BLASTX nr result
ID: Alisma22_contig00040366
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00040366
(295 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU28846.1 hypothetical protein TSUD_21830 [Trifolium subterraneum] 119 4e-29
KYP53274.1 Retrovirus-related Pol polyprotein from transposon TN... 117 1e-28
GAU29466.1 hypothetical protein TSUD_65010 [Trifolium subterraneum] 117 1e-28
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 117 1e-28
GAU49672.1 hypothetical protein TSUD_91100 [Trifolium subterraneum] 117 2e-28
KYP75416.1 Retrovirus-related Pol polyprotein from transposon TN... 112 6e-27
GAU48593.1 hypothetical protein TSUD_179750 [Trifolium subterran... 112 8e-27
KYP61012.1 Retrovirus-related Pol polyprotein from transposon TN... 109 1e-26
GAU50392.1 hypothetical protein TSUD_409430 [Trifolium subterran... 112 1e-26
KYP44418.1 Retrovirus-related Pol polyprotein from transposon TN... 110 2e-26
KYP71160.1 Retrovirus-related Pol polyprotein from transposon TN... 111 2e-26
KYP75335.1 Retrovirus-related Pol polyprotein from transposon TN... 110 3e-26
KYP67039.1 Retrovirus-related Pol polyprotein from transposon TN... 110 3e-26
GAU19074.1 hypothetical protein TSUD_99360 [Trifolium subterraneum] 110 3e-26
KYP61342.1 Retrovirus-related Pol polyprotein from transposon TN... 110 3e-26
KZV44983.1 hypothetical protein F511_32729 [Dorcoceras hygrometr... 108 5e-26
GAU41870.1 hypothetical protein TSUD_366180 [Trifolium subterran... 110 5e-26
AAD21687.1 Strong similarity to gi|3600044 T12H20.12 protease ho... 109 1e-25
XP_016675532.1 PREDICTED: uncharacterized protein LOC107894843 [... 108 1e-25
AAU43956.1 unknown protein [Oryza sativa Japonica Group] AAU4406... 108 1e-25
>GAU28846.1 hypothetical protein TSUD_21830 [Trifolium subterraneum]
Length = 1496
Score = 119 bits (297), Expect = 4e-29
Identities = 55/97 (56%), Positives = 70/97 (72%)
Frame = +2
Query: 2 LFPLFHKSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRSLGSHLTTAGIHHRITCPH 181
++PL KSD FI + ++E QF+ KIK++QTDGGGEFR LT GI HR+TCPH
Sbjct: 644 VYPLKRKSDTLTKFIEFKNMVELQFDCKIKTVQTDGGGEFRPFTKFLTNLGIVHRLTCPH 703
Query: 182 THEQNGGAERKIRHVVNTGLTLLAQSHVPKRYWHYAF 292
TH QNG ERK RH+V TGLTLL+Q+ +P +YW +AF
Sbjct: 704 THHQNGLVERKHRHLVETGLTLLSQAQLPLKYWDHAF 740
>KYP53274.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 839
Score = 117 bits (294), Expect = 1e-28
Identities = 55/97 (56%), Positives = 66/97 (68%)
Frame = +2
Query: 2 LFPLFHKSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRSLGSHLTTAGIHHRITCPH 181
+F L K+ +F A++ QF L IK+IQTD GGEFRS S+L GIHHRI CPH
Sbjct: 243 IFMLKSKAHTLDVFKQFHAMVRNQFQLPIKAIQTDWGGEFRSFTSYLAQHGIHHRIICPH 302
Query: 182 THEQNGGAERKIRHVVNTGLTLLAQSHVPKRYWHYAF 292
TH QNG ERK RH+V GLTLLAQ+H+P +W YAF
Sbjct: 303 THHQNGVVERKHRHIVELGLTLLAQAHLPMHFWDYAF 339
>GAU29466.1 hypothetical protein TSUD_65010 [Trifolium subterraneum]
Length = 1362
Score = 117 bits (294), Expect = 1e-28
Identities = 55/97 (56%), Positives = 68/97 (70%)
Frame = +2
Query: 2 LFPLFHKSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRSLGSHLTTAGIHHRITCPH 181
+FPL KS F N ++++E Q+NL IKS+QTDGGGEFR LT GI HR+TCPH
Sbjct: 626 IFPLKLKSHTLLTFKNFKSMVELQYNLPIKSVQTDGGGEFRPFTQFLTPLGITHRLTCPH 685
Query: 182 THEQNGGAERKIRHVVNTGLTLLAQSHVPKRYWHYAF 292
TH QNG ERK RH+V TGLTLLA + +P +W +AF
Sbjct: 686 THHQNGSVERKHRHIVETGLTLLAHAKLPLHFWDHAF 722
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch AAA57005.1
copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 1439
Score = 117 bits (294), Expect = 1e-28
Identities = 53/97 (54%), Positives = 68/97 (70%)
Frame = +2
Query: 2 LFPLFHKSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRSLGSHLTTAGIHHRITCPH 181
++ L HKSDV F Q L+ER F KI + Q+D GGE+ L +H T GIHH+++CPH
Sbjct: 549 IYLLRHKSDVYKSFCEFQHLVERMFGRKIIAFQSDWGGEYEKLNAHFKTIGIHHQVSCPH 608
Query: 182 THEQNGGAERKIRHVVNTGLTLLAQSHVPKRYWHYAF 292
TH+QNG AERK RH+V GL LLAQS +P +YW +AF
Sbjct: 609 THQQNGAAERKHRHIVEVGLALLAQSSMPLKYWDHAF 645
>GAU49672.1 hypothetical protein TSUD_91100 [Trifolium subterraneum]
Length = 1380
Score = 117 bits (292), Expect = 2e-28
Identities = 52/97 (53%), Positives = 71/97 (73%)
Frame = +2
Query: 2 LFPLFHKSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRSLGSHLTTAGIHHRITCPH 181
++PL KS+ F + ++++E QFN KIK +QTDGGGEF L +LT GI HR+TCPH
Sbjct: 637 VYPLKLKSETLSKFTSFKSMVELQFNCKIKCVQTDGGGEFIPLTKYLTDLGIIHRLTCPH 696
Query: 182 THEQNGGAERKIRHVVNTGLTLLAQSHVPKRYWHYAF 292
TH QNG ERK RH++ TGLTLL+Q+ +P ++W +AF
Sbjct: 697 THHQNGSVERKHRHLIETGLTLLSQAQLPMKFWDHAF 733
>KYP75416.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 785
Score = 112 bits (281), Expect = 6e-27
Identities = 51/97 (52%), Positives = 67/97 (69%)
Frame = +2
Query: 2 LFPLFHKSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRSLGSHLTTAGIHHRITCPH 181
+F L K+ +F A+++ QF L IK+IQTD GGEFRS S+L GI HR+ CPH
Sbjct: 496 IFLLKRKAHTLDVFKQFHAMIQNQFQLPIKAIQTDWGGEFRSFTSYLAQNGIQHRLICPH 555
Query: 182 THEQNGGAERKIRHVVNTGLTLLAQSHVPKRYWHYAF 292
TH QNG ERK RH+V GLT+LAQ+H+P ++W +AF
Sbjct: 556 THHQNGVVERKHRHIVELGLTMLAQAHLPMQFWDHAF 592
>GAU48593.1 hypothetical protein TSUD_179750 [Trifolium subterraneum]
Length = 1364
Score = 112 bits (280), Expect = 8e-27
Identities = 50/97 (51%), Positives = 69/97 (71%)
Frame = +2
Query: 2 LFPLFHKSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRSLGSHLTTAGIHHRITCPH 181
++PL KS+ F ++++E QF KIK ++TDGGGEFR LT G+ HR+TCPH
Sbjct: 521 VYPLKLKSETLTKFTQFKSMIELQFGCKIKVVKTDGGGEFRPFTKFLTELGVIHRLTCPH 580
Query: 182 THEQNGGAERKIRHVVNTGLTLLAQSHVPKRYWHYAF 292
TH QNG ERK RH+V TGLTLL+Q+++P ++W +AF
Sbjct: 581 THHQNGLVERKHRHIVETGLTLLSQANIPLKFWDHAF 617
>KYP61012.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 340
Score = 109 bits (272), Expect = 1e-26
Identities = 49/97 (50%), Positives = 67/97 (69%)
Frame = +2
Query: 2 LFPLFHKSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRSLGSHLTTAGIHHRITCPH 181
++PL K + IF +A++E QFN KIKS+Q+D GGE+R+ S L T GI HR+ CPH
Sbjct: 185 IYPLKSKVETLSIFQQFKAMVELQFNTKIKSVQSDWGGEYRAFTSFLATNGIKHRVICPH 244
Query: 182 THEQNGGAERKIRHVVNTGLTLLAQSHVPKRYWHYAF 292
TH QNG ERK RH+V GLTLL + +P ++W ++F
Sbjct: 245 THHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFSF 281
>GAU50392.1 hypothetical protein TSUD_409430 [Trifolium subterraneum]
Length = 1069
Score = 112 bits (279), Expect = 1e-26
Identities = 53/97 (54%), Positives = 69/97 (71%)
Frame = +2
Query: 2 LFPLFHKSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRSLGSHLTTAGIHHRITCPH 181
++PL KSD FI + ++E QF+ KIK++QTDGGGEFR +LT GI HR T PH
Sbjct: 555 VYPLKLKSDTLTKFIEFKNMVELQFDCKIKTVQTDGGGEFRPFTKYLTNLGIVHRHTYPH 614
Query: 182 THEQNGGAERKIRHVVNTGLTLLAQSHVPKRYWHYAF 292
TH QNG ERK RH+V +GLTLL+Q+ +P +YW +AF
Sbjct: 615 THHQNGLVERKHRHIVESGLTLLSQAQLPLKYWDHAF 651
>KYP44418.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 463
Score = 110 bits (275), Expect = 2e-26
Identities = 51/97 (52%), Positives = 67/97 (69%)
Frame = +2
Query: 2 LFPLFHKSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRSLGSHLTTAGIHHRITCPH 181
++ L KSDV F+N + L+E+QF +KS+QTDGGGEFR L S L GI HR+TCPH
Sbjct: 336 IYLLHRKSDVFSHFLNFKTLVEKQFQTPLKSVQTDGGGEFRPLTSFLQQHGIIHRLTCPH 395
Query: 182 THEQNGGAERKIRHVVNTGLTLLAQSHVPKRYWHYAF 292
TH QNG ER+ RHVV GL +L + +P ++W +AF
Sbjct: 396 THHQNGIVERRHRHVVELGLAMLHHASLPLKFWDHAF 432
>KYP71160.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1268
Score = 111 bits (277), Expect = 2e-26
Identities = 51/97 (52%), Positives = 67/97 (69%)
Frame = +2
Query: 2 LFPLFHKSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRSLGSHLTTAGIHHRITCPH 181
++PL KSD +F +A++E Q N KIKSIQ+D GGE+RS + L T GI HR+ CPH
Sbjct: 511 IYPLKSKSDTLSVFQQFKAMVELQLNTKIKSIQSDWGGEYRSFTAFLATHGITHRLICPH 570
Query: 182 THEQNGGAERKIRHVVNTGLTLLAQSHVPKRYWHYAF 292
TH QNG ERK RH+V+ G+TLL + +P +W YAF
Sbjct: 571 THHQNGVVERKHRHIVDIGITLLHHASLPLTFWDYAF 607
>KYP75335.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 537
Score = 110 bits (275), Expect = 3e-26
Identities = 50/97 (51%), Positives = 66/97 (68%)
Frame = +2
Query: 2 LFPLFHKSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRSLGSHLTTAGIHHRITCPH 181
+F K+ +F A+++ QF L IK+IQTD GGEFRS S+L GI HR+ CPH
Sbjct: 132 IFLFKSKAHTLDVFKQFHAMIQNQFQLPIKAIQTDWGGEFRSFTSYLAQNGIQHRLICPH 191
Query: 182 THEQNGGAERKIRHVVNTGLTLLAQSHVPKRYWHYAF 292
TH QNG ERK RH+V GLT+LAQ+H+P ++W +AF
Sbjct: 192 THHQNGIVERKHRHIVELGLTMLAQAHLPMQFWDHAF 228
>KYP67039.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1279
Score = 110 bits (276), Expect = 3e-26
Identities = 49/97 (50%), Positives = 67/97 (69%)
Frame = +2
Query: 2 LFPLFHKSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRSLGSHLTTAGIHHRITCPH 181
++PL K++ +F +A+ E QFN KIKS+Q+D GGE+R+ S L T GI HR+ CPH
Sbjct: 455 IYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQSDWGGEYRAFTSFLATNGIQHRVICPH 514
Query: 182 THEQNGGAERKIRHVVNTGLTLLAQSHVPKRYWHYAF 292
TH QNG ERK RH+V GLTLL + +P ++W +AF
Sbjct: 515 THHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFAF 551
>GAU19074.1 hypothetical protein TSUD_99360 [Trifolium subterraneum]
Length = 1329
Score = 110 bits (276), Expect = 3e-26
Identities = 50/97 (51%), Positives = 68/97 (70%)
Frame = +2
Query: 2 LFPLFHKSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRSLGSHLTTAGIHHRITCPH 181
++PL KS+ F ++++E QF KIK +QTDGGGEFR L G+ HR+TCPH
Sbjct: 576 VYPLKLKSETLTKFTQFKSMIELQFGCKIKVVQTDGGGEFRPFTKFLIELGVIHRLTCPH 635
Query: 182 THEQNGGAERKIRHVVNTGLTLLAQSHVPKRYWHYAF 292
TH QNG ERK RH+V TGLTLL+Q+++P ++W +AF
Sbjct: 636 THHQNGLVERKHRHLVETGLTLLSQANIPLKFWDHAF 672
>KYP61342.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1358
Score = 110 bits (276), Expect = 3e-26
Identities = 49/97 (50%), Positives = 67/97 (69%)
Frame = +2
Query: 2 LFPLFHKSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRSLGSHLTTAGIHHRITCPH 181
++PL K++ +F +A+ E QFN KIKS+Q+D GGE+R+ S L T GI HR+ CPH
Sbjct: 534 IYPLKSKAETLSVFQQFKAMAELQFNTKIKSVQSDWGGEYRAFTSFLATNGIQHRVICPH 593
Query: 182 THEQNGGAERKIRHVVNTGLTLLAQSHVPKRYWHYAF 292
TH QNG ERK RH+V GLTLL + +P ++W +AF
Sbjct: 594 THHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFAF 630
>KZV44983.1 hypothetical protein F511_32729 [Dorcoceras hygrometricum]
Length = 372
Score = 108 bits (269), Expect = 5e-26
Identities = 54/91 (59%), Positives = 65/91 (71%)
Frame = +2
Query: 20 KSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRSLGSHLTTAGIHHRITCPHTHEQNG 199
K +V IF ++L+E QFN +IK++QTD GGEFRSL S L GI HR+TCPHT EQNG
Sbjct: 214 KFEVPRIFETFKSLVELQFNKRIKNLQTDWGGEFRSLTSFLQEHGIQHRVTCPHTSEQNG 273
Query: 200 GAERKIRHVVNTGLTLLAQSHVPKRYWHYAF 292
ERK RHVV GLTLLA + +P R+W AF
Sbjct: 274 VVERKHRHVVEIGLTLLAHASMPLRFWPDAF 304
>GAU41870.1 hypothetical protein TSUD_366180 [Trifolium subterraneum]
Length = 1276
Score = 110 bits (274), Expect = 5e-26
Identities = 49/97 (50%), Positives = 70/97 (72%)
Frame = +2
Query: 2 LFPLFHKSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRSLGSHLTTAGIHHRITCPH 181
++PL KS+ F + ++++E +F KIK +QT+GGGEFR LT G+ HR+TCPH
Sbjct: 540 VYPLKLKSETLTKFTHFKSMVELEFGCKIKVVQTNGGGEFRPFTKFLTELGVIHRLTCPH 599
Query: 182 THEQNGGAERKIRHVVNTGLTLLAQSHVPKRYWHYAF 292
TH QNG ERK RH+V TGLTLL+Q+++P ++W +AF
Sbjct: 600 THHQNGLVERKHRHLVETGLTLLSQANIPLKFWDHAF 636
>AAD21687.1 Strong similarity to gi|3600044 T12H20.12 protease homolog from
Arabidopsis thaliana BAC gb|AF080119 and is a member of
the reverse transcriptase family PF|00078 [Arabidopsis
thaliana]
Length = 1415
Score = 109 bits (272), Expect = 1e-25
Identities = 52/98 (53%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
Frame = +2
Query: 5 FPLFHKSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRS--LGSHLTTAGIHHRITCP 178
+PL +KS+ +FI+ Q L+E Q N KIK Q+DGGGEF S L +HL+ GIHHRI+CP
Sbjct: 548 YPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHRISCP 607
Query: 179 HTHEQNGGAERKIRHVVNTGLTLLAQSHVPKRYWHYAF 292
+T +QNG AERK RH+V GL++L SH P+++W +F
Sbjct: 608 YTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESF 645
>XP_016675532.1 PREDICTED: uncharacterized protein LOC107894843 [Gossypium
hirsutum]
Length = 470
Score = 108 bits (269), Expect = 1e-25
Identities = 51/97 (52%), Positives = 66/97 (68%)
Frame = +2
Query: 2 LFPLFHKSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRSLGSHLTTAGIHHRITCPH 181
++ L KS F+ Q ++ QF +IK Q+D GGEFR+ S L GI HR++CPH
Sbjct: 323 VYLLKRKSQALDCFLQFQQMIATQFGKRIKKFQSDWGGEFRAFASVLADQGILHRLSCPH 382
Query: 182 THEQNGGAERKIRHVVNTGLTLLAQSHVPKRYWHYAF 292
T EQNG AERK RH+V TGLTLLAQ+++P +YW YAF
Sbjct: 383 TSEQNGVAERKHRHIVETGLTLLAQANLPLKYWGYAF 419
>AAU43956.1 unknown protein [Oryza sativa Japonica Group] AAU44069.1 putative
polyprotein [Oryza sativa Japonica Group]
Length = 1447
Score = 108 bits (271), Expect = 1e-25
Identities = 52/98 (53%), Positives = 68/98 (69%)
Frame = +2
Query: 2 LFPLFHKSDVRGIFINLQALLERQFNLKIKSIQTDGGGEFRSLGSHLTTAGIHHRITCPH 181
L+ + HKS+V F QAL+ER FN KI ++Q+D GGE+ L S T GI H ++CPH
Sbjct: 549 LYLIKHKSEVIQKFHEFQALVERLFNRKIIAMQSDWGGEYEKLHSFFTKIGITHHVSCPH 608
Query: 182 THEQNGGAERKIRHVVNTGLTLLAQSHVPKRYWHYAFE 295
TH+QNG AERK RH+V GLTLLA S +P ++W AF+
Sbjct: 609 THQQNGSAERKHRHIVEVGLTLLAYSSMPLKFWDEAFQ 646