BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00042017
         (378 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAC26250.1 contains similarity to reverse transcriptase (Pfam: r...   184   8e-52
BAA22288.1 polyprotein [Oryza australiensis]                          183   2e-51
ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass...   180   4e-50
AAP44605.1 putative polyprotein [Oryza sativa Japonica Group]         180   4e-50
AAR06328.1 putative polyprotein [Oryza sativa Japonica Group]         179   6e-50
ABF97393.1 retrotransposon protein, putative, Ty1-copia subclass...   179   6e-50
AAX94813.1 retrotransposon protein, putative, Ty1-copia sub-clas...   179   9e-50
CAD39797.2 OSJNBa0071G03.10 [Oryza sativa Japonica Group]             178   1e-49
JAV01053.1 Retrovirus-related Pol polyprotein from transposon TN...   162   1e-49
ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]    178   2e-49
AAV85747.1 Integrase core domain, putative [Oryza sativa Japonic...   177   4e-49
KIO93942.1 hypothetical protein QP38_2410 [Lactobacillus brevis]      165   4e-48
WP_042516805.1 hypothetical protein [Lactobacillus brevis]            165   4e-48
ABA98367.2 retrotransposon protein, putative, Ty1-copia subclass...   174   5e-48
CAE04999.2 OSJNBb0093G06.7 [Oryza sativa Japonica Group]              172   2e-47
AAS01945.1 putative polyprotein [Oryza sativa Japonica Group]         172   3e-47
ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass...   172   3e-47
KRY04744.1 Retrovirus-related Pol polyprotein from transposon TN...   155   4e-46
ABA99022.2 retrotransposon protein, putative, Ty1-copia subclass...   167   9e-46
AAX96621.1 retrotransposon protein, putative, Ty1-copia sub-clas...   164   3e-45

>AAC26250.1 contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] CAB80804.1 putative
           retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  184 bits (468), Expect = 8e-52
 Identities = 82/124 (66%), Positives = 99/124 (79%)
 Frame = +2

Query: 5   IFYGSAPMSYGLYLIDLETSVYNVNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHKDGY 184
           +FYGSAP+  GL++++    +YN+ TK+ K N+ N T+LWHCRLGHINEK I +LH DG 
Sbjct: 45  MFYGSAPLDNGLHVLNQSMPIYNIRTKKFKSNDLNPTFLWHCRLGHINEKHIQKLHSDGL 104

Query: 185 LDSLDYESIETCESCLFGKMAKTSFTSNNERASDLLGLIHTDVCGPFRSNARGGYQYFIT 364
           L+S DYES ETCESCL GKM K  FT ++ERASDLLGLIHTDVCGP  ++ARG YQYFIT
Sbjct: 105 LNSFDYESYETCESCLLGKMTKAPFTGHSERASDLLGLIHTDVCGPMSTSARGNYQYFIT 164

Query: 365 FTDD 376
           FTDD
Sbjct: 165 FTDD 168


>BAA22288.1 polyprotein [Oryza australiensis]
          Length = 1317

 Score =  183 bits (465), Expect = 2e-51
 Identities = 83/125 (66%), Positives = 101/125 (80%), Gaps = 1/125 (0%)
 Frame = +2

Query: 5   IFYGSAPMSYGLYLIDLETS-VYNVNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHKDG 181
           +FY  AP+  GLY+++LE S +YN+NT+RQ  N+ N T++WHCRLGHIN+KR+ +LHKDG
Sbjct: 400 MFYFHAPLVNGLYVLNLEASPIYNINTERQLSNDINPTFIWHCRLGHINKKRMEKLHKDG 459

Query: 182 YLDSLDYESIETCESCLFGKMAKTSFTSNNERASDLLGLIHTDVCGPFRSNARGGYQYFI 361
            L S D+ES ETCESCL GKM K  FT ++ERASDLL L+HTDVCGP  S ARGGYQYFI
Sbjct: 460 LLHSFDFESFETCESCLLGKMTKAPFTGHSERASDLLALVHTDVCGPMSSTARGGYQYFI 519

Query: 362 TFTDD 376
           TFTDD
Sbjct: 520 TFTDD 524


>ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1248

 Score =  180 bits (456), Expect = 4e-50
 Identities = 82/125 (65%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
 Frame = +2

Query: 5   IFYGSAPMSYGLYLIDLE-TSVYNVNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHKDG 181
           IFY  APM  GLY+++L+  SVYN+N KRQ+ NN N T++WHC LGHINEKRI +LH+DG
Sbjct: 365 IFYFHAPMMNGLYIVNLDGCSVYNINAKRQRPNNLNPTFIWHCCLGHINEKRIEKLHRDG 424

Query: 182 YLDSLDYESIETCESCLFGKMAKTSFTSNNERASDLLGLIHTDVCGPFRSNARGGYQYFI 361
            L S D+ES +TCESCL GKM K  FT  +ERAS+LLGL+HTDVCGP  S ARGG+ YFI
Sbjct: 425 LLHSFDFESFKTCESCLLGKMTKAPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFI 484

Query: 362 TFTDD 376
           TFTD+
Sbjct: 485 TFTDE 489


>AAP44605.1 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  180 bits (456), Expect = 4e-50
 Identities = 82/125 (65%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
 Frame = +2

Query: 5   IFYGSAPMSYGLYLIDLE-TSVYNVNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHKDG 181
           IFY  APM  GLY+++L+  SVYN+N KRQ+ NN N T++WHC LGHINEKRI +LH+DG
Sbjct: 278 IFYFHAPMMNGLYIVNLDGCSVYNINAKRQRPNNLNPTFIWHCCLGHINEKRIEKLHRDG 337

Query: 182 YLDSLDYESIETCESCLFGKMAKTSFTSNNERASDLLGLIHTDVCGPFRSNARGGYQYFI 361
            L S D+ES +TCESCL GKM K  FT  +ERAS+LLGL+HTDVCGP  S ARGG+ YFI
Sbjct: 338 LLHSFDFESFKTCESCLLGKMTKAPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFI 397

Query: 362 TFTDD 376
           TFTD+
Sbjct: 398 TFTDE 402


>AAR06328.1 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score =  179 bits (455), Expect = 6e-50
 Identities = 81/125 (64%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
 Frame = +2

Query: 5   IFYGSAPMSYGLYLIDLE-TSVYNVNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHKDG 181
           +FY  APM  GLY+++L+  SVYN+N KRQ  N+ N T++WHCRLGHINEKR+ +LH+DG
Sbjct: 492 LFYFHAPMMNGLYIVNLDGCSVYNINAKRQHPNDLNPTFIWHCRLGHINEKRMEKLHRDG 551

Query: 182 YLDSLDYESIETCESCLFGKMAKTSFTSNNERASDLLGLIHTDVCGPFRSNARGGYQYFI 361
            L S D+ES ETCESCL GKM K  FT  ++RAS+LLGL+HTDVCGP  S ARGG+ YFI
Sbjct: 552 LLHSFDFESFETCESCLLGKMTKAPFTGQSKRASELLGLVHTDVCGPMSSTARGGFGYFI 611

Query: 362 TFTDD 376
           TFTDD
Sbjct: 612 TFTDD 616


>ABF97393.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1073

 Score =  179 bits (455), Expect = 6e-50
 Identities = 81/125 (64%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
 Frame = +2

Query: 5   IFYGSAPMSYGLYLIDLE-TSVYNVNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHKDG 181
           +FY  APM  GLY+++L+  SVYN+N KRQ  N+ N T++WHCRLGHINEKR+ +LH+DG
Sbjct: 492 LFYFHAPMMNGLYIVNLDGCSVYNINAKRQHPNDLNPTFIWHCRLGHINEKRMEKLHRDG 551

Query: 182 YLDSLDYESIETCESCLFGKMAKTSFTSNNERASDLLGLIHTDVCGPFRSNARGGYQYFI 361
            L S D+ES ETCESCL GKM K  FT  ++RAS+LLGL+HTDVCGP  S ARGG+ YFI
Sbjct: 552 LLHSFDFESFETCESCLLGKMTKAPFTGQSKRASELLGLVHTDVCGPMSSTARGGFGYFI 611

Query: 362 TFTDD 376
           TFTDD
Sbjct: 612 TFTDD 616


>AAX94813.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] ABA93176.1 retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 938

 Score =  179 bits (453), Expect = 9e-50
 Identities = 80/125 (64%), Positives = 100/125 (80%), Gaps = 1/125 (0%)
 Frame = +2

Query: 5   IFYGSAPMSYGLYLIDLE-TSVYNVNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHKDG 181
           IFY  APM  GLY+++L+  SVYN+N KRQ+ N+ N T++WHCRLGHINE+R+ +LH+DG
Sbjct: 285 IFYFHAPMMNGLYIVNLDGCSVYNINAKRQRPNDLNPTFIWHCRLGHINERRMEKLHRDG 344

Query: 182 YLDSLDYESIETCESCLFGKMAKTSFTSNNERASDLLGLIHTDVCGPFRSNARGGYQYFI 361
            L S D+ES ETCESCL GKM K  FT  +E+AS+LLGL+HTDVCGP  S ARGG+ YFI
Sbjct: 345 LLHSFDFESFETCESCLLGKMTKAPFTGQSEKASELLGLVHTDVCGPMSSTARGGFGYFI 404

Query: 362 TFTDD 376
           TFT+D
Sbjct: 405 TFTND 409


>CAD39797.2 OSJNBa0071G03.10 [Oryza sativa Japonica Group]
          Length = 948

 Score =  178 bits (452), Expect = 1e-49
 Identities = 81/125 (64%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
 Frame = +2

Query: 5   IFYGSAPMSYGLYLIDLE-TSVYNVNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHKDG 181
           IFY  APM  GLY+++L+  SVYN+N KRQ+ N+ N T++WHCRLGHINEKR+ +LH+DG
Sbjct: 395 IFYFHAPMMNGLYIVNLDGCSVYNINAKRQRPNDLNPTFIWHCRLGHINEKRMEKLHRDG 454

Query: 182 YLDSLDYESIETCESCLFGKMAKTSFTSNNERASDLLGLIHTDVCGPFRSNARGGYQYFI 361
            L S D+ES ETCESCL GKM K  FT  +ERAS+LL L+HTDVCGP  S AR G+ YFI
Sbjct: 455 LLHSFDFESFETCESCLLGKMTKAPFTGQSERASELLALVHTDVCGPMSSTARSGFGYFI 514

Query: 362 TFTDD 376
           TFTDD
Sbjct: 515 TFTDD 519


>JAV01053.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Noccaea caerulescens]
          Length = 109

 Score =  162 bits (410), Expect = 1e-49
 Identities = 74/101 (73%), Positives = 81/101 (80%)
 Frame = +2

Query: 74  VNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHKDGYLDSLDYESIETCESCLFGKMAKT 253
           + TKR K N+SN+T+LWHCRLGHINEKRI +LH DG L S DYES E CESCL GKM K 
Sbjct: 1   IRTKRFKSNDSNQTFLWHCRLGHINEKRIQKLHSDGLLSSFDYESFEKCESCLLGKMTKA 60

Query: 254 SFTSNNERASDLLGLIHTDVCGPFRSNARGGYQYFITFTDD 376
            FT ++ERASDLLGLIHTDVCGP   NARG YQYFITFT D
Sbjct: 61  PFTGHSERASDLLGLIHTDVCGPMSINARGNYQYFITFTHD 101


>ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  178 bits (452), Expect = 2e-49
 Identities = 79/125 (63%), Positives = 100/125 (80%), Gaps = 1/125 (0%)
 Frame = +2

Query: 5   IFYGSAPMSYGLYLIDLETS-VYNVNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHKDG 181
           +FYG AP+  GL++++L+ + ++N+N KR + NN N T++WHCRLGHI+EKR+ +LH DG
Sbjct: 488 MFYGYAPVLNGLFILNLDDAPIFNINAKRLRPNNMNSTFIWHCRLGHISEKRMKKLHDDG 547

Query: 182 YLDSLDYESIETCESCLFGKMAKTSFTSNNERASDLLGLIHTDVCGPFRSNARGGYQYFI 361
            L+S D ES ETCESC+ GKM KT FT  NERASDLL LIHTDVCGP  + ARGG+QYFI
Sbjct: 548 ILNSFDLESFETCESCILGKMTKTPFTGRNERASDLLALIHTDVCGPMSTTARGGFQYFI 607

Query: 362 TFTDD 376
           TFTDD
Sbjct: 608 TFTDD 612


>AAV85747.1 Integrase core domain, putative [Oryza sativa Japonica Group]
           AAX92956.1 retrotransposon protein, putative, Ty1-copia
           sub-class [Oryza sativa Japonica Group] ABA92827.2
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1184

 Score =  177 bits (449), Expect = 4e-49
 Identities = 80/125 (64%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
 Frame = +2

Query: 5   IFYGSAPMSYGLYLIDLET-SVYNVNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHKDG 181
           IFY  APM  GLY+++L   SVYN+N KRQ+ N+ N T++WHCRLGHINEKR+ ++H+DG
Sbjct: 376 IFYFHAPMMSGLYIVNLNGYSVYNINAKRQRPNDLNPTFIWHCRLGHINEKRMEKIHRDG 435

Query: 182 YLDSLDYESIETCESCLFGKMAKTSFTSNNERASDLLGLIHTDVCGPFRSNARGGYQYFI 361
            L S D+ES ETCESCL GKM K  FT  +ERAS+LL L+HTDVCGP  S ARGG+ YF 
Sbjct: 436 LLHSFDFESFETCESCLLGKMTKAPFTGQSERASELLALVHTDVCGPMSSTARGGFGYFF 495

Query: 362 TFTDD 376
           TFTDD
Sbjct: 496 TFTDD 500


>KIO93942.1 hypothetical protein QP38_2410 [Lactobacillus brevis]
          Length = 321

 Score =  165 bits (418), Expect = 4e-48
 Identities = 74/127 (58%), Positives = 97/127 (76%), Gaps = 3/127 (2%)
 Frame = +2

Query: 5   IFYGSAPMSYGLYLIDLE---TSVYNVNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHK 175
           IFYG AP+  GL++++L+   T ++N+ TKR ++NN +  +LWHCRLGHI  KR+ +LH 
Sbjct: 188 IFYGHAPIVRGLFILNLDCDDTHIHNIETKRCRVNNDSAMFLWHCRLGHIGVKRMKKLHS 247

Query: 176 DGYLDSLDYESIETCESCLFGKMAKTSFTSNNERASDLLGLIHTDVCGPFRSNARGGYQY 355
           DG L+SLD+ES++TCE CL GKM KT F+   ERASDLL +IHTDVCGP    ARGG+ Y
Sbjct: 248 DGLLESLDFESLDTCEPCLMGKMTKTPFSGTMERASDLLEIIHTDVCGPMSVEARGGHCY 307

Query: 356 FITFTDD 376
           F+TFTDD
Sbjct: 308 FLTFTDD 314


>WP_042516805.1 hypothetical protein [Lactobacillus brevis]
          Length = 323

 Score =  165 bits (418), Expect = 4e-48
 Identities = 74/127 (58%), Positives = 97/127 (76%), Gaps = 3/127 (2%)
 Frame = +2

Query: 5   IFYGSAPMSYGLYLIDLE---TSVYNVNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHK 175
           IFYG AP+  GL++++L+   T ++N+ TKR ++NN +  +LWHCRLGHI  KR+ +LH 
Sbjct: 190 IFYGHAPIVRGLFILNLDCDDTHIHNIETKRCRVNNDSAMFLWHCRLGHIGVKRMKKLHS 249

Query: 176 DGYLDSLDYESIETCESCLFGKMAKTSFTSNNERASDLLGLIHTDVCGPFRSNARGGYQY 355
           DG L+SLD+ES++TCE CL GKM KT F+   ERASDLL +IHTDVCGP    ARGG+ Y
Sbjct: 250 DGLLESLDFESLDTCEPCLMGKMTKTPFSGTMERASDLLEIIHTDVCGPMSVEARGGHCY 309

Query: 356 FITFTDD 376
           F+TFTDD
Sbjct: 310 FLTFTDD 316


>ABA98367.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1745

 Score =  174 bits (441), Expect = 5e-48
 Identities = 80/125 (64%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
 Frame = +2

Query: 5    IFYGSAPMSYGLYLIDLE-TSVYNVNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHKDG 181
            IFY  APM  GLY+++L+  S+YN+N KRQ  N+ N T++WHCRLGHINEKR+ +LH+DG
Sbjct: 876  IFYFHAPMMSGLYIVNLDGCSIYNINAKRQGPNDLNPTFIWHCRLGHINEKRMEKLHRDG 935

Query: 182  YLDSLDYESIETCESCLFGKMAKTSFTSNNERASDLLGLIHTDVCGPFRSNARGGYQYFI 361
             L SLD+ES ETCESCL GKM K  FT  +ER S+LL L+HTDVCGP  S AR G+ YFI
Sbjct: 936  LLHSLDFESFETCESCLLGKMTKAPFTGQSERTSELLVLVHTDVCGPMSSTARCGFGYFI 995

Query: 362  TFTDD 376
            TFTDD
Sbjct: 996  TFTDD 1000


>CAE04999.2 OSJNBb0093G06.7 [Oryza sativa Japonica Group]
          Length = 923

 Score =  172 bits (436), Expect = 2e-47
 Identities = 77/125 (61%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
 Frame = +2

Query: 5   IFYGSAPMSYGLYLIDLE-TSVYNVNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHKDG 181
           IFY +APM  GLY+++L+  SVYN+N KRQ+ N+ N T++WHCR GHINEK + +L++DG
Sbjct: 359 IFYFNAPMMNGLYIVNLDGCSVYNINAKRQRPNDLNPTFIWHCRFGHINEKCMEKLNRDG 418

Query: 182 YLDSLDYESIETCESCLFGKMAKTSFTSNNERASDLLGLIHTDVCGPFRSNARGGYQYFI 361
            L S  +ES ETCESCL GKM K  FT  +ERAS+LLGL+HTD+CGP  S A+GG+ YFI
Sbjct: 419 LLHSFGFESFETCESCLLGKMTKAPFTGQSERASELLGLVHTDICGPMSSTAKGGFGYFI 478

Query: 362 TFTDD 376
           TFTDD
Sbjct: 479 TFTDD 483


>AAS01945.1 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score =  172 bits (435), Expect = 3e-47
 Identities = 80/125 (64%), Positives = 96/125 (76%), Gaps = 1/125 (0%)
 Frame = +2

Query: 5   IFYGSAPMSYGLYLIDLE-TSVYNVNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHKDG 181
           IFY   PM  GLY+++L+  SVYN+N KRQ  N  N T++WHCRLGHINEKR+ +LH+DG
Sbjct: 379 IFYFHVPMMNGLYIVNLDGCSVYNINAKRQCPNYLNPTFIWHCRLGHINEKRMEKLHRDG 438

Query: 182 YLDSLDYESIETCESCLFGKMAKTSFTSNNERASDLLGLIHTDVCGPFRSNARGGYQYFI 361
            L S D+ES +T ESCL GKM K  FT  +ERAS+LLGL+HTDVCGP  S ARGG+ YFI
Sbjct: 439 LLHSFDFESFKTYESCLLGKMTKGPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFI 498

Query: 362 TFTDD 376
           TFTDD
Sbjct: 499 TFTDD 503


>ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1142

 Score =  172 bits (435), Expect = 3e-47
 Identities = 80/125 (64%), Positives = 96/125 (76%), Gaps = 1/125 (0%)
 Frame = +2

Query: 5   IFYGSAPMSYGLYLIDLE-TSVYNVNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHKDG 181
           IFY   PM  GLY+++L+  SVYN+N KRQ  N  N T++WHCRLGHINEKR+ +LH+DG
Sbjct: 452 IFYFHVPMMNGLYIVNLDGCSVYNINAKRQCPNYLNPTFIWHCRLGHINEKRMEKLHRDG 511

Query: 182 YLDSLDYESIETCESCLFGKMAKTSFTSNNERASDLLGLIHTDVCGPFRSNARGGYQYFI 361
            L S D+ES +T ESCL GKM K  FT  +ERAS+LLGL+HTDVCGP  S ARGG+ YFI
Sbjct: 512 LLHSFDFESFKTYESCLLGKMTKGPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFI 571

Query: 362 TFTDD 376
           TFTDD
Sbjct: 572 TFTDD 576


>KRY04744.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trichinella patagoniensis]
          Length = 173

 Score =  155 bits (393), Expect = 4e-46
 Identities = 72/120 (60%), Positives = 91/120 (75%), Gaps = 3/120 (2%)
 Frame = +2

Query: 5   IFYGSAPMSYGLYLIDLE---TSVYNVNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHK 175
           +FYG APM   L+L++LE   T +++VNTKR K++N + TYLWHCRLGHI  KR+ +LH 
Sbjct: 54  MFYGHAPMVNALFLMNLERDVTHIHSVNTKRCKVDNDSPTYLWHCRLGHIGVKRMKKLHA 113

Query: 176 DGYLDSLDYESIETCESCLFGKMAKTSFTSNNERASDLLGLIHTDVCGPFRSNARGGYQY 355
           DG L+SLDYES +TCE CL GKM KT F+   ERA++LL +IHTDVCGP    ARGGY+Y
Sbjct: 114 DGLLESLDYESFDTCEPCLMGKMTKTPFSGTMERATNLLEIIHTDVCGPMSVEARGGYRY 173


>ABA99022.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score =  167 bits (423), Expect = 9e-46
 Identities = 74/106 (69%), Positives = 86/106 (81%)
 Frame = +2

Query: 59  TSVYNVNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHKDGYLDSLDYESIETCESCLFG 238
           TSVYN+N KRQ  N+ N T++WHCRLGHINEKR+ +LH+DG L S D+ES ETCESCL G
Sbjct: 363 TSVYNINAKRQLPNDLNPTFIWHCRLGHINEKRMKKLHRDGLLHSFDFESFETCESCLLG 422

Query: 239 KMAKTSFTSNNERASDLLGLIHTDVCGPFRSNARGGYQYFITFTDD 376
           KM K  FT  +ERAS+LLGL+HTDVCGP  S ARGG+ YFITFTDD
Sbjct: 423 KMTKAPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFITFTDD 468


>AAX96621.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] ABA92973.1 retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 591

 Score =  164 bits (414), Expect = 3e-45
 Identities = 72/106 (67%), Positives = 85/106 (80%)
 Frame = +2

Query: 59  TSVYNVNTKRQKLNNSNKTYLWHCRLGHINEKRISRLHKDGYLDSLDYESIETCESCLFG 238
           TSVYN+N KRQ+ N+ N T++WHCRLGHINEKR+ +LH+DG L S D+ES ETCESCL G
Sbjct: 306 TSVYNINAKRQRPNDLNPTFIWHCRLGHINEKRMEKLHRDGLLHSFDFESFETCESCLLG 365

Query: 239 KMAKTSFTSNNERASDLLGLIHTDVCGPFRSNARGGYQYFITFTDD 376
           KM K  FT  NERAS+LLGL+HT VCG   S A+GG+ YFITFTDD
Sbjct: 366 KMTKAPFTGQNERASELLGLVHTHVCGSMSSTAKGGFGYFITFTDD 411