BLASTX nr result
ID: Alisma22_contig00042163
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00042163
(219 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAV82775.1 hypothetical protein CFOL_v3_26226, partial [Cephalot... 46 1e-07
JAT65994.1 Putative ribonuclease H protein At1g65750, partial [A... 49 6e-07
GAV92943.1 hypothetical protein CFOL_v3_36321, partial [Cephalot... 45 7e-07
GAV86407.1 LOW QUALITY PROTEIN: zf-RVT domain-containing protein... 42 1e-06
JAT50758.1 Retrovirus-related Pol polyprotein LINE-1, partial [A... 47 1e-06
GAV59835.1 hypothetical protein CFOL_v3_03366, partial [Cephalot... 47 1e-06
GAV92425.1 zf-RVT domain-containing protein, partial [Cephalotus... 44 2e-06
GAV92490.1 LOW QUALITY PROTEIN: zf-RVT domain-containing protein... 45 2e-06
JAT63902.1 LINE-1 reverse transcriptase [Anthurium amnicola] 45 3e-06
GAV92363.1 zf-RVT domain-containing protein, partial [Cephalotus... 44 3e-06
GAV80304.1 hypothetical protein CFOL_v3_23765 [Cephalotus follic... 40 4e-06
JAT53351.1 Retrovirus-related Pol polyprotein LINE-1 [Anthurium ... 45 5e-06
GAV92686.1 zf-RVT domain-containing protein, partial [Cephalotus... 47 5e-06
GAV67084.1 LOW QUALITY PROTEIN: zf-RVT domain-containing protein... 40 5e-06
GAV92977.1 hypothetical protein CFOL_v3_36355, partial [Cephalot... 44 7e-06
GAV93079.1 hypothetical protein CFOL_v3_36457, partial [Cephalot... 45 9e-06
GAV73102.1 zf-RVT domain-containing protein, partial [Cephalotus... 43 9e-06
GAV90963.1 hypothetical protein CFOL_v3_34363 [Cephalotus follic... 42 9e-06
>GAV82775.1 hypothetical protein CFOL_v3_26226, partial [Cephalotus
follicularis]
Length = 151
Score = 46.2 bits (108), Expect(2) = 1e-07
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +3
Query: 3 LTKSMCAPIIDKVKLKLDSWKCRLLSMVGRVELVISTLSSYHILVGCLF 149
LTK CAP+I+K++ ++++W + LS GR++L+ STL S + F
Sbjct: 51 LTKQHCAPLIEKIQARVNNWATKTLSYAGRLQLIKSTLESLQVFWSSTF 99
Score = 37.0 bits (84), Expect(2) = 1e-07
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 121 LTIFWSAAFSLPKSIIAELEKCF*RFIWG 207
L +FWS+ F LP ++ E EK RF+WG
Sbjct: 91 LQVFWSSTFLLPSTVTKECEKLMRRFLWG 119
>JAT65994.1 Putative ribonuclease H protein At1g65750, partial [Anthurium
amnicola]
Length = 507
Score = 48.9 bits (115), Expect(2) = 6e-07
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = +3
Query: 3 LTKSMCAPIIDKVKLKLDSWKCRLLSMVGRVELVISTLSSYHI 131
L S C +++KV+ K+ SWK RLLS GR+EL+ S LSSY I
Sbjct: 217 LKASHCQSLVEKVRKKISSWKTRLLSKAGRLELIRSILSSYSI 259
Score = 31.6 bits (70), Expect(2) = 6e-07
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 124 TIFWSAAFSLPKSIIAELEKCF*RFIW-GDAED 219
+I+W+ AF+LP S I +E +F W G+ ED
Sbjct: 258 SIYWTTAFALPCSTIHAIESLLSKFFWSGNVED 290
>GAV92943.1 hypothetical protein CFOL_v3_36321, partial [Cephalotus
follicularis]
Length = 293
Score = 44.7 bits (104), Expect(2) = 7e-07
Identities = 17/40 (42%), Positives = 31/40 (77%)
Frame = +3
Query: 3 LTKSMCAPIIDKVKLKLDSWKCRLLSMVGRVELVISTLSS 122
L+K+ C+P+I+++ +++SW C+ LS GR++LV +TL S
Sbjct: 72 LSKADCSPLIERIVSRVNSWVCKALSFAGRIQLVTATLLS 111
Score = 35.8 bits (81), Expect(2) = 7e-07
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 130 FWSAAFSLPKSIIAELEKCF*RFIWG 207
+W + F LP SII E E+ F RF+WG
Sbjct: 115 YWCSTFLLPMSIIKECERVFRRFLWG 140
>GAV86407.1 LOW QUALITY PROTEIN: zf-RVT domain-containing protein, partial
[Cephalotus follicularis]
Length = 335
Score = 42.0 bits (97), Expect(2) = 1e-06
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +3
Query: 3 LTKSMCAPIIDKVKLKLDSWKCRLLSMVGRVELVISTLSSYHI 131
LTK CAP+++K + +SW + LS GR++L+ STL+S +
Sbjct: 26 LTKRDCAPLMEKFLARANSWTSKYLSYAGRLQLIKSTLASMQV 68
Score = 37.7 bits (86), Expect(2) = 1e-06
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 121 LTIFWSAAFSLPKSIIAELEKCF*RFIWG 207
+ +FW FSLP ++I E EK RF+WG
Sbjct: 66 MQVFWCTTFSLPAAVIKECEKVMRRFLWG 94
>JAT50758.1 Retrovirus-related Pol polyprotein LINE-1, partial [Anthurium
amnicola]
Length = 1070
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +3
Query: 3 LTKSMCAPIIDKVKLKLDSWKCRLLSMVGRVELVISTLSSYHI 131
L + C ++DK++ ++ SWK RLLS GR+EL+ S LSSY I
Sbjct: 764 LKANHCQFLVDKIRKRISSWKTRLLSKAGRLELIRSILSSYSI 806
Score = 32.7 bits (73), Expect(2) = 1e-06
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 124 TIFWSAAFSLPKSIIAELEKCF*RFIWGDAE 216
+I+WS AF+LP SII +E +F W E
Sbjct: 805 SIYWSTAFALPCSIIHAIEALLSKFFWSGNE 835
>GAV59835.1 hypothetical protein CFOL_v3_03366, partial [Cephalotus
follicularis]
Length = 120
Score = 47.4 bits (111), Expect(2) = 1e-06
Identities = 19/43 (44%), Positives = 32/43 (74%)
Frame = +3
Query: 3 LTKSMCAPIIDKVKLKLDSWKCRLLSMVGRVELVISTLSSYHI 131
LTK CAP+I+K++ +++SW + LS GR++L+ STL+S +
Sbjct: 12 LTKQHCAPLIEKIQARVNSWATKTLSYTGRLQLIKSTLASLQV 54
Score = 32.0 bits (71), Expect(2) = 1e-06
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 121 LTIFWSAAFSLPKSIIAELEKCF*RFIWG 207
L +FWS+ L +I E EK RF+WG
Sbjct: 52 LQVFWSSTLLLSSAITKECEKLMRRFLWG 80
>GAV92425.1 zf-RVT domain-containing protein, partial [Cephalotus follicularis]
Length = 520
Score = 44.3 bits (103), Expect(2) = 2e-06
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +3
Query: 3 LTKSMCAPIIDKVKLKLDSWKCRLLSMVGRVELVISTLSSYHILVGCLF 149
LTK CAP+++K+ + +SW + LS GR++L+ STL+S + F
Sbjct: 82 LTKQDCAPLLEKIMARANSWVSKSLSYAGRLQLIQSTLASMQVFWASTF 130
Score = 34.7 bits (78), Expect(2) = 2e-06
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 121 LTIFWSAAFSLPKSIIAELEKCF*RFIWG 207
+ +FW++ F LP +II + E+ RF+WG
Sbjct: 122 MQVFWASTFLLPATIIKDCERTLRRFLWG 150
>GAV92490.1 LOW QUALITY PROTEIN: zf-RVT domain-containing protein, partial
[Cephalotus follicularis]
Length = 329
Score = 45.1 bits (105), Expect(2) = 2e-06
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +3
Query: 3 LTKSMCAPIIDKVKLKLDSWKCRLLSMVGRVELVISTLSSYHI 131
LTK CAP++ K+ + +SW R LS GR++L+ STL+S H+
Sbjct: 29 LTKQDCAPLLAKILGRANSWVSRSLSYAGRLQLIRSTLASMHV 71
Score = 33.9 bits (76), Expect(2) = 2e-06
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 127 IFWSAAFSLPKSIIAELEKCF*RFIWG 207
+FW + F LP +I E E+ RF+WG
Sbjct: 71 VFWCSTFLLPAEVIKECERTLRRFLWG 97
>JAT63902.1 LINE-1 reverse transcriptase [Anthurium amnicola]
Length = 825
Score = 45.1 bits (105), Expect(2) = 3e-06
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3
Query: 3 LTKSMCAPIIDKVKLKLDSWKCRLLSMVGRVELVISTLSSYHILVGCLF 149
L + C ++DKV+ ++ WK RLLS GR+EL+ S +SSY I F
Sbjct: 536 LKAAHCQNLVDKVRKQISCWKTRLLSKAGRLELIRSIISSYSIFWSTAF 584
Score = 33.1 bits (74), Expect(2) = 3e-06
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 124 TIFWSAAFSLPKSIIAELEKCF*RFIWGDAE 216
+IFWS AF+LP S I +E RF W +
Sbjct: 577 SIFWSTAFALPCSTILAIEALLSRFFWSGGD 607
>GAV92363.1 zf-RVT domain-containing protein, partial [Cephalotus follicularis]
Length = 324
Score = 43.9 bits (102), Expect(2) = 3e-06
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +3
Query: 3 LTKSMCAPIIDKVKLKLDSWKCRLLSMVGRVELVISTLSSYHILVGCLF 149
LTK CAP+++K+ + +SW + LS GR++L+ STL+S + F
Sbjct: 20 LTKQDCAPLMEKIMARANSWVSKSLSYAGRLQLIQSTLASMQVFWASTF 68
Score = 34.3 bits (77), Expect(2) = 3e-06
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 121 LTIFWSAAFSLPKSIIAELEKCF*RFIWG 207
+ +FW++ F LP +II + E+ RF+WG
Sbjct: 60 MQVFWASTFLLPVAIIKDCERTLRRFLWG 88
>GAV80304.1 hypothetical protein CFOL_v3_23765 [Cephalotus follicularis]
Length = 270
Score = 40.4 bits (93), Expect(2) = 4e-06
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +3
Query: 3 LTKSMCAPIIDKVKLKLDSWKCRLLSMVGRVELVISTLSSYHI 131
LTK C P+++K+ ++++W + LS GR++L+ STL S I
Sbjct: 23 LTKQDCIPLMEKIFARVNNWMSKYLSYAGRLQLIKSTLVSMQI 65
Score = 37.4 bits (85), Expect(2) = 4e-06
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 121 LTIFWSAAFSLPKSIIAELEKCF*RFIWG 207
+ IFW + FSLP +I E EK RF+WG
Sbjct: 63 MQIFWCSTFSLPAIVIKECEKVMRRFLWG 91
>JAT53351.1 Retrovirus-related Pol polyprotein LINE-1 [Anthurium amnicola]
Length = 1225
Score = 45.4 bits (106), Expect(2) = 5e-06
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +3
Query: 18 CAPIIDKVKLKLDSWKCRLLSMVGRVELVISTLSSYHI 131
C ++DKV+ K+ SWK R LS GR+EL+ S LSSY +
Sbjct: 777 CQGLVDKVRRKISSWKNRFLSKAGRLELIKSILSSYSL 814
Score = 32.0 bits (71), Expect(2) = 5e-06
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 124 TIFWSAAFSLPKSIIAELEKCF*RFIWGDAE 216
+++W++AF+LP SII +E RF W +
Sbjct: 813 SLYWTSAFALPGSIINAIEGLLSRFFWSGGD 843
>GAV92686.1 zf-RVT domain-containing protein, partial [Cephalotus follicularis]
Length = 450
Score = 46.6 bits (109), Expect(2) = 5e-06
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +3
Query: 3 LTKSMCAPIIDKVKLKLDSWKCRLLSMVGRVELVISTLSSYHI 131
LTK CAP+++++ + +SW R LS GR++L+ STL+S HI
Sbjct: 12 LTKHDCAPLLERILARANSWVSRSLSYAGRLQLIRSTLASMHI 54
Score = 30.8 bits (68), Expect(2) = 5e-06
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 127 IFWSAAFSLPKSIIAELEKCF*RFIWG 207
I+W + + LP +I + E+ RF+WG
Sbjct: 54 IYWCSTYLLPADVIKDCERTLRRFLWG 80
>GAV67084.1 LOW QUALITY PROTEIN: zf-RVT domain-containing protein, partial
[Cephalotus follicularis]
Length = 322
Score = 40.0 bits (92), Expect(2) = 5e-06
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +3
Query: 3 LTKSMCAPIIDKVKLKLDSWKCRLLSMVGRVELVISTLSSYHI 131
+TK C P+IDK+ + +SW LS G+++L+ STL+S I
Sbjct: 20 ITKQDCYPLIDKMMARSNSWVSNSLSYAGQLQLIKSTLASMQI 62
Score = 37.4 bits (85), Expect(2) = 5e-06
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 121 LTIFWSAAFSLPKSIIAELEKCF*RFIWG 207
+ IFWS++F LP S++ E E+ RF+WG
Sbjct: 60 MQIFWSSSFLLPASVMIECERILHRFLWG 88
>GAV92977.1 hypothetical protein CFOL_v3_36355, partial [Cephalotus
follicularis]
Length = 142
Score = 44.3 bits (103), Expect(2) = 7e-06
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +3
Query: 3 LTKSMCAPIIDKVKLKLDSWKCRLLSMVGRVELVISTLSSYHI 131
LTK C P++ K+ + +SW R LS GR++L+ STL+S H+
Sbjct: 23 LTKQDCEPLLTKILARANSWISRSLSYAGRLQLIRSTLASMHV 65
Score = 32.7 bits (73), Expect(2) = 7e-06
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 127 IFWSAAFSLPKSIIAELEKCF*RFIWG 207
++W + F LP +I E E+ RF+WG
Sbjct: 65 VYWCSTFILPAEVIRECERTLRRFLWG 91
>GAV93079.1 hypothetical protein CFOL_v3_36457, partial [Cephalotus
follicularis]
Length = 368
Score = 45.1 bits (105), Expect(2) = 9e-06
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = +3
Query: 3 LTKSMCAPIIDKVKLKLDSWKCRLLSMVGRVELVISTLSSYHI 131
LTK C P+I+K+ +++SW ++LS GR++L+ STL+S I
Sbjct: 82 LTKRDCIPLIEKILTRVNSWTTKILSYAGRLQLIKSTLASMQI 124
Score = 31.6 bits (70), Expect(2) = 9e-06
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 121 LTIFWSAAFSLPKSIIAELEKCF*RFIWGDA 213
+ IFW + F LP +I E E+ +F+W +
Sbjct: 122 MQIFWCSTFLLPAEVIKECERILRKFLWASS 152
>GAV73102.1 zf-RVT domain-containing protein, partial [Cephalotus follicularis]
Length = 324
Score = 43.1 bits (100), Expect(2) = 9e-06
Identities = 18/43 (41%), Positives = 30/43 (69%)
Frame = +3
Query: 3 LTKSMCAPIIDKVKLKLDSWKCRLLSMVGRVELVISTLSSYHI 131
LTK C P+I+K+ +++SW + LS GR++L+ STL+S +
Sbjct: 26 LTKHDCTPLIEKILARVNSWVTKTLSYAGRLQLIKSTLASMKV 68
Score = 33.5 bits (75), Expect(2) = 9e-06
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 121 LTIFWSAAFSLPKSIIAELEKCF*RFIWGDA 213
+ +FW + F LP ++I + E+ RF+WG +
Sbjct: 66 MKVFWCSTFLLPVAVIKDCERILQRFLWGSS 96
>GAV90963.1 hypothetical protein CFOL_v3_34363 [Cephalotus follicularis]
Length = 201
Score = 41.6 bits (96), Expect(2) = 9e-06
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +3
Query: 3 LTKSMCAPIIDKVKLKLDSWKCRLLSMVGRVELVISTLSSYHI 131
L+K CAP+ +K+ + +SW + LS GR++L+ STLSS +
Sbjct: 79 LSKQDCAPLTEKILARANSWISKSLSYAGRLQLIKSTLSSMQV 121
Score = 35.0 bits (79), Expect(2) = 9e-06
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 121 LTIFWSAAFSLPKSIIAELEKCF*RFIWG 207
+ +FW + F LP S+I E E+ RF+WG
Sbjct: 119 MQVFWCSTFMLPVSMIKECERTLRRFLWG 147