQQE------- 340
Query: 316 IANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMN 137
A +L EM+ V PD FTY LI C G + + +++ M K+G + N
Sbjct: 341 ----ATKLLNEMVGNNVSPDIFTYNILIDAHCKEGTISEAVNIFNAMRKQGVKPDVVTYN 396
Query: 136 ALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++ +E I+E+ + M G +P+V +++ ++ A C+ G
Sbjct: 397 IVVDAWCKERLISESLDMVHTMRKQGIEPDVVTYSTLVDAHCKEG 441
Score = 62.8 bits (151), Expect = 2e-08
Identities = 30/86 (34%), Positives = 50/86 (58%)
Frame = -2
Query: 259 DTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNALIYELIRENRIAEACILF 80
+ +++ LI C C GKVD G S+L MLK G + ++ LI L ++R+++A LF
Sbjct: 67 NAYSFTILINCFCHLGKVDFGFSVLGKMLKLGFEPNVVTLSTLINGLCNQSRVSQAVDLF 126
Query: 79 DRMAAMGCKPNVYSFNAILKALCQTG 2
M G +P+ ++ N +L LC++G
Sbjct: 127 YEMIEKGYRPDSFACNTVLNGLCKSG 152
Score = 59.3 bits (142), Expect = 4e-07
Identities = 42/167 (25%), Positives = 71/167 (42%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D T + + A+ G A +++ M K P+ V ++ L C L
Sbjct: 496 DVVTYNIFIDALCKNGMVSEAECIVDTMRKQCIEPNFVTYRTLM--LGMCQLGR------ 547
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
+ A EL +M++ +PD T L+ C GK+D+ L M G +
Sbjct: 548 ---ISTACELLRKMLTSGEVPDLMTISILLDDFCKRGKLDEALEFFQAMRNSGLKLDTDS 604
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
+I L + +I A LF ++ G KPNVY+++ ++ LC+ G
Sbjct: 605 YCVVIDGLCKAGQIEVAKELFHELSVNGLKPNVYTYDIVINGLCKEG 651
>XP_016699181.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like isoform X1 [Gossypium hirsutum]
XP_016699182.1 PREDICTED: pentatricopeptide
repeat-containing protein At1g63330-like isoform X1
[Gossypium hirsutum] XP_016699183.1 PREDICTED:
pentatricopeptide repeat-containing protein
At1g63330-like isoform X1 [Gossypium hirsutum]
XP_016699184.1 PREDICTED: pentatricopeptide
repeat-containing protein At1g63330-like isoform X1
[Gossypium hirsutum] XP_016699185.1 PREDICTED:
pentatricopeptide repeat-containing protein
At1g63330-like isoform X1 [Gossypium hirsutum]
XP_016699186.1 PREDICTED: pentatricopeptide
repeat-containing protein At1g63330-like isoform X1
[Gossypium hirsutum]
Length = 771
Score = 98.6 bits (244), Expect = 1e-20
Identities = 58/175 (33%), Positives = 93/175 (53%)
Frame = -2
Query: 526 MLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCAL 347
ML +G+ + T S L++ + ++ + A+ L M + G+RPD CN VL L C
Sbjct: 139 MLKLGFEPNVVTLSTLINGLCNQSRVSQAVNLFYEMIEKGYRPDSFACNTVLNGL--CKS 196
Query: 346 KHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKR 167
++ R R A+ L +M V D +++ LI C C GKVD G S+L MLK
Sbjct: 197 GNTGRAVRMKHYALAVSLGSQMELWGVSHDAYSFNILINCFCQLGKVDFGFSVLGKMLKL 256
Query: 166 GCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
G + ++ LI L ++++++A LFD M GC+P+ ++N +L LC+TG
Sbjct: 257 GFEPDVVTLSTLINGLCNQSKVSQAASLFDEMIKKGCRPDSVAYNTVLNGLCKTG 311
Score = 69.3 bits (168), Expect = 1e-10
Identities = 44/167 (26%), Positives = 76/167 (45%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D+ + + L++ GK +L M KLGF PDVV + ++ L +S+
Sbjct: 226 DAYSFNILINCFCQLGKVDFGFSVLGKMLKLGFEPDVVTLSTLINGLCN--------QSK 277
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
++A LF+EMI PD+ Y ++ C G + + L M +RG +
Sbjct: 278 ---VSQAASLFDEMIKKGCRPDSVAYNTVLNGLCKTGNTGRAVKFLRTMNERGFEPNIRA 334
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
+ LI L + + EA LF + G +PN+ +N ++ +C +G
Sbjct: 335 YSTLIDCLCKNGLLNEALDLFSEVKVKGIRPNIVIYNCLIHGMCNSG 381
Score = 65.9 bits (159), Expect = 2e-09
Identities = 44/167 (26%), Positives = 74/167 (44%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D T + L+ A +G A+ + N M K G +PDVV N V+ D +
Sbjct: 401 DIFTYNILIDAHCKEGTISEAVNIFNAMRKQGVKPDVVTYNIVV-----------DAWCK 449
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
+ + +L++ M + PD TY L+ C G+V + ++ M K G +
Sbjct: 450 ERLISESLDMVHTMRKQGIEPDVVTYSTLVDAHCKEGRVSEAEDIVDTMRKEGIEPDVVT 509
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
N L+ +E I++A M G +P+V ++N + ALC+ G
Sbjct: 510 YNILVDAYCKERSISKAVDTIATMRKQGVEPDVVTYNIFIDALCKNG 556
Score = 65.1 bits (157), Expect = 4e-09
Identities = 41/165 (24%), Positives = 74/165 (44%)
Frame = -2
Query: 496 RTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESRSI 317
R S L+ + G AL L + + G RP++VI N ++ + +
Sbjct: 333 RAYSTLIDCLCKNGLLNEALDLFSEVKVKGIRPNIVIYNCLIHGMCNSGQQQE------- 385
Query: 316 IANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMN 137
A +L EM+ V PD FTY LI C G + + +++ M K+G + N
Sbjct: 386 ----ATKLLNEMVGNNVSPDIFTYNILIDAHCKEGTISEAVNIFNAMRKQGVKPDVVTYN 441
Query: 136 ALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++ +E I+E+ + M G +P+V +++ ++ A C+ G
Sbjct: 442 IVVDAWCKERLISESLDMVHTMRKQGIEPDVVTYSTLVDAHCKEG 486
Score = 62.8 bits (151), Expect = 3e-08
Identities = 30/86 (34%), Positives = 50/86 (58%)
Frame = -2
Query: 259 DTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNALIYELIRENRIAEACILF 80
+ +++ LI C C GKVD G S+L MLK G + ++ LI L ++R+++A LF
Sbjct: 112 NAYSFTILINCFCHLGKVDFGFSVLGKMLKLGFEPNVVTLSTLINGLCNQSRVSQAVNLF 171
Query: 79 DRMAAMGCKPNVYSFNAILKALCQTG 2
M G +P+ ++ N +L LC++G
Sbjct: 172 YEMIEKGYRPDSFACNTVLNGLCKSG 197
Score = 61.2 bits (147), Expect = 8e-08
Identities = 43/167 (25%), Positives = 71/167 (42%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D T + + A+ G A +++ M K P+ V ++ L C L
Sbjct: 541 DVVTYNIFIDALCKNGMVSEAECIVDTMRKQCIEPNFVTYRTLM--LGMCQLGR------ 592
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
+ A EL +M++ +PD T L+ C GK+D+ L M G +
Sbjct: 593 ---VSTACELLRKMLTSGEVPDLMTISILLDDFCKRGKLDEALEFFQAMRNSGLKLDTDS 649
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
+I L + +I A LF ++ G KPNVY+++ ++ LCQ G
Sbjct: 650 YCVVIDGLCKAGQIEVAKELFHELSVNGLKPNVYTYDIVINGLCQEG 696
>XP_012454260.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like isoform X1 [Gossypium raimondii]
Length = 771
Score = 98.6 bits (244), Expect = 1e-20
Identities = 58/175 (33%), Positives = 93/175 (53%)
Frame = -2
Query: 526 MLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCAL 347
ML +G+ + T S L++ + ++ + A+ L M + G+RPD CN VL L C
Sbjct: 139 MLKLGFEPNVVTLSTLINGLCNQSRVSQAVDLFYEMIEKGYRPDSFACNTVLNGL--CKS 196
Query: 346 KHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKR 167
++ R R A+ L +M V D +++ LI C C GKVD G S+L MLK
Sbjct: 197 GNTGRAVRMKHYALAVSLGSQMELWGVSHDAYSFNILINCFCQLGKVDFGFSVLGKMLKL 256
Query: 166 GCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
G + ++ LI L ++++++A LFD M GC+P+ ++N +L LC+TG
Sbjct: 257 GFEPDVVTLSTLINGLCNQSKVSQAASLFDEMIKKGCRPDSVAYNTVLNGLCKTG 311
Score = 69.3 bits (168), Expect = 1e-10
Identities = 44/167 (26%), Positives = 76/167 (45%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D+ + + L++ GK +L M KLGF PDVV + ++ L +S+
Sbjct: 226 DAYSFNILINCFCQLGKVDFGFSVLGKMLKLGFEPDVVTLSTLINGLCN--------QSK 277
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
++A LF+EMI PD+ Y ++ C G + + L M +RG +
Sbjct: 278 ---VSQAASLFDEMIKKGCRPDSVAYNTVLNGLCKTGNTGRAVKFLRTMNERGFEPNIRA 334
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
+ LI L + + EA LF + G +PN+ +N ++ +C +G
Sbjct: 335 YSTLIDCLCKNGLLNEALDLFSEVKVKGIRPNIVIYNCLIHGMCNSG 381
Score = 65.9 bits (159), Expect = 2e-09
Identities = 44/167 (26%), Positives = 74/167 (44%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D T + L+ A +G A+ + N M K G +PDVV N V+ D +
Sbjct: 401 DIFTYNILIDAHCKEGTISEAVNIFNAMRKQGVKPDVVTYNIVV-----------DAWCK 449
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
+ + +L++ M + PD TY L+ C G+V + ++ M K G +
Sbjct: 450 ERLISESLDMVHTMRKQGIEPDVVTYSTLVDAHCKEGRVSEAEDIVDTMRKEGIEPDVVT 509
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
N L+ +E I++A M G +P+V ++N + ALC+ G
Sbjct: 510 YNILVDAYCKERSISKAVDTIATMRKQGVEPDVVTYNIFIDALCKNG 556
Score = 65.1 bits (157), Expect = 4e-09
Identities = 41/165 (24%), Positives = 74/165 (44%)
Frame = -2
Query: 496 RTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESRSI 317
R S L+ + G AL L + + G RP++VI N ++ + +
Sbjct: 333 RAYSTLIDCLCKNGLLNEALDLFSEVKVKGIRPNIVIYNCLIHGMCNSGQQQE------- 385
Query: 316 IANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMN 137
A +L EM+ V PD FTY LI C G + + +++ M K+G + N
Sbjct: 386 ----ATKLLNEMVGNNVSPDIFTYNILIDAHCKEGTISEAVNIFNAMRKQGVKPDVVTYN 441
Query: 136 ALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++ +E I+E+ + M G +P+V +++ ++ A C+ G
Sbjct: 442 IVVDAWCKERLISESLDMVHTMRKQGIEPDVVTYSTLVDAHCKEG 486
Score = 62.8 bits (151), Expect = 3e-08
Identities = 30/86 (34%), Positives = 50/86 (58%)
Frame = -2
Query: 259 DTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNALIYELIRENRIAEACILF 80
+ +++ LI C C GKVD G S+L MLK G + ++ LI L ++R+++A LF
Sbjct: 112 NAYSFTILINCFCHLGKVDFGFSVLGKMLKLGFEPNVVTLSTLINGLCNQSRVSQAVDLF 171
Query: 79 DRMAAMGCKPNVYSFNAILKALCQTG 2
M G +P+ ++ N +L LC++G
Sbjct: 172 YEMIEKGYRPDSFACNTVLNGLCKSG 197
Score = 59.3 bits (142), Expect = 4e-07
Identities = 42/167 (25%), Positives = 71/167 (42%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D T + + A+ G A +++ M K P+ V ++ L C L
Sbjct: 541 DVVTYNIFIDALCKNGMVSEAECIVDTMRKQCIEPNFVTYRTLM--LGMCQLGR------ 592
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
+ A EL +M++ +PD T L+ C GK+D+ L M G +
Sbjct: 593 ---ISTACELLRKMLTSGEVPDLMTISILLDDFCKRGKLDEALEFFQAMRNSGLKLDTDS 649
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
+I L + +I A LF ++ G KPNVY+++ ++ LC+ G
Sbjct: 650 YCVVIDGLCKAGQIEVAKELFHELSVNGLKPNVYTYDIVINGLCKEG 696
>5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8a2 In Complex With Its Target Rna U8a2
Length = 460
Score = 95.5 bits (236), Expect = 8e-20
Identities = 58/177 (32%), Positives = 88/177 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 110 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 169
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 170 GK-----------LDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMV 218
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++G + + LI L + ++ EA LF+ M G KPNV ++N ++ LC+ G
Sbjct: 219 EKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAG 275
Score = 92.0 bits (227), Expect = 1e-18
Identities = 57/177 (32%), Positives = 88/177 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G + T S L+ + GK AL L M + G +P+VV N ++ L +
Sbjct: 215 EEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKA 274
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 275 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 323
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++G + N LI L + ++ EA LF+ M G KP+V ++N ++ LC+ G
Sbjct: 324 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 380
Score = 91.7 bits (226), Expect = 2e-18
Identities = 56/177 (31%), Positives = 88/177 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T + L+ + GK AL L M + G +PDVV + ++ L +
Sbjct: 145 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKA 204
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + P+ TY LI C AGK+D+ L L +M+
Sbjct: 205 GK-----------LDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMV 253
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++G + N LI L + ++ EA LF+ M G KP+V ++N ++ LC+ G
Sbjct: 254 EKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 310
Score = 90.1 bits (222), Expect = 6e-18
Identities = 53/164 (32%), Positives = 83/164 (50%)
Frame = -2
Query: 493 TCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESRSII 314
T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 53 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK----------- 101
Query: 313 ANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNA 134
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+++G + N
Sbjct: 102 LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNT 161
Query: 133 LIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
LI L + ++ EA LF+ M G KP+V +++ ++ LC+ G
Sbjct: 162 LIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAG 205
Score = 87.8 bits (216), Expect = 4e-17
Identities = 56/177 (31%), Positives = 88/177 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E+ L G LD R + ++ A+ G+ AL L + + G P VV N ++ L +
Sbjct: 5 ETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKA 64
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 65 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 113
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++G + N LI L + ++ EA LF+ M G KP+V ++N ++ LC+ G
Sbjct: 114 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 170
Score = 84.7 bits (208), Expect = 5e-16
Identities = 53/175 (30%), Positives = 86/175 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G + T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 250 EEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 309
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 310 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 358
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQ 8
++G + N LI L + ++ EA LF+ M G KP+ ++ ++++ C+
Sbjct: 359 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCR 413
Score = 67.4 bits (163), Expect = 6e-10
Identities = 45/147 (30%), Positives = 67/147 (45%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 285 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 344
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 345 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 393
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEA 92
++G + ++ R R EA
Sbjct: 394 EKGIKPDELTYRRVVESYCRAKRFEEA 420
>5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8c2 In Complex With Its Target Rna U8c2
Length = 460
Score = 95.1 bits (235), Expect = 1e-19
Identities = 58/177 (32%), Positives = 88/177 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 110 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 169
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 170 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 218
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++G + N LI L + ++ EA LF+ M G KP+V ++N ++ LC+ G
Sbjct: 219 EKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAG 275
Score = 92.8 bits (229), Expect = 7e-19
Identities = 57/177 (32%), Positives = 87/177 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 145 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 204
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + P TY LI C AGK+D+ L L +M+
Sbjct: 205 GK-----------LDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMV 253
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++G + N LI L + ++ EA LF+ M G KP+V ++N ++ LC+ G
Sbjct: 254 EKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 310
Score = 92.0 bits (227), Expect = 1e-18
Identities = 54/164 (32%), Positives = 83/164 (50%)
Frame = -2
Query: 493 TCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESRSII 314
T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 53 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK----------- 101
Query: 313 ANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNA 134
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+++G + N
Sbjct: 102 LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNT 161
Query: 133 LIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
LI L + ++ EA LF+ M G KP+V ++N ++ LC+ G
Sbjct: 162 LIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 205
Score = 90.1 bits (222), Expect = 6e-18
Identities = 56/177 (31%), Positives = 86/177 (48%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G T + L+ + GK AL L M + G +P VV N ++ L +
Sbjct: 215 EEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKA 274
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 275 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 323
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++G + N LI L + ++ EA LF+ M G KP+V ++N ++ LC+ G
Sbjct: 324 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 380
Score = 87.8 bits (216), Expect = 4e-17
Identities = 56/177 (31%), Positives = 88/177 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E+ L G LD R + ++ A+ G+ AL L + + G P VV N ++ L +
Sbjct: 5 ETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKA 64
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 65 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 113
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++G + N LI L + ++ EA LF+ M G KP+V ++N ++ LC+ G
Sbjct: 114 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 170
Score = 84.3 bits (207), Expect = 7e-16
Identities = 53/175 (30%), Positives = 85/175 (48%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 250 EEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 309
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 310 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 358
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQ 8
++G + N LI L + ++ EA LF+ M G KP+ ++ ++++ C+
Sbjct: 359 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCR 413
Score = 67.4 bits (163), Expect = 6e-10
Identities = 45/147 (30%), Positives = 67/147 (45%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 285 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 344
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 345 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 393
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEA 92
++G + ++ R R EA
Sbjct: 394 EKGIKPDELTYRRVVESYCRAKRFEEA 420
>5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8g2 In Complex With Its Target Rna U8g2
Length = 460
Score = 94.7 bits (234), Expect = 1e-19
Identities = 58/177 (32%), Positives = 88/177 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 215 EEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 274
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 275 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 323
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++G + N LI L + ++ EA LF+ M G KP+V ++N ++ LC+ G
Sbjct: 324 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 380
Score = 92.8 bits (229), Expect = 7e-19
Identities = 57/177 (32%), Positives = 87/177 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T + L+ + GK AL L M + G +PDVV ++ L +
Sbjct: 145 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKA 204
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 205 GK-----------LDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMV 253
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++G + N LI L + ++ EA LF+ M G KP+V ++N ++ LC+ G
Sbjct: 254 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 310
Score = 92.4 bits (228), Expect = 9e-19
Identities = 57/177 (32%), Positives = 87/177 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T + L+ + GK AL L M + G +PDVV ++ L +
Sbjct: 180 EEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKA 239
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 240 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 288
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++G + N LI L + ++ EA LF+ M G KP+V ++N ++ LC+ G
Sbjct: 289 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 345
Score = 90.1 bits (222), Expect = 6e-18
Identities = 56/177 (31%), Positives = 86/177 (48%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 75 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 134
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 135 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 183
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++G + LI L + ++ EA LF+ M G KP+V ++ ++ LC+ G
Sbjct: 184 EKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAG 240
Score = 89.7 bits (221), Expect = 9e-18
Identities = 53/164 (32%), Positives = 82/164 (50%)
Frame = -2
Query: 493 TCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESRSII 314
T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 53 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK----------- 101
Query: 313 ANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNA 134
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+++G + N
Sbjct: 102 LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNT 161
Query: 133 LIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
LI L + ++ EA LF+ M G KP+V ++ ++ LC+ G
Sbjct: 162 LIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAG 205
Score = 87.8 bits (216), Expect = 4e-17
Identities = 56/177 (31%), Positives = 88/177 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E+ L G LD R + ++ A+ G+ AL L + + G P VV N ++ L +
Sbjct: 5 ETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKA 64
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 65 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 113
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++G + N LI L + ++ EA LF+ M G KP+V ++N ++ LC+ G
Sbjct: 114 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 170
Score = 86.7 bits (213), Expect = 1e-16
Identities = 54/175 (30%), Positives = 86/175 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 250 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 309
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 310 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 358
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQ 8
++G + N LI L + ++ EA LF+ M G KP+ ++ ++++ C+
Sbjct: 359 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCR 413
Score = 67.4 bits (163), Expect = 6e-10
Identities = 45/147 (30%), Positives = 67/147 (45%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 285 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 344
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 345 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 393
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEA 92
++G + ++ R R EA
Sbjct: 394 EKGIKPDELTYRRVVESYCRAKRFEEA 420
>5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U10 In Complex With Its Target Rna U10
Length = 460
Score = 94.7 bits (234), Expect = 1e-19
Identities = 58/177 (32%), Positives = 88/177 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 75 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 134
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 135 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 183
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++G + N LI L + ++ EA LF+ M G KP+V ++N ++ LC+ G
Sbjct: 184 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 240
Score = 94.7 bits (234), Expect = 1e-19
Identities = 58/177 (32%), Positives = 88/177 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 110 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 169
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 170 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 218
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++G + N LI L + ++ EA LF+ M G KP+V ++N ++ LC+ G
Sbjct: 219 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 275
Score = 94.7 bits (234), Expect = 1e-19
Identities = 58/177 (32%), Positives = 88/177 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 145 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 204
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 205 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 253
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++G + N LI L + ++ EA LF+ M G KP+V ++N ++ LC+ G
Sbjct: 254 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 310
Score = 94.7 bits (234), Expect = 1e-19
Identities = 58/177 (32%), Positives = 88/177 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 180 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 239
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 240 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 288
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++G + N LI L + ++ EA LF+ M G KP+V ++N ++ LC+ G
Sbjct: 289 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 345
Score = 94.7 bits (234), Expect = 1e-19
Identities = 58/177 (32%), Positives = 88/177 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 215 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 274
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 275 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 323
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++G + N LI L + ++ EA LF+ M G KP+V ++N ++ LC+ G
Sbjct: 324 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 380
Score = 92.0 bits (227), Expect = 1e-18
Identities = 54/164 (32%), Positives = 83/164 (50%)
Frame = -2
Query: 493 TCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESRSII 314
T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 53 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK----------- 101
Query: 313 ANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNA 134
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+++G + N
Sbjct: 102 LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNT 161
Query: 133 LIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
LI L + ++ EA LF+ M G KP+V ++N ++ LC+ G
Sbjct: 162 LIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 205
Score = 87.8 bits (216), Expect = 4e-17
Identities = 56/177 (31%), Positives = 88/177 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E+ L G LD R + ++ A+ G+ AL L + + G P VV N ++ L +
Sbjct: 5 ETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKA 64
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 65 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 113
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
++G + N LI L + ++ EA LF+ M G KP+V ++N ++ LC+ G
Sbjct: 114 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 170
Score = 86.7 bits (213), Expect = 1e-16
Identities = 54/175 (30%), Positives = 86/175 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 250 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 309
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 310 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 358
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQ 8
++G + N LI L + ++ EA LF+ M G KP+ ++ ++++ C+
Sbjct: 359 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCR 413
Score = 67.4 bits (163), Expect = 6e-10
Identities = 45/147 (30%), Positives = 67/147 (45%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T + L+ + GK AL L M + G +PDVV N ++ L +
Sbjct: 285 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 344
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ AL+LFEEM+ + PD TY LI C AGK+D+ L L +M+
Sbjct: 345 GK-----------LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 393
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEA 92
++G + ++ R R EA
Sbjct: 394 EKGIKPDELTYRRVVESYCRAKRFEEA 420
>XP_002989829.1 hypothetical protein SELMODRAFT_42426, partial [Selaginella
moellendorffii] EFJ09096.1 hypothetical protein
SELMODRAFT_42426, partial [Selaginella moellendorffii]
Length = 331
Score = 91.3 bits (225), Expect = 9e-19
Identities = 54/165 (32%), Positives = 89/165 (53%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D + S +VSA+ D+ + A+ LL M + F PDV I NR++ ++S L
Sbjct: 88 DLESYSIVVSALCDEKRVDKAVDLLYSMNEESFLPDVGIYNRIIEAMSELQL-------- 139
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
+ A LFE+MI V+P++ T+ FL++ C G +D+G LL M++ GC +
Sbjct: 140 ----HGAYLLFEQMIEAGVLPNSATFSFLVRGCFKRGFLDEGSELLRQMVESGCVPELAT 195
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQ 8
NA+I L + R+ A + + MA+ GC P+ + +L+ALC+
Sbjct: 196 FNAVIEGLCKVRRVENARWVMNEMASQGCSPDAATHRFLLEALCK 240
Score = 61.6 bits (148), Expect = 5e-08
Identities = 48/174 (27%), Positives = 76/174 (43%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G L +S T S LV + +G LL M + G P++ N V+ L C
Sbjct: 147 EQMIEAGVLPNSATFSFLVRGCFKRGFLDEGSELLRQMVESGCVPELATFNAVIEGL--C 204
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
++ + A + EM S PD T+ FL++ C K+D+ + M+
Sbjct: 205 KVRRVEN---------ARWVMNEMASQGCSPDAATHRFLLEALCKMDKLDEAHRHVQRMI 255
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALC 11
GC + LI +L +E R EA F M +G +P+ +N +L + C
Sbjct: 256 ATGCLPDTVTYSFLIKKLCKEGRPMEAHRFFKEMIGIGREPDSSIYNLLLASHC 309
>XP_002991993.1 hypothetical protein SELMODRAFT_42424, partial [Selaginella
moellendorffii] EFJ06961.1 hypothetical protein
SELMODRAFT_42424, partial [Selaginella moellendorffii]
Length = 331
Score = 91.3 bits (225), Expect = 9e-19
Identities = 54/165 (32%), Positives = 89/165 (53%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D + S +VSA+ D+ + A+ LL M + F PDV I NR++ ++S L
Sbjct: 88 DLESYSIVVSALCDEKRVDKAVDLLYSMNEESFLPDVGIYNRIIEAMSELQL-------- 139
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
+ A LFE+MI V+P++ T+ FL++ C G +D+G LL M++ GC +
Sbjct: 140 ----HGAYLLFEQMIEAGVLPNSATFSFLVRGCFKRGFLDEGSELLRQMVESGCVPELAT 195
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQ 8
NA+I L + R+ A + + MA+ GC P+ + +L+ALC+
Sbjct: 196 FNAVIEGLCKVRRVENARWVMNEMASQGCSPDAATHRFLLEALCK 240
Score = 62.4 bits (150), Expect = 2e-08
Identities = 48/174 (27%), Positives = 77/174 (44%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G L +S T S LV + +G LL M + G P++ N V+ L C
Sbjct: 147 EQMIEAGVLPNSATFSFLVRGCFKRGFLDEGSELLRQMVESGCVPELATFNAVIEGL--C 204
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
++ + A + EM S PD T+ FL++ C K+D+ + M+
Sbjct: 205 KVRRVEN---------ARWVMNEMASQGCSPDAATHRFLLEALCKMDKLDEAHRHVQRMI 255
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALC 11
GC + LI +L +E R EA +F M +G +P+ +N +L + C
Sbjct: 256 ATGCLPDTVTYSFLIKKLCKEGRPMEAHRIFKEMIGIGREPDSSIYNLLLASHC 309
>EPS61251.1 hypothetical protein M569_13548, partial [Genlisea aurea]
Length = 488
Score = 92.0 bits (227), Expect = 1e-18
Identities = 58/167 (34%), Positives = 83/167 (49%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D T + L+S G+ G AL LL M PDVV N +LR+L R
Sbjct: 66 DLITYNVLISGFCKLGEVGNALQLLESMT---VAPDVVTYNTILRALCNGGGGGGGGRGR 122
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
+ A+E+ + M+ PD TY LI+ VDQ + LL DM +RGC+
Sbjct: 123 ---LSEAMEVIDRMLLKECHPDVITYTILIEATLKENGVDQAMELLDDMKRRGCKPDIVT 179
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
N LI + +E ++ EA D M++ GC+PNV + N IL+++C TG
Sbjct: 180 YNVLIDGICKEGKLDEAIKFLDTMSSYGCRPNVITHNIILRSMCSTG 226
Score = 70.5 bits (171), Expect = 5e-11
Identities = 47/177 (26%), Positives = 81/177 (45%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
+ M G D T + L+ + +GK A+ L+ M G RP+V+ N +LRS+
Sbjct: 166 DDMKRRGCKPDIVTYNVLIDGICKEGKLDEAIKFLDTMSSYGCRPNVITHNIILRSMCST 225
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+ D E +L EM+ P T+ LI C G + + + +L M
Sbjct: 226 G-RWMDAE----------KLLSEMLVKGCSPSVVTFNILINFLCRKGLLLRAVDVLERMP 274
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
+ GC N+L++ +E ++ A + M + GC P++ ++N +L ALC+ G
Sbjct: 275 ENGCTPNSLSYNSLLHTFCKEKKMDSALEYLELMVSRGCYPDIVTYNTMLTALCRDG 331
Score = 68.2 bits (165), Expect = 3e-10
Identities = 44/165 (26%), Positives = 78/165 (47%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D T + L+ A + A+ LL+ M + G +PD+V N ++ + + E +
Sbjct: 141 DVITYTILIEATLKENGVDQAMELLDDMKRRGCKPDIVTYNVLIDGICK--------EGK 192
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
+ A++ + M S P+ T+ +++ CS G+ LL++ML +GC
Sbjct: 193 ---LDEAIKFLDTMSSYGCRPNVITHNIILRSMCSTGRWMDAEKLLSEMLVKGCSPSVVT 249
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQ 8
N LI L R+ + A + +RM GC PN S+N++L C+
Sbjct: 250 FNILINFLCRKGLLLRAVDVLERMPENGCTPNSLSYNSLLHTFCK 294
>XP_006836883.1 PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial [Amborella trichopoda] ERM99736.1
hypothetical protein AMTR_s00099p00108770 [Amborella
trichopoda]
Length = 712
Score = 90.5 bits (223), Expect = 6e-18
Identities = 55/171 (32%), Positives = 84/171 (49%)
Frame = -2
Query: 514 GWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSD 335
G + + T + L+ A+ +G A L+N M GF DV+ N +++L R
Sbjct: 514 GLIPSNTTYNTLIGALLRRGSIEEAQNLVNEMIFRGFSLDVITYNSFIKALCREG----- 568
Query: 334 RESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQA 155
+ RAL LFE+M+ V P+ +Y LI C G + GL LL +ML RGC
Sbjct: 569 ------VIERALGLFEDMVRRGVAPNNISYNILINGICKTGNIQSGLELLKEMLHRGCMP 622
Query: 154 KRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
N+LI L + R+ EA LF+R+ G KP+ ++N ++ C+ G
Sbjct: 623 DVVTYNSLINGLCKSGRMGEALNLFERLQGEGIKPDTVTYNTLISWHCKEG 673
Score = 68.9 bits (167), Expect = 2e-10
Identities = 31/99 (31%), Positives = 57/99 (57%)
Frame = -2
Query: 304 ALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNALIY 125
A L +EM+ +P+ Y L+ C A ++++ ++ +M +G N +I+
Sbjct: 398 ARRLLDEMLMKGCMPNVVIYTILVDGLCKARRLEEAFEVVEEMSTQGISLNVVCYNCIIH 457
Query: 124 ELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQ 8
L ++ RI +A LFDRM+ GCKP++++FN+++ LCQ
Sbjct: 458 ALCKDQRINQAMRLFDRMSQEGCKPDIFTFNSLIHGLCQ 496
Score = 63.2 bits (152), Expect = 2e-08
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 1/172 (0%)
Frame = -2
Query: 514 GWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSD 335
G + +S L+ A + + LL+ M +G PD+ N + L C H
Sbjct: 237 GCVPNSVIYQTLIHAFVKEDNVNDGVKLLDEMLLMGCVPDLETFNDAVGGL--CKKGH-- 292
Query: 334 RESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQA 155
A+++ + MI P+ TY LI+ C G VD+ +LL ++ +
Sbjct: 293 -------VVEAVKMVDRMIIHGSTPNALTYGILIRGFCKRGMVDEANALLRELSEPNVI- 344
Query: 154 KRGMMNALIYELIRENRIAEA-CILFDRMAAMGCKPNVYSFNAILKALCQTG 2
M N LI+ ++E R +EA ++ + M GC+PNVY++ ++ ALC+ G
Sbjct: 345 ---MYNTLIHGYLKEGRFSEAKTLMHENMLKKGCEPNVYTYGIMMDALCKVG 393
Score = 62.4 bits (150), Expect = 3e-08
Identities = 46/177 (25%), Positives = 79/177 (44%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M G L+ + ++ A+ + A+ L + M + G +PD+ N ++ L +
Sbjct: 438 EEMSTQGISLNVVCYNCIIHALCKDQRINQAMRLFDRMSQEGCKPDIFTFNSLIHGLCQ- 496
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
DR A E+ +++ +IP TY LI G +++ +L+ +M+
Sbjct: 497 ----DDR------LEEAFEVCRDLLVHGLIPSNTTYNTLIGALLRRGSIEEAQNLVNEMI 546
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
RG N+ I L RE I A LF+ M G PN S+N ++ +C+TG
Sbjct: 547 FRGFSLDVITYNSFIKALCREGVIERALGLFEDMVRRGVAPNNISYNILINGICKTG 603
Score = 61.6 bits (148), Expect = 6e-08
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 24/201 (11%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E+ML G + T ++ A+ G G+A LL+ M G P+VVI ++ L +
Sbjct: 368 ENMLKKGCEPNVYTYGIMMDALCKVGNVGSARRLLDEMLMKGCMPNVVIYTILVDGLCKA 427
Query: 352 ALKHSDRE----------SRSIIA--------------NRALELFEEMISILVIPDTFTY 245
E S +++ N+A+ LF+ M PD FT+
Sbjct: 428 RRLEEAFEVVEEMSTQGISLNVVCYNCIIHALCKDQRINQAMRLFDRMSQEGCKPDIFTF 487
Query: 244 FFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNALIYELIRENRIAEACILFDRMAA 65
LI C ++++ + D+L G N LI L+R I EA L + M
Sbjct: 488 NSLIHGLCQDDRLEEAFEVCRDLLVHGLIPSNTTYNTLIGALLRRGSIEEAQNLVNEMIF 547
Query: 64 MGCKPNVYSFNAILKALCQTG 2
G +V ++N+ +KALC+ G
Sbjct: 548 RGFSLDVITYNSFIKALCREG 568
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/98 (27%), Positives = 49/98 (50%)
Frame = -2
Query: 295 LFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNALIYELI 116
+F M++ + P +T+ +K C + +LL +M K GC + LI+ +
Sbjct: 194 VFFTMLNRGISPTVYTFGVAMKALCLTKQAGNACALLREMTKHGCVPNSVIYQTLIHAFV 253
Query: 115 RENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
+E+ + + L D M MGC P++ +FN + LC+ G
Sbjct: 254 KEDNVNDGVKLLDEMLLMGCVPDLETFNDAVGGLCKKG 291
>NP_176496.1 Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis
thaliana] NP_001319297.1 Pentatricopeptide repeat (PPR)
superfamily protein [Arabidopsis thaliana]
NP_001321279.1 Pentatricopeptide repeat (PPR)
superfamily protein [Arabidopsis thaliana] Q9CAN5.1
RecName: Full=Pentatricopeptide repeat-containing
protein At1g63080, mitochondrial; Flags: Precursor
AAG51614.1 unknown protein; 41955-40111 [Arabidopsis
thaliana] AEE34051.1 Pentatricopeptide repeat (PPR)
superfamily protein [Arabidopsis thaliana] ANM58874.1
Pentatricopeptide repeat (PPR) superfamily protein
[Arabidopsis thaliana] ANM58875.1 Pentatricopeptide
repeat (PPR) superfamily protein [Arabidopsis thaliana]
Length = 614
Score = 90.1 bits (222), Expect = 8e-18
Identities = 60/174 (34%), Positives = 86/174 (49%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T A+++ + +G+ AL LLN M K DVVI + V+ SL C
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL--C 251
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
+H D AL LF EM + + PD FTY LI C C+ G+ LL+DML
Sbjct: 252 KYRHVDD---------ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALC 11
+R N+LI +E ++ EA LFD M PN+ ++N+++ C
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Score = 66.6 bits (161), Expect = 1e-09
Identities = 46/164 (28%), Positives = 75/164 (45%)
Frame = -2
Query: 493 TCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESRSII 314
T ++L+ A +GK A L + M + P++V N ++ DR
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM-----HDR------ 360
Query: 313 ANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNA 134
+ A ++F M+S +PD TY LI C A KV G+ L DM +RG
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 133 LIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
LI+ + + A ++F +M + G PN+ ++N +L LC+ G
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Score = 65.1 bits (157), Expect = 4e-09
Identities = 44/175 (25%), Positives = 85/175 (48%)
Frame = -2
Query: 526 MLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCAL 347
M+ +G+ T ++L++ + A+ L++ M ++G++PD V ++ L
Sbjct: 126 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL----F 181
Query: 346 KHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKR 167
+H+ A+ A+ L E M+ PD TY +I C G+ D L+LL M K
Sbjct: 182 QHNK-------ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 234
Query: 166 GCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
+A + + +I L + + +A LF M G +P+V+++++++ LC G
Sbjct: 235 KIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/101 (25%), Positives = 53/101 (52%)
Frame = -2
Query: 304 ALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNALIY 125
AL + +M+ + P T L+ C ++ + ++L+ M++ G Q L++
Sbjct: 119 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 178
Query: 124 ELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
L + N+ +EA L +RM GC+P++ ++ A++ LC+ G
Sbjct: 179 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
>NP_176495.1 pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana] Q9CAN6.1 RecName: Full=Pentatricopeptide
repeat-containing protein At1g63070, mitochondrial;
Flags: Precursor AAG51617.1 unknown protein; 38394-36551
[Arabidopsis thaliana] AEE34050.1 pentatricopeptide
(PPR) repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 89.7 bits (221), Expect = 1e-17
Identities = 59/176 (33%), Positives = 89/176 (50%), Gaps = 1/176 (0%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D T A+++ + +G+ AL LLN M K DVVI N ++ L C
Sbjct: 204 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL--C 261
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
KH D A +LF +M + + PD FTY LI C C+ G+ LL+DML
Sbjct: 262 KYKHMDD---------AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMA-AMGCKPNVYSFNAILKALCQ 8
++ NALI ++E ++ EA L+D M + C P+V ++N ++K C+
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Score = 70.5 bits (171), Expect = 5e-11
Identities = 47/175 (26%), Positives = 86/175 (49%)
Frame = -2
Query: 526 MLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCAL 347
M+ +G+ T ++L++ + A+ L++ M ++G++PD V ++ L
Sbjct: 136 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL----F 191
Query: 346 KHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKR 167
+H+ A+ A+ L E M+ PD TY +I C G+ D L+LL M K
Sbjct: 192 QHNK-------ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 244
Query: 166 GCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
+A + N +I L + + +A LF++M G KP+V+++N ++ LC G
Sbjct: 245 KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG 299
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/101 (25%), Positives = 53/101 (52%)
Frame = -2
Query: 304 ALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNALIY 125
AL + +M+ + P T L+ C ++ + ++L+ M++ G Q L++
Sbjct: 129 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 188
Query: 124 ELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
L + N+ +EA L +RM GC+P++ ++ A++ LC+ G
Sbjct: 189 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 229
>XP_010671063.1 PREDICTED: pentatricopeptide repeat-containing protein At1g09900
[Beta vulgaris subsp. vulgaris] KMT20537.1 hypothetical
protein BVRB_1g005210 [Beta vulgaris subsp. vulgaris]
Length = 613
Score = 89.7 bits (221), Expect = 1e-17
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 21/198 (10%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
ESM++ G + D C++L+ GK A +L ++ G PDV+ N ++ R
Sbjct: 141 ESMVYRGDIPDIIPCTSLIRGFCRVGKTRKATRVLEILEDSGAVPDVITYNVLISGYCRA 200
Query: 352 -----ALKHSDRES------------RSIIAN----RALELFEEMISILVIPDTFTYFFL 236
ALK DR S RS+ + +A+++ + + PD TY L
Sbjct: 201 GEMDNALKLLDRMSVAPDVVTYNTILRSLCDSGKLKQAMKVLDRQMERECYPDVITYTIL 260
Query: 235 IKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGC 56
I+ C V Q + LL +M +GC+ N LI + +E R+ EA + M ++GC
Sbjct: 261 IEATCKESGVGQAMKLLDEMRSKGCKPDVVTYNVLINGICKEGRLDEAIDFLNNMVSLGC 320
Query: 55 KPNVYSFNAILKALCQTG 2
KPNV + N IL+++C TG
Sbjct: 321 KPNVITHNIILRSMCSTG 338
Score = 78.2 bits (191), Expect = 1e-13
Identities = 49/165 (29%), Positives = 78/165 (47%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESR 323
D T + L+ A + G A+ LL+ M G +PDVV N ++ + + E R
Sbjct: 253 DVITYTILIEATCKESGVGQAMKLLDEMRSKGCKPDVVTYNVLINGICK--------EGR 304
Query: 322 SIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGM 143
+ A++ M+S+ P+ T+ +++ CS G+ LL DML +GC
Sbjct: 305 ---LDEAIDFLNNMVSLGCKPNVITHNIILRSMCSTGRWMDAEKLLTDMLGKGCSPSVVT 361
Query: 142 MNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQ 8
N LI L R+ + A + D+M GC PN S+N +L A C+
Sbjct: 362 FNILINFLCRKGLLGRAIDMLDKMPKHGCTPNSLSYNPLLHAFCK 406
Score = 71.2 bits (173), Expect = 3e-11
Identities = 57/195 (29%), Positives = 88/195 (45%), Gaps = 24/195 (12%)
Frame = -2
Query: 514 GWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLS-----RCA 350
G + D T + L+S G+ AL LL+ M PDVV N +LRSL + A
Sbjct: 182 GAVPDVITYNVLISGYCRAGEMDNALKLLDRM---SVAPDVVTYNTILRSLCDSGKLKQA 238
Query: 349 LKHSDRESR----------SII---------ANRALELFEEMISILVIPDTFTYFFLIKC 227
+K DR+ +I+ +A++L +EM S PD TY LI
Sbjct: 239 MKVLDRQMERECYPDVITYTILIEATCKESGVGQAMKLLDEMRSKGCKPDVVTYNVLING 298
Query: 226 CCSAGKVDQGLSLLADMLKRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPN 47
C G++D+ + L +M+ GC+ N ++ + R +A L M GC P+
Sbjct: 299 ICKEGRLDEAIDFLNNMVSLGCKPNVITHNIILRSMCSTGRWMDAEKLLTDMLGKGCSPS 358
Query: 46 VYSFNAILKALCQTG 2
V +FN ++ LC+ G
Sbjct: 359 VVTFNILINFLCRKG 373
Score = 69.7 bits (169), Expect = 1e-10
Identities = 47/164 (28%), Positives = 76/164 (46%)
Frame = -2
Query: 493 TCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESRSII 314
T + L++ + KG G A+ +L+ MPK G P+ + N +L + C K DR
Sbjct: 361 TFNILINFLCRKGLLGRAIDMLDKMPKHGCTPNSLSYNPLLHAF--CKEKKMDR------ 412
Query: 313 ANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNA 134
ALE M+S PD TY L+ C G VD L +L + +GC N
Sbjct: 413 ---ALEYLGIMVSRGCYPDIVTYNTLLTALCKDGNVDVALEILNQLSSKGCSPVLITYNT 469
Query: 133 LIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
+I L + + A L D M G +P++ ++++++ L + G
Sbjct: 470 VIDGLAKSGKTEHAIKLLDEMQKKGLQPDIITYSSLVSGLSREG 513
Score = 67.0 bits (162), Expect = 8e-10
Identities = 44/192 (22%), Positives = 87/192 (45%), Gaps = 25/192 (13%)
Frame = -2
Query: 502 DSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRES- 326
D T + L++ + +G+ A+ LN M LG +P+V+ N +LRS+ + D E
Sbjct: 288 DVVTYNVLINGICKEGRLDEAIDFLNNMVSLGCKPNVITHNIILRSMCSTG-RWMDAEKL 346
Query: 325 ------------------------RSIIANRALELFEEMISILVIPDTFTYFFLIKCCCS 218
R + RA+++ ++M P++ +Y L+ C
Sbjct: 347 LTDMLGKGCSPSVVTFNILINFLCRKGLLGRAIDMLDKMPKHGCTPNSLSYNPLLHAFCK 406
Query: 217 AGKVDQGLSLLADMLKRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYS 38
K+D+ L L M+ RGC N L+ L ++ + A + +++++ GC P + +
Sbjct: 407 EKKMDRALEYLGIMVSRGCYPDIVTYNTLLTALCKDGNVDVALEILNQLSSKGCSPVLIT 466
Query: 37 FNAILKALCQTG 2
+N ++ L ++G
Sbjct: 467 YNTVIDGLAKSG 478
>XP_009409780.1 PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Musa acuminata subsp. malaccensis]
Length = 1099
Score = 89.7 bits (221), Expect = 1e-17
Identities = 51/141 (36%), Positives = 77/141 (54%)
Frame = -2
Query: 424 MMPKLGFRPDVVICNRVLRSLSRCALKHSDRESRSIIANRALELFEEMISILVIPDTFTY 245
+M G PD+V CN L L+ ES + RA E+F E++++ + PDT TY
Sbjct: 449 IMKSKGVVPDIVACNACLYGLA---------ESGRL--ERAKEVFHELMAVGISPDTITY 497
Query: 244 FFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNALIYELIRENRIAEACILFDRMAA 65
+IKCC AG+VD+ L + ++M +RGC +N+LI L + R+ EA +F M A
Sbjct: 498 NMMIKCCNKAGRVDEALKMFSEMRQRGCYPDEITVNSLIDALYKAGRVDEAWNVFHGMKA 557
Query: 64 MGCKPNVYSFNAILKALCQTG 2
M P V ++N +L L + G
Sbjct: 558 MNLVPTVVTYNTLLAGLGKEG 578
Score = 59.7 bits (143), Expect = 3e-07
Identities = 39/157 (24%), Positives = 70/157 (44%)
Frame = -2
Query: 493 TCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRCALKHSDRESRSII 314
T L+ + G+ A L N M + G +P+ I N ++ + ++
Sbjct: 881 TYGPLIDGLLKSGRVTQAESLFNEMVEYGCKPNCAIYNILINGFGKAG---------EVV 931
Query: 313 ANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLKRGCQAKRGMMNA 134
+AL+ FE M+ + PD +Y LI AG+ + L ++ G + N
Sbjct: 932 --KALQTFERMVKEGIRPDVKSYTILINTLYMAGRAEDALFYFEELRVTGLEPDLITYNL 989
Query: 133 LIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAIL 23
+I L + R+ EA LFD M G P++Y++N+++
Sbjct: 990 MINGLGKTQRLQEAVALFDEMQDRGIFPDLYTYNSLI 1026
Score = 56.2 bits (134), Expect = 5e-06
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 1/176 (0%)
Frame = -2
Query: 526 MLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNM-MPKLGFRPDVVICNRVLRSLSRCA 350
M ++G D T +A + A Y K LF L M G P+ + N ++ L +
Sbjct: 800 MKNVGCSPDVNTYNAFLDA-YGKSSRIEGLFKLQEEMLSRGCTPNNITYNTIISGLVK-- 856
Query: 349 LKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADMLK 170
S + ++A++++ +++S P TY LI +G+V Q SL +M++
Sbjct: 857 ---------SKMLDQAIDMYYDLMSEDFSPTPCTYGPLIDGLLKSGRVTQAESLFNEMVE 907
Query: 169 RGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSFNAILKALCQTG 2
GC+ + N LI + + +A F+RM G +P+V S+ ++ L G
Sbjct: 908 YGCKPNCAIYNILINGFGKAGEVVKALQTFERMVKEGIRPDVKSYTILINTLYMAG 963
Score = 55.5 bits (132), Expect = 9e-06
Identities = 42/166 (25%), Positives = 70/166 (42%)
Frame = -2
Query: 532 ESMLHIGWLLDSRTCSALVSAMYDKGKAGTALFLLNMMPKLGFRPDVVICNRVLRSLSRC 353
E M+ G D ++ + L++ +Y G+A ALF + G PD++ N ++ L +
Sbjct: 938 ERMVKEGIRPDVKSYTILINTLYMAGRAEDALFYFEELRVTGLEPDLITYNLMINGLGKT 997
Query: 352 ALKHSDRESRSIIANRALELFEEMISILVIPDTFTYFFLIKCCCSAGKVDQGLSLLADML 173
A+ LF+EM + PD +TY LI AG V + + ++
Sbjct: 998 QR-----------LQEAVALFDEMQDRGIFPDLYTYNSLILNFGKAGMVAEAGKMYEELQ 1046
Query: 172 KRGCQAKRGMMNALIYELIRENRIAEACILFDRMAAMGCKPNVYSF 35
+G + NALI A ++ +M GC PN +F
Sbjct: 1047 IKGFRPNVFTYNALIRGYSTSGDADHAYAVYKKMLVGGCNPNSGTF 1092