BLASTX nr result

ID: Alisma22_contig00040102 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00040102
         (321 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006850962.1 PREDICTED: probable pre-mRNA-splicing factor ATP-...    73   9e-13
XP_009381035.1 PREDICTED: probable pre-mRNA-splicing factor ATP-...    72   2e-12
OMO53132.1 hypothetical protein CCACVL1_28867 [Corchorus capsula...    69   2e-11
XP_008348576.1 PREDICTED: probable pre-mRNA-splicing factor ATP-...    69   2e-11
CAN82460.1 hypothetical protein VITISV_005515 [Vitis vinifera]         69   2e-11
XP_008342761.1 PREDICTED: probable pre-mRNA-splicing factor ATP-...    69   2e-11
XP_010653118.1 PREDICTED: probable pre-mRNA-splicing factor ATP-...    69   2e-11
XP_010926652.1 PREDICTED: probable pre-mRNA-splicing factor ATP-...    69   3e-11
XP_010926650.1 PREDICTED: probable pre-mRNA-splicing factor ATP-...    69   3e-11
XP_010063603.1 PREDICTED: probable pre-mRNA-splicing factor ATP-...    68   4e-11
XP_019173485.1 PREDICTED: probable pre-mRNA-splicing factor ATP-...    64   4e-11
XP_008358137.1 PREDICTED: LOW QUALITY PROTEIN: probable pre-mRNA...    68   5e-11
XP_010272472.1 PREDICTED: probable pre-mRNA-splicing factor ATP-...    68   5e-11
OMO64507.1 hypothetical protein COLO4_32032 [Corchorus olitorius]      67   6e-11
XP_015884789.1 PREDICTED: probable pre-mRNA-splicing factor ATP-...    67   7e-11
XP_016717521.1 PREDICTED: probable pre-mRNA-splicing factor ATP-...    67   7e-11
XP_012454952.1 PREDICTED: probable pre-mRNA-splicing factor ATP-...    67   7e-11
GAU26869.1 hypothetical protein TSUD_02710 [Trifolium subterraneum]    67   7e-11
XP_017649101.1 PREDICTED: probable pre-mRNA-splicing factor ATP-...    67   7e-11
XP_004499233.1 PREDICTED: probable pre-mRNA-splicing factor ATP-...    67   7e-11

>XP_006850962.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase [Amborella trichopoda] ERN12543.1 hypothetical
           protein AMTR_s00025p00202360 [Amborella trichopoda]
          Length = 1202

 Score = 72.8 bits (177), Expect = 9e-13
 Identities = 36/54 (66%), Positives = 45/54 (83%)
 Frame = -3

Query: 184 ISAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYRA 23
           ++A  VVKR QEVFVKVIS+SG++L LSMRDVDQ +G+DL PM+ S ED+ YRA
Sbjct: 290 VNAKDVVKRDQEVFVKVISVSGQKLSLSMRDVDQKTGQDLLPMKKSSEDDAYRA 343


>XP_009381035.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase DEAH5 [Musa acuminata subsp. malaccensis]
          Length = 1181

 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 36/53 (67%), Positives = 44/53 (83%)
 Frame = -3

Query: 181 SAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYRA 23
           +A  VVKR QEV+VKVIS+SG++L LSMRDVDQ +G+DL PM+ S EDE YRA
Sbjct: 270 NAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQKTGKDLLPMKKSSEDEAYRA 322


>OMO53132.1 hypothetical protein CCACVL1_28867 [Corchorus capsularis]
          Length = 385

 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 34/53 (64%), Positives = 45/53 (84%)
 Frame = -3

Query: 181 SAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYRA 23
           SA  VVKR QEV+VKVISISG++L LSMRDVDQ++G+DL P++ S +D+ +RA
Sbjct: 173 SAKDVVKRDQEVYVKVISISGQKLSLSMRDVDQNTGKDLLPLKKSSDDDAFRA 225


>XP_008348576.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase DEAH5 [Malus domestica]
          Length = 1062

 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 34/52 (65%), Positives = 43/52 (82%)
 Frame = -3

Query: 181 SAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYR 26
           +A  VVKR QEV+VKVIS+SG++L LSMRDVDQ SG+DL P++ S ED+ YR
Sbjct: 151 NAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKSSEDDAYR 202


>CAN82460.1 hypothetical protein VITISV_005515 [Vitis vinifera]
          Length = 1162

 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 34/52 (65%), Positives = 44/52 (84%)
 Frame = -3

Query: 181 SAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYR 26
           +A  VVKR QEV+VKVIS+SG++L LSMRDVDQ++GRDL P++ SLED+  R
Sbjct: 273 NAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGRDLIPLKKSLEDDALR 324


>XP_008342761.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase DEAH5 [Malus domestica] XP_008362402.1
           PREDICTED: probable pre-mRNA-splicing factor
           ATP-dependent RNA helicase DEAH5 [Malus domestica]
          Length = 1215

 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 34/52 (65%), Positives = 43/52 (82%)
 Frame = -3

Query: 181 SAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYR 26
           +A  VVKR QEV+VKVIS+SG++L LSMRDVDQ SG+DL P++ S ED+ YR
Sbjct: 304 NAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKSSEDDAYR 355


>XP_010653118.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase DEAH5 [Vitis vinifera]
          Length = 1219

 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 34/52 (65%), Positives = 44/52 (84%)
 Frame = -3

Query: 181 SAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYR 26
           +A  VVKR QEV+VKVIS+SG++L LSMRDVDQ++GRDL P++ SLED+  R
Sbjct: 308 NAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGRDLIPLKKSLEDDALR 359


>XP_010926652.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase DEAH5 isoform X2 [Elaeis guineensis]
          Length = 1032

 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 35/53 (66%), Positives = 42/53 (79%)
 Frame = -3

Query: 181 SAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYRA 23
           +A   VKR QEVFVKVIS+SG++L LSMRDVDQ +G+DL PMR + EDE  RA
Sbjct: 279 NAKDAVKRDQEVFVKVISVSGQKLSLSMRDVDQKTGKDLLPMRKNSEDEALRA 331


>XP_010926650.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase DEAH5 isoform X1 [Elaeis guineensis]
          Length = 1190

 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 35/53 (66%), Positives = 42/53 (79%)
 Frame = -3

Query: 181 SAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYRA 23
           +A   VKR QEVFVKVIS+SG++L LSMRDVDQ +G+DL PMR + EDE  RA
Sbjct: 279 NAKDAVKRDQEVFVKVISVSGQKLSLSMRDVDQKTGKDLLPMRKNSEDEALRA 331


>XP_010063603.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase DEAH5 [Eucalyptus grandis] KCW70837.1
           hypothetical protein EUGRSUZ_F03979 [Eucalyptus grandis]
           KCW70838.1 hypothetical protein EUGRSUZ_F03979
           [Eucalyptus grandis]
          Length = 1196

 Score = 68.2 bits (165), Expect = 4e-11
 Identities = 34/53 (64%), Positives = 44/53 (83%)
 Frame = -3

Query: 181 SAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYRA 23
           +A  VVKR QEV+VKVISISG++L LSMRDVDQ +G+DL P++ S +D+ YRA
Sbjct: 284 NAKDVVKRDQEVYVKVISISGQKLSLSMRDVDQDTGKDLLPLKKSDDDDAYRA 336


>XP_019173485.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase DEAH5, partial [Ipomoea nil]
          Length = 105

 Score = 63.9 bits (154), Expect = 4e-11
 Identities = 30/52 (57%), Positives = 44/52 (84%)
 Frame = -3

Query: 181 SAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYR 26
           +A  +VKR +EV+VKVIS+SG++L LSMRDVDQ++G+DL P++ SL+D+  R
Sbjct: 31  NAKDLVKRDEEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKSLDDDGLR 82


>XP_008358137.1 PREDICTED: LOW QUALITY PROTEIN: probable pre-mRNA-splicing factor
           ATP-dependent RNA helicase DEAH5 [Malus domestica]
          Length = 1200

 Score = 67.8 bits (164), Expect = 5e-11
 Identities = 33/55 (60%), Positives = 44/55 (80%)
 Frame = -3

Query: 181 SAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYRAKL 17
           +A  VVKR QEV+VKVIS+SG++L LSMRDVDQ SG+DL P++ S ED+ +R  +
Sbjct: 289 NAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKSSEDDAHRTNM 343


>XP_010272472.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase DEAH5 [Nelumbo nucifera]
          Length = 1215

 Score = 67.8 bits (164), Expect = 5e-11
 Identities = 33/53 (62%), Positives = 45/53 (84%)
 Frame = -3

Query: 181 SAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYRA 23
           +A +VVKR QEVFVKVIS+SG+++ LSMRDVDQ++G+DL PM+ S +D+  RA
Sbjct: 304 NAKEVVKRDQEVFVKVISMSGQKMSLSMRDVDQNTGKDLLPMKKSTDDDALRA 356


>OMO64507.1 hypothetical protein COLO4_32032 [Corchorus olitorius]
          Length = 468

 Score = 67.4 bits (163), Expect = 6e-11
 Identities = 33/52 (63%), Positives = 44/52 (84%)
 Frame = -3

Query: 181 SAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYR 26
           SA  VVKR QEV+VKVISISG++L LSMRDVDQ++G+DL P++ S +D+ +R
Sbjct: 173 SAKDVVKRDQEVYVKVISISGQKLSLSMRDVDQNTGKDLLPLKKSSDDDAFR 224


>XP_015884789.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase DEAH5 [Ziziphus jujuba]
          Length = 915

 Score = 67.4 bits (163), Expect = 7e-11
 Identities = 33/52 (63%), Positives = 44/52 (84%)
 Frame = -3

Query: 181 SAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYR 26
           +A  VVKR QEV+VKVISISG++L LSMRDVDQ++G+DL P++ S ED+ +R
Sbjct: 294 NAKDVVKRDQEVYVKVISISGQKLSLSMRDVDQNTGKDLLPLKKSSEDDAFR 345


>XP_016717521.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase DEAH5 [Gossypium hirsutum]
          Length = 1180

 Score = 67.4 bits (163), Expect = 7e-11
 Identities = 33/52 (63%), Positives = 44/52 (84%)
 Frame = -3

Query: 181 SAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYR 26
           +A  VVKR QEV+VKVISISG++L LSMRDVDQ++GRDL P++ S +D+ +R
Sbjct: 269 NAKDVVKRDQEVYVKVISISGQKLSLSMRDVDQNTGRDLLPLKKSSDDDAFR 320


>XP_012454952.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase [Gossypium raimondii] KJB69140.1 hypothetical
           protein B456_011G007600 [Gossypium raimondii]
          Length = 1184

 Score = 67.4 bits (163), Expect = 7e-11
 Identities = 33/52 (63%), Positives = 44/52 (84%)
 Frame = -3

Query: 181 SAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYR 26
           +A  VVKR QEV+VKVISISG++L LSMRDVDQ++GRDL P++ S +D+ +R
Sbjct: 273 NAKDVVKRDQEVYVKVISISGQKLSLSMRDVDQNTGRDLLPLKKSSDDDAFR 324


>GAU26869.1 hypothetical protein TSUD_02710 [Trifolium subterraneum]
          Length = 1185

 Score = 67.4 bits (163), Expect = 7e-11
 Identities = 32/53 (60%), Positives = 44/53 (83%)
 Frame = -3

Query: 184 ISAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYR 26
           ++A +VVKR Q+V+VKVIS+SG +L LSMRDVDQ SG+DL P++ S E+E +R
Sbjct: 281 VNAKEVVKRDQQVYVKVISVSGSKLSLSMRDVDQHSGKDLLPLKKSSEEETFR 333


>XP_017649101.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase DEAH5 [Gossypium arboreum]
          Length = 1186

 Score = 67.4 bits (163), Expect = 7e-11
 Identities = 33/52 (63%), Positives = 44/52 (84%)
 Frame = -3

Query: 181 SAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYR 26
           +A  VVKR QEV+VKVISISG++L LSMRDVDQ++GRDL P++ S +D+ +R
Sbjct: 275 NAKDVVKRDQEVYVKVISISGQKLSLSMRDVDQNTGRDLLPLKKSSDDDSFR 326


>XP_004499233.1 PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase [Cicer arietinum]
          Length = 1203

 Score = 67.4 bits (163), Expect = 7e-11
 Identities = 33/52 (63%), Positives = 43/52 (82%)
 Frame = -3

Query: 181 SAGKVVKRGQEVFVKVISISGKQLRLSMRDVDQSSGRDLSPMRGSLEDEFYR 26
           +A +VVKR QEV+VKVIS+SG +L LSMRDVDQ SG+DL P++ S E+E +R
Sbjct: 292 NAKEVVKRDQEVYVKVISVSGSKLSLSMRDVDQHSGKDLLPLKKSSEEEAFR 343


Top