BLASTX nr result

ID: Alisma22_contig00042576 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00042576
         (247 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_008783406.1 PREDICTED: LOW QUALITY PROTEIN: DDB1- and CUL4-as...    56   2e-07
XP_008795599.1 PREDICTED: DDB1- and CUL4-associated factor homol...    55   5e-07
XP_019703984.1 PREDICTED: DDB1- and CUL4-associated factor homol...    53   3e-06
XP_010911880.1 PREDICTED: DDB1- and CUL4-associated factor homol...    53   3e-06

>XP_008783406.1 PREDICTED: LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor
            homolog 1-like [Phoenix dactylifera]
          Length = 1964

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
 Frame = +1

Query: 1    SNLTAIAYPLQKEASLIPLPSLNI-SQPLHKNSILETAYACLYWPSWCIPFGFLTNMIIM 177
            S LTA A  LQKEA L PLPSL + + PLH+ S+ ET+   L WPS   P GFL+  + M
Sbjct: 1206 SGLTATAALLQKEADLTPLPSLGVPTPPLHQTSVQETSNVQLQWPSGRAPCGFLSETVKM 1265


>XP_008795599.1 PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Phoenix
            dactylifera]
          Length = 1925

 Score = 55.5 bits (132), Expect = 5e-07
 Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
 Frame = +1

Query: 1    SNLTAIAYPLQKEASLIPLPSLNI-SQPLHKNSILETAYACLYWPSWCIPFGFLTNMIIM 177
            S LTA A  LQKEA L PLPS  + + PLH+ S+ ET+ A L WPS   P GFL+  + M
Sbjct: 1164 SGLTATAALLQKEADLTPLPSSGVPTPPLHQTSVQETSNAQLQWPSCRAPCGFLSEKVKM 1223


>XP_019703984.1 PREDICTED: DDB1- and CUL4-associated factor homolog 1-like isoform X2
            [Elaeis guineensis]
          Length = 1759

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
 Frame = +1

Query: 1    SNLTAIAYPLQKEASLIPLPSLNI-SQPLHKNSILETAYACLYWPSWCIPFGFLTNMIIM 177
            S LTA A  LQKEA L PLPSL + + PLH+ S+ ET+   L WPS     GFL+ ++ M
Sbjct: 1210 SGLTATAALLQKEADLTPLPSLGVLTPPLHQTSVQETSNVQLQWPSGRALCGFLSEIVKM 1269


>XP_010911880.1 PREDICTED: DDB1- and CUL4-associated factor homolog 1-like isoform X1
            [Elaeis guineensis]
          Length = 1972

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
 Frame = +1

Query: 1    SNLTAIAYPLQKEASLIPLPSLNI-SQPLHKNSILETAYACLYWPSWCIPFGFLTNMIIM 177
            S LTA A  LQKEA L PLPSL + + PLH+ S+ ET+   L WPS     GFL+ ++ M
Sbjct: 1210 SGLTATAALLQKEADLTPLPSLGVLTPPLHQTSVQETSNVQLQWPSGRALCGFLSEIVKM 1269


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